AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033584


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033584.t1 MTR_7g081710 96.296 351 13 0 1 351 1 351 0.0 711
MS.gene033584.t1 MTR_1g048940 48.295 352 176 4 3 351 2 350 1.74e-122 357
MS.gene033584.t1 MTR_1g062110 41.908 346 188 5 17 351 30 373 5.59e-93 282
MS.gene033584.t1 MTR_7g102820 40.000 345 187 6 25 351 38 380 3.95e-88 270
MS.gene033584.t1 MTR_8g024120 38.110 328 200 3 25 351 18 343 2.55e-79 246
MS.gene033584.t1 MTR_3g092890 37.576 330 198 4 23 350 13 336 6.43e-73 229
MS.gene033584.t1 MTR_1g070080 36.825 315 194 5 21 333 10 321 1.42e-68 219
MS.gene033584.t1 MTR_7g068650 37.202 336 189 8 16 335 17 346 1.67e-67 216
MS.gene033584.t1 MTR_1g070135 36.452 310 191 6 24 331 14 319 1.88e-67 216
MS.gene033584.t1 MTR_1g062110 41.577 279 149 6 6 272 18 294 3.67e-67 214
MS.gene033584.t1 MTR_1g070120 36.508 315 190 7 21 331 11 319 4.64e-67 214
MS.gene033584.t1 MTR_1g070085 35.987 314 196 5 21 332 10 320 5.19e-67 214
MS.gene033584.t1 MTR_1g070085 35.987 314 196 5 21 332 10 320 5.19e-67 214
MS.gene033584.t1 MTR_5g065010 33.143 350 216 8 11 351 2 342 1.84e-66 213
MS.gene033584.t1 MTR_3g063180 35.072 345 211 7 16 351 12 352 6.54e-64 207
MS.gene033584.t1 MTR_3g091360 36.218 312 187 7 45 350 48 353 5.30e-60 197
MS.gene033584.t1 MTR_4g015790 34.018 341 202 7 16 335 16 354 3.47e-59 195
MS.gene033584.t1 MTR_5g082750 34.911 338 209 7 6 335 6 340 6.64e-59 194
MS.gene033584.t1 MTR_3g091350 36.102 313 186 8 45 350 55 360 8.50e-59 194
MS.gene033584.t1 MTR_5g032870 36.656 311 189 7 29 333 19 327 5.20e-58 191
MS.gene033584.t1 MTR_4g093840 33.994 353 215 11 11 351 20 366 2.68e-57 190
MS.gene033584.t1 MTR_5g032880 35.873 315 188 7 29 338 19 324 1.00e-56 196
MS.gene033584.t1 MTR_5g032880 37.025 316 191 7 24 333 352 665 2.21e-56 195
MS.gene033584.t1 MTR_3g070860 33.429 347 212 9 1 335 2 341 2.89e-56 187
MS.gene033584.t1 MTR_2g437380 33.333 339 206 9 24 351 27 356 4.22e-56 187
MS.gene033584.t1 MTR_0009s0480 32.471 348 215 9 13 351 11 347 6.05e-56 186
MS.gene033584.t1 MTR_7g105070 32.059 340 222 5 17 351 27 362 1.41e-55 186
MS.gene033584.t1 MTR_5g059130 33.846 325 195 7 18 332 13 327 2.05e-54 182
MS.gene033584.t1 MTR_5g048740 29.545 352 237 8 5 351 2 347 2.52e-54 182
MS.gene033584.t1 MTR_1g070135 38.247 251 149 6 24 272 14 260 2.56e-54 180
MS.gene033584.t1 MTR_5g048470 29.360 344 233 8 13 351 17 355 1.43e-52 177
MS.gene033584.t1 MTR_0328s0030 31.195 343 226 7 13 351 10 346 2.09e-52 177
MS.gene033584.t1 MTR_8g064200 28.863 343 235 8 13 351 22 359 2.36e-52 177
MS.gene033584.t1 MTR_8g064200 28.863 343 235 8 13 351 17 354 2.55e-52 177
MS.gene033584.t1 MTR_1g033810 31.118 331 216 6 8 331 5 330 1.26e-51 175
MS.gene033584.t1 MTR_7g062570 32.390 318 198 8 23 332 29 337 1.66e-51 175
MS.gene033584.t1 MTR_8g075830 31.288 326 217 6 24 345 15 337 1.81e-51 175
MS.gene033584.t1 MTR_5g059140 34.416 308 184 7 23 320 16 315 4.36e-51 173
MS.gene033584.t1 MTR_2g072890 30.347 346 228 8 13 351 16 355 4.42e-51 174
MS.gene033584.t1 MTR_6g015950 35.238 315 189 7 23 331 14 319 6.20e-51 173
MS.gene033584.t1 MTR_8g075890 31.288 326 217 6 24 345 15 337 1.55e-50 172
MS.gene033584.t1 MTR_7g016090 31.098 328 214 6 23 348 14 331 3.60e-50 171
MS.gene033584.t1 MTR_7g016090 31.098 328 214 6 23 348 16 333 4.16e-50 171
MS.gene033584.t1 MTR_3g026150 31.025 361 218 9 6 351 16 360 4.71e-50 171
MS.gene033584.t1 MTR_3g058610 32.226 301 198 6 49 345 39 337 6.55e-50 171
MS.gene033584.t1 MTR_5g055800 30.747 348 220 9 13 351 12 347 7.66e-50 170
MS.gene033584.t1 MTR_5g022020 30.357 336 225 7 9 340 2 332 1.24e-49 170
MS.gene033584.t1 MTR_3g072810 34.557 327 195 10 16 331 8 326 1.38e-49 169
MS.gene033584.t1 MTR_5g055900 29.070 344 232 7 13 351 12 348 4.70e-49 168
MS.gene033584.t1 MTR_1g070085 34.568 243 156 3 92 332 1 242 1.10e-48 165
MS.gene033584.t1 MTR_5g055690 28.947 342 236 5 13 351 12 349 1.39e-48 167
MS.gene033584.t1 MTR_2g072910 28.242 347 233 6 13 351 16 354 1.49e-48 167
MS.gene033584.t1 MTR_5g048570 29.360 344 229 8 13 351 12 346 5.97e-48 165
MS.gene033584.t1 MTR_2g069190 29.651 344 227 6 16 351 35 371 9.44e-48 165
MS.gene033584.t1 MTR_2g069090 29.446 343 230 6 16 351 35 372 1.05e-47 165
MS.gene033584.t1 MTR_7g062580 29.042 334 222 7 25 351 31 356 1.05e-47 165
MS.gene033584.t1 MTR_5g048550 28.488 344 234 7 13 351 12 348 1.22e-47 164
MS.gene033584.t1 MTR_5g055680 28.824 340 230 7 17 351 16 348 1.30e-47 164
MS.gene033584.t1 MTR_7g062550 32.911 316 195 8 25 332 36 342 5.94e-47 163
MS.gene033584.t1 MTR_1g093110 32.716 324 197 7 22 332 40 355 6.00e-47 163
MS.gene033584.t1 MTR_5g055820 29.248 359 236 10 1 351 1 349 1.01e-46 162
MS.gene033584.t1 MTR_7g062600 31.546 317 199 9 25 332 27 334 1.10e-46 162
MS.gene033584.t1 MTR_7g016080 33.123 317 194 7 23 335 14 316 1.18e-46 161
MS.gene033584.t1 MTR_0009s0050 28.696 345 232 8 13 351 12 348 1.82e-46 161
MS.gene033584.t1 MTR_0009s0050 28.696 345 232 8 13 351 12 348 1.98e-46 162
MS.gene033584.t1 MTR_7g063730 34.014 294 177 8 47 332 62 346 2.22e-46 162
MS.gene033584.t1 MTR_1g070100 34.177 237 153 3 98 332 3 238 4.12e-46 158
MS.gene033584.t1 MTR_5g011250 30.303 330 216 8 16 332 10 338 5.03e-46 160
MS.gene033584.t1 MTR_3g072820 31.307 329 213 8 8 331 4 324 5.11e-46 160
MS.gene033584.t1 MTR_5g048850 28.779 344 233 7 13 351 12 348 5.50e-46 160
MS.gene033584.t1 MTR_2g068840 31.003 329 207 9 16 333 24 343 2.35e-45 159
MS.gene033584.t1 MTR_1g070185 32.277 347 221 6 10 351 30 367 2.46e-45 159
