Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041734.t1 | XP_003591999.1 | 100 | 555 | 0 | 0 | 1 | 555 | 1 | 555 | 0.00E+00 | 1152.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041734.t1 | Q67XD9 | 83.7 | 558 | 85 | 4 | 2 | 555 | 3 | 558 | 1.4e-282 | 973.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041734.t1 | G7IAG4 | 100.0 | 555 | 0 | 0 | 1 | 555 | 1 | 555 | 0.0e+00 | 1152.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006020 | MS.gene041734 | PPI |
| MS.gene33980 | MS.gene041734 | PPI |
| MS.gene041734 | MS.gene97437 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041734.t1 | MTR_1g096140 | 100.000 | 555 | 0 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1157 |
| MS.gene041734.t1 | MTR_1g095970 | 86.126 | 555 | 57 | 2 | 1 | 555 | 19 | 553 | 0.0 | 978 |
| MS.gene041734.t1 | MTR_3g117710 | 73.369 | 567 | 132 | 6 | 2 | 554 | 12 | 573 | 0.0 | 874 |
| MS.gene041734.t1 | MTR_4g075540 | 69.866 | 448 | 129 | 4 | 47 | 493 | 9 | 451 | 0.0 | 656 |
| MS.gene041734.t1 | MTR_8g092170 | 58.952 | 458 | 182 | 2 | 91 | 543 | 165 | 621 | 0.0 | 586 |
| MS.gene041734.t1 | MTR_7g111890 | 59.062 | 469 | 186 | 4 | 79 | 543 | 116 | 582 | 0.0 | 577 |
| MS.gene041734.t1 | MTR_1g084610 | 59.823 | 453 | 176 | 3 | 92 | 540 | 114 | 564 | 0.0 | 575 |
| MS.gene041734.t1 | MTR_4g123030 | 53.714 | 525 | 226 | 6 | 34 | 543 | 118 | 640 | 0.0 | 572 |
| MS.gene041734.t1 | MTR_4g123030 | 59.945 | 362 | 137 | 3 | 91 | 446 | 184 | 543 | 7.41e-154 | 451 |
| MS.gene041734.t1 | MTR_3g015100 | 57.792 | 154 | 63 | 1 | 293 | 446 | 2 | 153 | 6.31e-62 | 201 |
| MS.gene041734.t1 | MTR_3g025460 | 64.286 | 70 | 25 | 0 | 129 | 198 | 91 | 160 | 2.69e-19 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041734.t1 | AT4G09510 | 83.692 | 558 | 85 | 4 | 2 | 555 | 3 | 558 | 0.0 | 973 |
| MS.gene041734.t1 | AT1G35580 | 82.852 | 554 | 88 | 4 | 1 | 553 | 1 | 548 | 0.0 | 962 |
| MS.gene041734.t1 | AT1G35580 | 82.852 | 554 | 88 | 4 | 1 | 553 | 1 | 548 | 0.0 | 962 |
| MS.gene041734.t1 | AT1G22650 | 82.936 | 545 | 79 | 5 | 10 | 554 | 4 | 534 | 0.0 | 945 |
| MS.gene041734.t1 | AT4G34860 | 77.660 | 564 | 105 | 6 | 6 | 555 | 15 | 571 | 0.0 | 907 |
| MS.gene041734.t1 | AT4G34860 | 77.660 | 564 | 105 | 6 | 6 | 555 | 15 | 571 | 0.0 | 907 |
| MS.gene041734.t1 | AT4G34860 | 77.660 | 564 | 105 | 6 | 6 | 555 | 15 | 571 | 0.0 | 907 |
| MS.gene041734.t1 | AT1G72000 | 82.329 | 498 | 86 | 2 | 58 | 554 | 3 | 499 | 0.0 | 874 |
| MS.gene041734.t1 | AT4G09510 | 82.391 | 460 | 75 | 4 | 2 | 457 | 3 | 460 | 0.0 | 790 |
| MS.gene041734.t1 | AT1G35580 | 81.562 | 461 | 78 | 4 | 1 | 460 | 1 | 455 | 0.0 | 787 |
| MS.gene041734.t1 | AT1G22650 | 81.473 | 448 | 69 | 5 | 10 | 457 | 4 | 437 | 0.0 | 764 |
| MS.gene041734.t1 | AT5G22510 | 59.477 | 459 | 180 | 2 | 91 | 544 | 134 | 591 | 0.0 | 587 |
| MS.gene041734.t1 | AT5G22510 | 59.477 | 459 | 180 | 2 | 91 | 544 | 134 | 591 | 0.0 | 587 |
| MS.gene041734.t1 | AT1G56560 | 58.114 | 456 | 187 | 2 | 91 | 543 | 134 | 588 | 0.0 | 576 |
| MS.gene041734.t1 | AT3G06500 | 59.041 | 459 | 180 | 3 | 91 | 543 | 182 | 638 | 0.0 | 566 |
| MS.gene041734.t1 | AT3G05820 | 56.987 | 458 | 191 | 3 | 91 | 543 | 150 | 606 | 0.0 | 557 |
| MS.gene041734.t1 | AT3G06500 | 58.376 | 394 | 156 | 3 | 156 | 543 | 48 | 439 | 2.54e-166 | 481 |
| MS.gene041734.t1 | AT3G05820 | 57.341 | 361 | 148 | 3 | 91 | 446 | 150 | 509 | 2.43e-147 | 434 |
Find 131 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCCTTGCAGGGTGTTTA+TGG | 0.100926 | 1.1:-69151988 | MS.gene041734:intron |
| GATACTCTTATTGCAGATTT+TGG | 0.135753 | 1.1:-69152852 | MS.gene041734:CDS |
| CTCCTGTTGACTCTGGATTC+TGG | 0.209312 | 1.1:-69152806 | MS.gene041734:CDS |
| CGGTTCACCATTCATCAAAA+AGG | 0.261228 | 1.1:+69153007 | None:intergenic |
| TGATTAAAAGATCATCTTCT+TGG | 0.264825 | 1.1:-69150799 | MS.gene041734:CDS |
| ATGGTCTATTGCGGGTTATT+TGG | 0.279758 | 1.1:-69150897 | MS.gene041734:CDS |
| AGCAACTAAATGACATTTAT+CGG | 0.283643 | 1.1:-69151804 | MS.gene041734:CDS |
| TGGATGGGCATATGGGAATT+AGG | 0.284454 | 1.1:-69154635 | MS.gene041734:CDS |
| CACTCGTGACTTTCTATTGC+AGG | 0.287232 | 1.1:+69151505 | None:intergenic |
| CACGAGTGGCGAATTGTTAC+TGG | 0.296374 | 1.1:-69151490 | MS.gene041734:CDS |
| GTTAAAGACACTACATCTTC+AGG | 0.309497 | 1.1:-69152964 | MS.gene041734:CDS |
| TTCACATGAGAAGCTACTTT+TGG | 0.315196 | 1.1:-69151837 | MS.gene041734:CDS |
| ATCCAATGGTTGCCGATGCC+TGG | 0.318785 | 1.1:-69154380 | MS.gene041734:CDS |
| AGTTTACCATCGTAATATTC+AGG | 0.320203 | 1.1:+69150959 | None:intergenic |
| CCAACTCTGCTTTGTGCTGA+TGG | 0.324554 | 1.1:-69152657 | MS.gene041734:CDS |
| TCATCTGCTTGTCTTCTTCA+AGG | 0.335576 | 1.1:+69150828 | None:intergenic |
| ATCTCACTCGTTTGCTTGAC+AGG | 0.343739 | 1.1:-69154569 | MS.gene041734:CDS |
| GGAGAGAATGGATGGGCATA+TGG | 0.343886 | 1.1:-69154643 | None:intergenic |
| AAATAAGTTTAATGTTATTC+CGG | 0.344511 | 1.1:-69151749 | MS.gene041734:CDS |
