AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene33980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33980.t1 MTR_1g096140 100.000 555 0 0 1 555 1 555 0.0 1157
MS.gene33980.t1 MTR_1g095970 86.126 555 57 2 1 555 19 553 0.0 978
MS.gene33980.t1 MTR_3g117710 73.369 567 132 6 2 554 12 573 0.0 874
MS.gene33980.t1 MTR_4g075540 69.866 448 129 4 47 493 9 451 0.0 656
MS.gene33980.t1 MTR_8g092170 58.952 458 182 2 91 543 165 621 0.0 586
MS.gene33980.t1 MTR_7g111890 59.062 469 186 4 79 543 116 582 0.0 577
MS.gene33980.t1 MTR_1g084610 59.823 453 176 3 92 540 114 564 0.0 575
MS.gene33980.t1 MTR_4g123030 53.714 525 226 6 34 543 118 640 0.0 572
MS.gene33980.t1 MTR_4g123030 59.945 362 137 3 91 446 184 543 7.41e-154 451
MS.gene33980.t1 MTR_3g015100 57.792 154 63 1 293 446 2 153 6.31e-62 201
MS.gene33980.t1 MTR_3g025460 64.286 70 25 0 129 198 91 160 2.69e-19 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33980.t1 AT4G09510 83.692 558 85 4 2 555 3 558 0.0 973
MS.gene33980.t1 AT1G35580 82.852 554 88 4 1 553 1 548 0.0 962
MS.gene33980.t1 AT1G35580 82.852 554 88 4 1 553 1 548 0.0 962
MS.gene33980.t1 AT1G22650 82.936 545 79 5 10 554 4 534 0.0 945
MS.gene33980.t1 AT4G34860 77.660 564 105 6 6 555 15 571 0.0 907
MS.gene33980.t1 AT4G34860 77.660 564 105 6 6 555 15 571 0.0 907
MS.gene33980.t1 AT4G34860 77.660 564 105 6 6 555 15 571 0.0 907
MS.gene33980.t1 AT1G72000 82.329 498 86 2 58 554 3 499 0.0 874
MS.gene33980.t1 AT4G09510 82.391 460 75 4 2 457 3 460 0.0 790
MS.gene33980.t1 AT1G35580 81.562 461 78 4 1 460 1 455 0.0 787
MS.gene33980.t1 AT1G22650 81.473 448 69 5 10 457 4 437 0.0 764
MS.gene33980.t1 AT5G22510 59.477 459 180 2 91 544 134 591 0.0 587
MS.gene33980.t1 AT5G22510 59.477 459 180 2 91 544 134 591 0.0 587
MS.gene33980.t1 AT1G56560 58.114 456 187 2 91 543 134 588 0.0 576
MS.gene33980.t1 AT3G06500 59.041 459 180 3 91 543 182 638 0.0 566
MS.gene33980.t1 AT3G05820 56.987 458 191 3 91 543 150 606 0.0 557
MS.gene33980.t1 AT3G06500 58.376 394 156 3 156 543 48 439 2.54e-166 481
MS.gene33980.t1 AT3G05820 57.341 361 148 3 91 446 150 509 2.43e-147 434

Find 130 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCTTGCAGGGTGTTTA+TGG 0.100926 1.4:-74688663 MS.gene33980:intron
GATACTCTTATTGCAGATTT+TGG 0.135753 1.4:-74689527 MS.gene33980:CDS
CTCCTGTTGACTCTGGATTC+TGG 0.209312 1.4:-74689481 MS.gene33980:CDS
CGGTTCACCATTCATCAAAA+AGG 0.261228 1.4:+74689682 None:intergenic
TGATTAAAAGATCATCTTCT+TGG 0.264825 1.4:-74687474 MS.gene33980:CDS
ATGGTCTATTGCGGGTTATT+TGG 0.279758 1.4:-74687572 MS.gene33980:CDS
AGCAACTAAATGACATTTAT+CGG 0.283643 1.4:-74688479 MS.gene33980:CDS
TGGATGGGCATATGGGAATT+AGG 0.284454 1.4:-74691303 MS.gene33980:CDS
CACTCGTGACTTTCTATTGC+AGG 0.287232 1.4:+74688180 None:intergenic
CACGAGTGGCGAATTGTTAC+TGG 0.296374 1.4:-74688165 MS.gene33980:CDS
GTTAAAGACACTACATCTTC+AGG 0.309497 1.4:-74689639 MS.gene33980:CDS
TTCACATGAGAAGCTACTTT+TGG 0.315196 1.4:-74688512 MS.gene33980:CDS
ATCCAATGGTTGCCGATGCC+TGG 0.318785 1.4:-74691048 MS.gene33980:CDS
AGTTTACCATCGTAATATTC+AGG 0.320203 1.4:+74687634 None:intergenic
CCAACTCTGCTTTGTGCTGA+TGG 0.324554 1.4:-74689332 MS.gene33980:CDS
TCATCTGCTTGTCTTCTTCA+AGG 0.335576 1.4:+74687503 None:intergenic
ATCTCACTCGTTTGCTTGAC+AGG 0.343739 1.4:-74691237 MS.gene33980:CDS
AAATAAGTTTAATGTTATTC+CGG 0.344511 1.4:-74688424 MS.gene33980:CDS
TGAGAGAATGGATGGGCATA+TGG 0.344591 1.4:-74691311 None:intergenic
CTGGCCAAGATCCTCCATTA+TGG 0.347238 1.4:+74688112 None:intergenic
ACACGTGGTGGCTACTTCAT+TGG 0.356280 1.4:-74688366 MS.gene33980:CDS
CAACAGGTGCACCTCTAAAA+TGG 0.356755 1.4:+74691002 None:intergenic
GATAAATGTCATTTAGTTGC+TGG 0.364423 1.4:+74688481 None:intergenic
TGGAAGATATGTTGGGAAAC+AGG 0.366576 1.4:-74687611 MS.gene33980:CDS
GAATCTGATAGTTGTCAAAA+AGG 0.369286 1.4:-74689404 MS.gene33980:CDS
ATTGCACGTCTTGCTATTTG+TGG 0.381527 1.4:+74687694 None:intergenic
TACTCGCCTGGAGGAAGATC+TGG 0.392572 1.4:-74691115 MS.gene33980:CDS
AAAAGTGCTTGAATCTCAAT+AGG 0.404944 1.4:+74688636 None:intergenic
AACCCGCAATAGACCATGTT+TGG 0.407039 1.4:+74687578 None:intergenic
GGTAAACTTGGAAGATATGT+TGG 0.414179 1.4:-74687619 MS.gene33980:CDS
TACCAAACATGGTCTATTGC+GGG 0.414605 1.4:-74687580 MS.gene33980:CDS
TCCGGATTCAATTCCAGAAT+GGG 0.421691 1.4:-74688406 MS.gene33980:CDS
GGATCTTATTGAAGCTCGTT+GGG 0.432163 1.4:-74688241 MS.gene33980:CDS
GAATATTACGATGGTAAACT+TGG 0.442361 1.4:-74687631 MS.gene33980:CDS
GAGTAGATAGGTTTAAACTT+GGG 0.443964 1.4:-74689604 MS.gene33980:CDS
TCCATTATGGTAACTCCATC+TGG 0.444012 1.4:+74688125 None:intergenic
AGAGCAGTCAATGGCAATCA+TGG 0.446518 1.4:-74688262 MS.gene33980:CDS
