AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024150.t1 MTR_7g081710 94.872 351 15 1 1 348 1 351 0.0 691
MS.gene024150.t1 MTR_1g048940 48.711 349 176 3 3 348 2 350 1.45e-124 362
MS.gene024150.t1 MTR_1g062110 41.618 346 186 5 17 348 30 373 1.36e-93 284
MS.gene024150.t1 MTR_7g102820 39.710 345 185 5 25 348 38 380 5.15e-89 272
MS.gene024150.t1 MTR_8g024120 38.720 328 195 4 25 348 18 343 5.79e-80 248
MS.gene024150.t1 MTR_3g092890 37.690 329 196 4 23 347 13 336 1.25e-74 234
MS.gene024150.t1 MTR_5g065010 34.393 346 214 8 11 348 2 342 5.19e-68 217
MS.gene024150.t1 MTR_1g062110 42.322 267 138 5 17 269 30 294 3.10e-67 214
MS.gene024150.t1 MTR_7g068650 37.349 332 191 7 16 332 17 346 4.54e-67 215
MS.gene024150.t1 MTR_1g070080 36.825 315 191 6 21 330 10 321 6.65e-67 214
MS.gene024150.t1 MTR_1g070135 36.570 309 189 6 24 328 14 319 1.20e-66 213
MS.gene024150.t1 MTR_1g070120 36.013 311 192 6 22 328 12 319 1.79e-66 213
MS.gene024150.t1 MTR_1g070085 35.783 313 195 5 21 329 10 320 2.03e-65 210
MS.gene024150.t1 MTR_1g070085 35.783 313 195 5 21 329 10 320 2.03e-65 210
MS.gene024150.t1 MTR_3g063180 35.088 342 212 6 16 348 12 352 8.38e-65 209
MS.gene024150.t1 MTR_4g015790 35.608 337 191 8 16 328 16 350 5.66e-61 200
MS.gene024150.t1 MTR_3g091360 34.943 352 214 9 5 347 8 353 6.02e-61 199
MS.gene024150.t1 MTR_5g032870 36.452 310 188 7 29 330 19 327 9.31e-60 196
MS.gene024150.t1 MTR_3g091350 34.454 357 204 10 8 347 17 360 1.41e-59 196
MS.gene024150.t1 MTR_5g082750 35.503 338 204 8 6 332 6 340 4.85e-59 194
MS.gene024150.t1 MTR_2g437380 33.036 336 208 8 24 348 27 356 2.55e-57 190
MS.gene024150.t1 MTR_5g032880 36.825 315 190 7 24 330 352 665 7.17e-57 196
MS.gene024150.t1 MTR_5g032880 36.190 315 184 8 29 335 19 324 1.18e-56 196
MS.gene024150.t1 MTR_7g105070 32.258 341 219 6 16 348 26 362 2.31e-56 187
MS.gene024150.t1 MTR_4g093840 32.782 363 219 12 3 348 12 366 1.01e-55 186
MS.gene024150.t1 MTR_3g070860 32.945 343 216 8 1 332 2 341 2.97e-55 184
MS.gene024150.t1 MTR_0009s0480 32.471 348 212 10 13 348 11 347 2.03e-54 182
MS.gene024150.t1 MTR_0328s0030 30.882 340 228 6 13 348 10 346 2.25e-54 182
MS.gene024150.t1 MTR_2g072890 30.899 356 231 9 3 348 5 355 5.55e-54 181
MS.gene024150.t1 MTR_1g070135 38.400 250 147 6 24 269 14 260 2.62e-53 177
MS.gene024150.t1 MTR_1g033810 32.024 331 210 7 8 328 5 330 3.37e-53 179
MS.gene024150.t1 MTR_5g048470 28.863 343 233 7 13 348 17 355 6.38e-53 178
MS.gene024150.t1 MTR_5g048740 29.261 352 235 9 5 348 2 347 6.74e-53 178
MS.gene024150.t1 MTR_6g015950 34.936 312 191 6 23 328 14 319 1.38e-52 177
MS.gene024150.t1 MTR_8g075830 31.692 325 214 7 24 342 15 337 2.39e-52 177
MS.gene024150.t1 MTR_8g064200 28.363 342 235 7 13 348 17 354 5.26e-52 176
MS.gene024150.t1 MTR_7g016090 31.193 327 212 6 23 345 14 331 5.47e-52 175
MS.gene024150.t1 MTR_7g016090 31.193 327 212 6 23 345 16 333 6.01e-52 175
MS.gene024150.t1 MTR_3g026150 31.564 358 217 9 6 348 16 360 6.10e-52 176
MS.gene024150.t1 MTR_8g064200 28.363 342 235 7 13 348 22 359 6.28e-52 176
MS.gene024150.t1 MTR_8g075890 32.000 325 213 7 24 342 15 337 1.07e-51 176
MS.gene024150.t1 MTR_5g022020 30.448 335 223 7 9 337 2 332 1.71e-51 175
MS.gene024150.t1 MTR_7g062570 33.019 318 193 10 23 329 29 337 3.97e-51 174
MS.gene024150.t1 MTR_3g058610 30.675 326 218 7 23 342 14 337 1.06e-50 172
MS.gene024150.t1 MTR_5g059130 32.923 325 195 8 18 329 13 327 2.63e-50 171
MS.gene024150.t1 MTR_1g070085 34.568 243 156 3 89 329 1 242 1.81e-49 167
MS.gene024150.t1 MTR_2g072910 28.291 357 238 7 3 348 5 354 1.94e-49 169
MS.gene024150.t1 MTR_5g055800 30.548 347 219 9 13 348 12 347 3.14e-49 169
MS.gene024150.t1 MTR_5g055690 29.532 342 231 6 13 348 12 349 3.16e-49 169
MS.gene024150.t1 MTR_3g072810 34.356 326 194 10 16 328 8 326 6.58e-49 167
MS.gene024150.t1 MTR_2g069090 30.029 343 225 7 16 348 35 372 9.21e-49 168
MS.gene024150.t1 MTR_7g062580 30.449 312 202 7 44 348 53 356 9.81e-49 167
MS.gene024150.t1 MTR_7g063730 33.779 299 181 8 39 329 57 346 1.02e-48 168
MS.gene024150.t1 MTR_5g055900 29.360 344 228 8 13 348 12 348 1.73e-48 167
MS.gene024150.t1 MTR_7g062550 34.694 294 175 8 44 329 58 342 3.05e-48 167
MS.gene024150.t1 MTR_5g048570 29.532 342 228 8 13 348 12 346 3.28e-48 166
MS.gene024150.t1 MTR_5g055820 29.855 345 226 9 13 348 12 349 4.50e-48 166
MS.gene024150.t1 MTR_7g062600 33.220 295 179 9 44 329 49 334 4.65e-48 166
MS.gene024150.t1 MTR_2g069190 30.233 344 222 7 16 348 35 371 5.59e-48 166
MS.gene024150.t1 MTR_8g009080 33.025 324 203 7 17 331 62 380 2.08e-47 165
MS.gene024150.t1 MTR_5g059140 33.766 308 183 9 23 317 16 315 3.68e-47 163
MS.gene024150.t1 MTR_7g016080 33.123 317 191 7 23 332 14 316 3.95e-47 162
MS.gene024150.t1 MTR_1g070100 34.177 237 153 3 95 329 3 238 6.04e-47 160
MS.gene024150.t1 MTR_5g055680 28.824 340 227 8 17 348 16 348 1.28e-46 162
MS.gene024150.t1 MTR_5g048550 27.988 343 234 7 13 348 12 348 1.57e-46 162
MS.gene024150.t1 MTR_1g093110 33.673 294 177 6 46 329 70 355 2.15e-46 162
MS.gene024150.t1 MTR_5g011250 30.303 330 213 8 16 329 10 338 2.71e-46 161
MS.gene024150.t1 MTR_0009s0050 27.907 344 233 8 13 348 12 348 1.33e-45 159
MS.gene024150.t1 MTR_0009s0050 27.907 344 233 8 13 348 12 348 1.74e-45 159
MS.gene024150.t1 MTR_1g093140 30.233 344 212 7 6 329 24 359 4.33e-45 158
MS.gene024150.t1 MTR_2g437380 33.835 266 166 5 89 348 1 262 8.23e-45 155
MS.gene024150.t1 MTR_5g048850 28.779 344 230 8 13 348 12 348 8.29e-45 157
MS.gene024150.t1 MTR_8g009160 29.538 325 215 6 16 332 30 348 8.61e-45 157
MS.gene024150.t1 MTR_8g074050 32.500 280 183 5 46 321 52 329 9.02e-45 157