| CTGGCCAAGATCCTCCATTA+TGG | 0.347238 | 1.1:+69151437 | None:intergenic |
| ACACGTGGTGGCTACTTCAT+TGG | 0.356280 | 1.1:-69151691 | MS.gene041734:CDS |
| CAACAGGTGCACCTCTAAAA+TGG | 0.356755 | 1.1:+69154334 | None:intergenic |
| GATAAATGTCATTTAGTTGC+TGG | 0.364423 | 1.1:+69151806 | None:intergenic |
| TGGAAGATATGTTGGGAAAC+AGG | 0.366576 | 1.1:-69150936 | MS.gene041734:CDS |
| GAATCTGATAGTTGTCAAAA+AGG | 0.369286 | 1.1:-69152729 | MS.gene041734:CDS |
| ATTGCACGTCTTGCTATTTG+TGG | 0.381527 | 1.1:+69151019 | None:intergenic |
| TACTCGCCTGGAGGAAGATC+TGG | 0.392572 | 1.1:-69154447 | MS.gene041734:CDS |
| AAAAGTGCTTGAATCTCAAT+AGG | 0.404944 | 1.1:+69151961 | None:intergenic |
| AACCCGCAATAGACCATGTT+TGG | 0.407039 | 1.1:+69150903 | None:intergenic |
| GGTAAACTTGGAAGATATGT+TGG | 0.414179 | 1.1:-69150944 | MS.gene041734:CDS |
| TACCAAACATGGTCTATTGC+GGG | 0.414605 | 1.1:-69150905 | MS.gene041734:CDS |
| TCCGGATTCAATTCCAGAAT+GGG | 0.421691 | 1.1:-69151731 | MS.gene041734:CDS |
| GGATCTTATTGAAGCTCGTT+GGG | 0.432163 | 1.1:-69151566 | MS.gene041734:CDS |
| GAATATTACGATGGTAAACT+TGG | 0.442361 | 1.1:-69150956 | MS.gene041734:CDS |
| GAGTAGATAGGTTTAAACTT+GGG | 0.443964 | 1.1:-69152929 | MS.gene041734:CDS |
| TCCATTATGGTAACTCCATC+TGG | 0.444012 | 1.1:+69151450 | None:intergenic |
| AGAGCAGTCAATGGCAATCA+TGG | 0.446518 | 1.1:-69151587 | MS.gene041734:CDS |
| ATGATTGCCATTGACTGCTC+TGG | 0.446728 | 1.1:+69151589 | None:intergenic |
| CATCTGCTTGTCTTCTTCAA+GGG | 0.447224 | 1.1:+69150829 | None:intergenic |
| CTGGAGGACCCCTCACACTT+GGG | 0.450103 | 1.1:-69150860 | MS.gene041734:CDS |
| ATAAAGTCAAACACCCATTC+TGG | 0.451613 | 1.1:+69151718 | None:intergenic |
| GTCTATTGCGGGTTATTTGG+TGG | 0.452343 | 1.1:-69150894 | MS.gene041734:CDS |
| CGTGCTTACACAAAATCTAC+AGG | 0.455584 | 1.1:-69152768 | MS.gene041734:CDS |
| TCCCTTAGTGAATTGTCTGT+TGG | 0.467466 | 1.1:-69154504 | MS.gene041734:CDS |
| AGAGTTGCTCCTGTTGACTC+TGG | 0.469270 | 1.1:-69152813 | MS.gene041734:CDS |
| ACCAGATGGAGTTACCATAA+TGG | 0.469371 | 1.1:-69151451 | MS.gene041734:CDS |
| AGAGTAGATAGGTTTAAACT+TGG | 0.471746 | 1.1:-69152930 | MS.gene041734:CDS |
| GGTGGGAGAAAAGAGTAGAT+AGG | 0.473013 | 1.1:-69152941 | MS.gene041734:CDS |
| CACCAGAATCCAGAGTCAAC+AGG | 0.475876 | 1.1:+69152804 | None:intergenic |
| TCTCGGGTGCAGTGCTCCTA+TGG | 0.481775 | 1.1:-69151075 | MS.gene041734:intron |
| AAGTCCTTCATGATGCCGTT+AGG | 0.485437 | 1.1:-69152881 | MS.gene041734:CDS |
| TTCCGGATTCAATTCCAGAA+TGG | 0.486144 | 1.1:-69151732 | MS.gene041734:CDS |
| AACTATGACAATTACTCGCC+TGG | 0.487484 | 1.1:-69154459 | MS.gene041734:CDS |
| TGGATCTTATTGAAGCTCGT+TGG | 0.487509 | 1.1:-69151567 | MS.gene041734:CDS |
| ACCCATTCTGGAATTGAATC+CGG | 0.488781 | 1.1:+69151730 | None:intergenic |
| TTAAAGACACTACATCTTCA+GGG | 0.492030 | 1.1:-69152963 | MS.gene041734:CDS |
| ACAGCTGCTTGCATCAAGAC+AGG | 0.494728 | 1.1:-69151046 | MS.gene041734:CDS |
| ACAGCTGCAATTGTGCCAAC+AGG | 0.495160 | 1.1:+69154318 | None:intergenic |
| TCCCAGGCATCGGCAACCAT+TGG | 0.497056 | 1.1:+69154378 | None:intergenic |
| CCATCAGCACAAAGCAGAGT+TGG | 0.497910 | 1.1:+69152657 | None:intergenic |
| GAGAGAATGGATGGGCATAT+GGG | 0.498231 | 1.1:-69154642 | None:intergenic |
| GCTGGAGGACCCCTCACACT+TGG | 0.498361 | 1.1:-69150861 | MS.gene041734:CDS |
| AGTAGATAGGTTTAAACTTG+GGG | 0.499014 | 1.1:-69152928 | MS.gene041734:CDS |
| TTGACTTTATGCTTGTCAGA+GGG | 0.502470 | 1.1:-69152693 | MS.gene041734:CDS |
| TCCAATGGTTGCCGATGCCT+GGG | 0.503195 | 1.1:-69154379 | MS.gene041734:CDS |
| GTAAACTTGGAAGATATGTT+GGG | 0.505556 | 1.1:-69150943 | MS.gene041734:CDS |
| CTCGTTTGCTTGACAGGCCG+AGG | 0.505998 | 1.1:-69154563 | MS.gene041734:CDS |
| GGAGAATTGGAGAGAATGGA+TGG | 0.508246 | 1.1:-69154651 | None:intergenic |
| GGGGTCCTCCAGCATCATCT+TGG | 0.509985 | 1.1:+69150871 | None:intergenic |
| TCAGTGTTCGATGGCTGAGA+TGG | 0.510749 | 1.1:-69154601 | MS.gene041734:CDS |
| TCTGAGAGATTCCCAGGCAT+CGG | 0.511999 | 1.1:+69154368 | None:intergenic |
| GGAAGTTCTAAATTACGATC+AGG | 0.512441 | 1.1:-69154280 | MS.gene041734:intron |
| AAATGTCAGTCCGGCTCGAA+TGG | 0.512449 | 1.1:-69151668 | MS.gene041734:CDS |
| GTTACCATAATGGAGGATCT+TGG | 0.514487 | 1.1:-69151441 | MS.gene041734:CDS |
| ATCCTTCAGTAAACGACTCT+CGG | 0.516742 | 1.1:+69150988 | None:intergenic |
| CTCGTTTGAGCCGCATCCAA+TGG | 0.519347 | 1.1:-69154394 | MS.gene041734:CDS |
| TGAAGGACTTTGAAACTAGC+TGG | 0.526537 | 1.1:+69152894 | None:intergenic |
| CATAATGGAGGATCTTGGCC+AGG | 0.526915 | 1.1:-69151436 | MS.gene041734:intron |
| TTAAAACCAGATCTTCCTCC+AGG | 0.527021 | 1.1:+69154441 | None:intergenic |
| AGCAGTATCTTGCTTGAGCA+TGG | 0.533846 | 1.1:+69151912 | None:intergenic |
| TGAAGCTCGTTGGGATGAGT+TGG | 0.534616 | 1.1:-69151557 | MS.gene041734:CDS |
| GAGTTGCGAGCAGATGAAGC+AGG | 0.538724 | 1.1:+69154414 | None:intergenic |
| TTTGGTGGCCAAGATGATGC+TGG | 0.539521 | 1.1:-69150879 | MS.gene041734:CDS |