MS.gene033584.t1 MTR_8g009080 32.407 324 208 6 17 334 62 380 5.59e-45 159
MS.gene033584.t1 MTR_8g074050 32.500 280 183 5 49 324 52 329 1.34e-44 157
MS.gene033584.t1 MTR_1g093140 31.325 332 203 8 18 332 36 359 1.83e-44 157
MS.gene033584.t1 MTR_2g437380 33.835 266 166 5 92 351 1 262 6.00e-44 152
MS.gene033584.t1 MTR_2g069210 28.947 342 232 6 16 351 31 367 6.66e-44 155
MS.gene033584.t1 MTR_2g069010 31.686 344 211 10 10 338 29 363 1.40e-43 154
MS.gene033584.t1 MTR_8g009160 29.268 328 215 7 16 335 30 348 3.55e-43 153
MS.gene033584.t1 MTR_2g102570 31.438 299 178 7 47 332 50 334 8.89e-43 152
MS.gene033584.t1 MTR_4g116010 30.968 310 196 9 49 351 50 348 1.16e-42 151
MS.gene033584.t1 MTR_4g087090 30.088 339 215 8 29 351 12 344 1.46e-42 151
MS.gene033584.t1 MTR_1g034120 32.326 331 196 8 25 332 4 329 2.41e-42 150
MS.gene033584.t1 MTR_3g088565 32.787 305 166 9 48 332 2 287 3.82e-42 149
MS.gene033584.t1 MTR_2g069300 29.697 330 220 6 12 334 17 341 3.89e-42 150
MS.gene033584.t1 MTR_8g074070 32.500 280 183 5 49 324 52 329 4.22e-42 150
MS.gene033584.t1 MTR_3g117420 28.929 280 193 5 49 324 52 329 1.59e-41 149
MS.gene033584.t1 MTR_0032s0040 30.539 334 210 9 16 334 30 356 1.71e-41 149
MS.gene033584.t1 MTR_2g068950 30.321 343 209 9 10 334 23 353 2.52e-41 148
MS.gene033584.t1 MTR_3g043900 31.077 325 210 8 17 335 21 337 2.92e-41 148
MS.gene033584.t1 MTR_8g062600 29.513 349 221 9 17 351 36 373 3.45e-41 148
MS.gene033584.t1 MTR_1g093120 30.746 335 212 8 10 332 25 351 4.52e-41 148
MS.gene033584.t1 MTR_2g068960 29.794 339 216 7 10 334 23 353 5.81e-41 147
MS.gene033584.t1 MTR_1g034060 31.722 331 198 8 25 332 4 329 1.06e-40 146
MS.gene033584.t1 MTR_4g024660 28.198 344 234 6 16 351 35 373 1.13e-40 147
MS.gene033584.t1 MTR_7g029655 29.326 341 210 9 16 339 30 356 1.66e-40 146
MS.gene033584.t1 MTR_3g083370 31.959 291 181 8 48 332 3 282 1.80e-40 145
MS.gene033584.t1 MTR_1g043760 30.088 339 220 8 16 345 22 352 2.92e-40 145
MS.gene033584.t1 MTR_2g069020 29.912 341 224 8 10 341 27 361 9.99e-40 144
MS.gene033584.t1 MTR_8g063070 30.982 326 208 7 17 332 36 354 1.12e-39 144
MS.gene033584.t1 MTR_3g045230 30.675 326 213 7 16 335 20 338 1.47e-39 143
MS.gene033584.t1 MTR_2g069020 29.912 341 224 8 10 341 27 361 1.50e-39 144
MS.gene033584.t1 MTR_7g045650 31.615 291 188 6 25 310 36 320 1.89e-39 142
MS.gene033584.t1 MTR_1g043770 30.312 320 199 8 17 325 23 329 2.25e-39 143
MS.gene033584.t1 MTR_8g028435 28.963 328 216 9 16 335 30 348 2.47e-39 143
MS.gene033584.t1 MTR_8g009090 28.354 328 218 7 16 335 30 348 3.31e-39 142
MS.gene033584.t1 MTR_1g034140 31.157 337 208 7 22 342 1 329 3.34e-39 142
MS.gene033584.t1 MTR_8g009170 27.301 326 223 7 16 334 30 348 5.34e-39 142
MS.gene033584.t1 MTR_4g087140 29.429 333 208 9 22 332 1 328 5.70e-39 142
MS.gene033584.t1 MTR_4g087100 31.148 305 186 6 49 332 26 327 1.18e-38 141
MS.gene033584.t1 MTR_8g008930 28.267 329 218 8 16 335 30 349 1.77e-38 140
MS.gene033584.t1 MTR_8g009110 27.523 327 223 7 16 335 30 349 3.29e-38 140
MS.gene033584.t1 MTR_1g032250 29.969 327 201 9 19 332 42 353 4.15e-38 140
MS.gene033584.t1 MTR_7g056347 29.310 348 225 8 16 351 35 373 5.10e-38 140
MS.gene033584.t1 MTR_8g074070 32.616 279 165 7 49 324 52 310 7.99e-38 138
MS.gene033584.t1 MTR_7g062560 31.487 343 194 14 24 351 37 353 1.52e-37 138
MS.gene033584.t1 MTR_4g087110 30.820 305 187 7 49 332 26 327 1.62e-37 138
MS.gene033584.t1 MTR_7g078010 32.209 326 204 5 17 332 36 354 1.84e-37 138
MS.gene033584.t1 MTR_0009s0480 32.342 269 162 9 13 272 11 268 2.44e-37 135
MS.gene033584.t1 MTR_1g102070 33.333 270 171 4 73 334 85 353 2.58e-37 138
MS.gene033584.t1 MTR_1g032140 29.412 340 228 8 16 350 32 364 3.65e-37 137
MS.gene033584.t1 MTR_2g025120 29.492 295 189 9 48 334 3 286 7.63e-37 135
MS.gene033584.t1 MTR_5g085330 31.667 300 184 8 48 337 4 292 8.83e-37 135
MS.gene033584.t1 MTR_3g026150 32.374 278 158 8 10 272 20 282 1.09e-36 134
MS.gene033584.t1 MTR_3g026150 32.422 256 161 6 102 351 8 257 1.25e-36 133
MS.gene033584.t1 MTR_1g043810 30.124 322 211 9 17 331 23 337 1.32e-36 135
MS.gene033584.t1 MTR_8g041620 28.696 345 232 6 16 351 35 374 1.75e-36 135
MS.gene033584.t1 MTR_4g117880 27.744 328 221 8 12 331 26 345 2.28e-36 135
MS.gene033584.t1 MTR_1g032220 28.614 339 204 10 12 332 35 353 3.04e-36 135
MS.gene033584.t1 MTR_4g119410 29.769 346 226 5 16 351 35 373 3.26e-36 135
MS.gene033584.t1 MTR_4g087120 29.508 305 191 5 49 332 26 327 3.96e-36 134
MS.gene033584.t1 MTR_2g068800 31.769 277 158 6 16 285 24 276 4.64e-36 132
MS.gene033584.t1 MTR_1g043775 31.014 345 203 11 16 343 22 348 5.32e-36 134
MS.gene033584.t1 MTR_2g069060 29.730 296 197 6 39 331 43 330 9.48e-36 133
MS.gene033584.t1 MTR_8g041600 27.826 345 235 6 16 351 35 374 1.15e-35 134
MS.gene033584.t1 MTR_8g009120 25.915 328 223 6 12 335 26 337 1.33e-35 133
MS.gene033584.t1 MTR_7g056393 29.379 354 229 6 10 351 29 373 2.54e-35 132
MS.gene033584.t1 MTR_3g096500 32.781 302 178 8 50 334 67 360 9.29e-35 131
MS.gene033584.t1 MTR_1g081840 31.457 302 182 7 50 334 54 347 3.36e-34 129
MS.gene033584.t1 MTR_7g102720 31.597 288 187 6 48 332 36 316 3.73e-34 128
MS.gene033584.t1 MTR_8g006930 28.902 346 229 5 16 351 35 373 4.80e-34 129
MS.gene033584.t1 MTR_6g464620 29.231 325 208 9 24 334 42 358 4.97e-34 129
MS.gene033584.t1 MTR_0056s0160 29.500 200 138 2 154 351 35 233 5.14e-34 125
MS.gene033584.t1 MTR_1g070110 31.967 244 133 4 92 333 4 216 6.82e-34 125
MS.gene033584.t1 MTR_3g117485 28.671 286 189 8 49 324 49 329 1.03e-33 127