MS.gene024150.t1 MTR_2g069210 29.532 342 227 7 16 348 31 367 1.07e-44 157
MS.gene024150.t1 MTR_1g070185 32.092 349 216 8 10 348 30 367 2.25e-44 156
MS.gene024150.t1 MTR_2g069010 29.885 348 215 8 10 338 29 366 3.50e-44 156
MS.gene024150.t1 MTR_2g068840 30.887 327 207 9 16 330 24 343 4.93e-44 155
MS.gene024150.t1 MTR_3g072820 30.514 331 214 9 6 328 2 324 1.22e-43 154
MS.gene024150.t1 MTR_8g074070 32.500 280 183 5 46 321 52 329 1.51e-43 154
MS.gene024150.t1 MTR_4g116010 31.290 310 195 9 46 348 50 348 1.90e-43 153
MS.gene024150.t1 MTR_3g088565 32.787 305 166 9 45 329 2 287 2.23e-43 152
MS.gene024150.t1 MTR_2g069300 30.303 330 215 7 12 331 17 341 6.75e-43 152
MS.gene024150.t1 MTR_2g102570 31.104 299 179 7 44 329 50 334 1.25e-42 152
MS.gene024150.t1 MTR_4g087090 30.861 337 212 9 29 348 12 344 1.83e-42 151
MS.gene024150.t1 MTR_8g062600 29.480 346 224 8 16 348 35 373 2.75e-42 151
MS.gene024150.t1 MTR_1g034120 31.915 329 197 8 25 329 4 329 3.98e-42 150
MS.gene024150.t1 MTR_4g024660 28.280 343 232 6 16 348 35 373 4.39e-42 150
MS.gene024150.t1 MTR_1g043760 30.357 336 220 7 16 342 22 352 4.68e-42 150
MS.gene024150.t1 MTR_2g068950 29.794 339 213 7 10 331 23 353 6.53e-42 150
MS.gene024150.t1 MTR_0032s0040 30.539 334 207 10 16 331 30 356 7.49e-42 150
MS.gene024150.t1 MTR_3g117420 28.929 280 193 5 46 321 52 329 1.43e-41 149
MS.gene024150.t1 MTR_1g034060 31.915 329 197 8 25 329 4 329 1.94e-41 148
MS.gene024150.t1 MTR_3g043900 30.982 326 208 9 16 332 20 337 2.44e-41 148
MS.gene024150.t1 MTR_7g029655 29.738 343 203 11 16 336 30 356 3.30e-41 148
MS.gene024150.t1 MTR_2g068960 30.088 339 212 7 10 331 23 353 3.74e-41 148
MS.gene024150.t1 MTR_3g083370 31.959 291 181 8 45 329 3 282 4.05e-41 146
MS.gene024150.t1 MTR_8g009170 27.554 323 223 6 16 331 30 348 6.64e-41 147
MS.gene024150.t1 MTR_1g093120 31.633 294 184 6 45 329 66 351 7.53e-41 147
MS.gene024150.t1 MTR_8g009090 28.615 325 218 6 16 332 30 348 9.37e-41 147
MS.gene024150.t1 MTR_4g087140 29.909 331 206 9 22 329 1 328 1.16e-40 146
MS.gene024150.t1 MTR_8g028435 29.231 325 216 8 16 332 30 348 1.51e-40 146
MS.gene024150.t1 MTR_1g034140 31.548 336 205 7 22 339 1 329 1.90e-40 145
MS.gene024150.t1 MTR_2g069020 30.205 341 220 8 10 338 27 361 4.21e-40 145
MS.gene024150.t1 MTR_8g009110 27.778 324 223 6 16 332 30 349 5.35e-40 145
MS.gene024150.t1 MTR_7g062560 30.141 355 216 13 6 348 19 353 6.06e-40 144
MS.gene024150.t1 MTR_2g069020 30.205 341 220 8 10 338 27 361 6.32e-40 145
MS.gene024150.t1 MTR_7g045650 35.124 242 146 6 46 282 60 295 6.57e-40 143
MS.gene024150.t1 MTR_8g008930 28.528 326 218 7 16 332 30 349 7.47e-40 144
MS.gene024150.t1 MTR_3g045230 30.675 326 210 8 16 332 20 338 1.01e-39 144
MS.gene024150.t1 MTR_8g063070 30.556 324 211 6 16 329 35 354 1.36e-39 144
MS.gene024150.t1 MTR_7g056347 29.630 351 229 8 10 348 29 373 1.64e-39 144
MS.gene024150.t1 MTR_4g087100 31.475 305 185 6 46 329 26 327 1.99e-39 143
MS.gene024150.t1 MTR_8g074070 32.616 279 165 7 46 321 52 310 2.09e-39 142
MS.gene024150.t1 MTR_1g102070 30.312 320 208 6 24 331 37 353 2.87e-39 143
MS.gene024150.t1 MTR_1g043810 30.435 322 209 9 16 328 22 337 5.03e-39 142
MS.gene024150.t1 MTR_1g043775 30.904 343 203 10 16 340 22 348 7.02e-39 141
MS.gene024150.t1 MTR_1g043770 30.218 321 197 9 16 322 22 329 4.43e-38 139
MS.gene024150.t1 MTR_3g026150 32.616 279 161 8 6 269 16 282 5.34e-38 137
MS.gene024150.t1 MTR_1g032250 29.664 327 199 9 19 329 42 353 6.50e-38 139
MS.gene024150.t1 MTR_4g087110 31.148 305 186 7 46 329 26 327 1.01e-37 138
MS.gene024150.t1 MTR_2g025120 29.630 297 190 9 43 331 1 286 1.08e-37 137
MS.gene024150.t1 MTR_1g032140 29.706 340 224 8 16 347 32 364 1.31e-37 138
MS.gene024150.t1 MTR_5g085330 31.788 302 185 8 43 334 2 292 1.52e-37 137
MS.gene024150.t1 MTR_4g117880 28.000 325 221 7 12 328 26 345 1.72e-37 138
MS.gene024150.t1 MTR_8g009120 26.036 338 229 6 1 332 15 337 2.65e-37 137
MS.gene024150.t1 MTR_3g026150 32.422 256 161 6 99 348 8 257 3.82e-37 134
MS.gene024150.t1 MTR_3g096500 31.307 329 201 8 20 331 40 360 4.41e-37 137
MS.gene024150.t1 MTR_7g078010 31.288 326 206 5 16 329 35 354 4.74e-37 137
MS.gene024150.t1 MTR_4g087120 30.164 305 189 5 46 329 26 327 6.42e-37 136
MS.gene024150.t1 MTR_6g464620 28.947 342 225 8 3 331 22 358 6.90e-37 137
MS.gene024150.t1 MTR_4g119410 29.855 345 224 5 16 348 35 373 9.48e-37 136
MS.gene024150.t1 MTR_0009s0480 32.714 269 158 10 13 269 11 268 1.46e-36 133
MS.gene024150.t1 MTR_1g032220 28.319 339 202 10 12 329 35 353 4.12e-36 134
MS.gene024150.t1 MTR_2g069060 29.167 288 197 5 44 328 47 330 4.29e-36 134
MS.gene024150.t1 MTR_8g041620 28.406 345 230 7 16 348 35 374 1.10e-35 134
MS.gene024150.t1 MTR_7g056393 29.429 350 231 5 10 348 29 373 1.16e-35 133
MS.gene024150.t1 MTR_1g081840 31.333 300 185 6 47 331 54 347 2.43e-35 132
MS.gene024150.t1 MTR_7g102720 31.046 306 194 7 27 329 25 316 3.03e-35 131
MS.gene024150.t1 MTR_8g469400 28.483 323 206 7 16 329 35 341 5.27e-35 131
MS.gene024150.t1 MTR_8g041600 27.536 345 233 7 16 348 35 374 6.24e-35 131
MS.gene024150.t1 MTR_2g068800 31.522 276 159 6 16 283 24 277 9.76e-35 129
MS.gene024150.t1 MTR_8g006930 28.655 342 232 4 16 348 35 373 1.18e-34 130
MS.gene024150.t1 MTR_1g070110 31.967 244 133 4 89 330 4 216 1.18e-34 127
MS.gene024150.t1 MTR_3g117485 28.966 290 188 9 42 321 48 329 3.41e-34 129
MS.gene024150.t1 MTR_4g087130 32.000 300 187 7 46 328 26 325 4.05e-34 129
MS.gene024150.t1 MTR_8g009080 33.333 258 161 6 17 268 62 314 6.06e-34 127
MS.gene024150.t1 MTR_1g027290 28.213 319 204 8 46 348 29 338 8.81e-34 127
MS.gene024150.t1 MTR_8g009080 33.594 256 159 6 16 265 61 311 2.05e-33 126