| CTTCATTGGAAATGTCAGTC+CGG | 0.543913 | 1.1:-69151677 | MS.gene041734:CDS |
| TGTCTCTCTATGTTTAGCCT+CGG | 0.549766 | 1.1:+69154546 | None:intergenic |
| AACCAACAGACAATTCACTA+AGG | 0.552273 | 1.1:+69154502 | None:intergenic |
| GCAAGATACTGCTGACGGAA+AGG | 0.557282 | 1.1:-69151902 | MS.gene041734:CDS |
| GCATCGGCAACCATTGGATG+CGG | 0.557385 | 1.1:+69154384 | None:intergenic |
| CTGTTGACTCTGGATTCTGG+TGG | 0.560824 | 1.1:-69152803 | MS.gene041734:CDS |
| AGCAACTCCAGAGCAGTCAA+TGG | 0.562784 | 1.1:-69151596 | MS.gene041734:CDS |
| AGTCGGCTCTCAGTGTTCGA+TGG | 0.565802 | 1.1:-69154610 | MS.gene041734:CDS |
| ATACCAAACATGGTCTATTG+CGG | 0.570548 | 1.1:-69150906 | MS.gene041734:CDS |
| TGCCGAGAGTCGTTTACTGA+AGG | 0.571524 | 1.1:-69150990 | MS.gene041734:CDS |
| ATTGACTTTATGCTTGTCAG+AGG | 0.572993 | 1.1:-69152694 | MS.gene041734:CDS |
| GAAATCATCCCCAAGTGTGA+GGG | 0.573270 | 1.1:+69150851 | None:intergenic |
| GTCGTTTACTGAAGGATGGA+TGG | 0.575163 | 1.1:-69150982 | MS.gene041734:CDS |
| GATAGGTTTAAACTTGGGGA+AGG | 0.579136 | 1.1:-69152924 | MS.gene041734:CDS |
| CTGCATGATTGATAGAAGAA+TGG | 0.580250 | 1.1:-69152631 | MS.gene041734:intron |
| GACAGAGATCATTTGATGAG+AGG | 0.581865 | 1.1:-69154527 | MS.gene041734:CDS |
| GACACTACATCTTCAGGGGT+GGG | 0.583162 | 1.1:-69152958 | MS.gene041734:CDS |
| GACTTTATGCCAACACGTGG+TGG | 0.583242 | 1.1:-69151703 | MS.gene041734:CDS |
| GAGAGTCGTTTACTGAAGGA+TGG | 0.585747 | 1.1:-69150986 | MS.gene041734:CDS |
| CATATGGGAATTAGGAAAGT+CGG | 0.586182 | 1.1:-69154627 | MS.gene041734:CDS |
| AGTTGCGAGCAGATGAAGCA+GGG | 0.592201 | 1.1:+69154415 | None:intergenic |
| ACTCGTGACTTTCTATTGCA+GGG | 0.593543 | 1.1:+69151506 | None:intergenic |
| GCTCGTTGGGATGAGTTGGT+TGG | 0.593613 | 1.1:-69151553 | MS.gene041734:CDS |
| ACCAACAGACAATTCACTAA+GGG | 0.600417 | 1.1:+69154503 | None:intergenic |
| TGGAGGACCCCTCACACTTG+GGG | 0.604221 | 1.1:-69150859 | MS.gene041734:CDS |
| CATCGAAAATCCATTCGAGC+CGG | 0.607036 | 1.1:+69151658 | None:intergenic |
| GGAAATCATCCCCAAGTGTG+AGG | 0.608698 | 1.1:+69150850 | None:intergenic |
| TGACTTTATGCTTGTCAGAG+GGG | 0.613950 | 1.1:-69152692 | MS.gene041734:CDS |
| GAGAATTGGAGAGAATGGAT+GGG | 0.614047 | 1.1:-69154650 | None:intergenic |
| ATGAAGTAGCCACCACGTGT+TGG | 0.617112 | 1.1:+69151694 | None:intergenic |
| AGACACTACATCTTCAGGGG+TGG | 0.617643 | 1.1:-69152959 | MS.gene041734:CDS |
| CAGCTGCTTGCATCAAGACA+GGG | 0.626845 | 1.1:-69151045 | MS.gene041734:CDS |
| AGGCAAGAAAATACCAAACA+TGG | 0.630162 | 1.1:-69150916 | MS.gene041734:CDS |
| CTCAAGCAAGATACTGCTGA+CGG | 0.630483 | 1.1:-69151907 | MS.gene041734:CDS |
| GTGCTTACACAAAATCTACA+GGG | 0.638309 | 1.1:-69152767 | MS.gene041734:CDS |
| TAAAGACACTACATCTTCAG+GGG | 0.641893 | 1.1:-69152962 | MS.gene041734:CDS |
| AAATCATCCCCAAGTGTGAG+GGG | 0.644060 | 1.1:+69150852 | None:intergenic |
| AAGCAGCTGTTACAAGCCAT+AGG | 0.647567 | 1.1:+69151059 | None:intergenic |
| AGATGGAGTTACCATAATGG+AGG | 0.663691 | 1.1:-69151448 | MS.gene041734:CDS |
| AGCTGTTGATCATCAAGCAG+AGG | 0.665755 | 1.1:-69154301 | MS.gene041734:CDS |
| GGATGGCCTGAATATTACGA+TGG | 0.679721 | 1.1:-69150965 | MS.gene041734:CDS |
| TTTGACTTTATGCCAACACG+TGG | 0.685176 | 1.1:-69151706 | MS.gene041734:CDS |
| GTTGCGAGCAGATGAAGCAG+GGG | 0.696052 | 1.1:+69154416 | None:intergenic |
| CTGCAATAGAAAGTCACGAG+TGG | 0.705027 | 1.1:-69151504 | MS.gene041734:CDS |
| TGCTTACACAAAATCTACAG+GGG | 0.706001 | 1.1:-69152766 | MS.gene041734:CDS |
| CATTTATCGGTACAAGACTG+AGG | 0.710749 | 1.1:-69151791 | MS.gene041734:CDS |
| TATGACAATTACTCGCCTGG+AGG | 0.730881 | 1.1:-69154456 | MS.gene041734:CDS |
| GGTGGCCAAGATGATGCTGG+AGG | 0.759245 | 1.1:-69150876 | MS.gene041734:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATTTGTTTAATCAAA+AGG | - | chr1.1:69151470-69151489 | MS.gene041734:CDS | 10.0% |
| !! | AAATAAGTTTAATGTTATTC+CGG | - | chr1.1:69153677-69153696 | MS.gene041734:intron | 15.0% |
| !! | AACTTTAATATAGTTTATTG+TGG | - | chr1.1:69154093-69154112 | MS.gene041734:intron | 15.0% |
| !! | ACTTTAATATAGTTTATTGT+GGG | - | chr1.1:69154094-69154113 | MS.gene041734:intron | 15.0% |
| !! | ATAATCAGTTTAAAAATTTC+AGG | - | chr1.1:69151399-69151418 | MS.gene041734:intron | 15.0% |
| !! | TAAAATTCAATATTCTGATT+TGG | - | chr1.1:69151188-69151207 | MS.gene041734:intron | 15.0% |
| !!! | AAGAAATTTTTTACTATTTC+CGG | + | chr1.1:69152442-69152461 | None:intergenic | 15.0% |
| !!! | ATGATAAATTTTTCTCTTTT+AGG | - | chr1.1:69152363-69152382 | MS.gene041734:intron | 15.0% |
| !! | AAAATATTTAGCTATCATTC+TGG | + | chr1.1:69151619-69151638 | None:intergenic | 20.0% |
| !! | AAATATTTAGCTATCATTCT+GGG | + | chr1.1:69151618-69151637 | None:intergenic | 20.0% |
| !! | ACAAATAAATAGATGAGATT+TGG | + | chr1.1:69151461-69151480 | None:intergenic | 20.0% |
| !! | ATGAATCATTATAACAGTTA+TGG | + | chr1.1:69152185-69152204 | None:intergenic | 20.0% |