MS.gene033584.t1 MTR_5g055690 30.798 263 175 5 13 272 12 270 5.03e-33 124
MS.gene033584.t1 MTR_4g087130 31.333 300 189 7 49 331 26 325 5.41e-33 126
MS.gene033584.t1 MTR_1g027290 27.900 319 205 8 49 351 29 338 8.18e-33 125
MS.gene033584.t1 MTR_3g117485 30.078 256 166 7 77 324 7 257 2.86e-32 122
MS.gene033584.t1 MTR_7g451860 30.796 289 181 7 49 331 41 316 3.82e-32 123
MS.gene033584.t1 MTR_7g047670 30.796 289 181 7 49 331 41 316 3.82e-32 123
MS.gene033584.t1 MTR_1g011580 26.280 293 193 7 47 332 61 337 4.26e-32 123
MS.gene033584.t1 MTR_8g009080 32.558 258 166 5 17 271 62 314 5.28e-32 122
MS.gene033584.t1 MTR_0009s0050 27.888 251 172 5 106 351 4 250 6.98e-32 120
MS.gene033584.t1 MTR_0009s0050 27.888 251 172 5 106 351 4 250 7.22e-32 120
MS.gene033584.t1 MTR_8g469400 28.086 324 209 8 16 332 35 341 7.76e-32 123
MS.gene033584.t1 MTR_8g009080 32.941 255 163 5 17 268 62 311 1.06e-31 122
MS.gene033584.t1 MTR_2g072910 28.782 271 177 6 13 275 16 278 1.14e-31 120
MS.gene033584.t1 MTR_0009s0400 37.931 145 87 2 209 351 1 144 7.98e-31 114
MS.gene033584.t1 MTR_2g083000 28.028 289 190 7 49 333 33 307 9.01e-31 119
MS.gene033584.t1 MTR_1g043770 30.303 264 163 7 16 271 22 272 3.11e-30 117
MS.gene033584.t1 MTR_8g033380 27.778 324 217 9 22 334 30 347 4.31e-30 118
MS.gene033584.t1 MTR_8g009150 24.501 351 225 8 1 343 15 333 1.08e-29 117
MS.gene033584.t1 MTR_0009s0050 36.000 150 93 2 204 351 20 168 1.43e-29 112
MS.gene033584.t1 MTR_3g088745 29.573 328 204 11 23 334 14 330 2.10e-29 116
MS.gene033584.t1 MTR_4g074130 28.136 295 198 7 40 331 31 314 5.75e-29 115
MS.gene033584.t1 MTR_5g048850 28.947 266 177 7 13 273 12 270 5.77e-29 113
MS.gene033584.t1 MTR_4g115990 28.369 282 171 7 49 324 46 302 7.82e-29 114
MS.gene033584.t1 MTR_2g019370 27.445 317 201 10 29 331 12 313 1.17e-28 114
MS.gene033584.t1 MTR_8g041600 29.885 261 173 5 17 272 36 291 2.47e-28 112
MS.gene033584.t1 MTR_8g093980 26.901 342 233 9 2 334 17 350 2.69e-28 113
MS.gene033584.t1 MTR_3g040410 28.763 299 194 10 49 338 6 294 6.30e-28 111
MS.gene033584.t1 MTR_5g025090 28.479 309 201 6 48 351 4 297 1.07e-27 110
MS.gene033584.t1 MTR_6g092620 28.859 298 182 11 48 334 2 280 1.11e-27 110
MS.gene033584.t1 MTR_1g043810 30.000 260 171 8 16 271 22 274 1.23e-27 110
MS.gene033584.t1 MTR_3g083370 31.034 232 142 7 48 272 3 223 1.74e-27 108
MS.gene033584.t1 MTR_1g027310 26.861 309 179 8 49 351 49 316 1.82e-27 110
MS.gene033584.t1 MTR_7g056353 29.730 333 191 9 10 333 31 329 2.47e-27 112
MS.gene033584.t1 MTR_2g069060 30.328 244 160 5 39 280 21 256 2.93e-27 108
MS.gene033584.t1 MTR_8g093930 27.000 300 198 8 49 334 47 339 3.70e-27 110
MS.gene033584.t1 MTR_1g043775 31.111 270 155 9 16 271 22 274 6.03e-27 108
MS.gene033584.t1 MTR_7g078010 32.950 261 164 4 16 272 35 288 1.61e-26 107
MS.gene033584.t1 MTR_8g009170 26.820 261 180 6 16 272 30 283 1.87e-26 107
MS.gene033584.t1 MTR_8g461330 24.917 301 198 8 47 331 25 313 9.43e-26 105
MS.gene033584.t1 MTR_5g005570 28.223 287 188 6 49 331 37 309 3.22e-25 104
MS.gene033584.t1 MTR_2g070870 25.589 297 200 8 43 331 22 305 7.02e-25 103
MS.gene033584.t1 MTR_2g083030 28.669 293 180 10 49 331 37 310 2.53e-24 102
MS.gene033584.t1 MTR_4g132770 40.000 130 73 3 209 334 29 157 3.82e-24 97.4
MS.gene033584.t1 MTR_4g123020 26.837 313 198 9 34 331 5 301 1.04e-23 100
MS.gene033584.t1 MTR_6g088665 28.049 328 196 9 35 332 4 321 1.67e-23 99.8
MS.gene033584.t1 MTR_6g088665 27.964 329 196 9 35 332 4 322 2.12e-23 99.4
MS.gene033584.t1 MTR_8g009180 28.319 226 144 4 124 332 51 275 3.50e-23 98.2
MS.gene033584.t1 MTR_4g100600 31.579 266 158 12 48 297 8 265 4.93e-23 98.2
MS.gene033584.t1 MTR_2g025120 28.017 232 149 8 48 272 3 223 5.41e-23 95.9
MS.gene033584.t1 MTR_4g096840 24.662 296 199 8 49 331 29 313 8.13e-22 95.1
MS.gene033584.t1 MTR_4g100590 31.439 264 158 10 47 297 7 260 8.65e-22 94.7
MS.gene033584.t1 MTR_5g025050 28.421 285 190 6 49 331 5 277 9.41e-22 94.4
MS.gene033584.t1 MTR_8g030880 25.387 323 187 10 49 345 10 304 3.89e-21 92.8
MS.gene033584.t1 MTR_2g033270 27.243 301 188 11 45 331 15 298 6.21e-21 92.4
MS.gene033584.t1 MTR_5g027230 27.622 286 193 6 48 331 5 278 8.43e-21 91.7
MS.gene033584.t1 MTR_4g011720 25.817 306 210 7 49 345 9 306 3.82e-20 90.1
MS.gene033584.t1 MTR_3g464530 27.184 309 176 13 40 331 25 301 1.57e-19 88.6
MS.gene033584.t1 MTR_1g086550 26.140 329 201 12 49 351 20 332 1.93e-19 88.6
MS.gene033584.t1 MTR_8g102600 27.564 312 196 12 45 332 5 310 2.74e-19 87.8
MS.gene033584.t1 MTR_5g024940 25.817 306 194 7 48 351 5 279 3.19e-19 87.0
MS.gene033584.t1 MTR_4g011690 25.649 308 209 9 49 345 9 307 1.46e-18 85.5
MS.gene033584.t1 MTR_3g108520 27.717 184 129 3 155 334 117 300 4.30e-18 84.3
MS.gene033584.t1 MTR_4g021360 23.226 310 226 8 43 343 1 307 5.40e-18 84.0
MS.gene033584.t1 MTR_1g043840 35.758 165 95 5 177 332 62 224 3.91e-17 81.6
MS.gene033584.t1 MTR_7g077670 24.359 312 203 9 49 345 11 304 8.71e-17 80.5
MS.gene033584.t1 MTR_7g090520 25.413 303 206 9 44 335 5 298 1.25e-16 80.1
MS.gene033584.t1 MTR_4g021380 25.194 258 168 8 102 345 66 312 2.17e-16 79.3
MS.gene033584.t1 MTR_6g035160 32.479 117 77 2 222 336 48 164 2.12e-15 73.9
MS.gene033584.t1 MTR_4g100600 30.568 229 136 11 48 260 8 229 3.57e-14 71.6
MS.gene033584.t1 MTR_4g094900 25.822 213 134 7 47 238 6 215 3.96e-13 68.9
MS.gene033584.t1 MTR_2g068850 28.472 144 97 4 17 158 25 164 1.89e-12 66.2
MS.gene033584.t1 MTR_0009s0410 29.747 158 96 6 13 164 11 159 2.18e-12 65.1
MS.gene033584.t1 MTR_8g102600 27.559 254 157 10 102 332 11 260 1.20e-11 64.7