MS.gene024150.t1 MTR_8g033380 28.125 320 218 7 22 331 30 347 2.06e-33 127
MS.gene024150.t1 MTR_0056s0160 29.000 200 139 2 151 348 35 233 3.18e-33 123
MS.gene024150.t1 MTR_1g011580 26.621 293 192 7 44 329 61 337 5.36e-33 126
MS.gene024150.t1 MTR_5g055690 31.179 263 171 6 13 269 12 270 6.94e-33 124
MS.gene024150.t1 MTR_7g451860 30.796 289 181 7 46 328 41 316 7.52e-33 125
MS.gene024150.t1 MTR_7g047670 30.796 289 181 7 46 328 41 316 7.52e-33 125
MS.gene024150.t1 MTR_3g117485 30.078 256 166 7 74 321 7 257 8.13e-33 124
MS.gene024150.t1 MTR_2g072910 28.470 281 183 7 3 272 5 278 7.62e-32 121
MS.gene024150.t1 MTR_8g009150 25.575 348 222 9 1 340 15 333 2.39e-31 121
MS.gene024150.t1 MTR_0009s0050 27.490 251 173 5 103 348 4 250 3.29e-31 119
MS.gene024150.t1 MTR_0009s0050 27.490 251 173 5 103 348 4 250 4.31e-31 118
MS.gene024150.t1 MTR_2g083000 28.028 289 190 7 46 330 33 307 5.29e-31 120
MS.gene024150.t1 MTR_3g088745 28.882 322 211 9 23 331 14 330 2.30e-30 119
MS.gene024150.t1 MTR_0009s0400 37.241 145 88 2 206 348 1 144 3.42e-30 112
MS.gene024150.t1 MTR_2g019370 28.025 314 200 10 29 328 12 313 3.49e-30 118
MS.gene024150.t1 MTR_1g043810 30.502 259 168 8 16 268 22 274 1.68e-29 115
MS.gene024150.t1 MTR_4g115990 29.078 282 169 8 46 321 46 302 1.92e-29 115
MS.gene024150.t1 MTR_8g093980 26.627 338 236 7 2 331 17 350 2.45e-29 116
MS.gene024150.t1 MTR_1g043775 30.970 268 155 8 16 268 22 274 3.86e-29 114
MS.gene024150.t1 MTR_1g043770 30.303 264 160 8 16 268 22 272 4.28e-29 114
MS.gene024150.t1 MTR_0009s0050 35.333 150 94 2 201 348 20 168 7.42e-29 110
MS.gene024150.t1 MTR_8g093930 26.006 323 218 8 23 331 24 339 9.80e-29 114
MS.gene024150.t1 MTR_6g092620 28.859 298 182 11 45 331 2 280 1.13e-28 113
MS.gene024150.t1 MTR_5g048850 28.947 266 174 8 13 270 12 270 1.20e-28 112
MS.gene024150.t1 MTR_4g074130 28.322 286 191 7 46 328 40 314 1.78e-28 113
MS.gene024150.t1 MTR_1g027310 27.931 290 162 8 46 329 49 297 2.18e-28 112
MS.gene024150.t1 MTR_3g040410 28.763 299 194 10 46 335 6 294 2.61e-28 112
MS.gene024150.t1 MTR_8g009170 27.132 258 180 5 16 269 30 283 1.10e-27 110
MS.gene024150.t1 MTR_5g025090 28.479 309 201 6 45 348 4 297 1.14e-27 110
MS.gene024150.t1 MTR_3g083370 30.769 234 144 7 43 269 1 223 1.53e-27 108
MS.gene024150.t1 MTR_2g069060 30.263 228 153 4 44 269 25 248 4.79e-27 107
MS.gene024150.t1 MTR_8g041600 29.389 262 172 6 16 269 35 291 6.54e-27 108
MS.gene024150.t1 MTR_8g461330 25.249 301 197 8 44 328 25 313 8.75e-27 108
MS.gene024150.t1 MTR_7g056353 33.054 239 147 5 100 330 96 329 1.02e-26 110
MS.gene024150.t1 MTR_2g070870 26.263 297 198 8 40 328 22 305 2.78e-26 107
MS.gene024150.t1 MTR_7g078010 31.907 257 169 3 16 269 35 288 1.07e-25 105
MS.gene024150.t1 MTR_5g005570 28.223 287 188 6 46 328 37 309 2.13e-25 104
MS.gene024150.t1 MTR_4g132770 40.769 130 72 3 206 331 29 157 6.59e-25 99.4
MS.gene024150.t1 MTR_2g083030 29.010 293 179 11 46 328 37 310 1.78e-24 102
MS.gene024150.t1 MTR_8g009180 28.761 226 143 4 121 329 51 275 3.89e-24 100
MS.gene024150.t1 MTR_4g100600 31.579 266 158 12 45 294 8 265 2.69e-23 99.0
MS.gene024150.t1 MTR_2g025120 27.778 234 151 8 43 269 1 223 5.39e-23 95.9
MS.gene024150.t1 MTR_4g123020 27.181 298 186 9 46 328 20 301 6.00e-23 97.8
MS.gene024150.t1 MTR_4g096840 24.324 296 200 8 46 328 29 313 3.78e-22 95.9
MS.gene024150.t1 MTR_4g011720 25.641 312 215 7 40 342 3 306 6.49e-22 94.7
MS.gene024150.t1 MTR_8g030880 25.076 331 194 10 38 342 2 304 7.76e-22 94.7
MS.gene024150.t1 MTR_5g025050 28.772 285 189 7 46 328 5 277 1.21e-21 94.0
MS.gene024150.t1 MTR_5g027230 27.622 286 193 6 45 328 5 278 1.78e-21 93.6
MS.gene024150.t1 MTR_6g088665 28.165 316 184 9 44 329 19 321 2.35e-21 93.6
MS.gene024150.t1 MTR_6g088665 28.076 317 184 9 44 329 19 322 3.16e-21 93.2
MS.gene024150.t1 MTR_4g100590 30.943 265 160 10 43 294 6 260 4.07e-21 92.8
MS.gene024150.t1 MTR_1g086550 26.220 328 202 12 46 348 20 332 6.56e-20 89.7
MS.gene024150.t1 MTR_3g464530 27.667 300 168 13 46 328 34 301 1.24e-19 88.6
MS.gene024150.t1 MTR_2g033270 26.599 297 187 12 46 328 19 298 1.44e-19 88.6
MS.gene024150.t1 MTR_8g102600 28.571 308 187 12 46 329 12 310 4.72e-19 87.0
MS.gene024150.t1 MTR_5g024940 25.490 306 195 7 45 348 5 279 4.98e-19 86.3
MS.gene024150.t1 MTR_4g011690 25.397 315 213 9 40 342 3 307 5.07e-19 86.7
MS.gene024150.t1 MTR_3g108520 27.717 184 129 3 152 331 117 300 1.13e-18 85.9
MS.gene024150.t1 MTR_4g021360 23.355 304 221 8 46 340 7 307 3.94e-18 84.3
MS.gene024150.t1 MTR_7g077670 24.359 312 203 9 46 342 11 304 4.06e-17 81.3
MS.gene024150.t1 MTR_4g021380 25.194 258 168 8 99 342 66 312 5.61e-17 80.9
MS.gene024150.t1 MTR_1g043840 35.152 165 96 5 174 329 62 224 1.58e-16 79.7
MS.gene024150.t1 MTR_7g090520 25.839 298 201 9 46 332 10 298 2.81e-16 79.0
MS.gene024150.t1 MTR_6g035160 32.479 117 77 2 219 333 48 164 2.35e-15 73.6
MS.gene024150.t1 MTR_4g100600 30.568 229 136 11 45 257 8 229 4.65e-14 71.2
MS.gene024150.t1 MTR_4g094900 25.822 213 134 7 44 235 6 215 1.84e-13 69.7
MS.gene024150.t1 MTR_8g102600 28.627 255 153 11 99 329 11 260 2.03e-12 67.0
MS.gene024150.t1 MTR_3g464530 27.386 241 136 11 46 269 34 252 3.23e-12 66.2
MS.gene024150.t1 MTR_0009s0410 30.380 158 92 7 13 161 11 159 8.20e-12 63.2
MS.gene024150.t1 MTR_4g099380 32.143 140 87 3 10 145 134 269 2.32e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024150.t1 AT3G60290 60.117 341 132 1 11 347 13 353 2.21e-152 432
MS.gene024150.t1 AT2G44800 59.649 342 134 1 10 347 12 353 2.20e-150 427
MS.gene024150.t1 AT5G07480 46.910 356 179 6 1 348 1 354 5.99e-113 332
MS.gene024150.t1 AT2G36690 41.813 342 187 5 17 348 24 363 7.31e-93 281