| !! | TATTCAAAGTTCATTTAACT+TGG | - | chr1.1:69154040-69154059 | MS.gene041734:intron | 20.0% |
| !!! | ATAATTTTACTCCATATACT+TGG | - | chr1.1:69151213-69151232 | MS.gene041734:intron | 20.0% |
| !!! | ATTATTTTTACCTATCAATC+TGG | + | chr1.1:69151792-69151811 | None:intergenic | 20.0% |
| !!! | ATTCAAAGTTCATTTAACTT+GGG | - | chr1.1:69154041-69154060 | MS.gene041734:intron | 20.0% |
| !!! | ATTTTCCAATTTATTGTTCA+AGG | - | chr1.1:69152922-69152941 | MS.gene041734:CDS | 20.0% |
| !!! | GTTTTAATCTCTTTAATATG+TGG | - | chr1.1:69153339-69153358 | MS.gene041734:intron | 20.0% |
| ! | AAATCAGATTATCCATAGAA+AGG | + | chr1.1:69154233-69154252 | None:intergenic | 25.0% |
| ! | AATATTTAGCTATCATTCTG+GGG | + | chr1.1:69151617-69151636 | None:intergenic | 25.0% |
| ! | ACAAAATGAAAAGTTAGAGA+AGG | + | chr1.1:69154324-69154343 | None:intergenic | 25.0% |
| ! | ACATTATCTAGTTATTTGGA+TGG | - | chr1.1:69152869-69152888 | MS.gene041734:CDS | 25.0% |
| ! | AGCAACTAAATGACATTTAT+CGG | - | chr1.1:69153622-69153641 | MS.gene041734:intron | 25.0% |
| ! | ATAACTCATATCCAAGTATA+TGG | + | chr1.1:69151227-69151246 | None:intergenic | 25.0% |
| ! | ATGCTATAAGTTGTTCTTAT+AGG | - | chr1.1:69153106-69153125 | MS.gene041734:intron | 25.0% |
| ! | CATAACCTTGAACAATAAAT+TGG | + | chr1.1:69152930-69152949 | None:intergenic | 25.0% |
| ! | CATTAGATGAATTTGACATA+TGG | + | chr1.1:69153267-69153286 | None:intergenic | 25.0% |
| ! | CCTAAAAAGAACAACATTAA+TGG | + | chr1.1:69151515-69151534 | None:intergenic | 25.0% |
| ! | CTGTGTAAAGGTAAAAAAAT+TGG | + | chr1.1:69152311-69152330 | None:intergenic | 25.0% |
| ! | GAAAAGATTTGCAACATATT+TGG | - | chr1.1:69154282-69154301 | MS.gene041734:CDS | 25.0% |
| ! | GTAAGTATTATCAATCTGTT+TGG | + | chr1.1:69154155-69154174 | None:intergenic | 25.0% |
| ! | GTTTGGATAAACAAATTGTT+TGG | - | chr1.1:69153008-69153027 | MS.gene041734:CDS | 25.0% |
| ! | TATCAATCCATAAGAATGAA+GGG | + | chr1.1:69151902-69151921 | None:intergenic | 25.0% |
| ! | TCCAAATAACTAGATAATGT+TGG | + | chr1.1:69152869-69152888 | None:intergenic | 25.0% |
| ! | TCTTACTCTTATTCAACTAT+GGG | - | chr1.1:69152982-69153001 | MS.gene041734:CDS | 25.0% |
| ! | TGATTAAAAGATCATCTTCT+TGG | - | chr1.1:69154627-69154646 | MS.gene041734:CDS | 25.0% |
| ! | TGCAATATCACATATATCAA+AGG | - | chr1.1:69151301-69151320 | MS.gene041734:intron | 25.0% |
| ! | TTCTTACTCTTATTCAACTA+TGG | - | chr1.1:69152981-69153000 | MS.gene041734:CDS | 25.0% |
| ! | TTTGATATATGTGATATTGC+AGG | + | chr1.1:69151302-69151321 | None:intergenic | 25.0% |
| !! | AACAATTTGTTTATCCAAAC+AGG | + | chr1.1:69153008-69153027 | None:intergenic | 25.0% |
| !! | AGGAAAAGCATATAATTTAC+TGG | - | chr1.1:69151532-69151551 | MS.gene041734:CDS | 25.0% |
| !! | CCATTAATGTTGTTCTTTTT+AGG | - | chr1.1:69151512-69151531 | MS.gene041734:CDS | 25.0% |
| !!! | AAGAAAGAGATCATTTTTCT+TGG | - | chr1.1:69151829-69151848 | MS.gene041734:CDS | 25.0% |
| !!! | ACTAAATACAGAGTCATTTT+TGG | - | chr1.1:69154124-69154143 | MS.gene041734:intron | 25.0% |
| !!! | TTCAAAGTTCATTTAACTTG+GGG | - | chr1.1:69154042-69154061 | MS.gene041734:intron | 25.0% |
| !!! | TTCATTTTGTTTAATGCTCT+CGG | - | chr1.1:69154334-69154353 | MS.gene041734:CDS | 25.0% |
| AAAAAGTTAAGGCATGAACT+CGG | + | chr1.1:69154196-69154215 | None:intergenic | 30.0% | |
| AGAGTAGATAGGTTTAAACT+TGG | - | chr1.1:69152496-69152515 | MS.gene041734:intron | 30.0% | |
| AGTAGATAGGTTTAAACTTG+GGG | - | chr1.1:69152498-69152517 | MS.gene041734:intron | 30.0% | |
| AGTTTACCATCGTAATATTC+AGG | + | chr1.1:69154470-69154489 | None:intergenic | 30.0% | |
| ATAGAAATGAAGATTGTAGC+TGG | - | chr1.1:69152004-69152023 | MS.gene041734:intron | 30.0% | |
| ATAGAATTGAAGATTGTAGC+TGG | - | chr1.1:69151919-69151938 | MS.gene041734:CDS | 30.0% | |
| ATCAATCCATAAATGTCAAG+AGG | + | chr1.1:69151986-69152005 | None:intergenic | 30.0% | |
| ATCAATCCATAAGAATGAAG+GGG | + | chr1.1:69151901-69151920 | None:intergenic | 30.0% | |
| ATGGTTAAGTGAACAAAAAG+AGG | + | chr1.1:69151496-69151515 | None:intergenic | 30.0% | |
| ATTATCCATAGAAAGGATGA+GGG | + | chr1.1:69154226-69154245 | None:intergenic | 30.0% | |
| CTATCAATCCATAAGAATGA+AGG | + | chr1.1:69151903-69151922 | None:intergenic | 30.0% | |
| CTGATTTATACAGTGGTTAT+TGG | - | chr1.1:69154246-69154265 | MS.gene041734:intron | 30.0% | |
| CTTTCCTTTAACAAACAACT+TGG | - | chr1.1:69151960-69151979 | MS.gene041734:CDS | 30.0% | |
| GAATATTACGATGGTAAACT+TGG | - | chr1.1:69154470-69154489 | MS.gene041734:CDS | 30.0% | |
| GAATCTGATAGTTGTCAAAA+AGG | - | chr1.1:69152697-69152716 | MS.gene041734:CDS | 30.0% | |
| GAGTAGATAGGTTTAAACTT+GGG | - | chr1.1:69152497-69152516 | MS.gene041734:intron | 30.0% | |
| GCCAACATTATCTAGTTATT+TGG | - | chr1.1:69152865-69152884 | MS.gene041734:CDS | 30.0% | |
| GGATAATCTGATTTATACAG+TGG | - | chr1.1:69154239-69154258 | MS.gene041734:intron | 30.0% | |
| GTAAACTTGGAAGATATGTT+GGG | - | chr1.1:69154483-69154502 | MS.gene041734:CDS | 30.0% | |