ATGATTGCCATTGACTGCTC+TGG 0.446728 1.4:+74688264 None:intergenic
CATCTGCTTGTCTTCTTCAA+GGG 0.447224 1.4:+74687504 None:intergenic
CTGGAGGACCCCTCACACTT+GGG 0.450103 1.4:-74687535 MS.gene33980:CDS
ATAAAGTCAAACACCCATTC+TGG 0.451613 1.4:+74688393 None:intergenic
GTCTATTGCGGGTTATTTGG+TGG 0.452343 1.4:-74687569 MS.gene33980:CDS
CGTGCTTACACAAAATCTAC+AGG 0.455584 1.4:-74689443 MS.gene33980:CDS
TCCCTTAGTGAATTGTCTGT+TGG 0.467466 1.4:-74691172 MS.gene33980:CDS
AGAGTTGCTCCTGTTGACTC+TGG 0.469270 1.4:-74689488 MS.gene33980:CDS
ACCAGATGGAGTTACCATAA+TGG 0.469371 1.4:-74688126 MS.gene33980:CDS
AGAGTAGATAGGTTTAAACT+TGG 0.471746 1.4:-74689605 MS.gene33980:CDS
GGTGGGAGAAAAGAGTAGAT+AGG 0.473013 1.4:-74689616 MS.gene33980:CDS
CACCAGAATCCAGAGTCAAC+AGG 0.475876 1.4:+74689479 None:intergenic
TCTCGGGTGCAGTGCTCCTA+TGG 0.481775 1.4:-74687750 MS.gene33980:intron
AAGTCCTTCATGATGCCGTT+AGG 0.485437 1.4:-74689556 MS.gene33980:CDS
TTCCGGATTCAATTCCAGAA+TGG 0.486144 1.4:-74688407 MS.gene33980:CDS
AACTATGACAATTACTCGCC+TGG 0.487484 1.4:-74691127 MS.gene33980:CDS
TGGATCTTATTGAAGCTCGT+TGG 0.487509 1.4:-74688242 MS.gene33980:CDS
ACCCATTCTGGAATTGAATC+CGG 0.488781 1.4:+74688405 None:intergenic
TTAAAGACACTACATCTTCA+GGG 0.492030 1.4:-74689638 MS.gene33980:CDS
ACAGCTGCTTGCATCAAGAC+AGG 0.494728 1.4:-74687721 MS.gene33980:CDS
ACAGCTGCAATTGTGCCAAC+AGG 0.495160 1.4:+74690986 None:intergenic
TCCCAGGCATCGGCAACCAT+TGG 0.497056 1.4:+74691046 None:intergenic
CCATCAGCACAAAGCAGAGT+TGG 0.497910 1.4:+74689332 None:intergenic
GCTGGAGGACCCCTCACACT+TGG 0.498361 1.4:-74687536 MS.gene33980:CDS
GAGAGAATGGATGGGCATAT+GGG 0.498937 1.4:-74691310 None:intergenic
AGTAGATAGGTTTAAACTTG+GGG 0.499014 1.4:-74689603 MS.gene33980:CDS
TTGACTTTATGCTTGTCAGA+GGG 0.502470 1.4:-74689368 MS.gene33980:CDS
TCCAATGGTTGCCGATGCCT+GGG 0.503195 1.4:-74691047 MS.gene33980:CDS
GTAAACTTGGAAGATATGTT+GGG 0.505556 1.4:-74687618 MS.gene33980:CDS
CTCGTTTGCTTGACAGGCCG+AGG 0.505998 1.4:-74691231 MS.gene33980:CDS
GGGGTCCTCCAGCATCATCT+TGG 0.509985 1.4:+74687546 None:intergenic
TCAGTGTTCGATGGCTGAGA+TGG 0.510749 1.4:-74691269 MS.gene33980:CDS
TCTGAGAGATTCCCAGGCAT+CGG 0.511999 1.4:+74691036 None:intergenic
GTTACCATAATGGAGGATCT+TGG 0.514487 1.4:-74688116 MS.gene33980:CDS
ATCCTTCAGTAAACGACTCT+CGG 0.516742 1.4:+74687663 None:intergenic
CTCGTTTGAGCCGCATCCAA+TGG 0.519347 1.4:-74691062 MS.gene33980:CDS
GGAAGTTCTAAATTACGATC+AGG 0.521332 1.4:-74690948 MS.gene33980:intron
GGAGAATTTGAGAGAATGGA+TGG 0.524675 1.4:-74691319 None:intergenic
TGAAGGACTTTGAAACTAGC+TGG 0.526537 1.4:+74689569 None:intergenic
CATAATGGAGGATCTTGGCC+AGG 0.526915 1.4:-74688111 MS.gene33980:intron
TTAAAACCAGATCTTCCTCC+AGG 0.527021 1.4:+74691109 None:intergenic
AGCAGTATCTTGCTTGAGCA+TGG 0.533846 1.4:+74688587 None:intergenic
TGAAGCTCGTTGGGATGAGT+TGG 0.534616 1.4:-74688232 MS.gene33980:CDS
GAGTTGCGAGCAGATGAAGC+AGG 0.538724 1.4:+74691082 None:intergenic
TTTGGTGGCCAAGATGATGC+TGG 0.539521 1.4:-74687554 MS.gene33980:CDS
AAATGTCAGTCCAGCTCGAA+TGG 0.541335 1.4:-74688343 MS.gene33980:CDS
TGTCTCTCTATGTTTAGCCT+CGG 0.549766 1.4:+74691214 None:intergenic
CATCGAAAATCCATTCGAGC+TGG 0.551481 1.4:+74688333 None:intergenic
AACCAACAGACAATTCACTA+AGG 0.552273 1.4:+74691170 None:intergenic
GCAAGATACTGCTGACGGAA+AGG 0.557282 1.4:-74688577 MS.gene33980:CDS
GCATCGGCAACCATTGGATG+CGG 0.557385 1.4:+74691052 None:intergenic
CTGTTGACTCTGGATTCTGG+TGG 0.560824 1.4:-74689478 MS.gene33980:CDS
AGCAACTCCAGAGCAGTCAA+TGG 0.562784 1.4:-74688271 MS.gene33980:CDS
AGTCGGCTCTCAGTGTTCGA+TGG 0.565802 1.4:-74691278 MS.gene33980:CDS
ATACCAAACATGGTCTATTG+CGG 0.570548 1.4:-74687581 MS.gene33980:CDS
TGCCGAGAGTCGTTTACTGA+AGG 0.571524 1.4:-74687665 MS.gene33980:CDS
ATTGACTTTATGCTTGTCAG+AGG 0.572993 1.4:-74689369 MS.gene33980:CDS
GAAATCATCCCCAAGTGTGA+GGG 0.573270 1.4:+74687526 None:intergenic
GTCGTTTACTGAAGGATGGA+TGG 0.575163 1.4:-74687657 MS.gene33980:CDS
GATAGGTTTAAACTTGGGGA+AGG 0.579136 1.4:-74689599 MS.gene33980:CDS
CTGCATGATTGATAGAAGAA+TGG 0.580250 1.4:-74689306 MS.gene33980:intron
GACAGAGATCATTTGATGAG+AGG 0.581865 1.4:-74691195 MS.gene33980:CDS
GACACTACATCTTCAGGGGT+GGG 0.583162 1.4:-74689633 MS.gene33980:CDS
GACTTTATGCCAACACGTGG+TGG 0.583242 1.4:-74688378 MS.gene33980:CDS
GAGAGTCGTTTACTGAAGGA+TGG 0.585747 1.4:-74687661 MS.gene33980:CDS
CATATGGGAATTAGGAAAGT+CGG 0.586182 1.4:-74691295 MS.gene33980:CDS
AGTTGCGAGCAGATGAAGCA+GGG 0.592201 1.4:+74691083 None:intergenic
ACTCGTGACTTTCTATTGCA+GGG 0.593543 1.4:+74688181 None:intergenic
GCTCGTTGGGATGAGTTGGT+TGG 0.593613 1.4:-74688228 MS.gene33980:CDS
ACCAACAGACAATTCACTAA+GGG 0.600417 1.4:+74691171 None:intergenic
TGGAGGACCCCTCACACTTG+GGG 0.604221 1.4:-74687534 MS.gene33980:CDS