MS.gene024150.t1 AT2G36690 41.813 342 187 5 17 348 24 363 7.31e-93 281
MS.gene024150.t1 AT5G07480 51.837 245 111 3 111 348 1 245 1.62e-84 256
MS.gene024150.t1 AT4G10500 37.971 345 206 6 9 347 3 345 4.01e-75 236
MS.gene024150.t1 AT4G10490 39.365 315 183 5 22 330 15 327 1.79e-73 231
MS.gene024150.t1 AT5G24530 39.297 313 178 5 23 328 13 320 6.89e-71 224
MS.gene024150.t1 AT2G38240 35.821 335 194 9 11 332 9 335 1.55e-60 198
MS.gene024150.t1 AT3G55970 34.711 363 218 8 1 347 1 360 4.56e-60 197
MS.gene024150.t1 AT5G05600 36.170 329 194 9 16 332 29 353 5.48e-57 189
MS.gene024150.t1 AT3G11180 36.364 330 192 9 16 332 58 382 7.44e-56 187
MS.gene024150.t1 AT3G11180 36.364 330 192 9 16 332 58 382 7.70e-56 187
MS.gene024150.t1 AT1G17010 29.912 341 227 7 17 348 21 358 1.05e-54 183
MS.gene024150.t1 AT5G08640 33.546 313 195 7 24 328 18 325 1.36e-53 179
MS.gene024150.t1 AT5G08640 33.546 313 195 7 24 328 18 325 1.36e-53 179
MS.gene024150.t1 AT1G17020 28.363 342 231 7 17 348 21 358 1.91e-53 180
MS.gene024150.t1 AT1G55290 33.538 325 197 10 16 330 28 343 2.69e-52 177
MS.gene024150.t1 AT4G16330 34.069 317 189 11 39 346 57 362 8.27e-52 176
MS.gene024150.t1 AT3G21420 34.906 318 195 8 40 348 48 362 2.17e-51 175
MS.gene024150.t1 AT3G51240 32.765 293 190 5 21 307 11 302 4.33e-51 174
MS.gene024150.t1 AT4G25300 30.421 309 205 6 46 348 52 356 6.74e-49 168
MS.gene024150.t1 AT4G22880 30.723 332 212 8 16 330 9 339 1.43e-48 167
MS.gene024150.t1 AT4G22880 30.723 332 212 8 16 330 9 339 1.43e-48 167
MS.gene024150.t1 AT4G22880 30.723 332 212 8 16 330 9 339 1.43e-48 167
MS.gene024150.t1 AT3G12900 33.019 318 199 8 19 329 27 337 3.91e-48 166
MS.gene024150.t1 AT3G13610 29.938 324 213 8 16 332 29 345 2.05e-47 164
MS.gene024150.t1 AT3G55970 35.211 284 167 7 1 269 1 282 1.13e-46 160
MS.gene024150.t1 AT3G19010 33.648 318 193 9 28 328 7 323 3.21e-46 160
MS.gene024150.t1 AT3G19010 33.648 318 193 9 28 328 7 323 3.21e-46 160
MS.gene024150.t1 AT1G78550 27.811 338 236 5 17 348 21 356 1.15e-45 159
MS.gene024150.t1 AT2G30840 32.716 324 203 8 16 328 23 342 2.27e-44 156
MS.gene024150.t1 AT1G77330 31.667 300 177 7 45 330 2 287 2.45e-44 154
MS.gene024150.t1 AT4G25310 30.421 309 202 7 46 348 52 353 2.46e-44 156
MS.gene024150.t1 AT3G19000 31.045 335 198 10 22 329 1 329 3.78e-44 155
MS.gene024150.t1 AT4G16330 35.178 253 154 7 99 346 9 256 9.52e-44 152
MS.gene024150.t1 AT5G63590 34.000 300 180 9 40 326 6 300 1.82e-43 152
MS.gene024150.t1 AT4G25420 32.000 325 197 8 23 331 38 354 1.93e-43 154
MS.gene024150.t1 AT5G20400 30.584 291 193 7 46 331 45 331 1.89e-42 150
MS.gene024150.t1 AT1G49390 32.624 282 181 7 46 321 45 323 9.21e-42 149
MS.gene024150.t1 AT5G05600 35.714 266 155 9 16 269 29 290 2.36e-41 146
MS.gene024150.t1 AT3G61400 29.745 353 222 10 10 343 21 366 3.21e-41 148
MS.gene024150.t1 AT1G06620 30.606 330 213 8 12 331 25 348 5.64e-41 147
MS.gene024150.t1 AT1G60980 30.769 325 198 8 25 331 36 351 6.39e-41 147
MS.gene024150.t1 AT5G63600 29.851 335 206 7 1 330 1 311 1.96e-40 145
MS.gene024150.t1 AT2G30840 32.407 324 198 9 16 328 23 336 2.26e-40 145
MS.gene024150.t1 AT1G12010 30.034 293 185 8 46 331 7 286 6.77e-40 143
MS.gene024150.t1 AT5G20550 28.803 309 207 7 24 321 18 324 8.30e-40 144
MS.gene024150.t1 AT5G63600 30.060 336 205 8 1 330 1 312 1.47e-39 142
MS.gene024150.t1 AT1G03410 30.183 328 215 6 12 328 18 342 1.64e-39 143
MS.gene024150.t1 AT1G03410 30.183 328 215 6 12 328 55 379 2.95e-39 144
MS.gene024150.t1 AT5G12270 30.473 338 216 8 22 348 30 359 5.05e-39 142
MS.gene024150.t1 AT1G06650 27.844 334 224 7 12 332 24 353 5.59e-39 142
MS.gene024150.t1 AT5G54000 30.466 279 187 6 48 321 48 324 9.15e-39 141
MS.gene024150.t1 AT5G43440 29.305 331 219 7 9 328 19 345 1.62e-38 140
MS.gene024150.t1 AT1G15550 29.043 303 201 4 34 330 45 339 2.67e-38 140
MS.gene024150.t1 AT1G78550 29.455 275 189 4 77 348 6 278 4.43e-38 137
MS.gene024150.t1 AT5G51810 30.556 324 199 9 23 331 40 352 5.96e-38 139
MS.gene024150.t1 AT1G80340 30.584 291 188 4 45 329 49 331 6.83e-38 139
MS.gene024150.t1 AT1G06640 29.167 336 217 11 12 332 24 353 1.33e-37 138
MS.gene024150.t1 AT1G62380 28.522 291 192 7 46 331 7 286 1.44e-37 137
MS.gene024150.t1 AT2G30830 30.031 323 209 8 16 328 23 338 1.79e-37 138
MS.gene024150.t1 AT3G51240 35.484 217 136 4 94 307 3 218 1.84e-37 135
MS.gene024150.t1 AT5G43450 30.631 333 209 8 9 328 19 342 2.22e-37 137
MS.gene024150.t1 AT3G19010 31.132 318 171 10 28 328 7 293 4.97e-37 135
MS.gene024150.t1 AT1G49390 31.984 247 160 6 80 321 1 244 5.23e-37 134
MS.gene024150.t1 AT4G21690 29.429 333 199 11 11 329 23 333 1.11e-36 135
MS.gene024150.t1 AT1G04380 30.503 318 196 8 23 328 21 325 1.19e-36 135
MS.gene024150.t1 AT5G07200 29.819 332 211 8 17 331 29 355 1.56e-36 136
MS.gene024150.t1 AT1G05010 32.558 301 180 12 43 331 1 290 1.73e-36 134
MS.gene024150.t1 AT5G59530 30.488 328 206 10 17 330 27 346 2.30e-36 135
MS.gene024150.t1 AT5G59540 29.846 325 209 10 17 328 28 346 2.94e-36 135
MS.gene024150.t1 AT5G54000 30.081 246 166 5 80 321 1 244 3.92e-36 132
MS.gene024150.t1 AT1G80330 30.178 338 197 10 10 331 22 336 5.97e-36 134
MS.gene024150.t1 AT1G03400 28.571 322 210 6 16 328 22 332 6.38e-36 134
MS.gene024150.t1 AT1G06645 27.647 340 218 10 12 334 37 365 1.32e-35 133
MS.gene024150.t1 AT1G04350 28.829 333 213 9 12 330 20 342 4.01e-35 132
MS.gene024150.t1 AT3G19010 34.363 259 152 9 29 270 8 265 1.35e-34 129
MS.gene024150.t1 AT2G19590 30.408 319 192 13 39 347 4 302 2.94e-34 128
MS.gene024150.t1 AT1G44090 32.343 303 180 10 46 331 63 357 4.49e-34 129
MS.gene024150.t1 AT3G19000 30.909 275 157 10 22 269 1 269 5.70e-33 124