MS.gene033584.t1 MTR_4g099380 30.986 142 89 3 10 148 134 269 2.12e-11 64.3
MS.gene033584.t1 MTR_2g072930 25.786 159 95 5 13 160 16 162 5.54e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033584.t1 AT3G60290 59.824 341 136 1 11 350 13 353 1.93e-152 433
MS.gene033584.t1 AT2G44800 59.649 342 137 1 10 350 12 353 1.45e-150 428
MS.gene033584.t1 AT5G07480 46.499 357 179 5 3 351 2 354 2.32e-113 333
MS.gene033584.t1 AT2G36690 42.105 342 189 6 17 351 24 363 5.89e-92 280
MS.gene033584.t1 AT2G36690 42.105 342 189 6 17 351 24 363 5.89e-92 280
MS.gene033584.t1 AT5G07480 52.245 245 110 3 114 351 1 245 5.92e-85 257
MS.gene033584.t1 AT4G10500 37.861 346 210 5 8 350 2 345 2.84e-75 236
MS.gene033584.t1 AT4G10490 39.048 315 187 4 22 333 15 327 6.86e-74 233
MS.gene033584.t1 AT5G24530 39.172 314 180 5 23 331 13 320 9.94e-70 221
MS.gene033584.t1 AT2G38240 35.522 335 198 9 11 335 9 335 3.32e-60 197
MS.gene033584.t1 AT3G55970 33.425 362 227 7 1 350 1 360 4.42e-58 192
MS.gene033584.t1 AT5G05600 35.562 329 199 8 16 335 29 353 1.61e-56 188
MS.gene033584.t1 AT3G11180 36.364 330 195 8 16 335 58 382 6.16e-56 187
MS.gene033584.t1 AT1G17020 28.655 342 233 6 17 351 21 358 6.99e-56 186
MS.gene033584.t1 AT3G11180 36.364 330 195 8 16 335 58 382 7.40e-56 187
MS.gene033584.t1 AT5G08640 33.546 313 198 6 24 331 18 325 1.18e-54 182
MS.gene033584.t1 AT5G08640 33.546 313 198 6 24 331 18 325 1.18e-54 182
MS.gene033584.t1 AT1G17010 30.205 341 229 7 17 351 21 358 1.36e-53 181
MS.gene033584.t1 AT4G16330 34.628 309 185 10 47 349 65 362 8.90e-52 176
MS.gene033584.t1 AT1G55290 32.817 323 203 8 17 333 29 343 1.45e-50 172
MS.gene033584.t1 AT3G12900 32.704 318 203 7 19 332 27 337 5.67e-50 171
MS.gene033584.t1 AT4G25300 28.152 341 235 6 17 351 20 356 2.65e-49 169
MS.gene033584.t1 AT4G22880 31.024 332 214 8 16 333 9 339 2.82e-49 169
MS.gene033584.t1 AT4G22880 31.024 332 214 8 16 333 9 339 2.82e-49 169
MS.gene033584.t1 AT4G22880 31.024 332 214 8 16 333 9 339 2.82e-49 169
MS.gene033584.t1 AT3G21420 34.084 311 194 7 49 351 55 362 1.05e-48 168
MS.gene033584.t1 AT3G51240 32.313 294 193 5 21 310 11 302 2.62e-48 166
MS.gene033584.t1 AT3G13610 29.938 324 216 6 16 335 29 345 4.37e-47 163
MS.gene033584.t1 AT1G78550 27.811 338 239 4 17 351 21 356 6.52e-47 163
MS.gene033584.t1 AT3G19010 33.648 318 196 8 28 331 7 323 7.83e-47 162
MS.gene033584.t1 AT3G19010 33.648 318 196 8 28 331 7 323 7.83e-47 162
MS.gene033584.t1 AT3G55970 34.507 284 172 7 1 272 1 282 2.60e-45 157
MS.gene033584.t1 AT3G19000 31.024 332 205 8 22 332 1 329 1.83e-44 156
MS.gene033584.t1 AT4G25310 30.421 309 202 7 49 351 52 353 1.94e-44 156
MS.gene033584.t1 AT5G63590 34.589 292 175 8 49 329 14 300 2.99e-44 154
MS.gene033584.t1 AT1G77330 31.667 300 177 7 48 333 2 287 1.08e-43 153
MS.gene033584.t1 AT4G16330 35.000 260 158 8 96 349 2 256 1.22e-43 151
MS.gene033584.t1 AT2G30840 33.333 324 204 8 16 331 23 342 4.17e-43 153
MS.gene033584.t1 AT5G20400 29.245 318 214 9 24 334 18 331 3.23e-42 150
MS.gene033584.t1 AT5G05600 35.338 266 159 8 16 272 29 290 8.86e-42 147
MS.gene033584.t1 AT4G25420 31.402 328 198 9 23 334 38 354 1.83e-41 149
MS.gene033584.t1 AT3G61400 28.532 361 237 7 1 346 12 366 2.30e-41 149
MS.gene033584.t1 AT1G49390 31.068 309 202 9 24 324 18 323 2.37e-41 148
MS.gene033584.t1 AT1G06620 31.231 333 210 8 12 334 25 348 8.85e-41 147
MS.gene033584.t1 AT5G12270 30.678 339 217 8 22 351 30 359 1.89e-40 146
MS.gene033584.t1 AT5G63600 31.379 290 183 6 49 333 33 311 2.71e-40 144
MS.gene033584.t1 AT5G20550 30.097 309 206 9 24 324 18 324 7.80e-40 144
MS.gene033584.t1 AT5G43440 29.217 332 223 6 8 331 18 345 1.36e-39 144
MS.gene033584.t1 AT5G63600 31.615 291 182 7 49 333 33 312 1.39e-39 143
MS.gene033584.t1 AT1G15550 29.553 291 191 4 49 333 57 339 2.20e-39 143
MS.gene033584.t1 AT2G30840 33.025 324 199 9 16 331 23 336 3.81e-39 142
MS.gene033584.t1 AT1G12010 30.034 293 185 8 49 334 7 286 5.11e-39 141
MS.gene033584.t1 AT1G60980 30.488 328 198 9 25 334 36 351 1.18e-38 141
MS.gene033584.t1 AT5G54000 30.249 281 189 6 49 324 46 324 2.19e-38 140
MS.gene033584.t1 AT5G43450 30.347 346 215 9 1 331 8 342 6.65e-38 139
MS.gene033584.t1 AT1G80340 30.584 291 188 4 48 332 49 331 6.75e-38 139
MS.gene033584.t1 AT1G03410 30.183 328 218 6 12 331 18 342 1.66e-37 138
MS.gene033584.t1 AT3G19010 31.132 318 174 9 28 331 7 293 1.96e-37 137
MS.gene033584.t1 AT1G03410 30.183 328 218 6 12 331 55 379 2.08e-37 139
MS.gene033584.t1 AT1G78550 29.455 275 189 4 80 351 6 278 4.68e-37 135
MS.gene033584.t1 AT1G62380 28.522 291 192 7 49 334 7 286 2.09e-36 134
MS.gene033584.t1 AT1G06650 27.596 337 224 8 12 335 24 353 3.10e-36 135
MS.gene033584.t1 AT1G49390 31.984 247 160 6 83 324 1 244 3.23e-36 132
MS.gene033584.t1 AT3G51240 34.562 217 138 3 97 310 3 218 3.68e-36 132
MS.gene033584.t1 AT1G05010 32.776 299 178 12 48 334 3 290 6.79e-36 133
MS.gene033584.t1 AT2G30830 29.231 325 212 6 16 331 23 338 7.21e-36 134
MS.gene033584.t1 AT5G51810 30.488 328 197 11 23 334 40 352 7.72e-36 134
MS.gene033584.t1 AT5G07200 30.149 335 209 9 17 334 29 355 8.17e-36 134
MS.gene033584.t1 AT1G04380 29.907 321 197 8 23 331 21 325 8.88e-36 133
MS.gene033584.t1 AT3G19010 34.363 259 155 8 29 273 8 265 1.05e-35 132
MS.gene033584.t1 AT1G03400 28.395 324 209 6 17 331 23 332 1.70e-35 132
MS.gene033584.t1 AT5G54000 30.081 246 166 5 83 324 1 244 2.24e-35 130
MS.gene033584.t1 AT1G80330 30.696 316 188 10 36 334 35 336 2.86e-35 132
MS.gene033584.t1 AT5G59530 30.061 326 213 10 17 333 27 346 5.40e-35 131