GGAAATCATCCCCAAGTGTG+AGG 0.608698 1.4:+74687525 None:intergenic
GAGAATTTGAGAGAATGGAT+GGG 0.609978 1.4:-74691318 None:intergenic
TGACTTTATGCTTGTCAGAG+GGG 0.613950 1.4:-74689367 MS.gene33980:CDS
ATGAAGTAGCCACCACGTGT+TGG 0.617112 1.4:+74688369 None:intergenic
AGACACTACATCTTCAGGGG+TGG 0.617643 1.4:-74689634 MS.gene33980:CDS
CAGCTGCTTGCATCAAGACA+GGG 0.626845 1.4:-74687720 MS.gene33980:CDS
AGGCAAGAAAATACCAAACA+TGG 0.630162 1.4:-74687591 MS.gene33980:CDS
CTCAAGCAAGATACTGCTGA+CGG 0.630483 1.4:-74688582 MS.gene33980:CDS
GTGCTTACACAAAATCTACA+GGG 0.638309 1.4:-74689442 MS.gene33980:CDS
TAAAGACACTACATCTTCAG+GGG 0.641893 1.4:-74689637 MS.gene33980:CDS
AAATCATCCCCAAGTGTGAG+GGG 0.644060 1.4:+74687527 None:intergenic
AAGCAGCTGTTACAAGCCAT+AGG 0.647567 1.4:+74687734 None:intergenic
AGCTGTTGATCATCAAGCTG+AGG 0.663273 1.4:-74690969 MS.gene33980:CDS
AGATGGAGTTACCATAATGG+AGG 0.663691 1.4:-74688123 MS.gene33980:CDS
GGATGGCCTGAATATTACGA+TGG 0.679721 1.4:-74687640 MS.gene33980:CDS
TTTGACTTTATGCCAACACG+TGG 0.685176 1.4:-74688381 MS.gene33980:CDS
GTTGCGAGCAGATGAAGCAG+GGG 0.696052 1.4:+74691084 None:intergenic
CTGCAATAGAAAGTCACGAG+TGG 0.705027 1.4:-74688179 MS.gene33980:CDS
TGCTTACACAAAATCTACAG+GGG 0.706001 1.4:-74689441 MS.gene33980:CDS
CATTTATCGGTACAAGACTG+AGG 0.710749 1.4:-74688466 MS.gene33980:CDS
TATGACAATTACTCGCCTGG+AGG 0.730881 1.4:-74691124 MS.gene33980:CDS
GGTGGCCAAGATGATGCTGG+AGG 0.759245 1.4:-74687551 MS.gene33980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTATTTGTTTAATCAAA+AGG - chr1.4:74688145-74688164 MS.gene33980:CDS 10.0%
!! AAATAAGTTTAATGTTATTC+CGG - chr1.4:74690345-74690364 MS.gene33980:intron 15.0%
!! AACTTTAATATAGTTTATTG+TGG - chr1.4:74690761-74690780 MS.gene33980:intron 15.0%
!! ACTTTAATATAGTTTATTGT+GGG - chr1.4:74690762-74690781 MS.gene33980:intron 15.0%
!! ATAATCAGTTTAAAAATTTC+AGG - chr1.4:74688074-74688093 MS.gene33980:intron 15.0%
!!! AAGAAATTTTTTACTATTTC+CGG + chr1.4:74689110-74689129 None:intergenic 15.0%
!!! ATGATAAATTTTTCTCTTTT+AGG - chr1.4:74689031-74689050 MS.gene33980:intron 15.0%
!! AAAAAAATTAGCTATCATTC+TGG + chr1.4:74688294-74688313 None:intergenic 20.0%
!! AAAAAATTAGCTATCATTCT+GGG + chr1.4:74688293-74688312 None:intergenic 20.0%
!! ACAAATAAATAGATGAGATT+TGG + chr1.4:74688136-74688155 None:intergenic 20.0%
!! ATGAATCATTATAACAGTTA+TGG + chr1.4:74688854-74688873 None:intergenic 20.0%
!! TAAAATTCAGTATTCTGATT+TGG - chr1.4:74687863-74687882 MS.gene33980:intron 20.0%
!! TATTCAAAGTTCATTTAACT+TGG - chr1.4:74690708-74690727 MS.gene33980:intron 20.0%
!!! ATAATTTTACTCCATATACT+TGG - chr1.4:74687888-74687907 MS.gene33980:intron 20.0%
!!! ATTATTTTTACCTATCAATC+TGG + chr1.4:74688461-74688480 None:intergenic 20.0%
!!! ATTCAAAGTTCATTTAACTT+GGG - chr1.4:74690709-74690728 MS.gene33980:intron 20.0%
!!! ATTTTCCAATTTATTGTTCA+AGG - chr1.4:74689590-74689609 MS.gene33980:CDS 20.0%
!!! GTTTTAATCTCTTTAATATG+TGG - chr1.4:74690007-74690026 MS.gene33980:intron 20.0%
! AAAAATTAGCTATCATTCTG+GGG + chr1.4:74688292-74688311 None:intergenic 25.0%
! AAATCAGATTATCCATAGAA+AGG + chr1.4:74690901-74690920 None:intergenic 25.0%
! ACAAAATGAAAAGTTAGAGA+AGG + chr1.4:74690992-74691011 None:intergenic 25.0%
! ACATTATCTAGTTATTTGGA+TGG - chr1.4:74689537-74689556 MS.gene33980:CDS 25.0%
! AGCAACTAAATGACATTTAT+CGG - chr1.4:74690290-74690309 MS.gene33980:intron 25.0%
! ATAACTCATATCCAAGTATA+TGG + chr1.4:74687902-74687921 None:intergenic 25.0%
! ATGCTATAAGTTGTTCTTAT+AGG - chr1.4:74689774-74689793 MS.gene33980:intron 25.0%
! ATGGTTAAATGAACAAAAAG+AGG + chr1.4:74688171-74688190 None:intergenic 25.0%
! CATAACCTTGAACAATAAAT+TGG + chr1.4:74689598-74689617 None:intergenic 25.0%
! CATTAGATGAATTTGACATA+TGG + chr1.4:74689935-74689954 None:intergenic 25.0%
! CCTAAAAAGAACAACATTAA+TGG + chr1.4:74688190-74688209 None:intergenic 25.0%
! CTGTGTAAAGGTAAAAAAAT+TGG + chr1.4:74688979-74688998 None:intergenic 25.0%
! GAAAAGATTTGCAACATATT+TGG - chr1.4:74690950-74690969 MS.gene33980:CDS 25.0%
! GTAAGTATTATCAATCTGTT+TGG + chr1.4:74690823-74690842 None:intergenic 25.0%
! GTTTGGATAAACAAATTGTT+TGG - chr1.4:74689676-74689695 MS.gene33980:CDS 25.0%
! TATCAATCCATAAGAATGAA+GGG + chr1.4:74688571-74688590 None:intergenic 25.0%
! TCCAAATAACTAGATAATGT+TGG + chr1.4:74689537-74689556 None:intergenic 25.0%
! TCTTACTCTTATTCAACTAT+GGG - chr1.4:74689650-74689669 MS.gene33980:CDS 25.0%
! TGATTAAAAGATCATCTTCT+TGG - chr1.4:74691295-74691314 MS.gene33980:CDS 25.0%
! TGCAATATCACATATATCAA+AGG - chr1.4:74687976-74687995 MS.gene33980:intron 25.0%
! TTTGATATATGTGATATTGC+AGG + chr1.4:74687977-74687996 None:intergenic 25.0%