MS.gene024150.t1 AT5G63595 29.365 252 152 6 45 294 24 251 8.75e-33 123
MS.gene024150.t1 AT2G30840 32.567 261 164 6 16 268 23 279 1.14e-32 124
MS.gene024150.t1 AT4G21200 30.696 316 190 9 19 328 21 313 2.91e-32 123
MS.gene024150.t1 AT4G25300 33.155 187 108 3 164 348 91 262 7.45e-31 118
MS.gene024150.t1 AT1G03400 26.571 350 209 7 16 328 22 360 1.18e-30 120
MS.gene024150.t1 AT2G25450 26.113 337 231 7 1 322 1 334 2.09e-30 119
MS.gene024150.t1 AT3G49630 25.581 301 198 9 40 317 3 300 4.48e-30 117
MS.gene024150.t1 AT1G06620 31.698 265 168 7 12 269 25 283 4.98e-30 116
MS.gene024150.t1 AT1G78440 26.174 298 192 9 46 328 18 302 1.15e-29 116
MS.gene024150.t1 AT3G49620 24.172 302 205 8 39 318 27 326 1.27e-29 117
MS.gene024150.t1 AT4G25310 27.597 308 184 9 46 348 52 325 1.55e-29 115
MS.gene024150.t1 AT1G06650 29.323 266 175 5 12 268 24 285 2.13e-29 115
MS.gene024150.t1 AT5G43935 28.231 294 172 10 46 329 19 283 2.17e-29 115
MS.gene024150.t1 AT2G19590 31.119 286 168 12 72 347 21 287 2.58e-29 114
MS.gene024150.t1 AT1G06640 30.182 275 175 9 12 275 24 292 7.91e-29 114
MS.gene024150.t1 AT3G49630 25.532 282 193 8 50 317 18 296 1.11e-28 114
MS.gene024150.t1 AT3G61400 29.818 275 171 8 10 269 21 288 1.20e-28 112
MS.gene024150.t1 AT5G63580 34.498 229 140 7 45 269 18 240 2.16e-28 110
MS.gene024150.t1 AT5G43440 29.889 271 178 6 9 271 19 285 3.04e-28 111
MS.gene024150.t1 AT1G30040 26.645 304 196 9 37 328 24 312 4.39e-28 112
MS.gene024150.t1 AT5G63580 34.361 227 139 7 45 267 18 238 4.53e-28 110
MS.gene024150.t1 AT1G06640 30.566 265 167 9 12 265 24 282 1.22e-27 110
MS.gene024150.t1 AT4G25420 30.798 263 158 8 23 269 38 292 1.26e-27 110
MS.gene024150.t1 AT3G50210 26.403 303 192 10 45 319 7 306 1.29e-27 110
MS.gene024150.t1 AT3G50210 26.403 303 192 10 45 319 7 306 1.29e-27 110
MS.gene024150.t1 AT3G50210 26.403 303 192 10 45 319 7 306 1.29e-27 110
MS.gene024150.t1 AT5G43450 31.111 270 167 7 9 268 19 279 7.45e-26 105
MS.gene024150.t1 AT1G04380 31.008 258 156 7 23 271 21 265 2.14e-25 103
MS.gene024150.t1 AT2G34555 27.397 292 192 8 46 328 27 307 3.52e-25 104
MS.gene024150.t1 AT1G14130 28.369 282 188 5 46 324 9 279 7.26e-25 102
MS.gene024150.t1 AT1G50960 27.707 314 207 7 23 330 17 316 2.84e-24 102
MS.gene024150.t1 AT1G47990 27.213 305 180 10 46 328 15 299 3.21e-24 101
MS.gene024150.t1 AT5G59540 30.038 263 168 9 17 269 28 284 4.00e-24 100
MS.gene024150.t1 AT5G51810 29.811 265 160 9 23 272 40 293 4.60e-24 100
MS.gene024150.t1 AT1G02400 26.269 335 226 13 25 346 3 329 7.15e-24 100
MS.gene024150.t1 AT1G35190 29.391 279 140 10 40 293 6 252 9.67e-21 91.7
MS.gene024150.t1 AT3G46500 29.032 279 171 11 34 294 5 274 1.63e-20 91.3
MS.gene024150.t1 AT3G46500 28.777 278 171 11 34 293 5 273 2.58e-20 90.1
MS.gene024150.t1 AT1G52820 24.746 295 205 6 46 331 12 298 2.78e-20 90.5
MS.gene024150.t1 AT2G06960 37.580 157 81 6 178 332 1 142 3.93e-20 85.9
MS.gene024150.t1 AT1G14120 26.923 286 189 7 45 324 7 278 9.61e-20 89.0
MS.gene024150.t1 AT1G14120 26.923 286 189 7 45 324 7 278 9.61e-20 89.0
MS.gene024150.t1 AT1G14120 26.923 286 189 7 45 324 7 278 9.61e-20 89.0
MS.gene024150.t1 AT3G46490 28.881 277 167 11 43 296 14 283 1.10e-19 88.6
MS.gene024150.t1 AT3G46490 29.197 274 164 11 43 293 14 280 1.10e-19 89.0
MS.gene024150.t1 AT1G35190 29.930 284 155 11 40 293 6 275 1.35e-19 88.6
MS.gene024150.t1 AT1G28030 26.797 306 191 14 45 331 12 303 2.89e-18 84.7
MS.gene024150.t1 AT4G23340 26.198 313 206 10 41 342 5 303 4.31e-18 84.3
MS.gene024150.t1 AT3G49630 25.778 225 151 9 106 317 6 227 1.38e-17 81.6
MS.gene024150.t1 AT4G03070 24.759 311 190 10 46 332 14 304 1.90e-15 76.6
MS.gene024150.t1 AT1G30040 25.306 245 156 9 37 269 24 253 6.67e-15 74.3
MS.gene024150.t1 AT3G50210 26.977 215 135 8 114 319 23 224 8.08e-15 73.6
MS.gene024150.t1 AT5G51310 26.364 330 184 15 46 342 5 308 3.44e-14 72.8
MS.gene024150.t1 AT4G16765 32.258 155 93 7 151 294 48 201 2.77e-13 68.9
MS.gene024150.t1 AT4G16765 32.258 155 93 7 151 294 48 201 2.83e-13 69.3
MS.gene024150.t1 AT4G16765 32.258 155 93 7 151 294 48 201 2.83e-13 69.3
MS.gene024150.t1 AT4G16765 32.258 155 93 7 151 294 48 201 2.83e-13 69.3
MS.gene024150.t1 AT1G02400 26.070 257 172 11 25 271 3 251 4.70e-13 68.9
MS.gene024150.t1 AT4G23340 29.839 124 86 1 217 339 61 184 2.30e-11 63.2

Find 66 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGAGTTTGGTGTCTTTC+AGG 0.123173 7.1:-22844809 MS.gene024150:intron
TTATAGACTTGTCTAATTTA+AGG 0.135392 7.1:-22844879 MS.gene024150:CDS
GGAGCATTGGTTGTGCAATT+AGG 0.250337 7.1:-22842867 MS.gene024150:CDS
AAGAAGTAGAATCACTATTT+TGG 0.257138 7.1:+22845016 None:intergenic
CTTCAAATCCATCCACTTAT+AGG 0.261706 7.1:-22843550 MS.gene024150:intron
GAGCATTGGTTGTGCAATTA+GGG 0.278271 7.1:-22842866 MS.gene024150:CDS
TTACAAGGAGTTTAGCTTTA+GGG 0.289594 7.1:-22842679 MS.gene024150:CDS
TAAATTAGACAAGTCTATAA+TGG 0.294943 7.1:+22844882 None:intergenic
CTTACAAGGAGTTTAGCTTT+AGG 0.296393 7.1:-22842680 MS.gene024150:CDS
CTTCTTCTCCAAACTCGTTC+AGG 0.296546 7.1:-22842942 MS.gene024150:CDS
TATAGACTTGTCTAATTTAA+GGG 0.301732 7.1:-22844878 MS.gene024150:CDS
CGAATTGCTTGCAAGGAGTT+TGG 0.301965 7.1:-22844820 MS.gene024150:CDS
AGACTTGTTCCATATCTTAC+AGG 0.314497 7.1:+22843659 None:intergenic
TTTCTAGCCCTGAACGAGTT+TGG 0.322366 7.1:+22842934 None:intergenic
ATCCATCCTCACTCAGATTA+TGG 0.324957 7.1:-22842975 MS.gene024150:CDS
ATATGAATCCAATCTGCTAT+TGG 0.355852 7.1:+22843578 None:intergenic
AGTAACTTTGGTTTAATCCT+AGG 0.364757 7.1:+22843081 None:intergenic
GTTCACAAACCTGTAAGATA+TGG 0.390443 7.1:-22843668 MS.gene024150:CDS
TTTCTTCATGCAAGTAACTT+TGG 0.398779 7.1:+22843069 None:intergenic