MS.gene033584.t1 AT4G21690 29.464 336 198 12 11 332 23 333 6.45e-35 131
MS.gene033584.t1 AT1G06640 28.319 339 219 11 12 335 24 353 2.35e-34 130
MS.gene033584.t1 AT1G04350 29.129 333 215 9 12 333 20 342 7.51e-34 128
MS.gene033584.t1 AT2G19590 30.892 314 183 14 49 350 11 302 9.94e-34 127
MS.gene033584.t1 AT5G59540 30.584 291 189 8 49 331 61 346 2.11e-33 127
MS.gene033584.t1 AT1G44090 32.343 303 180 10 49 334 63 357 2.14e-33 127
MS.gene033584.t1 AT3G19000 30.515 272 165 8 22 272 1 269 2.17e-33 125
MS.gene033584.t1 AT1G06645 26.979 341 222 11 12 337 37 365 1.10e-32 125
MS.gene033584.t1 AT2G30840 33.716 261 164 6 16 271 23 279 1.71e-32 123
MS.gene033584.t1 AT5G63595 29.572 257 153 7 45 297 19 251 1.95e-32 122
MS.gene033584.t1 AT4G21200 31.010 287 179 7 49 331 42 313 1.28e-31 122
MS.gene033584.t1 AT4G25300 33.155 187 108 3 167 351 91 262 2.16e-30 117
MS.gene033584.t1 AT1G03400 26.420 352 208 7 17 331 23 360 2.24e-30 119
MS.gene033584.t1 AT1G06620 32.463 268 165 7 12 272 25 283 2.56e-30 117
MS.gene033584.t1 AT4G25310 27.597 308 184 9 49 351 52 325 8.91e-30 116
MS.gene033584.t1 AT5G63580 34.310 239 143 7 42 272 8 240 9.63e-30 114
MS.gene033584.t1 AT5G43935 28.197 305 176 10 42 332 8 283 9.80e-30 115
MS.gene033584.t1 AT3G61400 28.622 283 185 5 1 272 12 288 1.16e-29 115
MS.gene033584.t1 AT5G63580 34.177 237 142 7 42 270 8 238 2.23e-29 114
MS.gene033584.t1 AT1G78440 26.299 308 195 9 43 331 8 302 2.69e-29 115
MS.gene033584.t1 AT3G49630 25.253 297 196 9 47 320 7 300 3.89e-29 115
MS.gene033584.t1 AT5G43440 29.779 272 182 5 8 274 18 285 4.22e-29 114
MS.gene033584.t1 AT3G49620 23.906 297 202 8 47 321 32 326 1.42e-28 114
MS.gene033584.t1 AT2G19590 31.250 288 165 13 75 350 21 287 1.63e-28 112
MS.gene033584.t1 AT3G49630 25.177 282 194 8 53 320 18 296 4.12e-28 112
MS.gene033584.t1 AT2G25450 26.087 322 216 7 16 325 23 334 1.43e-27 111
MS.gene033584.t1 AT1G06650 28.996 269 175 6 12 271 24 285 3.26e-27 109
MS.gene033584.t1 AT1G30040 27.129 317 200 11 36 331 6 312 5.52e-27 109
MS.gene033584.t1 AT3G50210 26.246 301 191 10 48 320 7 304 6.86e-27 108
MS.gene033584.t1 AT3G50210 26.246 301 191 10 48 320 7 304 6.86e-27 108
MS.gene033584.t1 AT3G50210 26.246 301 191 10 48 320 7 304 6.86e-27 108
MS.gene033584.t1 AT4G25420 30.075 266 159 9 23 272 38 292 3.32e-26 106
MS.gene033584.t1 AT5G43450 30.742 283 173 8 1 271 8 279 4.63e-26 105
MS.gene033584.t1 AT1G06640 28.777 278 178 9 12 278 24 292 1.33e-25 105
MS.gene033584.t1 AT1G04380 30.037 273 160 8 23 286 21 271 3.78e-25 103
MS.gene033584.t1 AT1G06640 28.839 267 172 7 12 268 24 282 4.92e-25 103
MS.gene033584.t1 AT2G34555 27.119 295 195 8 46 331 24 307 5.94e-25 103
MS.gene033584.t1 AT1G14130 28.369 282 188 5 49 327 9 279 1.96e-24 102
MS.gene033584.t1 AT1G50960 27.885 312 202 8 31 333 19 316 3.19e-24 101
MS.gene033584.t1 AT1G47990 27.010 311 185 10 43 331 9 299 1.95e-23 99.4
MS.gene033584.t1 AT1G02400 27.389 314 207 13 49 349 24 329 9.57e-23 97.4
MS.gene033584.t1 AT5G51810 29.740 269 158 11 23 275 40 293 1.63e-22 96.3
MS.gene033584.t1 AT5G59540 31.004 229 148 7 49 272 61 284 7.44e-22 94.4
MS.gene033584.t1 AT1G52820 24.749 299 208 6 45 334 8 298 1.96e-20 90.9
MS.gene033584.t1 AT2G06960 37.580 157 81 6 181 335 1 142 1.04e-19 85.1
MS.gene033584.t1 AT1G14120 26.923 286 189 7 48 327 7 278 2.29e-19 87.8
MS.gene033584.t1 AT1G14120 26.923 286 189 7 48 327 7 278 2.29e-19 87.8
MS.gene033584.t1 AT1G14120 26.923 286 189 7 48 327 7 278 2.29e-19 87.8
MS.gene033584.t1 AT1G28030 26.230 305 200 13 45 334 9 303 8.26e-19 86.3
MS.gene033584.t1 AT3G46500 28.996 269 164 11 47 297 15 274 2.25e-18 85.1
MS.gene033584.t1 AT1G35190 29.091 275 138 10 47 296 10 252 2.78e-18 84.7
MS.gene033584.t1 AT3G46500 28.731 268 164 11 47 296 15 273 3.60e-18 84.3
MS.gene033584.t1 AT3G46490 29.021 286 171 12 39 299 5 283 7.43e-18 83.6
MS.gene033584.t1 AT3G46490 29.329 283 168 12 39 296 5 280 8.02e-18 83.6
MS.gene033584.t1 AT1G35190 29.643 280 153 11 47 296 10 275 2.71e-17 82.0
MS.gene033584.t1 AT4G23340 26.299 308 202 10 49 345 10 303 4.95e-17 81.3
MS.gene033584.t1 AT3G49630 25.333 225 152 9 109 320 6 227 6.31e-17 80.1
MS.gene033584.t1 AT4G03070 24.367 316 195 10 44 335 9 304 1.27e-14 74.3
MS.gene033584.t1 AT1G30040 25.969 258 160 11 36 272 6 253 1.46e-14 73.2
MS.gene033584.t1 AT3G50210 26.512 215 136 8 117 322 23 224 3.87e-14 71.6
MS.gene033584.t1 AT5G51310 26.061 330 185 15 49 345 5 308 4.14e-13 69.7
MS.gene033584.t1 AT4G16765 32.258 155 93 7 154 297 48 201 7.66e-13 68.2
MS.gene033584.t1 AT4G16765 32.258 155 93 7 154 297 48 201 7.66e-13 68.2
MS.gene033584.t1 AT4G16765 32.258 155 93 7 154 297 48 201 7.66e-13 68.2
MS.gene033584.t1 AT4G16765 32.258 155 93 7 154 297 48 201 8.61e-13 67.8
MS.gene033584.t1 AT1G02400 27.132 258 167 12 30 274 2 251 1.59e-12 67.4
MS.gene033584.t1 AT4G23340 29.839 124 86 1 220 342 61 184 7.65e-11 61.6

Find 70 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGAGTTTGGTGTCTTTC+AGG 0.123173 7.4:-24807741 MS.gene033584:intron
TTATAGACTTGTCTAATTTA+AGG 0.135392 7.4:-24807811 MS.gene033584:CDS
GGAGCATTGGTTGTGCAATT+AGG 0.250337 7.4:-24806017 MS.gene033584:CDS
CTTCAAATCCATCCACTTAT+AGG 0.261706 7.4:-24806701 MS.gene033584:intron
GAGCATTGGTTGTGCAATTA+GGG 0.278271 7.4:-24806016 MS.gene033584:CDS
TTACAAGGAGTTTAGCTTTA+GGG 0.289594 7.4:-24805829 MS.gene033584:CDS
TAAATTAGACAAGTCTATAA+TGG 0.294943 7.4:+24807814 None:intergenic
CTTACAAGGAGTTTAGCTTT+AGG 0.296393 7.4:-24805830 MS.gene033584:CDS
TATAGACTTGTCTAATTTAA+GGG 0.301732 7.4:-24807810 MS.gene033584:CDS