| GTCAAATTCATCTAATGATG+TGG | - | chr1.1:69153270-69153289 | MS.gene041734:intron | 30.0% | |
| GTTGTTCTTATAGGCTATAT+TGG | - | chr1.1:69153115-69153134 | MS.gene041734:intron | 30.0% | |
| TAACACATAGGTTTCACATT+GGG | + | chr1.1:69151670-69151689 | None:intergenic | 30.0% | |
| TAAGCTTTACGAGATTGTTT+AGG | + | chr1.1:69153206-69153225 | None:intergenic | 30.0% | |
| TAATATGTGGTTTCAATTCG+AGG | - | chr1.1:69153352-69153371 | MS.gene041734:intron | 30.0% | |
| TAGATACTTGAGTAACACAT+AGG | + | chr1.1:69151682-69151701 | None:intergenic | 30.0% | |
| TCAAAGTTAACTTTGACATC+TGG | + | chr1.1:69151436-69151455 | None:intergenic | 30.0% | |
| TGATTGATAGAAGAATGGTA+AGG | - | chr1.1:69152800-69152819 | MS.gene041734:CDS | 30.0% | |
| TTAAAGACACTACATCTTCA+GGG | - | chr1.1:69152463-69152482 | MS.gene041734:intron | 30.0% | |
| TTAAATCCCCTTCATTCTTA+TGG | - | chr1.1:69151892-69151911 | MS.gene041734:CDS | 30.0% | |
| ! | AAACCTGGTGTCAATATAAA+GGG | - | chr1.1:69151739-69151758 | MS.gene041734:CDS | 30.0% |
| ! | AAATCTCTAGTCCATTTTAG+AGG | - | chr1.1:69151081-69151100 | MS.gene041734:intron | 30.0% |
| ! | AGAGATAGATAGCAATTTTC+GGG | + | chr1.1:69151573-69151592 | None:intergenic | 30.0% |
| ! | GAAGATGATCTTTTAATCAC+TGG | + | chr1.1:69154626-69154645 | None:intergenic | 30.0% |
| ! | GAGAGATAGATAGCAATTTT+CGG | + | chr1.1:69151574-69151593 | None:intergenic | 30.0% |
| ! | GATAAATGTCATTTAGTTGC+TGG | + | chr1.1:69153623-69153642 | None:intergenic | 30.0% |
| ! | GATACTCTTATTGCAGATTT+TGG | - | chr1.1:69152574-69152593 | MS.gene041734:intron | 30.0% |
| ! | TAACTCCATCTGGTATTTTT+AGG | + | chr1.1:69153969-69153988 | None:intergenic | 30.0% |
| !! | AAAAGTGCTTGAATCTCAAT+AGG | + | chr1.1:69153468-69153487 | None:intergenic | 30.0% |
| !! | GTTATCTCTAAAATGTCAAG+AGG | + | chr1.1:69152071-69152090 | None:intergenic | 30.0% |
| !! | TCATTTTGTTTAATGCTCTC+GGG | - | chr1.1:69154335-69154354 | MS.gene041734:CDS | 30.0% |
| !!! | AAGAGTATCTGTTTTCCTAA+CGG | + | chr1.1:69152563-69152582 | None:intergenic | 30.0% |
| AACCAACAGACAATTCACTA+AGG | + | chr1.1:69150927-69150946 | None:intergenic | 35.0% | |
| AACTAAGCATGATGAGAGAA+AGG | + | chr1.1:69154021-69154040 | None:intergenic | 35.0% | |
| AATTTGACATATGGCCTGTT+TGG | + | chr1.1:69153258-69153277 | None:intergenic | 35.0% | |
| ACCAACAGACAATTCACTAA+GGG | + | chr1.1:69150926-69150945 | None:intergenic | 35.0% | |
| ACTAAGCATGATGAGAGAAA+GGG | + | chr1.1:69154020-69154039 | None:intergenic | 35.0% | |
| AGGCAAGAAAATACCAAACA+TGG | - | chr1.1:69154510-69154529 | MS.gene041734:CDS | 35.0% | |
| AGGGGGAAAAGAAAAAGTTA+AGG | + | chr1.1:69154207-69154226 | None:intergenic | 35.0% | |
| ATAAAGTCAAACACCCATTC+TGG | + | chr1.1:69153711-69153730 | None:intergenic | 35.0% | |
| ATACCAAACATGGTCTATTG+CGG | - | chr1.1:69154520-69154539 | MS.gene041734:CDS | 35.0% | |
| CATATGGGAATTAGGAAAGT+CGG | - | chr1.1:69150799-69150818 | MS.gene041734:CDS | 35.0% | |
| CTGCATGATTGATAGAAGAA+TGG | - | chr1.1:69152795-69152814 | MS.gene041734:CDS | 35.0% | |
| GATTATCCATAGAAAGGATG+AGG | + | chr1.1:69154227-69154246 | None:intergenic | 35.0% | |
| GGTAAACTTGGAAGATATGT+TGG | - | chr1.1:69154482-69154501 | MS.gene041734:CDS | 35.0% | |
| GTAACACATAGGTTTCACAT+TGG | + | chr1.1:69151671-69151690 | None:intergenic | 35.0% | |
| GTGATCCTAAAAATACCAGA+TGG | - | chr1.1:69153961-69153980 | MS.gene041734:intron | 35.0% | |
| GTGCTTACACAAAATCTACA+GGG | - | chr1.1:69152659-69152678 | MS.gene041734:CDS | 35.0% | |
| GTTAAAGACACTACATCTTC+AGG | - | chr1.1:69152462-69152481 | MS.gene041734:intron | 35.0% | |
| TAAAGACACTACATCTTCAG+GGG | - | chr1.1:69152464-69152483 | MS.gene041734:intron | 35.0% | |
| TAACCCTTTATATTGACACC+AGG | + | chr1.1:69151745-69151764 | None:intergenic | 35.0% | |
| TAGGAAAACAATACGAAACC+TGG | - | chr1.1:69151724-69151743 | MS.gene041734:CDS | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | - | chr1.1:69153241-69153260 | MS.gene041734:intron | 35.0% | |
| TCTACAAGACATACAATCTG+TGG | - | chr1.1:69151335-69151354 | MS.gene041734:intron | 35.0% | |
| TGCTTACACAAAATCTACAG+GGG | - | chr1.1:69152660-69152679 | MS.gene041734:CDS | 35.0% | |
| TTACCTATCAATCTGGTAAC+AGG | + | chr1.1:69151785-69151804 | None:intergenic | 35.0% | |
| TTATCCATAGAAAGGATGAG+GGG | + | chr1.1:69154225-69154244 | None:intergenic | 35.0% | |
| TTGACTTTATGCTTGTCAGA+GGG | - | chr1.1:69152733-69152752 | MS.gene041734:CDS | 35.0% | |
| TTGTAGCTGGATGTTTAATC+AGG | - | chr1.1:69151932-69151951 | MS.gene041734:CDS | 35.0% | |
| ! | ATTGACTTTATGCTTGTCAG+AGG | - | chr1.1:69152732-69152751 | MS.gene041734:CDS | 35.0% |
| ! | CTTTTTGATGAATGGTGAAC+CGG | - | chr1.1:69152420-69152439 | MS.gene041734:intron | 35.0% |
| ! | GAAACCTGGTGTCAATATAA+AGG | - | chr1.1:69151738-69151757 | MS.gene041734:CDS | 35.0% |
| ! | GATTCAAGCACTTTTCTTCA+TGG | - | chr1.1:69153473-69153492 | MS.gene041734:intron | 35.0% |
| ! | GTATTGTTTTCCTAGCAATC+TGG | + | chr1.1:69151718-69151737 | None:intergenic | 35.0% |
| ! | TTATCTCTGCAAGTTTTCAC+TGG | - | chr1.1:69151267-69151286 | MS.gene041734:intron | 35.0% |
| ! | TTTTTACCTTTACACAGTCG+TGG | - | chr1.1:69152314-69152333 | MS.gene041734:intron | 35.0% |
| !! | GCAGGGTAACTAATTTTTAG+CGG | + | chr1.1:69153906-69153925 | None:intergenic | 35.0% |
| !! | GGAAGTTCTAAATTACGATC+AGG | - | chr1.1:69151146-69151165 | MS.gene041734:intron | 35.0% |
| !! | TTCACATGAGAAGCTACTTT+TGG | - | chr1.1:69153589-69153608 | MS.gene041734:intron | 35.0% |
| !!! | AATTGTCTGTTGGTTTTGCA+AGG | - | chr1.1:69150932-69150951 | MS.gene041734:CDS | 35.0% |
| !!! | ATTGTCTGTTGGTTTTGCAA+GGG | - | chr1.1:69150933-69150952 | MS.gene041734:CDS | 35.0% |
| !!! | GATTTTCGATGGTTTGCTTT+AGG | - | chr1.1:69153780-69153799 | MS.gene041734:intron | 35.0% |
| AACTATGACAATTACTCGCC+TGG | - | chr1.1:69150967-69150986 | MS.gene041734:CDS | 40.0% | |
| AATTGGTCCACTGTACTTTG+TGG | + | chr1.1:69152294-69152313 | None:intergenic | 40.0% | |
| ACCAGATGGAGTTACCATAA+TGG | - | chr1.1:69153975-69153994 | MS.gene041734:intron | 40.0% | |
| ACTCGTGACTTTCTATTGCA+GGG | + | chr1.1:69153923-69153942 | None:intergenic | 40.0% | |
| ACTTGGCCTCTTGACATTTA+TGG | - | chr1.1:69151977-69151996 | MS.gene041734:CDS | 40.0% | |
| AGATGGAGTTACCATAATGG+AGG | - | chr1.1:69153978-69153997 | MS.gene041734:intron | 40.0% | |
| ATATCCATAAACACCCTGCA+AGG | + | chr1.1:69153445-69153464 | None:intergenic | 40.0% | |
| ATCCTTCAGTAAACGACTCT+CGG | + | chr1.1:69154441-69154460 | None:intergenic | 40.0% | |
| ATGCCTGTTACCAGATTGAT+AGG | - | chr1.1:69151779-69151798 | MS.gene041734:CDS | 40.0% | |
| ATTGTTTCCTTCTCCTTGCA+GGG | - | chr1.1:69153429-69153448 | MS.gene041734:intron | 40.0% | |
| CATCTGCTTGTCTTCTTCAA+GGG | + | chr1.1:69154600-69154619 | None:intergenic | 40.0% | |
| CATTTATCGGTACAAGACTG+AGG | - | chr1.1:69153635-69153654 | MS.gene041734:intron | 40.0% | |
| CCGAAGTTCAACTCGTATTT+CGG | - | chr1.1:69153377-69153396 | MS.gene041734:intron | 40.0% | |
| CGGTTCACCATTCATCAAAA+AGG | + | chr1.1:69152422-69152441 | None:intergenic | 40.0% | |
| CGTGCTTACACAAAATCTAC+AGG | - | chr1.1:69152658-69152677 | MS.gene041734:CDS | 40.0% | |
| CTTCATTGGAAATGTCAGTC+CGG | - | chr1.1:69153749-69153768 | MS.gene041734:intron | 40.0% | |
| GACAGAGATCATTTGATGAG+AGG | - | chr1.1:69150899-69150918 | MS.gene041734:CDS | 40.0% | |
| GATAGGTTTAAACTTGGGGA+AGG | - | chr1.1:69152502-69152521 | MS.gene041734:intron | 40.0% | |
| GCACAAGTGCTTATCATGTT+TGG | - | chr1.1:69153039-69153058 | MS.gene041734:CDS | 40.0% | |
| GCTTATTTGAGCTTCTCTAC+TGG | + | chr1.1:69153231-69153250 | None:intergenic | 40.0% | |
| GGATCTTATTGAAGCTCGTT+GGG | - | chr1.1:69153860-69153879 | MS.gene041734:intron | 40.0% | |
| TACCAAACATGGTCTATTGC+GGG | - | chr1.1:69154521-69154540 | MS.gene041734:CDS | 40.0% | |
| TACCCTGCAAAGAACAAAAC+AGG | - | chr1.1:69152125-69152144 | MS.gene041734:intron | 40.0% | |
| TATCCATAGAAAGGATGAGG+GGG | + | chr1.1:69154224-69154243 | None:intergenic | 40.0% | |
| TATTCAACTATGGGCCTGTT+TGG | - | chr1.1:69152991-69153010 | MS.gene041734:CDS | 40.0% | |
| TCATCTGCTTGTCTTCTTCA+AGG | + | chr1.1:69154601-69154620 | None:intergenic | 40.0% | |
| TCCATTATGGTAACTCCATC+TGG | + | chr1.1:69153979-69153998 | None:intergenic | 40.0% | |
| TCCCTTAGTGAATTGTCTGT+TGG | - | chr1.1:69150922-69150941 | MS.gene041734:CDS | 40.0% | |
| TCCGGATTCAATTCCAGAAT+GGG | - | chr1.1:69153695-69153714 | MS.gene041734:intron | 40.0% | |
| TCGGATCAAAATCAGAGGTA+TGG | + | chr1.1:69154177-69154196 | None:intergenic | 40.0% | |
| TGAACTCGGATCAAAATCAG+AGG | + | chr1.1:69154182-69154201 | None:intergenic | 40.0% | |
| TGACTTTATGCTTGTCAGAG+GGG | - | chr1.1:69152734-69152753 | MS.gene041734:CDS | 40.0% | |
| TGGAAGATATGTTGGGAAAC+AGG | - | chr1.1:69154490-69154509 | MS.gene041734:CDS | 40.0% | |
| TGGATCTTATTGAAGCTCGT+TGG | - | chr1.1:69153859-69153878 | MS.gene041734:intron | 40.0% | |
| TGTCTCTCTATGTTTAGCCT+CGG | + | chr1.1:69150883-69150902 | None:intergenic | 40.0% | |
| TGTGATATTGCAGGTTCATG+TGG | + | chr1.1:69151293-69151312 | None:intergenic | 40.0% | |
| TTAAAACCAGATCTTCCTCC+AGG | + | chr1.1:69150988-69151007 | None:intergenic | 40.0% | |
| TTCCGGATTCAATTCCAGAA+TGG | - | chr1.1:69153694-69153713 | MS.gene041734:intron | 40.0% | |
| ! | ACTTTGACATCTGGTGTCAA+CGG | + | chr1.1:69151427-69151446 | None:intergenic | 40.0% |
| ! | ATCAAAAAGGCTAGAGCACT+TGG | + | chr1.1:69152409-69152428 | None:intergenic | 40.0% |
| ! | ATGGTCTATTGCGGGTTATT+TGG | - | chr1.1:69154529-69154548 | MS.gene041734:CDS | 40.0% |
| ! | ATTTAGCTATCATTCTGGGG+AGG | + | chr1.1:69151614-69151633 | None:intergenic | 40.0% |
| ! | CCGAAATACGAGTTGAACTT+CGG | + | chr1.1:69153380-69153399 | None:intergenic | 40.0% |
| ! | GAGGCCAAGTTGTTTGTTAA+AGG | + | chr1.1:69151967-69151986 | None:intergenic | 40.0% |
| ! | GTTACCATAATGGAGGATCT+TGG | - | chr1.1:69153985-69154004 | MS.gene041734:intron | 40.0% |
| ! | TCAAAAAGGCTAGAGCACTT+GGG | + | chr1.1:69152408-69152427 | None:intergenic | 40.0% |
| ! | TTTGACTTTATGCCAACACG+TGG | - | chr1.1:69153720-69153739 | MS.gene041734:intron | 40.0% |
| ! | TTTTCCTAACGGCATCATGA+AGG | + | chr1.1:69152552-69152571 | None:intergenic | 40.0% |
| !! | ACCCATTCTGGAATTGAATC+CGG | + | chr1.1:69153699-69153718 | None:intergenic | 40.0% |
| !! | AGATTTTCTGAGAGATTCCC+AGG | + | chr1.1:69151067-69151086 | None:intergenic | 40.0% |
| !! | ATTGCACGTCTTGCTATTTG+TGG | + | chr1.1:69154410-69154429 | None:intergenic | 40.0% |
| !! | GATTTTGGCGAAAGTGCAAT+CGG | - | chr1.1:69152589-69152608 | MS.gene041734:intron | 40.0% |
| !! | GCTCTAGCCTTTTTGATGAA+TGG | - | chr1.1:69152412-69152431 | MS.gene041734:intron | 40.0% |
| !! | TGAAGGACTTTGAAACTAGC+TGG | + | chr1.1:69152535-69152554 | None:intergenic | 40.0% |
| !! | TGCCTGTTTTGTTCTTTGCA+GGG | + | chr1.1:69152130-69152149 | None:intergenic | 40.0% |
| !! | TTGCCTGTTTTGTTCTTTGC+AGG | + | chr1.1:69152131-69152150 | None:intergenic | 40.0% |
| AAATCATCCCCAAGTGTGAG+GGG | + | chr1.1:69154577-69154596 | None:intergenic | 45.0% | |
| AACCCGCAATAGACCATGTT+TGG | + | chr1.1:69154526-69154545 | None:intergenic | 45.0% | |
| AAGCAGCTGTTACAAGCCAT+AGG | + | chr1.1:69154370-69154389 | None:intergenic | 45.0% | |
| AAGTCCTTCATGATGCCGTT+AGG | - | chr1.1:69152545-69152564 | MS.gene041734:intron | 45.0% | |
| AGAGCAGTCAATGGCAATCA+TGG | - | chr1.1:69153839-69153858 | MS.gene041734:intron | 45.0% | |
| AGCAGTATCTTGCTTGAGCA+TGG | + | chr1.1:69153517-69153536 | None:intergenic | 45.0% | |
| AGCTGTTGATCATCAAGCAG+AGG | - | chr1.1:69151125-69151144 | MS.gene041734:intron | 45.0% | |
| ATAAACACCCTGCAAGGAGA+AGG | + | chr1.1:69153439-69153458 | None:intergenic | 45.0% | |
| ATCTCACTCGTTTGCTTGAC+AGG | - | chr1.1:69150857-69150876 | MS.gene041734:CDS | 45.0% | |
| CACTCGTGACTTTCTATTGC+AGG | + | chr1.1:69153924-69153943 | None:intergenic | 45.0% | |
| CATCGAAAATCCATTCGAGC+CGG | + | chr1.1:69153771-69153790 | None:intergenic | 45.0% | |
| CTCAAGCAAGATACTGCTGA+CGG | - | chr1.1:69153519-69153538 | MS.gene041734:intron | 45.0% | |
| CTGCAATAGAAAGTCACGAG+TGG | - | chr1.1:69153922-69153941 | MS.gene041734:intron | 45.0% | |
| CTTTACACAGTCGTGGACAT+CGG | - | chr1.1:69152321-69152340 | MS.gene041734:intron | 45.0% | |
| GAAATCATCCCCAAGTGTGA+GGG | + | chr1.1:69154578-69154597 | None:intergenic | 45.0% | |
| GACATATGGCCTGTTTGGAT+TGG | + | chr1.1:69153253-69153272 | None:intergenic | 45.0% | |
| GAGAGTCGTTTACTGAAGGA+TGG | - | chr1.1:69154440-69154459 | MS.gene041734:CDS | 45.0% | |
| GATGAGAGAAAGGGAAAACC+TGG | + | chr1.1:69154011-69154030 | None:intergenic | 45.0% | |
| GATTGTTTCCTTCTCCTTGC+AGG | - | chr1.1:69153428-69153447 | MS.gene041734:intron | 45.0% | |
| GGATGGCCTGAATATTACGA+TGG | - | chr1.1:69154461-69154480 | MS.gene041734:CDS | 45.0% | |
| GGTGGGAGAAAAGAGTAGAT+AGG | - | chr1.1:69152485-69152504 | MS.gene041734:intron | 45.0% | |
| GTCGTTTACTGAAGGATGGA+TGG | - | chr1.1:69154444-69154463 | MS.gene041734:CDS | 45.0% | |
| TATGACAATTACTCGCCTGG+AGG | - | chr1.1:69150970-69150989 | MS.gene041734:CDS | 45.0% | |
| TGGATGGGCATATGGGAATT+AGG | - | chr1.1:69150791-69150810 | MS.gene041734:CDS | 45.0% | |
| TTTCCCCCTCATCCTTTCTA+TGG | - | chr1.1:69154218-69154237 | MS.gene041734:intron | 45.0% | |
| ! | ATGATTGCCATTGACTGCTC+TGG | + | chr1.1:69153840-69153859 | None:intergenic | 45.0% |
| ! | CAACAGGTGCACCTCTAAAA+TGG | + | chr1.1:69151095-69151114 | None:intergenic | 45.0% |
| ! | GTCTATTGCGGGTTATTTGG+TGG | - | chr1.1:69154532-69154551 | MS.gene041734:CDS | 45.0% |
| ! | TTCTCCTTGCAGGGTGTTTA+TGG | - | chr1.1:69153438-69153457 | MS.gene041734:intron | 45.0% |
| !! | CATTTTAGAGGTGCACCTGT+TGG | - | chr1.1:69151093-69151112 | MS.gene041734:intron | 45.0% |
| ACACGTGGTGGCTACTTCAT+TGG | - | chr1.1:69153735-69153754 | MS.gene041734:intron | 50.0% | |
| ACAGCTGCAATTGTGCCAAC+AGG | + | chr1.1:69151111-69151130 | None:intergenic | 50.0% | |
| ACAGCTGCTTGCATCAAGAC+AGG | - | chr1.1:69154380-69154399 | MS.gene041734:CDS | 50.0% | |
| AGACACTACATCTTCAGGGG+TGG | - | chr1.1:69152467-69152486 | MS.gene041734:intron | 50.0% | |
| AGCAACTCCAGAGCAGTCAA+TGG | - | chr1.1:69153830-69153849 | MS.gene041734:intron | 50.0% | |
| AGTTGCGAGCAGATGAAGCA+GGG | + | chr1.1:69151014-69151033 | None:intergenic | 50.0% | |
| ATGAAGTAGCCACCACGTGT+TGG | + | chr1.1:69153735-69153754 | None:intergenic | 50.0% | |
| CACCAGAATCCAGAGTCAAC+AGG | + | chr1.1:69152625-69152644 | None:intergenic | 50.0% | |
| CACGAGTGGCGAATTGTTAC+TGG | - | chr1.1:69153936-69153955 | MS.gene041734:intron | 50.0% | |
| CAGCTGCTTGCATCAAGACA+GGG | - | chr1.1:69154381-69154400 | MS.gene041734:CDS | 50.0% | |
| CCAACTCTGCTTTGTGCTGA+TGG | - | chr1.1:69152769-69152788 | MS.gene041734:CDS | 50.0% | |
| CCATCAGCACAAAGCAGAGT+TGG | + | chr1.1:69152772-69152791 | None:intergenic | 50.0% | |
| CGATGTCCACGACTGTGTAA+AGG | + | chr1.1:69152323-69152342 | None:intergenic | 50.0% | |
| CTGGCCAAGATCCTCCATTA+TGG | + | chr1.1:69153992-69154011 | None:intergenic | 50.0% | |
| GACACTACATCTTCAGGGGT+GGG | - | chr1.1:69152468-69152487 | MS.gene041734:intron | 50.0% | |
| GACTTTATGCCAACACGTGG+TGG | - | chr1.1:69153723-69153742 | MS.gene041734:intron | 50.0% | |
| GCAAGATACTGCTGACGGAA+AGG | - | chr1.1:69153524-69153543 | MS.gene041734:intron | 50.0% | |
| GGAAATCATCCCCAAGTGTG+AGG | + | chr1.1:69154579-69154598 | None:intergenic | 50.0% | |
| GTGTGCGTTACCAGATTGCT+AGG | - | chr1.1:69151705-69151724 | MS.gene041734:CDS | 50.0% | |
| GTTGCCTCCACAAAGTACAG+TGG | - | chr1.1:69152284-69152303 | MS.gene041734:intron | 50.0% | |
| TCAGTGTTCGATGGCTGAGA+TGG | - | chr1.1:69150825-69150844 | MS.gene041734:CDS | 50.0% | |
| TCTGAGAGATTCCCAGGCAT+CGG | + | chr1.1:69151061-69151080 | None:intergenic | 50.0% | |
| TGAAGCTCGTTGGGATGAGT+TGG | - | chr1.1:69153869-69153888 | MS.gene041734:intron | 50.0% | |
| TGCCGAGAGTCGTTTACTGA+AGG | - | chr1.1:69154436-69154455 | MS.gene041734:CDS | 50.0% | |
| TGGTCCACTGTACTTTGTGG+AGG | + | chr1.1:69152291-69152310 | None:intergenic | 50.0% | |
| ! | AAATGTCAGTCCGGCTCGAA+TGG | - | chr1.1:69153758-69153777 | MS.gene041734:intron | 50.0% |
| ! | CATAATGGAGGATCTTGGCC+AGG | - | chr1.1:69153990-69154009 | MS.gene041734:intron | 50.0% |
| ! | TAGCTATCATTCTGGGGAGG+TGG | + | chr1.1:69151611-69151630 | None:intergenic | 50.0% |
| ! | TTTGGTGGCCAAGATGATGC+TGG | - | chr1.1:69154547-69154566 | MS.gene041734:CDS | 50.0% |
| !! | AGAGTTGCTCCTGTTGACTC+TGG | - | chr1.1:69152613-69152632 | MS.gene041734:intron | 50.0% |
| !! | CGGCTCGAATGGATTTTCGA+TGG | - | chr1.1:69153769-69153788 | MS.gene041734:intron | 50.0% |
| !! | CTCCTGTTGACTCTGGATTC+TGG | - | chr1.1:69152620-69152639 | MS.gene041734:intron | 50.0% |
| !! | CTGTTGACTCTGGATTCTGG+TGG | - | chr1.1:69152623-69152642 | MS.gene041734:intron | 50.0% |
| !!! | CTGTTGGTTTTGCAAGGGCT+GGG | - | chr1.1:69150938-69150957 | MS.gene041734:CDS | 50.0% |
| !!! | TCTGTTGGTTTTGCAAGGGC+TGG | - | chr1.1:69150937-69150956 | MS.gene041734:CDS | 50.0% |
| ATCCAATGGTTGCCGATGCC+TGG | - | chr1.1:69151046-69151065 | MS.gene041734:CDS | 55.0% | |
| CTCGTTTGAGCCGCATCCAA+TGG | - | chr1.1:69151032-69151051 | MS.gene041734:CDS | 55.0% | |
| GAGTTGCGAGCAGATGAAGC+AGG | + | chr1.1:69151015-69151034 | None:intergenic | 55.0% | |
| GTTGCGAGCAGATGAAGCAG+GGG | + | chr1.1:69151013-69151032 | None:intergenic | 55.0% | |
| TACTCGCCTGGAGGAAGATC+TGG | - | chr1.1:69150979-69150998 | MS.gene041734:CDS | 55.0% | |
| TCCAATGGTTGCCGATGCCT+GGG | - | chr1.1:69151047-69151066 | MS.gene041734:CDS | 55.0% | |
| ! | AGTCGGCTCTCAGTGTTCGA+TGG | - | chr1.1:69150816-69150835 | MS.gene041734:CDS | 55.0% |
| ! | GCATCGGCAACCATTGGATG+CGG | + | chr1.1:69151045-69151064 | None:intergenic | 55.0% |
| ! | TGTGAGTTGAGAGCACGTGC+TGG | - | chr1.1:69151856-69151875 | MS.gene041734:CDS | 55.0% |
| !! | GCTCGTTGGGATGAGTTGGT+TGG | - | chr1.1:69153873-69153892 | MS.gene041734:intron | 55.0% |
| CTCGTTTGCTTGACAGGCCG+AGG | - | chr1.1:69150863-69150882 | MS.gene041734:CDS | 60.0% | |
| CTGGAGGACCCCTCACACTT+GGG | - | chr1.1:69154566-69154585 | MS.gene041734:CDS | 60.0% | |
| GGGGTCCTCCAGCATCATCT+TGG | + | chr1.1:69154558-69154577 | None:intergenic | 60.0% | |
| GGTGGCCAAGATGATGCTGG+AGG | - | chr1.1:69154550-69154569 | MS.gene041734:CDS | 60.0% | |
| TCTCGGGTGCAGTGCTCCTA+TGG | - | chr1.1:69154351-69154370 | MS.gene041734:CDS | 60.0% | |
| TGGAGGACCCCTCACACTTG+GGG | - | chr1.1:69154567-69154586 | MS.gene041734:CDS | 60.0% | |
| !! | TCCCAGGCATCGGCAACCAT+TGG | + | chr1.1:69151051-69151070 | None:intergenic | 60.0% |
| GCTGGAGGACCCCTCACACT+TGG | - | chr1.1:69154565-69154584 | MS.gene041734:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 69150790 | 69154658 | 69150790 | ID=MS.gene041734 |
| chr1.1 | mRNA | 69150790 | 69154658 | 69150790 | ID=MS.gene041734.t1;Parent=MS.gene041734 |
| chr1.1 | exon | 69154281 | 69154658 | 69154281 | ID=MS.gene041734.t1.exon1;Parent=MS.gene041734.t1 |
| chr1.1 | CDS | 69154281 | 69154658 | 69154281 | ID=cds.MS.gene041734.t1;Parent=MS.gene041734.t1 |
| chr1.1 | exon | 69152632 | 69153063 | 69152632 | ID=MS.gene041734.t1.exon2;Parent=MS.gene041734.t1 |
| chr1.1 | CDS | 69152632 | 69153063 | 69152632 | ID=cds.MS.gene041734.t1;Parent=MS.gene041734.t1 |
| chr1.1 | exon | 69151437 | 69151998 | 69151437 | ID=MS.gene041734.t1.exon3;Parent=MS.gene041734.t1 |
| chr1.1 | CDS | 69151437 | 69151998 | 69151437 | ID=cds.MS.gene041734.t1;Parent=MS.gene041734.t1 |
| chr1.1 | exon | 69150790 | 69151085 | 69150790 | ID=MS.gene041734.t1.exon4;Parent=MS.gene041734.t1 |
| chr1.1 | CDS | 69150790 | 69151085 | 69150790 | ID=cds.MS.gene041734.t1;Parent=MS.gene041734.t1 |
| Gene Sequence |
| Protein sequence |