!! AACAATTTGTTTATCCAAAC+AGG + chr1.4:74689676-74689695 None:intergenic 25.0%
!! AGGAAAAGCATATAATTTAC+TGG - chr1.4:74688207-74688226 MS.gene33980:CDS 25.0%
!! CCATTAATGTTGTTCTTTTT+AGG - chr1.4:74688187-74688206 MS.gene33980:CDS 25.0%
!!! ACTAAATACAGAGTCATTTT+TGG - chr1.4:74690792-74690811 MS.gene33980:intron 25.0%
!!! TTCAAAGTTCATTTAACTTG+GGG - chr1.4:74690710-74690729 MS.gene33980:intron 25.0%
AAAAAGTTAAGGCATGAACT+CGG + chr1.4:74690864-74690883 None:intergenic 30.0%
AGAGTAGATAGGTTTAAACT+TGG - chr1.4:74689164-74689183 MS.gene33980:intron 30.0%
AGTAGATAGGTTTAAACTTG+GGG - chr1.4:74689166-74689185 MS.gene33980:intron 30.0%
AGTTTACCATCGTAATATTC+AGG + chr1.4:74691138-74691157 None:intergenic 30.0%
ATAGAAATGAAGATTGTAGC+TGG - chr1.4:74688588-74688607 MS.gene33980:CDS 30.0%
ATCAATCCATAAGAATGAAG+GGG + chr1.4:74688570-74688589 None:intergenic 30.0%
ATTATCCATAGAAAGGATGA+GGG + chr1.4:74690894-74690913 None:intergenic 30.0%
CTATCAATCCATAAGAATGA+AGG + chr1.4:74688572-74688591 None:intergenic 30.0%
CTGATTTATACAGTGGTTAT+TGG - chr1.4:74690914-74690933 MS.gene33980:intron 30.0%
CTTTCCTTTAACAAACAACT+TGG - chr1.4:74688629-74688648 MS.gene33980:CDS 30.0%
GAATATTACGATGGTAAACT+TGG - chr1.4:74691138-74691157 MS.gene33980:CDS 30.0%
GAATCTGATAGTTGTCAAAA+AGG - chr1.4:74689365-74689384 MS.gene33980:CDS 30.0%
GAGTAGATAGGTTTAAACTT+GGG - chr1.4:74689165-74689184 MS.gene33980:intron 30.0%
GCCAACATTATCTAGTTATT+TGG - chr1.4:74689533-74689552 MS.gene33980:CDS 30.0%
GGATAATCTGATTTATACAG+TGG - chr1.4:74690907-74690926 MS.gene33980:intron 30.0%
GTAAACTTGGAAGATATGTT+GGG - chr1.4:74691151-74691170 MS.gene33980:CDS 30.0%
GTCAAATTCATCTAATGATG+TGG - chr1.4:74689938-74689957 MS.gene33980:intron 30.0%
GTCTTACTCTTATTCAACTA+TGG - chr1.4:74689649-74689668 MS.gene33980:CDS 30.0%
GTTGTTCTTATAGGCTATAT+TGG - chr1.4:74689783-74689802 MS.gene33980:intron 30.0%
TAACACATAGGTTTCACATT+GGG + chr1.4:74688339-74688358 None:intergenic 30.0%
TAAGCTTTACGAGATTGTTT+AGG + chr1.4:74689874-74689893 None:intergenic 30.0%
TAATATGTGGTTTCAATTCG+AGG - chr1.4:74690020-74690039 MS.gene33980:intron 30.0%
TAGATACTTGAGTAACACAT+AGG + chr1.4:74688351-74688370 None:intergenic 30.0%
TCAAAGTTAACTTTGACATC+TGG + chr1.4:74688111-74688130 None:intergenic 30.0%
TGATTGATAGAAGAATGGTA+AGG - chr1.4:74689468-74689487 MS.gene33980:CDS 30.0%
TTAAAGACACTACATCTTCA+GGG - chr1.4:74689131-74689150 MS.gene33980:intron 30.0%
TTAAATCCCCTTCATTCTTA+TGG - chr1.4:74688561-74688580 MS.gene33980:CDS 30.0%
! AAACCTGGTGTCAATATAAA+GGG - chr1.4:74688408-74688427 MS.gene33980:CDS 30.0%
! AAATCTCTAGTCCATTTTAG+AGG - chr1.4:74687756-74687775 MS.gene33980:intron 30.0%
! AGAGATAGATAGCAATTTTC+GGG + chr1.4:74688248-74688267 None:intergenic 30.0%
! GAAGATGATCTTTTAATCAC+TGG + chr1.4:74691294-74691313 None:intergenic 30.0%
! GAGAGATAGATAGCAATTTT+CGG + chr1.4:74688249-74688268 None:intergenic 30.0%
! GATAAATGTCATTTAGTTGC+TGG + chr1.4:74690291-74690310 None:intergenic 30.0%
! GATACTCTTATTGCAGATTT+TGG - chr1.4:74689242-74689261 MS.gene33980:intron 30.0%
! TAACTCCATCTGGTATTTTT+AGG + chr1.4:74690637-74690656 None:intergenic 30.0%
!! AAAAGTGCTTGAATCTCAAT+AGG + chr1.4:74690136-74690155 None:intergenic 30.0%
!! AAGAAAGAGACCATTTTTCT+TGG - chr1.4:74688498-74688517 MS.gene33980:CDS 30.0%
!! GTTATCTCTAAAATGTCAAG+AGG + chr1.4:74688740-74688759 None:intergenic 30.0%
!! TTCATTTTGTTTCATGCTCT+CGG - chr1.4:74691002-74691021 MS.gene33980:CDS 30.0%
!!! AAGAGTATCTGTTTTCCTAA+CGG + chr1.4:74689231-74689250 None:intergenic 30.0%
AACCAACAGACAATTCACTA+AGG + chr1.4:74687602-74687621 None:intergenic 35.0%
AACTAAGCATGATGAGAGAA+AGG + chr1.4:74690689-74690708 None:intergenic 35.0%
AATTTGACATATGGCCTGTT+TGG + chr1.4:74689926-74689945 None:intergenic 35.0%
ACCAACAGACAATTCACTAA+GGG + chr1.4:74687601-74687620 None:intergenic 35.0%
ACTAAGCATGATGAGAGAAA+GGG + chr1.4:74690688-74690707 None:intergenic 35.0%
ACTTGGCTTCTTGACATTTA+TGG - chr1.4:74688646-74688665 MS.gene33980:CDS 35.0%
AGGCAAGAAAATACCAAACA+TGG - chr1.4:74691178-74691197 MS.gene33980:CDS 35.0%
AGGGGGAAAAGAAAAAGTTA+AGG + chr1.4:74690875-74690894 None:intergenic 35.0%
ATAAAGTCAAACACCCATTC+TGG + chr1.4:74690379-74690398 None:intergenic 35.0%
ATACCAAACATGGTCTATTG+CGG - chr1.4:74691188-74691207 MS.gene33980:CDS 35.0%
CATATGGGAATTAGGAAAGT+CGG - chr1.4:74687474-74687493 MS.gene33980:CDS 35.0%
CTCACATGTTCCAAGAAAAA+TGG + chr1.4:74688511-74688530 None:intergenic 35.0%
CTGCATGATTGATAGAAGAA+TGG - chr1.4:74689463-74689482 MS.gene33980:CDS 35.0%
GATTATCCATAGAAAGGATG+AGG + chr1.4:74690895-74690914 None:intergenic 35.0%
GGTAAACTTGGAAGATATGT+TGG - chr1.4:74691150-74691169 MS.gene33980:CDS 35.0%