CGAATTGCTTGCAAGGAGTT+TGG 0.301965 7.4:-24807752 MS.gene033584:CDS
ATCCATCCTCACTCAGATTA+TGG 0.305437 7.4:-24806125 MS.gene033584:CDS
AGACTTGTTCCATATCTTAC+AGG 0.314497 7.4:+24806810 None:intergenic
ATATGAATCCAATCTGCTAT+TGG 0.355852 7.4:+24806729 None:intergenic
AGTAACTTTGGTTTAATCCT+AGG 0.364757 7.4:+24806231 None:intergenic
GTTCACAAACCTGTAAGATA+TGG 0.390443 7.4:-24806819 MS.gene033584:CDS
TTTCTTCATGCAAGTAACTT+TGG 0.398779 7.4:+24806219 None:intergenic
CCCAAGGTGAGTCCTGGTTC+AGG 0.402659 7.4:+24806149 None:intergenic
AGTTTGTAGAAGCAGTGTTA+TGG 0.407812 7.4:+24806100 None:intergenic
CTGCTTCTACAAACTCGTTC+AGG 0.421508 7.4:-24806092 MS.gene033584:CDS
TACTTGCATGAAGAAATAAA+TGG 0.422359 7.4:-24806212 MS.gene033584:CDS
AAATTAGACAAGTCTATAAT+GGG 0.440124 7.4:+24807815 None:intergenic
CTAAACTCCTTGTAAGCCTT+AGG 0.469663 7.4:+24805837 None:intergenic
TCTATAATGGGAAGAGTGGT+GGG 0.481477 7.4:+24807827 None:intergenic
CTATAAGTGGATGGATTTGA+AGG 0.493857 7.4:+24806702 None:intergenic
TAATAGTACGCACCTATAAG+TGG 0.502036 7.4:+24806689 None:intergenic
ACCAATGCTCCATCAACAAA+AGG 0.502911 7.4:+24806029 None:intergenic
ACTCTCATCCAATAGCAGAT+TGG 0.505010 7.4:-24806737 MS.gene033584:CDS
ATGAAAGATGCTCAGCAAGT+TGG 0.505655 7.4:-24806897 MS.gene033584:CDS
TGTGCAATTAGGGGATCAAA+TGG 0.505759 7.4:-24806006 MS.gene033584:CDS
GAGTCTTCATAGTCTTGCTA+TGG 0.508636 7.4:-24805904 MS.gene033584:CDS
CCTGAACCAGGACTCACCTT+GGG 0.510316 7.4:-24806149 MS.gene033584:CDS
GCTCCATCAACAAAAGGAAC+AGG 0.512942 7.4:+24806035 None:intergenic
TTGTTGTAATGATGTTTCAA+AGG 0.513168 7.4:-24805790 MS.gene033584:CDS
GTCTATAATGGGAAGAGTGG+TGG 0.514833 7.4:+24807826 None:intergenic
CGAAATTCGAATTGCTTGCA+AGG 0.516200 7.4:-24807759 MS.gene033584:CDS
GTAATGATGTTTCAAAGGGA+AGG 0.517706 7.4:-24805785 MS.gene033584:CDS
TGTTGTAATGATGTTTCAAA+GGG 0.518081 7.4:-24805789 MS.gene033584:CDS
TGGATTCCCAAGGTGAGTCC+TGG 0.518312 7.4:+24806143 None:intergenic
TTGTTGACTCATCAATTCCA+TGG 0.526078 7.4:+24806919 None:intergenic
TCCTGAACCAGGACTCACCT+TGG 0.527555 7.4:-24806150 MS.gene033584:CDS
AGTCCTGGTTCAGGACATGT+AGG 0.540503 7.4:+24806158 None:intergenic
TGTTGATGATCAGCATCCTA+AGG 0.542397 7.4:-24805853 MS.gene033584:CDS
AACCATAATCTGAGTGAGGA+TGG 0.545774 7.4:+24806123 None:intergenic
GAGGTATAGAAGACACTCCT+TGG 0.545895 7.4:+24807906 None:intergenic
TCAGCATCCTAAGGCTTACA+AGG 0.547954 7.4:-24805844 MS.gene033584:CDS
CAAATGGAAGTTCTTAGCAA+TGG 0.553623 7.4:-24805990 MS.gene033584:CDS
TCATCAACAAGTTCAAGTGC+TGG 0.557295 7.4:+24805867 None:intergenic
TACCCTACATGTCCTGAACC+AGG 0.576430 7.4:-24806161 MS.gene033584:CDS
TTGAAACATCATTACAACAA+AGG 0.577672 7.4:+24805793 None:intergenic
CAAGTCTATAATGGGAAGAG+TGG 0.582630 7.4:+24807823 None:intergenic
GAAACATGATCATGAGTACT+AGG 0.585223 7.4:+24807854 None:intergenic
GAAATAATATTTGAAAGCCT+AGG 0.590453 7.4:-24806248 MS.gene033584:CDS
TGAGTACTAGGTCGTTGTGA+TGG 0.591996 7.4:+24807866 None:intergenic
TGCATGAAGAAATAAATGGA+GGG 0.592023 7.4:-24806208 MS.gene033584:CDS
TTGCATGAAGAAATAAATGG+AGG 0.596205 7.4:-24806209 MS.gene033584:CDS
TAGCAGATTGGATTCATATG+TGG 0.597890 7.4:-24806725 MS.gene033584:CDS
AAGAAGTGCAATCACCATGT+TGG 0.610195 7.4:+24807957 None:intergenic
AACAAGTCTTAATCAAGCCA+AGG 0.612039 7.4:-24806796 MS.gene033584:CDS
GTACTAGGTCGTTGTGATGG+AGG 0.614319 7.4:+24807869 None:intergenic
AGTACGCACCTATAAGTGGA+TGG 0.618806 7.4:+24806693 None:intergenic
CTATAATGGGAAGAGTGGTG+GGG 0.620702 7.4:+24807828 None:intergenic
TTGATGTAGGTAATTAACCA+TGG 0.623925 7.4:-24806936 MS.gene033584:intron
GTCCTGGTTCAGGACATGTA+GGG 0.629099 7.4:+24806159 None:intergenic
GGAGGAAGAATATAACATTG+AGG 0.632059 7.4:+24807887 None:intergenic
AGCATTGGTTGTGCAATTAG+GGG 0.640696 7.4:-24806015 MS.gene033584:CDS
GCTATGAGTCTAAGTGACCA+AGG 0.658478 7.4:-24807923 MS.gene033584:CDS
GAAGATGGGAAAGTATGCAG+TGG 0.692233 7.4:-24806300 MS.gene033584:CDS
ATGGAACCATAATCTGAGTG+AGG 0.720940 7.4:+24806119 None:intergenic
TGAGTGAGGATGGATTCCCA+AGG 0.736457 7.4:+24806133 None:intergenic
AGATTGGCAATGGACCAACA+TGG 0.746114 7.4:-24807971 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATAATATATTACATTTTAA+GGG - chr7.4:24806106-24806125 MS.gene033584:CDS 10.0%
!!! TGATAATATATTACATTTTA+AGG - chr7.4:24806105-24806124 MS.gene033584:CDS 10.0%
!!! TTTTTTTTTTTTTTGACATA+AGG + chr7.4:24807171-24807190 None:intergenic 10.0%
!! ACATGTATTAAAATAAACAT+TGG + chr7.4:24806161-24806180 None:intergenic 15.0%
!!! TTTTTTTATTGCAATATCAT+AGG + chr7.4:24806073-24806092 None:intergenic 15.0%
!! AAATTAAGTGACCATAAAAT+CGG + chr7.4:24806724-24806743 None:intergenic 20.0%
!! AAATTAGACAAGTCTATAAT+GGG + chr7.4:24805911-24805930 None:intergenic 20.0%
!! ACAATAATGTATCTTGATTT+GGG + chr7.4:24806533-24806552 None:intergenic 20.0%
!! GGGAAAATATAGTAAATAAA+TGG + chr7.4:24806512-24806531 None:intergenic 20.0%
!! TAAATTAGACAAGTCTATAA+TGG + chr7.4:24805912-24805931 None:intergenic 20.0%
!! TACAATAATGTATCTTGATT+TGG + chr7.4:24806534-24806553 None:intergenic 20.0%
!! TATAGACTTGTCTAATTTAA+GGG - chr7.4:24805913-24805932 MS.gene033584:CDS 20.0%
!! TCATTCCATTTAAATTTCTA+AGG + chr7.4:24807204-24807223 None:intergenic 20.0%
!! TGAAGACAAAAACAAAAATT+GGG - chr7.4:24807663-24807682 MS.gene033584:intron 20.0%
!! TTATAGACTTGTCTAATTTA+AGG - chr7.4:24805912-24805931 MS.gene033584:CDS 20.0%
!! TTGAAGACAAAAACAAAAAT+TGG - chr7.4:24807662-24807681 MS.gene033584:intron 20.0%
!!! AGTTTTGCAAAACAAATTAA+TGG - chr7.4:24807453-24807472 MS.gene033584:intron 20.0%
!!! CAAAATGAATGTTTTTGATA+GGG - chr7.4:24807399-24807418 MS.gene033584:intron 20.0%