TACTTGCATGAAGAAATAAA+TGG 0.422359 7.1:-22843062 MS.gene024150:CDS
CCTAAGGTGAGTCCTGGTTC+AGG 0.433121 7.1:+22842999 None:intergenic
AAATTAGACAAGTCTATAAT+GGG 0.440124 7.1:+22844883 None:intergenic
AGTTTGGAGAAGAAGTGTTA+TGG 0.444446 7.1:+22842950 None:intergenic
CTAAACTCCTTGTAAGCCTT+AGG 0.469663 7.1:+22842687 None:intergenic
GTGACATGATGAGTAATACT+AGG 0.484274 7.1:+22844913 None:intergenic
TTCTTCTCCAAACTCGTTCA+GGG 0.486146 7.1:-22842941 MS.gene024150:CDS
CTATAAGTGGATGGATTTGA+AGG 0.493857 7.1:+22843551 None:intergenic
TAATAGTACGCACCTATAAG+TGG 0.502036 7.1:+22843538 None:intergenic
ACCAATGCTCCATCAACAAA+AGG 0.502911 7.1:+22842879 None:intergenic
ACTCTCATCCAATAGCAGAT+TGG 0.505010 7.1:-22843586 MS.gene024150:CDS
TGTGCAATTAGGGGATCAAA+TGG 0.505759 7.1:-22842856 MS.gene024150:CDS
GCTCCATCAACAAAAGGAAC+AGG 0.512942 7.1:+22842885 None:intergenic
TTGTTGTAATGATGTTTCAA+AGG 0.513168 7.1:-22842640 MS.gene024150:CDS
CCTGAACCAGGACTCACCTT+AGG 0.514370 7.1:-22842999 MS.gene024150:CDS
GTAATGATGTTTCAAAGGGA+AGG 0.517706 7.1:-22842635 MS.gene024150:CDS
TGTTGTAATGATGTTTCAAA+GGG 0.518081 7.1:-22842639 MS.gene024150:CDS
TTGTTGACTCATCAATTCCA+TGG 0.526078 7.1:+22843768 None:intergenic
GAGTCTTCATAGTCTTGCTA+TGG 0.530622 7.1:-22842754 MS.gene024150:CDS
CGAAATTCGAATTGCTTGCA+AGG 0.534138 7.1:-22844827 MS.gene024150:CDS
AGTCCTGGTTCAGGACATGT+AGG 0.540503 7.1:+22843008 None:intergenic
AACCATAATCTGAGTGAGGA+TGG 0.545774 7.1:+22842973 None:intergenic
GAGGTATAGAAGACACTCCT+TGG 0.545895 7.1:+22844965 None:intergenic
TGGATTCCTAAGGTGAGTCC+TGG 0.545971 7.1:+22842993 None:intergenic
CGTTGATGATCAGCATCCTA+AGG 0.546556 7.1:-22842703 MS.gene024150:CDS
TCAGCATCCTAAGGCTTACA+AGG 0.547954 7.1:-22842694 MS.gene024150:CDS
CAAATGGAAGTTCTTAGCAA+TGG 0.558849 7.1:-22842840 MS.gene024150:CDS
TACCCTACATGTCCTGAACC+AGG 0.576430 7.1:-22843011 MS.gene024150:CDS
TTGAAACATCATTACAACAA+AGG 0.577672 7.1:+22842643 None:intergenic
CAAGTCTATAATGGGAAGAG+TGG 0.582630 7.1:+22844891 None:intergenic
ATACTAGGGCGTTGTGATGG+AGG 0.583249 7.1:+22844928 None:intergenic
GTAATACTAGGGCGTTGTGA+TGG 0.587207 7.1:+22844925 None:intergenic
GAAATAATATTTGAAAGCCT+AGG 0.590453 7.1:-22843098 MS.gene024150:CDS
TCATCAACGAGTTCAAGTGC+TGG 0.596231 7.1:+22842717 None:intergenic
TAGCAGATTGGATTCATATG+TGG 0.597890 7.1:-22843574 MS.gene024150:CDS
TTGTTGTAGGTAATTAACCA+TGG 0.605717 7.1:-22843785 MS.gene024150:intron
AACAAGTCTTAATCAAGCCA+AGG 0.612039 7.1:-22843645 MS.gene024150:CDS
AGTACGCACCTATAAGTGGA+TGG 0.618806 7.1:+22843542 None:intergenic
GGAGGAAGTATGTAACATTG+AGG 0.624135 7.1:+22844946 None:intergenic
GTCCTGGTTCAGGACATGTA+GGG 0.629099 7.1:+22843009 None:intergenic
TGACATGATGAGTAATACTA+GGG 0.638617 7.1:+22844914 None:intergenic
AGCATTGGTTGTGCAATTAG+GGG 0.640696 7.1:-22842865 MS.gene024150:CDS
TTGCATGAAGAAATAAATGG+AGG 0.646872 7.1:-22843059 MS.gene024150:CDS
GCTATGAGTCTAAGTGACCA+AGG 0.658478 7.1:-22844982 MS.gene024150:CDS
TGAGTGAGGATGGATTCCTA+AGG 0.674085 7.1:+22842983 None:intergenic
GAAGATGGGAAAGTATGCAG+TGG 0.692233 7.1:-22843150 MS.gene024150:CDS
ATGGAACCATAATCTGAGTG+AGG 0.720940 7.1:+22842969 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAGATTAAAATCTA+AGG - chr7.1:22843396-22843415 MS.gene024150:intron 10.0%
!! TAAATAAGATTAAAATCTAA+GGG - chr7.1:22843397-22843416 MS.gene024150:intron 10.0%
!!! TGAATATATTGTTTTTATTT+TGG + chr7.1:22843487-22843506 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTGACATA+AGG + chr7.1:22844231-22844250 None:intergenic 10.0%
!!! AATGTGTTTTTATCAATATA+AGG - chr7.1:22842975-22842994 MS.gene024150:CDS 15.0%
!!! ATGTGTTTTTATCAATATAA+GGG - chr7.1:22842976-22842995 MS.gene024150:CDS 15.0%
!! AAATTAGACAAGTCTATAAT+GGG + chr7.1:22842752-22842771 None:intergenic 20.0%
!! ACATGTACTAAAATAAACAT+AGG + chr7.1:22843051-22843070 None:intergenic 20.0%
!! ATATAGTAATTCTGATTTCT+CGG - chr7.1:22843506-22843525 MS.gene024150:intron 20.0%
!! GGTAAAAATTAATACATTCT+TGG - chr7.1:22842844-22842863 MS.gene024150:CDS 20.0%
!! TAAATTAGACAAGTCTATAA+TGG + chr7.1:22842753-22842772 None:intergenic 20.0%
!! TATAGACTTGTCTAATTTAA+GGG - chr7.1:22842754-22842773 MS.gene024150:CDS 20.0%
!! TCATTCCATTTAAATTTCTA+AGG + chr7.1:22844263-22844282 None:intergenic 20.0%
!! TTATAGACTTGTCTAATTTA+AGG - chr7.1:22842753-22842772 MS.gene024150:CDS 20.0%
!!! ACTTTTCCAAAAATGATTAT+AGG + chr7.1:22843188-22843207 None:intergenic 20.0%
!!! AGTTTTGCAAAACAAATTAA+TGG - chr7.1:22844512-22844531 MS.gene024150:intron 20.0%
!!! CAAAATGAATGTTTTTGATA+GGG - chr7.1:22844458-22844477 MS.gene024150:intron 20.0%
!!! TTTTTTTATTGCAATGTCAT+AGG + chr7.1:22842914-22842933 None:intergenic 20.0%
!!! TTTTTTTGACATAAGGTATA+AGG + chr7.1:22844224-22844243 None:intergenic 20.0%
! AAAATGCTAGATATCAAGAA+TGG + chr7.1:22843464-22843483 None:intergenic 25.0%
! AGGAAAATAGAGTAAAGAAA+TGG + chr7.1:22843534-22843553 None:intergenic 25.0%
! CGAAGACAAAAACAAAAATT+GGG - chr7.1:22844722-22844741 MS.gene024150:intron 25.0%
! GAAATAATATTTGAAAGCCT+AGG - chr7.1:22844534-22844553 MS.gene024150:intron 25.0%
! TACTTGCATGAAGAAATAAA+TGG - chr7.1:22844570-22844589 MS.gene024150:intron 25.0%
! TAGATGATTACAATGTCATT+GGG + chr7.1:22843677-22843696 None:intergenic 25.0%
! TATAGTAATTCTGATTTCTC+GGG - chr7.1:22843507-22843526 MS.gene024150:intron 25.0%
! TCGAAGACAAAAACAAAAAT+TGG - chr7.1:22844721-22844740 MS.gene024150:intron 25.0%
! TCTTGCCTTAGAAATTTAAA+TGG - chr7.1:22844255-22844274 MS.gene024150:intron 25.0%
! TGTTGTAATGATGTTTCAAA+GGG - chr7.1:22844993-22845012 MS.gene024150:CDS 25.0%
! TTGAAACATCATTACAACAA+AGG + chr7.1:22844992-22845011 None:intergenic 25.0%
! TTGCACTACTATATATAGTA+AGG - chr7.1:22843626-22843645 MS.gene024150:CDS 25.0%