GTAACACATAGGTTTCACAT+TGG + chr1.4:74688340-74688359 None:intergenic 35.0%
GTGATCCTAAAAATACCAGA+TGG - chr1.4:74690629-74690648 MS.gene33980:intron 35.0%
GTGCTTACACAAAATCTACA+GGG - chr1.4:74689327-74689346 MS.gene33980:CDS 35.0%
GTTAAAGACACTACATCTTC+AGG - chr1.4:74689130-74689149 MS.gene33980:intron 35.0%
TAAAGACACTACATCTTCAG+GGG - chr1.4:74689132-74689151 MS.gene33980:intron 35.0%
TAACCCTTTATATTGACACC+AGG + chr1.4:74688414-74688433 None:intergenic 35.0%
TAGGAAAACAATACGAAACC+TGG - chr1.4:74688393-74688412 MS.gene33980:CDS 35.0%
TCAAATAAGCCAATCCAAAC+AGG - chr1.4:74689909-74689928 MS.gene33980:intron 35.0%
TCTACAAGACATACAATCTG+TGG - chr1.4:74688010-74688029 MS.gene33980:intron 35.0%
TGCTTACACAAAATCTACAG+GGG - chr1.4:74689328-74689347 MS.gene33980:CDS 35.0%
TTACCTATCAATCTGGTAAC+AGG + chr1.4:74688454-74688473 None:intergenic 35.0%
TTATCCATAGAAAGGATGAG+GGG + chr1.4:74690893-74690912 None:intergenic 35.0%
TTGACTTTATGCTTGTCAGA+GGG - chr1.4:74689401-74689420 MS.gene33980:CDS 35.0%
TTGTAGCTGGATGTTTAATC+AGG - chr1.4:74688601-74688620 MS.gene33980:CDS 35.0%
! ATTGACTTTATGCTTGTCAG+AGG - chr1.4:74689400-74689419 MS.gene33980:CDS 35.0%
! CCAAAATACGAGTTGAACTT+CGG + chr1.4:74690048-74690067 None:intergenic 35.0%
! CTTTTTGATGAATGGTGAAC+CGG - chr1.4:74689088-74689107 MS.gene33980:intron 35.0%
! GAAACCTGGTGTCAATATAA+AGG - chr1.4:74688407-74688426 MS.gene33980:CDS 35.0%
! GAAGCCAAGTTGTTTGTTAA+AGG + chr1.4:74688636-74688655 None:intergenic 35.0%
! GATTCAAGCACTTTTCTTCA+TGG - chr1.4:74690141-74690160 MS.gene33980:intron 35.0%
! GTATTGTTTTCCTAGCAATC+TGG + chr1.4:74688387-74688406 None:intergenic 35.0%
! TTATCTCTGCAAGTTTTCAC+TGG - chr1.4:74687942-74687961 MS.gene33980:intron 35.0%
! TTTTTACCTTTACACAGTCG+TGG - chr1.4:74688982-74689001 MS.gene33980:intron 35.0%
!! GCAGGGTAACTAATTTTTAG+CGG + chr1.4:74690574-74690593 None:intergenic 35.0%
!! GGAAGTTCTAAATTACGATC+AGG - chr1.4:74687821-74687840 MS.gene33980:intron 35.0%
!! TCATTTTGTTTCATGCTCTC+GGG - chr1.4:74691003-74691022 MS.gene33980:CDS 35.0%
!! TTCACATGAGAAGCTACTTT+TGG - chr1.4:74690257-74690276 MS.gene33980:intron 35.0%
!!! AATTGTCTGTTGGTTTTGCA+AGG - chr1.4:74687607-74687626 MS.gene33980:CDS 35.0%
!!! ATTGTCTGTTGGTTTTGCAA+GGG - chr1.4:74687608-74687627 MS.gene33980:CDS 35.0%
!!! GATTTTCGATGGTTTGCTTT+AGG - chr1.4:74690448-74690467 MS.gene33980:intron 35.0%
AACTATGACAATTACTCGCC+TGG - chr1.4:74687642-74687661 MS.gene33980:CDS 40.0%
AATTGGTCCACTGTACTTTG+TGG + chr1.4:74688962-74688981 None:intergenic 40.0%
ACCAGATGGAGTTACCATAA+TGG - chr1.4:74690643-74690662 MS.gene33980:intron 40.0%
ACTCGTGACTTTCTATTGCA+GGG + chr1.4:74690591-74690610 None:intergenic 40.0%
AGATGGAGTTACCATAATGG+AGG - chr1.4:74690646-74690665 MS.gene33980:intron 40.0%
ATATCCATAAACACCCTGCA+AGG + chr1.4:74690113-74690132 None:intergenic 40.0%
ATCCTTCAGTAAACGACTCT+CGG + chr1.4:74691109-74691128 None:intergenic 40.0%
ATGCCTGTTACCAGATTGAT+AGG - chr1.4:74688448-74688467 MS.gene33980:CDS 40.0%
ATTGTTTCCTTCTCCTTGCA+GGG - chr1.4:74690097-74690116 MS.gene33980:intron 40.0%
CATCTGCTTGTCTTCTTCAA+GGG + chr1.4:74691268-74691287 None:intergenic 40.0%
CATTTATCGGTACAAGACTG+AGG - chr1.4:74690303-74690322 MS.gene33980:intron 40.0%
CGGTTCACCATTCATCAAAA+AGG + chr1.4:74689090-74689109 None:intergenic 40.0%
CGTGCTTACACAAAATCTAC+AGG - chr1.4:74689326-74689345 MS.gene33980:CDS 40.0%
GACAGAGATCATTTGATGAG+AGG - chr1.4:74687574-74687593 MS.gene33980:CDS 40.0%
GATAGGTTTAAACTTGGGGA+AGG - chr1.4:74689170-74689189 MS.gene33980:intron 40.0%
GCTTATTTGAGCTTCTCTAC+TGG + chr1.4:74689899-74689918 None:intergenic 40.0%
GGATCTTATTGAAGCTCGTT+GGG - chr1.4:74690528-74690547 MS.gene33980:intron 40.0%
TACCAAACATGGTCTATTGC+GGG - chr1.4:74691189-74691208 MS.gene33980:CDS 40.0%
TACCCTGCAAAGAACAAAAC+AGG - chr1.4:74688794-74688813 MS.gene33980:intron 40.0%
TATCCATAGAAAGGATGAGG+GGG + chr1.4:74690892-74690911 None:intergenic 40.0%
TATTCAACTATGGGCCTGTT+TGG - chr1.4:74689659-74689678 MS.gene33980:CDS 40.0%
TCATCTGCTTGTCTTCTTCA+AGG + chr1.4:74691269-74691288 None:intergenic 40.0%
TCCATTATGGTAACTCCATC+TGG + chr1.4:74690647-74690666 None:intergenic 40.0%
TCCCTTAGTGAATTGTCTGT+TGG - chr1.4:74687597-74687616 MS.gene33980:CDS 40.0%
TCCGGATTCAATTCCAGAAT+GGG - chr1.4:74690363-74690382 MS.gene33980:intron 40.0%
TCGGATCAAAATCAGAGGTA+TGG + chr1.4:74690845-74690864 None:intergenic 40.0%
TGAACTCGGATCAAAATCAG+AGG + chr1.4:74690850-74690869 None:intergenic 40.0%
TGACTTTATGCTTGTCAGAG+GGG - chr1.4:74689402-74689421 MS.gene33980:CDS 40.0%
TGGAAGATATGTTGGGAAAC+AGG - chr1.4:74691158-74691177 MS.gene33980:CDS 40.0%
TGGATCTTATTGAAGCTCGT+TGG - chr1.4:74690527-74690546 MS.gene33980:intron 40.0%