!!! CTACATATATTGATTCTATA+CGG - chr7.4:24806681-24806700 MS.gene033584:intron 20.0%
!!! TTTTTTTGACATAAGGTATA+AGG + chr7.4:24807164-24807183 None:intergenic 20.0%
! GAAATAATATTTGAAAGCCT+AGG - chr7.4:24807475-24807494 MS.gene033584:intron 25.0%
! GGTAAAAATTAATACACTCT+TGG - chr7.4:24806003-24806022 MS.gene033584:CDS 25.0%
! TACTTGCATGAAGAAATAAA+TGG - chr7.4:24807511-24807530 MS.gene033584:intron 25.0%
! TCTTGCCTTAGAAATTTAAA+TGG - chr7.4:24807196-24807215 MS.gene033584:intron 25.0%
! TGTTGTAATGATGTTTCAAA+GGG - chr7.4:24807934-24807953 MS.gene033584:CDS 25.0%
! TTGAAACATCATTACAACAA+AGG + chr7.4:24807933-24807952 None:intergenic 25.0%
! TTGCACTACTATATATAGTA+AGG - chr7.4:24806610-24806629 MS.gene033584:intron 25.0%
! TTGTTGTAATGATGTTTCAA+AGG - chr7.4:24807933-24807952 MS.gene033584:CDS 25.0%
!! ACTTTTCCAAAAATGAGTAT+AGG + chr7.4:24806283-24806302 None:intergenic 25.0%
!! CAATAATGTATCTTGATTTG+GGG + chr7.4:24806532-24806551 None:intergenic 25.0%
!! CATGTGTATTGATATAATGT+TGG - chr7.4:24806188-24806207 MS.gene033584:CDS 25.0%
!!! ACTCATTTTTGGAAAAGTAT+AGG - chr7.4:24806285-24806304 MS.gene033584:CDS 25.0%
!!! GCAAAATGAATGTTTTTGAT+AGG - chr7.4:24807398-24807417 MS.gene033584:intron 25.0%
ATATGAATCCAATCTGCTAT+TGG + chr7.4:24806997-24807016 None:intergenic 30.0%
TATGACACTAACATTGATGT+AGG - chr7.4:24806774-24806793 MS.gene033584:CDS 30.0%
TGCATGAAGAAATAAATGGA+GGG - chr7.4:24807515-24807534 MS.gene033584:intron 30.0%
TTGATGTAGGTAATTAACCA+TGG - chr7.4:24806787-24806806 MS.gene033584:CDS 30.0%
TTGCATGAAGAAATAAATGG+AGG - chr7.4:24807514-24807533 MS.gene033584:intron 30.0%
TTTCTTCATGCAAGTAACTT+TGG + chr7.4:24807507-24807526 None:intergenic 30.0%
! AGTAACTTTGGTTTAATCCT+AGG + chr7.4:24807495-24807514 None:intergenic 30.0%
! CATATGCCTATACTCATTTT+TGG - chr7.4:24806274-24806293 MS.gene033584:CDS 30.0%
! CTTGCTATGGATAAAAAGAT+AGG - chr7.4:24807832-24807851 MS.gene033584:CDS 30.0%
! TGTCTTCTCTTTTCAAAATC+AGG - chr7.4:24806642-24806661 MS.gene033584:intron 30.0%
!! ATCCTAGTTGGCTTTATATT+CGG + chr7.4:24806582-24806601 None:intergenic 30.0%
!! TTACAAGGAGTTTAGCTTTA+GGG - chr7.4:24807894-24807913 MS.gene033584:CDS 30.0%
AACAAGTCTTAATCAAGCCA+AGG - chr7.4:24806927-24806946 MS.gene033584:CDS 35.0%
AGTTTGTAGAAGCAGTGTTA+TGG + chr7.4:24807626-24807645 None:intergenic 35.0%
CAAATGGAAGTTCTTAGCAA+TGG - chr7.4:24807733-24807752 MS.gene033584:intron 35.0%
CTTCAAATCCATCCACTTAT+AGG - chr7.4:24807022-24807041 MS.gene033584:intron 35.0%
GAAACATGATCATGAGTACT+AGG + chr7.4:24805872-24805891 None:intergenic 35.0%
GCAAAGAAAACAATCCTAGT+TGG + chr7.4:24806594-24806613 None:intergenic 35.0%
GGAGGAAGAATATAACATTG+AGG + chr7.4:24805839-24805858 None:intergenic 35.0%
GTAATGATGTTTCAAAGGGA+AGG - chr7.4:24807938-24807957 MS.gene033584:CDS 35.0%
GTTCACAAACCTGTAAGATA+TGG - chr7.4:24806904-24806923 MS.gene033584:CDS 35.0%
TAATAGTACGCACCTATAAG+TGG + chr7.4:24807037-24807056 None:intergenic 35.0%
TAGCAGATTGGATTCATATG+TGG - chr7.4:24806998-24807017 MS.gene033584:intron 35.0%
TCGTATACTTCTGATTTCTC+AGG - chr7.4:24806485-24806504 MS.gene033584:intron 35.0%
TTCGGCTCATTTATAAGCAA+AGG + chr7.4:24806564-24806583 None:intergenic 35.0%
! AGACTTGTTCCATATCTTAC+AGG + chr7.4:24806916-24806935 None:intergenic 35.0%
! CTATAAGTGGATGGATTTGA+AGG + chr7.4:24807024-24807043 None:intergenic 35.0%
! GTTTTTGATAGGGAGAAGAT+GGG - chr7.4:24807409-24807428 MS.gene033584:intron 35.0%
! TTCATTCGTCTCCGATTTTA+TGG - chr7.4:24806710-24806729 MS.gene033584:CDS 35.0%
!! CTTACAAGGAGTTTAGCTTT+AGG - chr7.4:24807893-24807912 MS.gene033584:CDS 35.0%
!! TGTTTTTGATAGGGAGAAGA+TGG - chr7.4:24807408-24807427 MS.gene033584:intron 35.0%
!! TTGTTGACTCATCAATTCCA+TGG + chr7.4:24806807-24806826 None:intergenic 35.0%
!!! AAGCGCATTTTTTCATCATG+AGG + chr7.4:24806871-24806890 None:intergenic 35.0%
!!! AGCGCATTTTTTCATCATGA+GGG + chr7.4:24806870-24806889 None:intergenic 35.0%
AACCATAATCTGAGTGAGGA+TGG + chr7.4:24807603-24807622 None:intergenic 40.0%
ACACCAACACTTCAAATCGA+AGG - chr7.4:24807242-24807261 MS.gene033584:intron 40.0%
ACCAATGCTCCATCAACAAA+AGG + chr7.4:24807697-24807716 None:intergenic 40.0%
ACTCTCATCCAATAGCAGAT+TGG - chr7.4:24806986-24807005 MS.gene033584:intron 40.0%
AGCCGAATATAAAGCCAACT+AGG - chr7.4:24806577-24806596 MS.gene033584:intron 40.0%
ATCCATCCTCACTCAGATTA+TGG - chr7.4:24807598-24807617 MS.gene033584:intron 40.0%
ATGAAAGATGCTCAGCAAGT+TGG - chr7.4:24806826-24806845 MS.gene033584:CDS 40.0%
ATGGAACCATAATCTGAGTG+AGG + chr7.4:24807607-24807626 None:intergenic 40.0%
CCAGCAAAAAACTTCATCCT+TGG + chr7.4:24806947-24806966 None:intergenic 40.0%
CGAAATTCGAATTGCTTGCA+AGG - chr7.4:24805964-24805983 MS.gene033584:CDS 40.0%
CTAAACTCCTTGTAAGCCTT+AGG + chr7.4:24807889-24807908 None:intergenic 40.0%
TCATCAACAAGTTCAAGTGC+TGG + chr7.4:24807859-24807878 None:intergenic 40.0%
TGTGCAATTAGGGGATCAAA+TGG - chr7.4:24807717-24807736 MS.gene033584:intron 40.0%
! AAGAAGTGCAATCACCATGT+TGG + chr7.4:24805769-24805788 None:intergenic 40.0%
! ACACCTTCGATTTGAAGTGT+TGG + chr7.4:24807248-24807267 None:intergenic 40.0%
! CAAGTCTATAATGGGAAGAG+TGG + chr7.4:24805903-24805922 None:intergenic 40.0%
! GAGTCTTCATAGTCTTGCTA+TGG - chr7.4:24807819-24807838 MS.gene033584:CDS 40.0%
! GTTCCTGTTCCTTTTGTTGA+TGG - chr7.4:24807685-24807704 MS.gene033584:intron 40.0%
! TCTATAATGGGAAGAGTGGT+GGG + chr7.4:24805899-24805918 None:intergenic 40.0%
!! AGCATTGGTTGTGCAATTAG+GGG - chr7.4:24807708-24807727 MS.gene033584:intron 40.0%
!! GAGCATTGGTTGTGCAATTA+GGG - chr7.4:24807707-24807726 MS.gene033584:intron 40.0%