! TTGTTGTAATGATGTTTCAA+AGG - chr7.1:22844992-22845011 MS.gene024150:CDS 25.0%
!! AAGAAGTAGAATCACTATTT+TGG + chr7.1:22842619-22842638 None:intergenic 25.0%
!! ACCTTTGTTTATAAATGAGT+CGG - chr7.1:22843579-22843598 MS.gene024150:CDS 25.0%
!! TTCATTCGTCTTCAATTTTA+TGG - chr7.1:22843769-22843788 MS.gene024150:CDS 25.0%
!!! GCAAAATGAATGTTTTTGAT+AGG - chr7.1:22844457-22844476 MS.gene024150:intron 25.0%
!!! TATTGGCTAACATTAGTTTT+GGG + chr7.1:22843308-22843327 None:intergenic 25.0%
!!! TTATTGGCTAACATTAGTTT+TGG + chr7.1:22843309-22843328 None:intergenic 25.0%
ATATGAATCCAATCTGCTAT+TGG + chr7.1:22844057-22844076 None:intergenic 30.0%
CTAGATGATTACAATGTCAT+TGG + chr7.1:22843678-22843697 None:intergenic 30.0%
TCCGACTCATTTATAAACAA+AGG + chr7.1:22843583-22843602 None:intergenic 30.0%
TGACATGATGAGTAATACTA+GGG + chr7.1:22842721-22842740 None:intergenic 30.0%
TTGCATGAAGAAATAAATGG+AGG - chr7.1:22844573-22844592 MS.gene024150:intron 30.0%
TTGTTGTAGGTAATTAACCA+TGG - chr7.1:22843847-22843866 MS.gene024150:intron 30.0%
TTTCTTCATGCAAGTAACTT+TGG + chr7.1:22844566-22844585 None:intergenic 30.0%
! AGTAACTTTGGTTTAATCCT+AGG + chr7.1:22844554-22844573 None:intergenic 30.0%
! ATACAATGTATCTCGATTTG+AGG + chr7.1:22843554-22843573 None:intergenic 30.0%
! CAGATGCCTATAATCATTTT+TGG - chr7.1:22843179-22843198 MS.gene024150:intron 30.0%
! CCACTTTAAAAATACAAGTG+AGG - chr7.1:22843715-22843734 MS.gene024150:CDS 30.0%
! CTTGCTATGGATAAAAAGAT+AGG - chr7.1:22844891-22844910 MS.gene024150:CDS 30.0%
!! CCTCACTTGTATTTTTAAAG+TGG + chr7.1:22843718-22843737 None:intergenic 30.0%
!! TTACAAGGAGTTTAGCTTTA+GGG - chr7.1:22844953-22844972 MS.gene024150:CDS 30.0%
AACAAGTCTTAATCAAGCCA+AGG - chr7.1:22843987-22844006 MS.gene024150:intron 35.0%
AGATAACGCATTGCTCTTTA+AGG - chr7.1:22842946-22842965 MS.gene024150:CDS 35.0%
ATAACGCATTGCTCTTTAAG+GGG - chr7.1:22842948-22842967 MS.gene024150:CDS 35.0%
CAAATGGAAGTTCTTAGCAA+TGG - chr7.1:22844792-22844811 MS.gene024150:intron 35.0%
CAATAAAATCTCAGTCTAGC+CGG - chr7.1:22843323-22843342 MS.gene024150:intron 35.0%
CTTCAAATCCATCCACTTAT+AGG - chr7.1:22844082-22844101 MS.gene024150:intron 35.0%
GATAACGCATTGCTCTTTAA+GGG - chr7.1:22842947-22842966 MS.gene024150:CDS 35.0%
GTAATGATGTTTCAAAGGGA+AGG - chr7.1:22844997-22845016 MS.gene024150:CDS 35.0%
GTGACATGATGAGTAATACT+AGG + chr7.1:22842722-22842741 None:intergenic 35.0%
GTTCACAAACCTGTAAGATA+TGG - chr7.1:22843964-22843983 MS.gene024150:intron 35.0%
TAATAGTACGCACCTATAAG+TGG + chr7.1:22844097-22844116 None:intergenic 35.0%
TAGCAGATTGGATTCATATG+TGG - chr7.1:22844058-22844077 MS.gene024150:intron 35.0%
TATGACACTCACATTGTTGT+AGG - chr7.1:22843834-22843853 MS.gene024150:intron 35.0%
TGATGAATTCAGGAATGACA+TGG + chr7.1:22843434-22843453 None:intergenic 35.0%
! AGACTTGTTCCATATCTTAC+AGG + chr7.1:22843976-22843995 None:intergenic 35.0%
! CTATAAGTGGATGGATTTGA+AGG + chr7.1:22844084-22844103 None:intergenic 35.0%
! GTTTTTGATAGGGAGAAGAT+GGG - chr7.1:22844468-22844487 MS.gene024150:intron 35.0%
! TGGATTTTCGTGATGAATTC+AGG + chr7.1:22843444-22843463 None:intergenic 35.0%
!! AGTTTGGAGAAGAAGTGTTA+TGG + chr7.1:22844685-22844704 None:intergenic 35.0%
!! CTTACAAGGAGTTTAGCTTT+AGG - chr7.1:22844952-22844971 MS.gene024150:CDS 35.0%
!! TGTTTTTGATAGGGAGAAGA+TGG - chr7.1:22844467-22844486 MS.gene024150:intron 35.0%
!! TTCTTGGTTTGCATTTCATG+AGG - chr7.1:22842860-22842879 MS.gene024150:CDS 35.0%
!! TTGTTGACTCATCAATTCCA+TGG + chr7.1:22843867-22843886 None:intergenic 35.0%
!!! AAGCGCATTTTTTCATCATG+AGG + chr7.1:22843931-22843950 None:intergenic 35.0%
!!! AGCGCATTTTTTCATCATGA+GGG + chr7.1:22843930-22843949 None:intergenic 35.0%
AACCATAATCTGAGTGAGGA+TGG + chr7.1:22844662-22844681 None:intergenic 40.0%
ACACCAACACTTCAAATCGA+AGG - chr7.1:22844301-22844320 MS.gene024150:intron 40.0%
ACCAATGCTCCATCAACAAA+AGG + chr7.1:22844756-22844775 None:intergenic 40.0%
ACTCTCATCCAATAGCAGAT+TGG - chr7.1:22844046-22844065 MS.gene024150:intron 40.0%
ATCCATCCTCACTCAGATTA+TGG - chr7.1:22844657-22844676 MS.gene024150:intron 40.0%
ATGGAACCATAATCTGAGTG+AGG + chr7.1:22844666-22844685 None:intergenic 40.0%
CCAGCAAAAAACTTCATCCT+TGG + chr7.1:22844007-22844026 None:intergenic 40.0%
CGAAATTCGAATTGCTTGCA+AGG - chr7.1:22842805-22842824 MS.gene024150:CDS 40.0%
CTAAACTCCTTGTAAGCCTT+AGG + chr7.1:22844948-22844967 None:intergenic 40.0%
TGTGCAATTAGGGGATCAAA+TGG - chr7.1:22844776-22844795 MS.gene024150:intron 40.0%
TTCTTCTCCAAACTCGTTCA+GGG - chr7.1:22844691-22844710 MS.gene024150:intron 40.0%
! ACACCTTCGATTTGAAGTGT+TGG + chr7.1:22844307-22844326 None:intergenic 40.0%
! CAAGTCTATAATGGGAAGAG+TGG + chr7.1:22842744-22842763 None:intergenic 40.0%
! CGGCTAGACTGAGATTTTAT+TGG + chr7.1:22843325-22843344 None:intergenic 40.0%
! GAGTCTTCATAGTCTTGCTA+TGG - chr7.1:22844878-22844897 MS.gene024150:CDS 40.0%
! GGAGGAAGTATGTAACATTG+AGG + chr7.1:22842689-22842708 None:intergenic 40.0%
! GTTCCTGTTCCTTTTGTTGA+TGG - chr7.1:22844744-22844763 MS.gene024150:intron 40.0%
!! AGCATTGGTTGTGCAATTAG+GGG - chr7.1:22844767-22844786 MS.gene024150:intron 40.0%
!! GAGCATTGGTTGTGCAATTA+GGG - chr7.1:22844766-22844785 MS.gene024150:intron 40.0%
!! TCCTTTTGTTGATGGAGCAT+TGG - chr7.1:22844752-22844771 MS.gene024150:intron 40.0%
!!! CCAAGGATGAAGTTTTTTGC+TGG - chr7.1:22844004-22844023 MS.gene024150:intron 40.0%
!!! GCATTTTTTCATCATGAGGG+AGG + chr7.1:22843927-22843946 None:intergenic 40.0%
AGTACGCACCTATAAGTGGA+TGG + chr7.1:22844093-22844112 None:intergenic 45.0%
CGAATTGCTTGCAAGGAGTT+TGG - chr7.1:22842812-22842831 MS.gene024150:CDS 45.0%
CTTCTTCTCCAAACTCGTTC+AGG - chr7.1:22844690-22844709 MS.gene024150:intron 45.0%