TGTCTCTCTATGTTTAGCCT+CGG + chr1.4:74687558-74687577 None:intergenic 40.0%
TGTGATATTGCAGGTTCATG+TGG + chr1.4:74687968-74687987 None:intergenic 40.0%
TTAAAACCAGATCTTCCTCC+AGG + chr1.4:74687663-74687682 None:intergenic 40.0%
TTCCGGATTCAATTCCAGAA+TGG - chr1.4:74690362-74690381 MS.gene33980:intron 40.0%
! AATTAGCTATCATTCTGGGG+AGG + chr1.4:74688289-74688308 None:intergenic 40.0%
! ACTTTGACATCTGGTGTCAA+CGG + chr1.4:74688102-74688121 None:intergenic 40.0%
! ATCAAAAAGGCTAGAGCACT+TGG + chr1.4:74689077-74689096 None:intergenic 40.0%
! ATGGTCTATTGCGGGTTATT+TGG - chr1.4:74691197-74691216 MS.gene33980:CDS 40.0%
! CCGAAGTTCAACTCGTATTT+TGG - chr1.4:74690045-74690064 MS.gene33980:intron 40.0%
! GAGGCCAAGTTGTTTGTTAA+AGG + chr1.4:74688721-74688740 None:intergenic 40.0%
! GTTACCATAATGGAGGATCT+TGG - chr1.4:74690653-74690672 MS.gene33980:intron 40.0%
! GTTTGGAGCTTATAGCACAA+GGG - chr1.4:74689693-74689712 MS.gene33980:CDS 40.0%
! TCAAAAAGGCTAGAGCACTT+GGG + chr1.4:74689076-74689095 None:intergenic 40.0%
! TGTTTGGAGCTTATAGCACA+AGG - chr1.4:74689692-74689711 MS.gene33980:CDS 40.0%
! TTTGACTTTATGCCAACACG+TGG - chr1.4:74690388-74690407 MS.gene33980:intron 40.0%
! TTTTCCTAACGGCATCATGA+AGG + chr1.4:74689220-74689239 None:intergenic 40.0%
!! ACCCATTCTGGAATTGAATC+CGG + chr1.4:74690367-74690386 None:intergenic 40.0%
!! AGATTTTCTGAGAGATTCCC+AGG + chr1.4:74687742-74687761 None:intergenic 40.0%
!! ATTGCACGTCTTGCTATTTG+TGG + chr1.4:74691078-74691097 None:intergenic 40.0%
!! GATTTTGGCGAAAGTGCAAT+CGG - chr1.4:74689257-74689276 MS.gene33980:intron 40.0%
!! GCTCTAGCCTTTTTGATGAA+TGG - chr1.4:74689080-74689099 MS.gene33980:intron 40.0%
!! TGAAGGACTTTGAAACTAGC+TGG + chr1.4:74689203-74689222 None:intergenic 40.0%
!! TGCCTGTTTTGTTCTTTGCA+GGG + chr1.4:74688799-74688818 None:intergenic 40.0%
!! TTGCCTGTTTTGTTCTTTGC+AGG + chr1.4:74688800-74688819 None:intergenic 40.0%
AAATCATCCCCAAGTGTGAG+GGG + chr1.4:74691245-74691264 None:intergenic 45.0%
AAATGTCAGTCCAGCTCGAA+TGG - chr1.4:74690426-74690445 MS.gene33980:intron 45.0%
AACCCGCAATAGACCATGTT+TGG + chr1.4:74691194-74691213 None:intergenic 45.0%
AAGCAGCTGTTACAAGCCAT+AGG + chr1.4:74691038-74691057 None:intergenic 45.0%
AAGTCCTTCATGATGCCGTT+AGG - chr1.4:74689213-74689232 MS.gene33980:intron 45.0%
AGAGCAGTCAATGGCAATCA+TGG - chr1.4:74690507-74690526 MS.gene33980:intron 45.0%
AGCAGTATCTTGCTTGAGCA+TGG + chr1.4:74690185-74690204 None:intergenic 45.0%
AGCTGTTGATCATCAAGCTG+AGG - chr1.4:74687800-74687819 MS.gene33980:intron 45.0%
ATAAACACCCTGCAAGGAGA+AGG + chr1.4:74690107-74690126 None:intergenic 45.0%
ATCTCACTCGTTTGCTTGAC+AGG - chr1.4:74687532-74687551 MS.gene33980:CDS 45.0%
CACTCGTGACTTTCTATTGC+AGG + chr1.4:74690592-74690611 None:intergenic 45.0%
CATCGAAAATCCATTCGAGC+TGG + chr1.4:74690439-74690458 None:intergenic 45.0%
CTCAAGCAAGATACTGCTGA+CGG - chr1.4:74690187-74690206 MS.gene33980:intron 45.0%
CTGCAATAGAAAGTCACGAG+TGG - chr1.4:74690590-74690609 MS.gene33980:intron 45.0%
CTTTACACAGTCGTGGACAT+CGG - chr1.4:74688989-74689008 MS.gene33980:intron 45.0%
GAAATCATCCCCAAGTGTGA+GGG + chr1.4:74691246-74691265 None:intergenic 45.0%
GACATATGGCCTGTTTGGAT+TGG + chr1.4:74689921-74689940 None:intergenic 45.0%
GAGAGTCGTTTACTGAAGGA+TGG - chr1.4:74691108-74691127 MS.gene33980:CDS 45.0%
GATGAGAGAAAGGGAAAACC+TGG + chr1.4:74690679-74690698 None:intergenic 45.0%
GATTGTTTCCTTCTCCTTGC+AGG - chr1.4:74690096-74690115 MS.gene33980:intron 45.0%
GCACAAGGGCTTATCATGTT+TGG - chr1.4:74689707-74689726 MS.gene33980:CDS 45.0%
GGATGGCCTGAATATTACGA+TGG - chr1.4:74691129-74691148 MS.gene33980:CDS 45.0%
GGTGGGAGAAAAGAGTAGAT+AGG - chr1.4:74689153-74689172 MS.gene33980:intron 45.0%
GTCGTTTACTGAAGGATGGA+TGG - chr1.4:74691112-74691131 MS.gene33980:CDS 45.0%
TATGACAATTACTCGCCTGG+AGG - chr1.4:74687645-74687664 MS.gene33980:CDS 45.0%
TGGATGGGCATATGGGAATT+AGG - chr1.4:74687466-74687485 MS.gene33980:CDS 45.0%
TTTCCCCCTCATCCTTTCTA+TGG - chr1.4:74690886-74690905 MS.gene33980:intron 45.0%
! ATGATTGCCATTGACTGCTC+TGG + chr1.4:74690508-74690527 None:intergenic 45.0%
! CAACAGGTGCACCTCTAAAA+TGG + chr1.4:74687770-74687789 None:intergenic 45.0%
! GTCTATTGCGGGTTATTTGG+TGG - chr1.4:74691200-74691219 MS.gene33980:CDS 45.0%
! TTCTCCTTGCAGGGTGTTTA+TGG - chr1.4:74690106-74690125 MS.gene33980:intron 45.0%
!! CAGCTCGAATGGATTTTCGA+TGG - chr1.4:74690437-74690456 MS.gene33980:intron 45.0%
!! CATTTTAGAGGTGCACCTGT+TGG - chr1.4:74687768-74687787 MS.gene33980:intron 45.0%
ACACGTGGTGGCTACTTCAT+TGG - chr1.4:74690403-74690422 MS.gene33980:intron 50.0%
ACAGCTGCAATTGTGCCAAC+AGG + chr1.4:74687786-74687805 None:intergenic 50.0%
ACAGCTGCTTGCATCAAGAC+AGG - chr1.4:74691048-74691067 MS.gene33980:CDS 50.0%