!! TCCTTTTGTTGATGGAGCAT+TGG - chr7.4:24807693-24807712 MS.gene033584:intron 40.0%
!! TGTTGATGATCAGCATCCTA+AGG - chr7.4:24807870-24807889 MS.gene033584:CDS 40.0%
!!! CCAAGGATGAAGTTTTTTGC+TGG - chr7.4:24806944-24806963 MS.gene033584:intron 40.0%
!!! GCATTTTTTCATCATGAGGG+AGG + chr7.4:24806867-24806886 None:intergenic 40.0%
AGTACGCACCTATAAGTGGA+TGG + chr7.4:24807033-24807052 None:intergenic 45.0%
CGAATTGCTTGCAAGGAGTT+TGG - chr7.4:24805971-24805990 MS.gene033584:CDS 45.0%
CTGCTTCTACAAACTCGTTC+AGG - chr7.4:24807631-24807650 MS.gene033584:intron 45.0%
GAGGTATAGAAGACACTCCT+TGG + chr7.4:24805820-24805839 None:intergenic 45.0%
GCTATGAGTCTAAGTGACCA+AGG - chr7.4:24805800-24805819 MS.gene033584:CDS 45.0%
GCTCCATCAACAAAAGGAAC+AGG + chr7.4:24807691-24807710 None:intergenic 45.0%
TCAGCATCCTAAGGCTTACA+AGG - chr7.4:24807879-24807898 MS.gene033584:CDS 45.0%
TGAGTACTAGGTCGTTGTGA+TGG + chr7.4:24805860-24805879 None:intergenic 45.0%
! CTATAATGGGAAGAGTGGTG+GGG + chr7.4:24805898-24805917 None:intergenic 45.0%
! GAAGATGGGAAAGTATGCAG+TGG - chr7.4:24807423-24807442 MS.gene033584:intron 45.0%
! GTCTATAATGGGAAGAGTGG+TGG + chr7.4:24805900-24805919 None:intergenic 45.0%
!! CAAGGAGTTTGGTGTCTTTC+AGG - chr7.4:24805982-24806001 MS.gene033584:CDS 45.0%
!! GGAGCATTGGTTGTGCAATT+AGG - chr7.4:24807706-24807725 MS.gene033584:intron 45.0%
!! ATTATTTATAAAAGAATTAT+TGG + chr7.4:24806435-24806454 None:intergenic 5.0%
AGTCCTGGTTCAGGACATGT+AGG + chr7.4:24807568-24807587 None:intergenic 50.0%
GTACTAGGTCGTTGTGATGG+AGG + chr7.4:24805857-24805876 None:intergenic 50.0%
GTCCTGGTTCAGGACATGTA+GGG + chr7.4:24807567-24807586 None:intergenic 50.0%
TACCCTACATGTCCTGAACC+AGG - chr7.4:24807562-24807581 MS.gene033584:intron 50.0%
! TGAGTGAGGATGGATTCCCA+AGG + chr7.4:24807593-24807612 None:intergenic 50.0%
CCTGAACCAGGACTCACCTT+GGG - chr7.4:24807574-24807593 MS.gene033584:intron 55.0%
TCCTGAACCAGGACTCACCT+TGG - chr7.4:24807573-24807592 MS.gene033584:intron 55.0%
TGGATTCCCAAGGTGAGTCC+TGG + chr7.4:24807583-24807602 None:intergenic 55.0%
CCCAAGGTGAGTCCTGGTTC+AGG + chr7.4:24807577-24807596 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 24805761 24807984 24805761 ID=MS.gene033584
chr7.4 mRNA 24805761 24807984 24805761 ID=MS.gene033584.t1;Parent=MS.gene033584
chr7.4 exon 24807742 24807984 24807742 ID=MS.gene033584.t1.exon1;Parent=MS.gene033584.t1
chr7.4 CDS 24807742 24807984 24807742 ID=cds.MS.gene033584.t1;Parent=MS.gene033584.t1
chr7.4 exon 24806702 24806949 24806702 ID=MS.gene033584.t1.exon2;Parent=MS.gene033584.t1
chr7.4 CDS 24806702 24806949 24806702 ID=cds.MS.gene033584.t1;Parent=MS.gene033584.t1
chr7.4 exon 24805761 24806325 24805761 ID=MS.gene033584.t1.exon3;Parent=MS.gene033584.t1
chr7.4 CDS 24805761 24806325 24805761 ID=cds.MS.gene033584.t1;Parent=MS.gene033584.t1
Gene Sequence

>MS.gene033584

ATGGACCAACATGGTGATTGCACTTCTTCATTTACTAGTGCTATGAGTCTAAGTGACCAAGGAGTGTCTTCTATACCTCAATGTTATATTCTTCCTCCATCACAACGACCTAGTACTCATGATCATGTTTCTATCCCCACCACTCTTCCCATTATAGACTTGTCTAATTTAAGGGAACAATCTCTTAGATCTCAAACGATCAACGAAATTCGAATTGCTTGCAAGGAGTTTGGTGTCTTTCAGGTAAAAATTAATACACTCTTGGTTTGCATTTCATAAGAATTTGAAATCACTTGTTCTTTTTTTGTTCCTATGATATTGCAATAAAAAAAATAACAACTAAATGATAATATATTACATTTTAAGGGAAAAAAAGTTTGATGAATTGTTAAAACATCCAATGTTTATTTTAATACATGTAAATATACATGTGTATTGATATAATGTTGGACATCAAATAGACACATTTATATTATTATATTATTATACACACGTTTGTATATATTAATATAGCATATGCCTATACTCATTTTTGGAAAAGTATAGGCTAGTAAAGTAGTAACAATAATATATATATATATATATATATATATATATATATATATATATAAATTTATATATATATATATATATATATATATTCATAATAAAAAACATTAAAAATAATATTTCCAATAATTCTTTTATAAATAATTATTTTATAAAACATAAATATTTCAACTAGTCGTATACTTCTGATTTCTCAGGACCATTTATTTACTATATTTTCCCCAAATCAAGATACATTATTGTACTTGTCACCTTTGCTTATAAATGAGCCGAATATAAAGCCAACTAGGATTGTTTTCTTTGCACTACTATATATAGTAAGGTACTTGTCTTGTCTTCTCTTTTCAAAATCAGGATACACAAGTGAGAAGCTACATATATTGATTCTATACGGTCTACGTTCATTCGTCTCCGATTTTATGGTCACTTAATTTCATTCATCAGCAATATTTATTAAATTAACATATGACACTAACATTGATGTAGGTAATTAACCATGGAATTGATGAGTCAACAATGAAAGATGCTCAGCAAGTTGGAACAGAATTCTTCAACCTCCCTCATGATGAAAAAATGCGCTTATTTTCTGATGATGTTCACAAACCTGTAAGATATGGAACAAGTCTTAATCAAGCCAAGGATGAAGTTTTTTGCTGGAGAGATTTCATCAAACATTACTCTCATCCAATAGCAGATTGGATTCATATGTGGCCTTCAAATCCATCCACTTATAGGTGCGTACTATTAATGTAGACATTTTCAAATTATAATGCAAAATATTCAATCAACAATATTTTTTTTAAGAAGAACAATAAATTTATTAAAATAACTTTTTCTTGATATGAAAAGCTCCTTATACCTTATGTCAAAAAAAAAAAAAAAAACTTCTTGCCTTAGAAATTTAAATGGAATGATGAAGTTTGACTTATCTAACACCAACACTTCAAATCGAAGGTGTGTCAAATGTTAAAGCACGTGTTAGTGAAAAGCATGTGTCAGTCAATTTTTTTTAATAAATTATCAGTATTGTCTACGTGTGTCATGTCTGTATCTATGTTAGTACTTCTATTGATCTGTAAAATTAATGAGCAAAATGAATGTTTTTGATAGGGAGAAGATGGGAAAGTATGCAGTGGCAACACAAGTTTTGCAAAACAAATTAATGGAAATAATATTTGAAAGCCTAGGATTAAACCAAAGTTACTTGCATGAAGAAATAAATGGAGGGTCACAAGTAGTAGCAGTGAACTGCTACCCTACATGTCCTGAACCAGGACTCACCTTGGGAATCCATCCTCACTCAGATTATGGTTCCATAACACTGCTTCTACAAACTCGTTCAGGACTAGAAATTGAAGACAAAAACAAAAATTGGGTTCCTGTTCCTTTTGTTGATGGAGCATTGGTTGTGCAATTAGGGGATCAAATGGAAGTTCTTAGCAATGGAGAGTATAAGAGTGTGATTCATAGAGCAACTGTTAATGAAGATGAGAAGAGATTTTCTATTGTGAGTCTTCATAGTCTTGCTATGGATAAAAAGATAGGTCCAGCACTTGAACTTGTTGATGATCAGCATCCTAAGGCTTACAAGGAGTTTAGCTTTAGGGAATTTCTTGAATTCCTTTGTTGTAATGATGTTTCAAAGGGAAGGTTTCTTGATACTTTGAAACTATGA

Protein sequence

>MS.gene033584.t1

MDQHGDCTSSFTSAMSLSDQGVSSIPQCYILPPSQRPSTHDHVSIPTTLPIIDLSNLREQSLRSQTINEIRIACKEFGVFQVINHGIDESTMKDAQQVGTEFFNLPHDEKMRLFSDDVHKPVRYGTSLNQAKDEVFCWRDFIKHYSHPIADWIHMWPSNPSTYREKMGKYAVATQVLQNKLMEIIFESLGLNQSYLHEEINGGSQVVAVNCYPTCPEPGLTLGIHPHSDYGSITLLLQTRSGLEIEDKNKNWVPVPFVDGALVVQLGDQMEVLSNGEYKSVIHRATVNEDEKRFSIVSLHSLAMDKKIGPALELVDDQHPKAYKEFSFREFLEFLCCNDVSKGRFLDTLKL