GAGGTATAGAAGACACTCCT+TGG + chr7.1:22842670-22842689 None:intergenic 45.0%
GCTATGAGTCTAAGTGACCA+AGG - chr7.1:22842650-22842669 MS.gene024150:CDS 45.0%
GCTCCATCAACAAAAGGAAC+AGG + chr7.1:22844750-22844769 None:intergenic 45.0%
TCAGCATCCTAAGGCTTACA+AGG - chr7.1:22844938-22844957 MS.gene024150:CDS 45.0%
TCAGTCTAGCCGGAAATCAT+GGG - chr7.1:22843333-22843352 MS.gene024150:intron 45.0%
TCATCAACGAGTTCAAGTGC+TGG + chr7.1:22844918-22844937 None:intergenic 45.0%
! GAAGATGGGAAAGTATGCAG+TGG - chr7.1:22844482-22844501 MS.gene024150:intron 45.0%
! TGAGTGAGGATGGATTCCTA+AGG + chr7.1:22844652-22844671 None:intergenic 45.0%
! TTTCTAGCCCTGAACGAGTT+TGG + chr7.1:22844701-22844720 None:intergenic 45.0%
!! CAAGGAGTTTGGTGTCTTTC+AGG - chr7.1:22842823-22842842 MS.gene024150:CDS 45.0%
!! CGTTGATGATCAGCATCCTA+AGG - chr7.1:22844929-22844948 MS.gene024150:CDS 45.0%
!! GGAGCATTGGTTGTGCAATT+AGG - chr7.1:22844765-22844784 MS.gene024150:intron 45.0%
!! GTAATACTAGGGCGTTGTGA+TGG + chr7.1:22842710-22842729 None:intergenic 45.0%
AGTCCTGGTTCAGGACATGT+AGG + chr7.1:22844627-22844646 None:intergenic 50.0%
CAGTCTAGCCGGAAATCATG+GGG - chr7.1:22843334-22843353 MS.gene024150:intron 50.0%
CTCAGTCTAGCCGGAAATCA+TGG - chr7.1:22843332-22843351 MS.gene024150:intron 50.0%
GTCCTGGTTCAGGACATGTA+GGG + chr7.1:22844626-22844645 None:intergenic 50.0%
TACCCTACATGTCCTGAACC+AGG - chr7.1:22844621-22844640 MS.gene024150:intron 50.0%
TGGATTCCTAAGGTGAGTCC+TGG + chr7.1:22844642-22844661 None:intergenic 50.0%
!! ATACTAGGGCGTTGTGATGG+AGG + chr7.1:22842707-22842726 None:intergenic 50.0%
ACCCACCACCCCATGATTTC+CGG + chr7.1:22843345-22843364 None:intergenic 55.0%
CCTAAGGTGAGTCCTGGTTC+AGG + chr7.1:22844636-22844655 None:intergenic 55.0%
CCTGAACCAGGACTCACCTT+AGG - chr7.1:22844633-22844652 MS.gene024150:intron 55.0%
TCTAGCCGGAAATCATGGGG+TGG - chr7.1:22843337-22843356 MS.gene024150:intron 55.0%
AGCCGGAAATCATGGGGTGG+TGG - chr7.1:22843340-22843359 MS.gene024150:intron 60.0%
GCCGGAAATCATGGGGTGGT+GGG - chr7.1:22843341-22843360 MS.gene024150:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 22842611 22845043 22842611 ID=MS.gene024150
chr7.1 mRNA 22842611 22845043 22842611 ID=MS.gene024150.t1;Parent=MS.gene024150
chr7.1 exon 22844810 22845043 22844810 ID=MS.gene024150.t1.exon1;Parent=MS.gene024150.t1
chr7.1 CDS 22844810 22845043 22844810 ID=cds.MS.gene024150.t1;Parent=MS.gene024150.t1
chr7.1 exon 22843551 22843798 22843551 ID=MS.gene024150.t1.exon2;Parent=MS.gene024150.t1
chr7.1 CDS 22843551 22843798 22843551 ID=cds.MS.gene024150.t1;Parent=MS.gene024150.t1
chr7.1 exon 22842611 22843175 22842611 ID=MS.gene024150.t1.exon3;Parent=MS.gene024150.t1
chr7.1 CDS 22842611 22843175 22842611 ID=cds.MS.gene024150.t1;Parent=MS.gene024150.t1
Gene Sequence

>MS.gene024150

ATGGACCAAAATAGTGATTCTACTTCTTCATTTACTAGTGCTATGAGTCTAAGTGACCAAGGAGTGTCTTCTATACCTCAATGTTACATACTTCCTCCATCACAACGCCCTAGTATTACTCATCATGTCACCACTCTTCCCATTATAGACTTGTCTAATTTAAGGGAACAATCTCTTAGATCTCAAACGATCATCGAAATTCGAATTGCTTGCAAGGAGTTTGGTGTCTTTCAGGTAAAAATTAATACATTCTTGGTTTGCATTTCATGAGGATTTGAAATCACTTGTTATTTTTTTGTTCCTATGACATTGCAATAAAAAAATTAACAACTAAAAGATAACGCATTGCTCTTTAAGGGGAAAGAATGTGTTTTTATCAATATAAGGGAAAAAAAGTTTGATGACTTGTTAAGTTTATTTTATTTTTGACAAAACGTCCTATGTTTATTTTAGTACATGTAAATATACACGTGTATTGATATATTGTTTGACATTAAATAAACACATTTATATTATTATACACACACACACGTTAATTTGTATACATTAATTTTTATTTTATTAATAGCAGATGCCTATAATCATTTTTGGAAAAGTATATGCTAGTAAAGTAGTAACAATAATATATTCGTATTTATAAAATAAAATAAAAGAGCAATGCTATTTATCAAGAAAGATTTTATCAAGAAATTGTCCCAAAACTAATGTTAGCCAATAAAATCTCAGTCTAGCCGGAAATCATGGGGTGGTGGGTGTTATATATATATATATATTATGAAACTTTAATAAATAAGATTAAAATCTAAGGGTGATTATTCTGCCATGTCATTCCTGAATTCATCACGAAAATCCATTCTTGATATCTAGCATTTTCCAAAATAAAAACAATATATTCATATAGTAATTCTGATTTCTCGGGACCATTTCTTTACTCTATTTTCCTCAAATCGAGATACATTGTATTTGTCACCTTTGTTTATAAATGAGTCGGATATAGAAGCAACTATTGTTTTCATTGCACTACTATATATAGTAAGGTGCTTGTCTTGACTTCACTTTTTCTCCCAATGACATTGTAATCATCTAGTGAATTGAAAATCTAAGCCACTTTAAAAATACAAGTGAGGAGCTACATATATTGATTCTCTACAATCTACATTCATTCGTCTTCAATTTTATGGTCACTTAATTTCATTCATTAACAATTATTAATTAAGTTAACATATGACACTCACATTGTTGTAGGTAATTAACCATGGAATTGATGAGTCAACAATGAAAGATGCTCAGCAAGTTGCAACAGAATTCTTCAACCTCCCTCATGATGAAAAAATGCGCTTATTTTCTGATGATGTTCACAAACCTGTAAGATATGGAACAAGTCTTAATCAAGCCAAGGATGAAGTTTTTTGCTGGAGAGATTTCATCAAACATTACTCTCATCCAATAGCAGATTGGATTCATATGTGGCCTTCAAATCCATCCACTTATAGGTGCGTACTATTAATGTAGACATTTTCAAATTATAATGCAAAATATTCAATCAACAATATTTTTTTTAAGAAGAACAATAAATTTATTAAAATAACTTTTTCTTGATATGAAAAGCTCCTTATACCTTATGTCAAAAAAAAAAAAAAAACTTCTTGCCTTAGAAATTTAAATGGAATGATGAAGTTTGACTTATCTAACACCAACACTTCAAATCGAAGGTGTGTCAAATGTTAAAGCACGTGTTAGTGAAAAGCATGTGTCAGTCAATTTTTTTTAATAAATTATCAGTATTGTCTACGTGTGTCATGTCTGTATCTATGTTAGTACTTCTATTGATCTGTAAAATTAATGAGCAAAATGAATGTTTTTGATAGGGAGAAGATGGGAAAGTATGCAGTGGCAACACAAGTTTTGCAAAACAAATTAATGGAAATAATATTTGAAAGCCTAGGATTAAACCAAAGTTACTTGCATGAAGAAATAAATGGAGGATCACAAGTAGTAGCAGTGAACTGCTACCCTACATGTCCTGAACCAGGACTCACCTTAGGAATCCATCCTCACTCAGATTATGGTTCCATAACACTTCTTCTCCAAACTCGTTCAGGGCTAGAAATCGAAGACAAAAACAAAAATTGGGTTCCTGTTCCTTTTGTTGATGGAGCATTGGTTGTGCAATTAGGGGATCAAATGGAAGTTCTTAGCAATGGACAGTATAAGAGTGTGATTCATAGAGCAATTGTTAATGAAGATGAGAAGAGATTTTCTATAGTGAGTCTTCATAGTCTTGCTATGGATAAAAAGATAGGTCCAGCACTTGAACTCGTTGATGATCAGCATCCTAAGGCTTACAAGGAGTTTAGCTTTAGGGAATTTCTTGAATTCCTTTGTTGTAATGATGTTTCAAAGGGAAGGTTTCTTGATACTTTGAAACTATGA
Protein sequence

>MS.gene024150.t1

MDQNSDSTSSFTSAMSLSDQGVSSIPQCYILPPSQRPSITHHVTTLPIIDLSNLREQSLRSQTIIEIRIACKEFGVFQVINHGIDESTMKDAQQVATEFFNLPHDEKMRLFSDDVHKPVRYGTSLNQAKDEVFCWRDFIKHYSHPIADWIHMWPSNPSTYREKMGKYAVATQVLQNKLMEIIFESLGLNQSYLHEEINGGSQVVAVNCYPTCPEPGLTLGIHPHSDYGSITLLLQTRSGLEIEDKNKNWVPVPFVDGALVVQLGDQMEVLSNGQYKSVIHRAIVNEDEKRFSIVSLHSLAMDKKIGPALELVDDQHPKAYKEFSFREFLEFLCCNDVSKGRFLDTLKL