AGACACTACATCTTCAGGGG+TGG - chr1.4:74689135-74689154 MS.gene33980:intron 50.0%
AGCAACTCCAGAGCAGTCAA+TGG - chr1.4:74690498-74690517 MS.gene33980:intron 50.0%
AGTTGCGAGCAGATGAAGCA+GGG + chr1.4:74687689-74687708 None:intergenic 50.0%
ATGAAGTAGCCACCACGTGT+TGG + chr1.4:74690403-74690422 None:intergenic 50.0%
CACCAGAATCCAGAGTCAAC+AGG + chr1.4:74689293-74689312 None:intergenic 50.0%
CACGAGTGGCGAATTGTTAC+TGG - chr1.4:74690604-74690623 MS.gene33980:intron 50.0%
CAGCTGCTTGCATCAAGACA+GGG - chr1.4:74691049-74691068 MS.gene33980:CDS 50.0%
CCAACTCTGCTTTGTGCTGA+TGG - chr1.4:74689437-74689456 MS.gene33980:CDS 50.0%
CCATCAGCACAAAGCAGAGT+TGG + chr1.4:74689440-74689459 None:intergenic 50.0%
CGATGTCCACGACTGTGTAA+AGG + chr1.4:74688991-74689010 None:intergenic 50.0%
CTGGCCAAGATCCTCCATTA+TGG + chr1.4:74690660-74690679 None:intergenic 50.0%
GACACTACATCTTCAGGGGT+GGG - chr1.4:74689136-74689155 MS.gene33980:intron 50.0%
GACTTTATGCCAACACGTGG+TGG - chr1.4:74690391-74690410 MS.gene33980:intron 50.0%
GCAAGATACTGCTGACGGAA+AGG - chr1.4:74690192-74690211 MS.gene33980:intron 50.0%
GGAAATCATCCCCAAGTGTG+AGG + chr1.4:74691247-74691266 None:intergenic 50.0%
GTGTGCGTTACCAGATTGCT+AGG - chr1.4:74688374-74688393 MS.gene33980:CDS 50.0%
GTTGCCTCCACAAAGTACAG+TGG - chr1.4:74688952-74688971 MS.gene33980:intron 50.0%
TCAGTGTTCGATGGCTGAGA+TGG - chr1.4:74687500-74687519 MS.gene33980:CDS 50.0%
TCTGAGAGATTCCCAGGCAT+CGG + chr1.4:74687736-74687755 None:intergenic 50.0%
TGAAGCTCGTTGGGATGAGT+TGG - chr1.4:74690537-74690556 MS.gene33980:intron 50.0%
TGCCGAGAGTCGTTTACTGA+AGG - chr1.4:74691104-74691123 MS.gene33980:CDS 50.0%
TGGTCCACTGTACTTTGTGG+AGG + chr1.4:74688959-74688978 None:intergenic 50.0%
! CATAATGGAGGATCTTGGCC+AGG - chr1.4:74690658-74690677 MS.gene33980:intron 50.0%
! TAGCTATCATTCTGGGGAGG+AGG + chr1.4:74688286-74688305 None:intergenic 50.0%
! TTTGGTGGCCAAGATGATGC+TGG - chr1.4:74691215-74691234 MS.gene33980:CDS 50.0%
!! AGAGTTGCTCCTGTTGACTC+TGG - chr1.4:74689281-74689300 MS.gene33980:intron 50.0%
!! CTCCTGTTGACTCTGGATTC+TGG - chr1.4:74689288-74689307 MS.gene33980:intron 50.0%
!! CTGTTGACTCTGGATTCTGG+TGG - chr1.4:74689291-74689310 MS.gene33980:intron 50.0%
!!! CTGTTGGTTTTGCAAGGGCT+GGG - chr1.4:74687613-74687632 MS.gene33980:CDS 50.0%
!!! TCTGTTGGTTTTGCAAGGGC+TGG - chr1.4:74687612-74687631 MS.gene33980:CDS 50.0%
ATCCAATGGTTGCCGATGCC+TGG - chr1.4:74687721-74687740 MS.gene33980:CDS 55.0%
CTCGTTTGAGCCGCATCCAA+TGG - chr1.4:74687707-74687726 MS.gene33980:CDS 55.0%
GAGTTGCGAGCAGATGAAGC+AGG + chr1.4:74687690-74687709 None:intergenic 55.0%
GTTGCGAGCAGATGAAGCAG+GGG + chr1.4:74687688-74687707 None:intergenic 55.0%
TACTCGCCTGGAGGAAGATC+TGG - chr1.4:74687654-74687673 MS.gene33980:CDS 55.0%
TCCAATGGTTGCCGATGCCT+GGG - chr1.4:74687722-74687741 MS.gene33980:CDS 55.0%
! AGTCGGCTCTCAGTGTTCGA+TGG - chr1.4:74687491-74687510 MS.gene33980:CDS 55.0%
! GCATCGGCAACCATTGGATG+CGG + chr1.4:74687720-74687739 None:intergenic 55.0%
! TGTGAGTTGAGAGCACGTGC+TGG - chr1.4:74688525-74688544 MS.gene33980:CDS 55.0%
!! GCTCGTTGGGATGAGTTGGT+TGG - chr1.4:74690541-74690560 MS.gene33980:intron 55.0%
CTCGTTTGCTTGACAGGCCG+AGG - chr1.4:74687538-74687557 MS.gene33980:CDS 60.0%
CTGGAGGACCCCTCACACTT+GGG - chr1.4:74691234-74691253 MS.gene33980:CDS 60.0%
GGGGTCCTCCAGCATCATCT+TGG + chr1.4:74691226-74691245 None:intergenic 60.0%
GGTGGCCAAGATGATGCTGG+AGG - chr1.4:74691218-74691237 MS.gene33980:CDS 60.0%
TCTCGGGTGCAGTGCTCCTA+TGG - chr1.4:74691019-74691038 MS.gene33980:CDS 60.0%
TGGAGGACCCCTCACACTTG+GGG - chr1.4:74691235-74691254 MS.gene33980:CDS 60.0%
!! TCCCAGGCATCGGCAACCAT+TGG + chr1.4:74687726-74687745 None:intergenic 60.0%
GCTGGAGGACCCCTCACACT+TGG - chr1.4:74691233-74691252 MS.gene33980:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 74687465 74691326 74687465 ID=MS.gene33980
chr1.4 mRNA 74687465 74691326 74687465 ID=MS.gene33980.t1;Parent=MS.gene33980
chr1.4 exon 74690949 74691326 74690949 ID=MS.gene33980.t1.exon1;Parent=MS.gene33980.t1
chr1.4 CDS 74690949 74691326 74690949 ID=cds.MS.gene33980.t1;Parent=MS.gene33980.t1
chr1.4 exon 74689307 74689738 74689307 ID=MS.gene33980.t1.exon2;Parent=MS.gene33980.t1
chr1.4 CDS 74689307 74689738 74689307 ID=cds.MS.gene33980.t1;Parent=MS.gene33980.t1
chr1.4 exon 74688112 74688673 74688112 ID=MS.gene33980.t1.exon3;Parent=MS.gene33980.t1
chr1.4 CDS 74688112 74688673 74688112 ID=cds.MS.gene33980.t1;Parent=MS.gene33980.t1
chr1.4 exon 74687465 74687760 74687465 ID=MS.gene33980.t1.exon4;Parent=MS.gene33980.t1
chr1.4 CDS 74687465 74687760 74687465 ID=cds.MS.gene33980.t1;Parent=MS.gene33980.t1
Gene Sequence

>MS.gene33980

ATGGATGGGCATATGGGAATTAGGAAAGTCGGCTCTCAGTGTTCGATGGCTGAGATGGATGATTTCGATCTCACTCGTTTGCTTGACAGGCCGAGGCTAAACATAGAGAGACAGAGATCATTTGATGAGAGGTCCCTTAGTGAATTGTCTGTTGGTTTTGCAAGGGCTGGGTTAGATAACTATGACAATTACTCGCCTGGAGGAAGATCTGGTTTTAACACCCCTGCTTCATCTGCTCGCAACTCGTTTGAGCCGCATCCAATGGTTGCCGATGCCTGGGAATCTCTCAGAAAATCTCTAGTCCATTTTAGAGGTGCACCTGTTGGCACAATTGCAGCTGTTGATCATCAAGCTGAGGAAGTTCTAAATTACGATCAGGTGAATTTCTTAATCAGTACTAAAATTCAGTATTCTGATTTGGATATAATTTTACTCCATATACTTGGATATGAGTTATGATGTGTGTATGATGTACATTTATCTCTGCAAGTTTTCACTGGCCACATGAACCTGCAATATCACATATATCAAAGGTCTTGTGAAATTCTACAAGACATACAATCTGTGGTAACATGATTGAAATATGATAAGTACGCTCTGACATTCAACATAATCAGTTTAAAAATTTCAGGATCCGTTGACACCAGATGTCAAAGTTAACTTTGACACCAAATCTCATCTATTTATTTGTTTAATCAAAAGGCCTCTTTTTGTTCATTTAACCATTAATGTTGTTCTTTTTAGGAAAAGCATATAATTTACTGGCTTAACAGATTTCTTCCCGAAAATTGCTATCTATCTCTCTCTTTGCTCACTGACCTCCTCCCCAGAATGATAGCTAATTTTTTTTTTTTTTTTTTTTAATTTAAAGCCCAATGTGAAACCTATGTGTTACTCAAGTATCTATTTGTGTGCGTTACCAGATTGCTAGGAAAACAATACGAAACCTGGTGTCAATATAAAGGGTTAATTCATATATTTATATGCCTGTTACCAGATTGATAGGTAAAAATAATAATAATTTAACTAACAAAAGAAAGAGACCATTTTTCTTGGAACATGTGAGTTGAGAGCACGTGCTGGATGAGAAACATGCTTAAATCCCCTTCATTCTTATGGATTGATAGAAATGAAGATTGTAGCTGGATGTTTAATCAGGAAAGTCTTTCCTTTAACAAACAACTTGGCTTCTTGACATTTATGGATTGATAGAAATGAAGATTGTAGCTGGATGTTTAATCAGGAAAGTCTTTCCTTTAACAAACAACTTGGCCTCTTGACATTTTAGAGATAACAATAAGAATTTTATTTTAATGCTAGTGAAAATTCTACCCTGCAAAGAACAAAACAGGCAATTGAAAACTCAAATATGATAAATAAACTCATCCATAACTGTTATAATGATTCATTAAAACATAAAATTATGATAGATTTTTTTGCTTGTGAATAATTATTTGTTAATAGAAGAAACTCTGCAGTTGTTAGTTGTTGCCTCCACAAAGTACAGTGGACCAATTTTTTTACCTTTACACAGTCGTGGACATCGGAGAATGAGTATAACTTTTGATGATAAATTTTTCTCTTTTAGGTTTTTGTTCGAGATTTTGTCCCAAGTGCTCTAGCCTTTTTGATGAATGGTGAACCGGAAATAGTAAAAAATTTCTTGTTAAAGACACTACATCTTCAGGGGTGGGAGAAAAGAGTAGATAGGTTTAAACTTGGGGAAGGTGTGATGCCAGCTAGTTTCAAAGTCCTTCATGATGCCGTTAGGAAAACAGATACTCTTATTGCAGATTTTGGCGAAAGTGCAATCGGAAGAGTTGCTCCTGTTGACTCTGGATTCTGGTGGATCATTTTGCTTCGTGCTTACACAAAATCTACAGGGGACTTAACTCTGTCTGAATCTGATAGTTGTCAAAAAGGAATGAAACTTATATTGACTTTATGCTTGTCAGAGGGGTTTGACACATTTCCAACTCTGCTTTGTGCTGATGGATGCTGCATGATTGATAGAAGAATGGTAAGGCATAATTTTCAATTGTTTCACAGTATGTAATATGTTCTTATTGCCAACATTATCTAGTTATTTGGATGGTGCTTGTTGCATTCTATTGTTTTTGAAAACATTTTCCAATTTATTGTTCAAGGTTATGCAAATGCAATTACTTTTGTAACTTGTTACTAGTCTTACTCTTATTCAACTATGGGCCTGTTTGGATAAACAAATTGTTTGGAGCTTATAGCACAAGGGCTTATCATGTTTGGATAAGCTTGCTTAAGCTATTTTTATAGATTACAAATTCTATTTTATGCTATAAGTTGTTCTTATAGGCTATATTGGAGAAATAATGAAAATAAGTTGAAAAAAGCTTATGAAAACTGTCATAAGCTGTTTTTATAAATTCTCCTAAACAATCTCGTAAAGCTTATGCCAGTAGAGAAGCTCAAATAAGCCAATCCAAACAGGCCATATGTCAAATTCATCTAATGATGTGGCAACACATTATTGAGTGATACAAGAAATTTTTTCTATGCACATATAGTTTTAATCTCTTTAATATGTGGTTTCAATTCGAGGAACCGAAGTTCAACTCGTATTTTGGTGATTTTGAAGAACTTGAATACTATATTGATTGTTTCCTTCTCCTTGCAGGGTGTTTATGGATATCCTATTGAGATTCAAGCACTTTTCTTCATGGCATTGAGAAGTGCTTTGTCCATGCTCAAGCAAGATACTGCTGACGGAAAGGAGTGTGTAGAGCGTGTTGTGAAGCGTTTGCATGCACTAAGTTTTCACATGAGAAGCTACTTTTGGCTTGACTTCCAGCAACTAAATGACATTTATCGGTACAAGACTGAGGAGTACTCACATACTGCAGTAAATAAGTTTAATGTTATTCCGGATTCAATTCCAGAATGGGTGTTTGACTTTATGCCAACACGTGGTGGCTACTTCATTGGAAATGTCAGTCCAGCTCGAATGGATTTTCGATGGTTTGCTTTAGGAAACTGTGTTGCAATTCTTTCTTCTTTAGCAACTCCAGAGCAGTCAATGGCAATCATGGATCTTATTGAAGCTCGTTGGGATGAGTTGGTTGGAGAAATGCCGCTAAAAATTAGTTACCCTGCAATAGAAAGTCACGAGTGGCGAATTGTTACTGGTTGTGATCCTAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGGTTTTCCCTTTCTCTCATCATGCTTAGTTATTCAAAGTTCATTTAACTTGGGGATTTCTCTGTATAGCTTTTTCGTCGCAGAACTTTAATATAGTTTATTGTGGGATATTATACTAAATACAGAGTCATTTTTGGTACAGCCAAACAGATTGATAATACTTACCATACCTCTGATTTTGATCCGAGTTCATGCCTTAACTTTTTCTTTTCCCCCTCATCCTTTCTATGGATAATCTGATTTATACAGTGGTTATTGGTTTATGTTTGATAGAAAAGATTTGCAACATATTTGGTACATAGTTTTGATGTCCTTCTCTAACTTTTCATTTTGTTTCATGCTCTCGGGTGCAGTGCTCCTATGGCTTGTAACAGCTGCTTGCATCAAGACAGGGCGACCACAAATAGCAAGACGTGCAATTGAACTTGCCGAGAGTCGTTTACTGAAGGATGGATGGCCTGAATATTACGATGGTAAACTTGGAAGATATGTTGGGAAACAGGCAAGAAAATACCAAACATGGTCTATTGCGGGTTATTTGGTGGCCAAGATGATGCTGGAGGACCCCTCACACTTGGGGATGATTTCCCTTGAAGAAGACAAGCAGATGAAACCAGTGATTAAAAGATCATCTTCTTGGACTTGCTGA

Protein sequence

>MS.gene33980.t1

MDGHMGIRKVGSQCSMAEMDDFDLTRLLDRPRLNIERQRSFDERSLSELSVGFARAGLDNYDNYSPGGRSGFNTPASSARNSFEPHPMVADAWESLRKSLVHFRGAPVGTIAAVDHQAEEVLNYDQVFVRDFVPSALAFLMNGEPEIVKNFLLKTLHLQGWEKRVDRFKLGEGVMPASFKVLHDAVRKTDTLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLSESDSCQKGMKLILTLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRSALSMLKQDTADGKECVERVVKRLHALSFHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDSIPEWVFDFMPTRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWDELVGEMPLKISYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLVTAACIKTGRPQIARRAIELAESRLLKDGWPEYYDGKLGRYVGKQARKYQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQMKPVIKRSSSWTC