AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042192

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042192.t1 MTR_4g132110 98.507 335 5 0 1 335 1 335 0.0 689
MS.gene042192.t1 MTR_4g132110 97.059 340 5 1 1 335 1 340 0.0 684
MS.gene042192.t1 MTR_1g066640 62.626 297 111 0 32 328 27 323 4.11e-143 407
MS.gene042192.t1 MTR_1g066380 61.953 297 113 0 32 328 27 323 7.45e-142 404
MS.gene042192.t1 MTR_1g066710 61.616 297 114 0 32 328 27 323 2.98e-139 397
MS.gene042192.t1 MTR_1g066680 59.596 297 119 1 32 328 27 322 4.00e-131 377
MS.gene042192.t1 MTR_1g066380 61.417 254 98 0 75 328 2 255 5.35e-117 338
MS.gene042192.t1 MTR_4g132490 37.461 323 196 4 10 328 7 327 2.40e-69 219
MS.gene042192.t1 MTR_7g086820 38.284 303 177 4 32 331 20 315 1.08e-65 210
MS.gene042192.t1 MTR_8g062780 38.158 304 179 3 32 328 23 324 2.19e-65 209
MS.gene042192.t1 MTR_0286s0010 37.261 314 189 4 21 328 23 334 1.01e-64 208
MS.gene042192.t1 MTR_6g008075 37.261 314 189 4 21 328 23 334 1.01e-64 208
MS.gene042192.t1 MTR_1g090760 36.061 330 193 6 8 329 12 331 1.20e-63 205
MS.gene042192.t1 MTR_5g021060 38.333 300 175 4 36 328 34 330 2.47e-63 204
MS.gene042192.t1 MTR_4g046713 36.242 298 183 2 36 328 31 326 3.34e-61 199
MS.gene042192.t1 MTR_6g043460 35.099 302 188 4 31 330 35 330 2.41e-59 194
MS.gene042192.t1 MTR_3g094650 35.048 311 197 4 15 324 12 318 1.52e-58 191
MS.gene042192.t1 MTR_7g086870 36.027 297 183 3 32 328 22 311 1.65e-58 191
MS.gene042192.t1 MTR_7g029030 35.185 324 197 7 8 328 7 320 1.93e-58 191
MS.gene042192.t1 MTR_4g087965 34.139 331 205 6 7 326 16 344 2.14e-58 192
MS.gene042192.t1 MTR_5g083860 34.277 318 203 4 12 328 13 325 2.21e-58 191
MS.gene042192.t1 MTR_6g043280 34.437 302 189 5 31 330 40 334 2.31e-58 191
MS.gene042192.t1 MTR_2g437770 37.255 306 175 6 29 328 47 341 2.73e-58 191
MS.gene042192.t1 MTR_5g074970 35.202 321 202 4 10 328 10 326 2.91e-58 191
MS.gene042192.t1 MTR_2g029820 37.013 308 181 5 35 333 32 335 3.16e-58 192
MS.gene042192.t1 MTR_1g101830 35.535 318 193 5 17 328 11 322 5.18e-58 190
MS.gene042192.t1 MTR_2g078610 34.234 333 183 6 28 325 72 403 7.86e-58 192
MS.gene042192.t1 MTR_2g067440 33.628 339 190 6 20 325 48 384 1.59e-57 191
MS.gene042192.t1 MTR_2g029750 36.482 307 184 4 35 333 32 335 2.53e-57 189
MS.gene042192.t1 MTR_6g043240 35.000 300 184 5 31 328 41 331 4.09e-57 189
MS.gene042192.t1 MTR_8g076820 35.762 302 180 5 36 328 34 330 4.57e-57 188
MS.gene042192.t1 MTR_2g029830 35.238 315 193 4 27 333 23 334 7.16e-57 188
MS.gene042192.t1 MTR_2g028980 36.601 306 183 4 36 333 33 335 8.31e-57 188
MS.gene042192.t1 MTR_2g029815 36.156 307 183 5 36 333 33 335 1.31e-56 187
MS.gene042192.t1 MTR_2g029800 36.190 315 190 4 27 333 24 335 1.47e-56 187
MS.gene042192.t1 MTR_2g088770 35.331 317 194 6 19 328 13 325 1.58e-56 186
MS.gene042192.t1 MTR_2g008710 34.483 319 193 5 19 328 14 325 1.59e-56 186
MS.gene042192.t1 MTR_4g029200 35.235 298 187 3 32 328 46 338 1.20e-55 184
MS.gene042192.t1 MTR_3g466200 33.846 325 201 7 2 324 4 316 1.34e-55 184
MS.gene042192.t1 MTR_8g075100 35.922 309 175 6 30 328 24 319 1.36e-55 184
MS.gene042192.t1 MTR_2g077990 33.333 333 186 6 28 325 72 403 1.87e-55 186
MS.gene042192.t1 MTR_2g084080 33.754 317 199 4 18 328 6 317 2.00e-55 183
MS.gene042192.t1 MTR_1g077000 34.007 297 188 3 32 328 39 327 2.09e-55 184
MS.gene042192.t1 MTR_1g054205 33.234 334 199 7 5 328 7 326 2.44e-55 183
MS.gene042192.t1 MTR_2g084110 34.472 322 199 5 8 328 7 317 3.49e-55 182
MS.gene042192.t1 MTR_4g114210 35.312 320 190 5 19 328 8 320 6.32e-55 182
MS.gene042192.t1 MTR_4g125940 34.202 307 189 5 32 329 28 330 6.32e-55 182
MS.gene042192.t1 MTR_7g107520 36.474 329 188 9 7 328 6 320 1.49e-54 181
MS.gene042192.t1 MTR_2g029740 35.948 306 185 4 36 333 33 335 5.28e-54 181
MS.gene042192.t1 MTR_0155s0040 34.437 302 182 5 31 328 26 315 1.31e-53 179
MS.gene042192.t1 MTR_2g084090 32.915 319 204 4 13 328 7 318 1.68e-53 178
MS.gene042192.t1 MTR_7g093370 33.642 324 199 7 15 328 54 371 1.84e-53 180
MS.gene042192.t1 MTR_1g086320 34.535 333 198 7 6 328 11 333 3.33e-53 178
MS.gene042192.t1 MTR_2g084000 32.372 312 204 4 19 328 13 319 4.98e-53 177
MS.gene042192.t1 MTR_5g022870 33.746 323 185 5 19 328 10 316 6.20e-53 177
MS.gene042192.t1 MTR_3g072190 34.056 323 194 5 7 324 6 314 7.43e-53 177
MS.gene042192.t1 MTR_5g014100 35.275 309 185 5 32 328 26 331 7.96e-53 177
MS.gene042192.t1 MTR_4g127670 33.987 306 187 6 32 328 24 323 8.12e-53 177
MS.gene042192.t1 MTR_4g030890 32.692 312 196 5 23 328 93 396 8.56e-53 179
MS.gene042192.t1 MTR_2g040000 34.405 311 176 6 36 329 33 332 1.21e-52 176
MS.gene042192.t1 MTR_1g086490 34.226 336 202 6 11 328 6 340 2.10e-52 176
MS.gene042192.t1 MTR_4g031140 32.781 302 189 5 36 330 32 326 3.13e-52 176
MS.gene042192.t1 MTR_3g105790 33.131 329 199 6 7 328 8 322 3.68e-52 175
MS.gene042192.t1 MTR_2g084020 32.722 327 205 6 4 328 5 318 5.07e-52 174
MS.gene042192.t1 MTR_3g092990 33.003 303 195 3 32 328 26 326 6.63e-52 174
MS.gene042192.t1 MTR_1g009750 34.043 329 203 7 10 328 4 328 6.95e-52 174
MS.gene042192.t1 MTR_2g078280 32.919 322 180 6 28 314 72 392 9.58e-52 176
MS.gene042192.t1 MTR_2g099175 35.390 308 182 5 32 329 36 336 1.23e-51 174
MS.gene042192.t1 MTR_4g133800 35.099 302 180 5 34 329 43 334 1.77e-51 174
MS.gene042192.t1 MTR_6g027440 33.000 300 192 3 32 328 21 314 1.83e-51 173
MS.gene042192.t1 MTR_5g049280 31.746 315 197 6 27 328 28 337 2.66e-51 173
MS.gene042192.t1 MTR_5g016010 34.069 317 197 5 19 326 14 327 3.59e-51 172
MS.gene042192.t1 MTR_4g029180 35.690 297 183 5 35 328 30 321 3.62e-51 172
MS.gene042192.t1 MTR_3g094670 32.595 316 206 4 10 324 9 318 4.05e-51 172
MS.gene042192.t1 MTR_1g025980 33.022 321 187 7 19 326 11 316 4.52e-51 172
MS.gene042192.t1 MTR_3g094630 33.846 325 198 5 10 328 9 322 5.07e-51 172
MS.gene042192.t1 MTR_4g029170 34.437 302 190 5 30 328 25 321 7.17e-51 172
MS.gene042192.t1 MTR_2g029850 34.494 316 186 6 24 328 25 330 7.71e-51 172
MS.gene042192.t1 MTR_7g072510 32.550 298 195 3 32 328 20 312 1.85e-50 170
MS.gene042192.t1 MTR_2g084010 33.028 327 204 6 4 328 5 318 2.82e-50 170
MS.gene042192.t1 MTR_4g029190 35.034 294 187 2 36 328 50 340 6.01e-50 170
MS.gene042192.t1 MTR_4g083710 31.988 322 214 4 9 328 6 324 1.18e-49 169
MS.gene042192.t1 MTR_4g095450 32.770 296 192 4 35 326 30 322 8.34e-49 166
MS.gene042192.t1 MTR_2g029830 36.604 265 157 4 77 333 5 266 1.48e-48 164
MS.gene042192.t1 MTR_1g038680 33.115 305 191 6 34 328 31 332 1.55e-48 166
MS.gene042192.t1 MTR_1g115900 33.634 333 202 9 1 328 3 321 1.66e-48 166
MS.gene042192.t1 MTR_4g125940 35.401 274 164 5 65 329 6 275 1.76e-48 164
MS.gene042192.t1 MTR_7g072480 32.154 311 203 4 19 328 13 316 5.20e-48 164
MS.gene042192.t1 MTR_5g017850 32.673 303 195 4 32 328 27 326 1.05e-47 164
MS.gene042192.t1 MTR_5g033470 33.770 305 194 4 32 328 73 377 2.14e-47 164
MS.gene042192.t1 MTR_5g017860 33.333 303 193 4 32 328 27 326 2.34e-47 162
MS.gene042192.t1 MTR_0147s0010 32.595 316 178 5 32 325 77 379 2.92e-47 164
MS.gene042192.t1 MTR_1g022970 35.161 310 182 5 31 328 45 347 4.26e-47 162
MS.gene042192.t1 MTR_4g074995 31.613 310 196 4 21 328 13 308 1.61e-46 160
MS.gene042192.t1 MTR_5g074860 32.424 330 203 8 2 324 5 321 4.36e-46 159
MS.gene042192.t1 MTR_3g467600 31.707 328 207 8 7 328 8 324 6.78e-46 159
MS.gene042192.t1 MTR_3g466180 33.639 327 200 7 4 328 12 323 1.00e-45 158
MS.gene042192.t1 MTR_2g029730 32.450 302 191 5 36 328 29 326 1.56e-45 158
MS.gene042192.t1 MTR_2g067450 31.715 309 184 6 32 325 11 307 1.83e-45 157
MS.gene042192.t1 MTR_2g029860 31.212 330 215 5 8 328 4 330 4.56e-45 157
MS.gene042192.t1 MTR_2g029560 32.226 301 193 4 36 328 28 325 9.36e-45 156
MS.gene042192.t1 MTR_2g029910 32.566 304 193 5 35 329 33 333 1.35e-44 156
MS.gene042192.t1 MTR_3g092990 31.683 303 188 4 32 328 26 315 1.78e-44 155
MS.gene042192.t1 MTR_2g008730 31.329 316 177 7 22 328 17 301 2.44e-44 154
MS.gene042192.t1 MTR_1g009750 31.804 327 196 8 10 328 4 311 1.14e-43 152
MS.gene042192.t1 MTR_7g026990 31.973 294 193 4 36 328 35 322 1.31e-43 153
MS.gene042192.t1 MTR_5g074710 33.224 304 191 6 32 329 25 322 1.38e-43 152
MS.gene042192.t1 MTR_3g072190 35.039 254 151 4 76 324 3 247 3.98e-43 149
MS.gene042192.t1 MTR_4g122640 31.126 302 200 4 32 328 38 336 4.41e-43 152
MS.gene042192.t1 MTR_5g074760 32.787 305 193 6 32 330 25 323 4.76e-43 151
MS.gene042192.t1 MTR_4g074990 30.097 309 199 3 21 328 13 305 7.40e-43 150
MS.gene042192.t1 MTR_5g074740 32.566 304 193 6 32 329 25 322 9.31e-42 148
MS.gene042192.t1 MTR_2g008160 32.468 308 189 7 32 328 24 323 1.83e-41 147
MS.gene042192.t1 MTR_4g074980 28.931 318 196 7 12 328 6 294 1.03e-37 136
MS.gene042192.t1 MTR_4g074980 31.600 250 168 3 12 260 6 253 1.52e-37 135
MS.gene042192.t1 MTR_3g105790 33.193 238 147 3 98 328 14 246 6.31e-37 133
MS.gene042192.t1 MTR_5g074860 28.485 330 177 8 2 324 5 282 1.09e-29 115
MS.gene042192.t1 MTR_2g008160 38.286 175 101 4 32 204 24 193 2.79e-28 109
MS.gene042192.t1 MTR_2g008160 28.947 304 170 7 32 328 24 288 2.83e-28 111
MS.gene042192.t1 MTR_5g074700 29.258 229 141 6 104 329 5 215 3.45e-23 95.9
MS.gene042192.t1 MTR_3g072260 39.552 134 75 2 7 139 6 134 2.46e-22 91.7
MS.gene042192.t1 MTR_2g078560 27.354 223 129 4 136 325 95 317 6.94e-21 92.0
MS.gene042192.t1 MTR_2g029880 29.146 199 121 4 137 328 3 188 3.22e-20 87.8
MS.gene042192.t1 MTR_2g077980 27.273 286 159 9 84 325 1 281 3.76e-20 89.4
MS.gene042192.t1 MTR_3g072210 31.414 191 124 4 140 328 53 238 7.90e-20 87.4
MS.gene042192.t1 MTR_7g072490 27.313 227 105 3 79 304 3 170 1.83e-19 85.5
MS.gene042192.t1 MTR_7g086790 30.108 186 111 3 79 264 17 183 1.38e-18 82.8
MS.gene042192.t1 MTR_6g048160 50.725 69 31 1 71 139 22 87 4.84e-16 72.8
MS.gene042192.t1 MTR_1g098320 44.304 79 44 0 251 329 47 125 4.63e-15 71.6
MS.gene042192.t1 MTR_5g058120 29.070 172 112 3 163 333 3 165 4.78e-15 74.3
MS.gene042192.t1 MTR_1g089005 35.593 118 70 1 35 146 18 135 7.49e-14 68.6
MS.gene042192.t1 MTR_4g114220 40.860 93 44 4 48 138 17 100 3.58e-12 63.5
MS.gene042192.t1 MTR_7g107500 43.243 74 41 1 255 328 25 97 2.95e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042192.t1 AT4G21960 78.287 327 71 0 5 331 4 330 0.0 553
MS.gene042192.t1 AT2G37130 59.459 296 119 1 34 328 1 296 1.15e-134 385
MS.gene042192.t1 AT2G37130 59.468 301 120 2 30 328 27 327 2.34e-134 385
MS.gene042192.t1 AT5G40150 38.339 313 184 4 20 328 21 328 3.93e-67 214
MS.gene042192.t1 AT5G14130 36.190 315 190 5 21 328 20 330 1.80e-64 207
MS.gene042192.t1 AT5G14130 36.190 315 190 5 21 328 61 371 7.47e-64 207
MS.gene042192.t1 AT4G33870 32.948 346 195 3 19 327 55 400 7.80e-64 207
MS.gene042192.t1 AT5G66390 36.061 330 198 7 10 331 12 336 6.17e-63 203
MS.gene042192.t1 AT4G36430 36.842 304 182 5 32 328 30 330 1.66e-62 202
MS.gene042192.t1 AT2G18150 34.954 329 198 5 9 324 7 332 5.13e-62 201
MS.gene042192.t1 AT2G18140 34.940 332 201 5 9 328 7 335 7.18e-62 201
MS.gene042192.t1 AT1G24110 36.957 322 194 4 14 328 3 322 1.06e-61 200
MS.gene042192.t1 AT1G71695 36.304 303 186 3 31 330 43 341 1.96e-61 200
MS.gene042192.t1 AT3G28200 37.874 301 178 4 32 328 21 316 5.09e-61 198
MS.gene042192.t1 AT5G05340 35.786 299 186 4 32 328 30 324 7.57e-61 197
MS.gene042192.t1 AT2G24800 36.184 304 182 5 32 328 31 329 8.33e-61 197
MS.gene042192.t1 AT5G15180 34.545 330 197 6 7 328 11 329 2.74e-60 196
MS.gene042192.t1 AT1G05260 34.557 327 203 6 10 329 4 326 3.75e-60 196
MS.gene042192.t1 AT5G06730 34.663 326 200 5 15 330 14 336 4.01e-60 197
MS.gene042192.t1 AT3G17070 33.436 326 203 7 7 324 16 335 9.17e-60 195
MS.gene042192.t1 AT3G03670 34.835 333 191 3 10 328 1 321 2.21e-59 194
MS.gene042192.t1 AT4G17690 34.667 300 192 2 32 329 26 323 5.91e-59 193
MS.gene042192.t1 AT5G17820 35.235 298 176 4 32 324 24 309 3.56e-58 190
MS.gene042192.t1 AT4G31760 33.651 315 192 4 21 328 22 326 7.18e-58 190
MS.gene042192.t1 AT1G05240 34.641 306 185 5 32 328 26 325 9.95e-58 189
MS.gene042192.t1 AT1G05250 34.641 306 185 5 32 328 26 325 9.95e-58 189
MS.gene042192.t1 AT1G30870 36.218 312 181 6 29 332 48 349 2.00e-57 189
MS.gene042192.t1 AT2G18980 35.423 319 190 6 19 328 12 323 3.13e-57 188
MS.gene042192.t1 AT3G50990 36.333 300 181 4 36 328 45 341 3.29e-57 189
MS.gene042192.t1 AT4G08780 35.599 309 180 7 35 330 27 329 4.03e-57 189
MS.gene042192.t1 AT2G35380 34.877 324 194 6 19 328 15 335 5.87e-57 188
MS.gene042192.t1 AT5G17820 35.235 298 176 4 32 324 77 362 6.22e-57 189
MS.gene042192.t1 AT5G24070 35.088 342 192 7 10 328 1 335 1.24e-56 187
MS.gene042192.t1 AT3G01190 35.016 317 192 6 19 328 12 321 1.99e-56 186
MS.gene042192.t1 AT5G06720 34.259 324 200 5 15 328 13 333 2.81e-56 186
MS.gene042192.t1 AT2G43480 37.171 304 173 6 32 324 35 331 3.27e-56 186
MS.gene042192.t1 AT5G47000 34.459 296 189 3 32 324 33 326 7.64e-56 185
MS.gene042192.t1 AT4G11290 34.043 329 199 6 10 328 6 326 7.72e-56 185
MS.gene042192.t1 AT2G22420 32.317 328 205 6 13 330 1 321 8.19e-56 185
MS.gene042192.t1 AT5G64120 33.333 303 191 4 30 328 33 328 1.33e-55 184
MS.gene042192.t1 AT4G33420 34.228 298 188 3 31 328 36 325 1.97e-55 184
MS.gene042192.t1 AT4G08770 34.951 309 182 6 35 330 27 329 2.83e-55 184
MS.gene042192.t1 AT5G51890 33.770 305 188 5 31 328 25 322 9.84e-55 182
MS.gene042192.t1 AT4G33420 34.228 298 188 3 31 328 83 372 9.96e-55 183
MS.gene042192.t1 AT4G30170 33.987 306 186 5 32 328 27 325 3.84e-54 180
MS.gene042192.t1 AT1G68850 31.847 314 203 6 25 328 23 335 1.66e-53 179
MS.gene042192.t1 AT1G14550 34.405 311 197 5 21 328 15 321 9.27e-53 177
MS.gene042192.t1 AT2G41480 34.472 322 190 6 19 328 16 328 1.25e-52 176
MS.gene042192.t1 AT1G77100 34.663 326 196 8 8 328 6 319 2.30e-52 176
MS.gene042192.t1 AT5G19890 36.039 308 172 7 35 329 33 328 2.38e-52 176
MS.gene042192.t1 AT4G16270 35.484 310 178 8 32 328 48 348 2.76e-52 176
MS.gene042192.t1 AT5G42180 34.797 296 177 5 36 324 27 313 2.88e-52 175
MS.gene042192.t1 AT4G37520 32.673 303 192 5 35 328 30 329 3.02e-52 176
MS.gene042192.t1 AT4G37530 33.333 303 190 5 35 328 30 329 3.22e-52 175
MS.gene042192.t1 AT3G49110 32.602 319 202 5 21 329 22 337 6.91e-52 175
MS.gene042192.t1 AT4G26010 35.161 310 187 6 20 328 13 309 1.38e-51 173
MS.gene042192.t1 AT1G14540 34.228 298 184 5 36 328 25 315 2.14e-51 173
MS.gene042192.t1 AT4G26010 35.161 310 187 6 20 328 41 337 2.30e-51 173
MS.gene042192.t1 AT1G34510 34.122 296 182 5 35 328 25 309 5.22e-51 172
MS.gene042192.t1 AT3G21770 32.450 302 195 4 32 327 29 327 7.15e-51 172
MS.gene042192.t1 AT4G37520 32.673 303 189 6 35 328 30 326 9.61e-51 171
MS.gene042192.t1 AT2G38390 31.661 319 206 5 21 330 20 335 2.71e-50 171
MS.gene042192.t1 AT2G34060 34.098 305 189 5 32 326 42 344 3.15e-50 171
MS.gene042192.t1 AT4G25980 34.202 307 186 5 32 328 26 326 7.50e-50 169
MS.gene042192.t1 AT2G38380 32.288 319 204 5 21 330 20 335 1.41e-49 169
MS.gene042192.t1 AT5G58400 30.671 313 212 4 14 324 12 321 1.61e-49 168
MS.gene042192.t1 AT5G58390 34.084 311 193 6 19 324 9 312 1.93e-49 168
MS.gene042192.t1 AT3G49120 33.229 319 191 7 25 330 28 337 3.58e-49 168
MS.gene042192.t1 AT3G32980 32.288 319 203 5 21 329 20 335 5.69e-49 167
MS.gene042192.t1 AT5G39580 32.063 315 202 5 19 328 12 319 1.25e-48 166
MS.gene042192.t1 AT5G67400 31.928 332 210 6 6 328 5 329 3.03e-48 165
MS.gene042192.t1 AT2G39040 34.416 308 188 7 32 328 46 350 3.22e-48 166
MS.gene042192.t1 AT5G19880 32.716 324 199 8 17 328 13 329 5.16e-48 164
MS.gene042192.t1 AT1G44970 34.768 302 184 5 36 328 49 346 1.30e-47 164
MS.gene042192.t1 AT1G49570 32.550 298 189 5 36 324 52 346 1.75e-47 164
MS.gene042192.t1 AT3G49960 31.373 306 198 5 32 328 27 329 1.23e-46 161
MS.gene042192.t1 AT5G64110 31.692 325 200 7 17 328 15 330 1.14e-45 158
MS.gene042192.t1 AT3G17070 33.730 252 160 5 79 324 22 272 1.82e-44 154
MS.gene042192.t1 AT4G37530 33.984 256 157 5 35 281 30 282 3.48e-44 153
MS.gene042192.t1 AT5G22410 30.982 326 201 8 7 324 12 321 4.43e-43 152
MS.gene042192.t1 AT2G35380 33.333 237 144 4 103 328 14 247 1.49e-38 137
MS.gene042192.t1 AT5G64100 29.703 303 195 5 34 328 39 331 4.57e-38 138
MS.gene042192.t1 AT2G24800 37.500 168 102 1 32 199 31 195 3.49e-32 120
MS.gene042192.t1 AT4G25980 38.323 167 100 2 32 198 71 234 3.95e-29 114
MS.gene042192.t1 AT5G39580 35.417 192 120 2 19 210 12 199 1.09e-28 111
MS.gene042192.t1 AT4G08390 30.213 235 128 10 94 316 159 369 3.36e-12 67.0
MS.gene042192.t1 AT4G08390 30.213 235 128 10 94 316 160 370 3.50e-12 67.0
MS.gene042192.t1 AT4G08390 30.213 235 128 10 94 316 160 370 3.50e-12 67.0
MS.gene042192.t1 AT4G08390 30.213 235 128 10 94 316 160 370 3.50e-12 67.0
MS.gene042192.t1 AT3G42570 30.088 113 78 1 87 198 37 149 1.03e-11 62.8

Find 74 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGCTGTTCTTGACAAATT+TGG 0.198377 8.2:+2235001 MS.gene042192:CDS
AGCATGTGTGGAATGTGTTC+TGG 0.253198 8.2:-2235698 None:intergenic
CAATCCTCTTACTGGCATAA+AGG 0.280930 8.2:+2235964 MS.gene042192:CDS
TCAGAAAACAATCCTCTTAC+TGG 0.282864 8.2:+2235956 MS.gene042192:CDS
TTTCCATGATTGTGCTGTTC+AGG 0.292836 8.2:+2234210 MS.gene042192:CDS
CTCACGTACTGCACGGCCTT+AGG 0.320944 8.2:-2235749 None:intergenic
TTCAAAGCTGGATCAACTTC+GGG 0.331102 8.2:-2235674 None:intergenic
CCGTGGCACACCGATGATTC+TGG 0.332086 8.2:+2235778 MS.gene042192:CDS
TTAGGGTCGGGGATTGAATC+AGG 0.335943 8.2:-2235731 None:intergenic
TCTTTCAACAGCTTCTTTGA+TGG 0.341406 8.2:-2234436 None:intergenic
CTCTTCATGGTGCTGCTTGT+TGG 0.347769 8.2:-2236014 None:intergenic
TACTGCACGGCCTTAGGGTC+GGG 0.350273 8.2:-2235743 None:intergenic
TCTTCTGCAGCAGAAGATAA+TGG 0.359287 8.2:+2234070 MS.gene042192:CDS
TTCATATTCAAGGCTCTTCA+TGG 0.363771 8.2:-2236027 None:intergenic
CCTGGAGTTGTTGCTTTGCT+TGG 0.368513 8.2:+2235043 MS.gene042192:CDS
TGCTAGAGACGGCATTGTTT+CGG 0.370380 8.2:+2234503 MS.gene042192:CDS
CTCAGACAAGCTTCTTCTTG+TGG 0.373582 8.2:-2234364 None:intergenic
TTTGTCAAGAACAGCAGAAA+TGG 0.379601 8.2:-2234996 None:intergenic
CAAGAACACGACAGAAGCTT+TGG 0.380538 8.2:+2234387 MS.gene042192:CDS
TAAGCCTTATGTGAAGAAAA+TGG 0.380550 8.2:+2235880 MS.gene042192:CDS
AATCCTCTTACTGGCATAAA+GGG 0.383963 8.2:+2235965 MS.gene042192:CDS
TCACCCTTTATGCCAGTAAG+AGG 0.399088 8.2:-2235968 None:intergenic
TCACGTACTGCACGGCCTTA+GGG 0.405904 8.2:-2235748 None:intergenic
AAAGAGTAGAGTGGATCTGT+TGG 0.414159 8.2:+2234946 MS.gene042192:CDS
CAACTATTACAGAAATATCT+TGG 0.416192 8.2:+2235805 MS.gene042192:CDS
CCATATATTCCTCTGAAAAC+AGG 0.426035 8.2:+2234908 MS.gene042192:CDS
CAAGAAGAGTTGTGGAGAAA+AGG 0.441478 8.2:-2234041 None:intergenic
ACGACAGAAGCTTTGGTTTG+AGG 0.441618 8.2:+2234394 MS.gene042192:CDS
GAGCCAAGAGTATTTCTTCA+AGG 0.443217 8.2:+2235907 MS.gene042192:CDS
GTGCACCAACTTTGTACAAT+GGG 0.443896 8.2:-2235642 None:intergenic
ATCAATTAGCACATGACAAA+AGG 0.444587 8.2:+2235855 MS.gene042192:CDS
AAGAACAAGAATATCAGAAC+AGG 0.452772 8.2:-2234478 None:intergenic
GCATGTGTGGAATGTGTTCT+GGG 0.458580 8.2:-2235697 None:intergenic
GAGTAGAGTGGATCTGTTGG+AGG 0.483109 8.2:+2234949 MS.gene042192:CDS
TTCCTCTGAAAACAGGAAGA+AGG 0.485303 8.2:+2234915 MS.gene042192:CDS
GAAGAAATACTCTTGGCTCT+TGG 0.486260 8.2:-2235903 None:intergenic
ACAAGAACACTGCTTTCTCT+TGG 0.492910 8.2:+2234176 MS.gene042192:CDS
ATGTGTTCTGGGTTCAAAGC+TGG 0.498992 8.2:-2235686 None:intergenic
TTGATGATTTCTTCAGCTTG+AGG 0.502637 8.2:-2234124 None:intergenic
CTTTGTAGTAATTCATAACA+AGG 0.504671 8.2:-2234093 None:intergenic
GTTCAAAGCTGGATCAACTT+CGG 0.508459 8.2:-2235675 None:intergenic
CTTGTTCTTTCTGCTAGAGA+CGG 0.510161 8.2:+2234492 MS.gene042192:CDS
CTTGACAAATTTGGTGCCAT+GGG 0.510381 8.2:+2235010 MS.gene042192:CDS
ACTCCTTGAAGAAATACTCT+TGG 0.510592 8.2:-2235910 None:intergenic
TTACCTGAACAGCACAATCA+TGG 0.515336 8.2:-2234213 None:intergenic
GAAATGGACTCATTGTGGTC+AGG 0.515626 8.2:-2234980 None:intergenic
TGATTCAATCCCCGACCCTA+AGG 0.518826 8.2:+2235733 MS.gene042192:CDS
GAAACAATCAAGAAGAGTTG+TGG 0.523504 8.2:-2234049 None:intergenic
CCAAGCAAAGCAACAACTCC+AGG 0.528358 8.2:-2235043 None:intergenic
TCCTCTGAAAACAGGAAGAA+GGG 0.529591 8.2:+2234916 MS.gene042192:CDS
GGATGGTAGAAAGAGTAGAG+TGG 0.529860 8.2:+2234937 MS.gene042192:CDS
GATCAACTTCGGGGTACAAA+CGG 0.530383 8.2:-2235664 None:intergenic
ACTGCACGGCCTTAGGGTCG+GGG 0.534884 8.2:-2235742 None:intergenic
TAGAACCCATTGTACAAAGT+TGG 0.537879 8.2:+2235637 MS.gene042192:CDS
GTACTGCACGGCCTTAGGGT+CGG 0.543623 8.2:-2235744 None:intergenic
GCTGTTGAAAGAGAGTGTCC+TGG 0.548732 8.2:+2234447 MS.gene042192:CDS
TCTTGACAAATTTGGTGCCA+TGG 0.553724 8.2:+2235009 MS.gene042192:CDS
CAGAAATATCTTGGACAACA+AGG 0.554550 8.2:+2235814 MS.gene042192:CDS
TCAGAACAGGAAACAACTCC+AGG 0.558222 8.2:-2234465 None:intergenic
GGTGCACCAACTTTGTACAA+TGG 0.571949 8.2:-2235643 None:intergenic
CCAGAATCATCGGTGTGCCA+CGG 0.577205 8.2:-2235778 None:intergenic
GCCATGGGAATTGACACTCC+TGG 0.580533 8.2:+2235025 MS.gene042192:CDS
TCCAGGAGTGTCAATTCCCA+TGG 0.587204 8.2:-2235026 None:intergenic
CTGAAAACAGGAAGAAGGGA+TGG 0.593752 8.2:+2234920 MS.gene042192:CDS
GGGCACTTCTTAAGCATGTG+TGG 0.604093 8.2:-2235710 None:intergenic
TGGACTCATTGTGGTCAGGA+AGG 0.609208 8.2:-2234976 None:intergenic
TAGTTGTTATCCAGAATCAT+CGG 0.611911 8.2:-2235788 None:intergenic
TGAACAGGAGCACACAGTGT+TGG 0.623049 8.2:+2235614 MS.gene042192:intron
TAGGGTCGGGGATTGAATCA+GGG 0.623430 8.2:-2235730 None:intergenic
CAGCAGAAATGGACTCATTG+TGG 0.630190 8.2:-2234985 None:intergenic
GTCGTTTCTCACGTACTGCA+CGG 0.635627 8.2:-2235756 None:intergenic
AGAAATATCTTGGACAACAA+GGG 0.644547 8.2:+2235815 MS.gene042192:CDS
TCAAAGCTGGATCAACTTCG+GGG 0.715119 8.2:-2235673 None:intergenic
CAGTACGTGAGAAACGACCG+TGG 0.748565 8.2:+2235761 MS.gene042192:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTAATTAATGAAGA+AGG - chr8.2:2235092-2235111 None:intergenic 10.0%
!! ACATTAAATGATATATATTA+CGG - chr8.2:2235572-2235591 None:intergenic 10.0%
!!! AGAAAAAACATGTTTTTTTA+AGG + chr8.2:2234590-2234609 MS.gene042192:intron 15.0%
!!! ATGTTCTCATTTTATTAAAA+TGG + chr8.2:2235131-2235150 MS.gene042192:intron 15.0%
!! AAATGATATATATTACGGTA+TGG - chr8.2:2235567-2235586 None:intergenic 20.0%
!! CTACTCTTCAATTTAATAAT+AGG - chr8.2:2234729-2234748 None:intergenic 20.0%
!! TTATTAAATTGAAGAGTAGT+TGG + chr8.2:2234730-2234749 MS.gene042192:intron 20.0%
!!! AAATTAACAGTTTTGTGTAT+TGG - chr8.2:2234690-2234709 None:intergenic 20.0%
!!! TAACAATTATTTTGTTGAAC+AGG + chr8.2:2235599-2235618 MS.gene042192:intron 20.0%
! AGATAGATAAATCCAAATTG+TGG + chr8.2:2235219-2235238 MS.gene042192:intron 25.0%
! ATAGATAAATCCAAATTGTG+GGG + chr8.2:2235221-2235240 MS.gene042192:intron 25.0%
! CAACTATTACAGAAATATCT+TGG + chr8.2:2235805-2235824 MS.gene042192:CDS 25.0%
! CTTTGTAGTAATTCATAACA+AGG - chr8.2:2234096-2234115 None:intergenic 25.0%
! GATAGATAAATCCAAATTGT+GGG + chr8.2:2235220-2235239 MS.gene042192:intron 25.0%
! GTATCAAATTGAGTTATACA+AGG + chr8.2:2234644-2234663 MS.gene042192:intron 25.0%
! TTTAACTCATTTAGATCCAA+TGG + chr8.2:2235366-2235385 MS.gene042192:intron 25.0%
!!! AACATGTTTTTTTAAGGACA+AGG + chr8.2:2234596-2234615 MS.gene042192:intron 25.0%
!!! AAGAAGGTGTTTAATTAGTA+TGG - chr8.2:2235076-2235095 None:intergenic 25.0%
AACAAAAGTCAAAGCAAATC+TGG - chr8.2:2234771-2234790 None:intergenic 30.0%
AAGAACAAGAATATCAGAAC+AGG - chr8.2:2234481-2234500 None:intergenic 30.0%
AGAAATATCTTGGACAACAA+GGG + chr8.2:2235815-2235834 MS.gene042192:CDS 30.0%
ATCAATTAGCACATGACAAA+AGG + chr8.2:2235855-2235874 MS.gene042192:CDS 30.0%
GGATCTAAATGAGTTAAATG+TGG - chr8.2:2235364-2235383 None:intergenic 30.0%
TAGTTGTTATCCAGAATCAT+CGG - chr8.2:2235791-2235810 None:intergenic 30.0%
TTAAATTGAAGAGTAGTTGG+AGG + chr8.2:2234733-2234752 MS.gene042192:intron 30.0%
! TAAGCCTTATGTGAAGAAAA+TGG + chr8.2:2235880-2235899 MS.gene042192:CDS 30.0%
!! AAAAAGAGGAAAGCTTTGTT+TGG - chr8.2:2234010-2234029 None:intergenic 30.0%
!! TTTCTTACAAAACTGACTTG+TGG + chr8.2:2235529-2235548 MS.gene042192:intron 30.0%
!!! AATAATTTTTTGCAGCTAGG+AGG + chr8.2:2234884-2234903 MS.gene042192:intron 30.0%
!!! TGGAATAATTTTTTGCAGCT+AGG + chr8.2:2234881-2234900 MS.gene042192:intron 30.0%
AATCCTCTTACTGGCATAAA+GGG + chr8.2:2235965-2235984 MS.gene042192:CDS 35.0%
ACTCCTTGAAGAAATACTCT+TGG - chr8.2:2235913-2235932 None:intergenic 35.0%
AGGACAAAAGAGCTAAAAAG+AGG - chr8.2:2234024-2234043 None:intergenic 35.0%
AGTTAAATGTGGTATACACG+TGG - chr8.2:2235353-2235372 None:intergenic 35.0%
CAGAAATATCTTGGACAACA+AGG + chr8.2:2235814-2235833 MS.gene042192:CDS 35.0%
GAAACAATCAAGAAGAGTTG+TGG - chr8.2:2234052-2234071 None:intergenic 35.0%
GACGGATCTAAACTACAATT+TGG - chr8.2:2235286-2235305 None:intergenic 35.0%
GTCAGAAACAAAACAAAGAG+AGG - chr8.2:2234537-2234556 None:intergenic 35.0%
TAGAACCCATTGTACAAAGT+TGG + chr8.2:2235637-2235656 MS.gene042192:CDS 35.0%
TATCTATCTGATGAGTCATG+AGG - chr8.2:2235208-2235227 None:intergenic 35.0%
TCAGAAAACAATCCTCTTAC+TGG + chr8.2:2235956-2235975 MS.gene042192:CDS 35.0%
TCTGCTGTTCTTGACAAATT+TGG + chr8.2:2235001-2235020 MS.gene042192:CDS 35.0%
TCTTTCAACAGCTTCTTTGA+TGG - chr8.2:2234439-2234458 None:intergenic 35.0%
TGGCAATTGAAATTGTCTGA+TGG - chr8.2:2235431-2235450 None:intergenic 35.0%
TTAGAATCTGATGACTCATG+AGG - chr8.2:2235254-2235273 None:intergenic 35.0%
TTTGTCAAGAACAGCAGAAA+TGG - chr8.2:2234999-2235018 None:intergenic 35.0%
! CCATATATTCCTCTGAAAAC+AGG + chr8.2:2234908-2234927 MS.gene042192:CDS 35.0%
! CCTGTTTTCAGAGGAATATA+TGG - chr8.2:2234911-2234930 None:intergenic 35.0%
! GTCATGCTATTTATGTACAG+TGG + chr8.2:2234252-2234271 MS.gene042192:intron 35.0%
! TTGAAATTGTCTGATGGATC+TGG - chr8.2:2235425-2235444 None:intergenic 35.0%
! TTGATGATTTCTTCAGCTTG+AGG - chr8.2:2234127-2234146 None:intergenic 35.0%
!! GCTCTAAGATCAATTTGTGT+TGG + chr8.2:2234861-2234880 MS.gene042192:intron 35.0%
!! TTGGCCATTTTCTTCACATA+AGG - chr8.2:2235887-2235906 None:intergenic 35.0%
!!! GCTTTGGTTTGAGGAATTTT+AGG + chr8.2:2234403-2234422 MS.gene042192:CDS 35.0%
AAAGAGTAGAGTGGATCTGT+TGG + chr8.2:2234946-2234965 MS.gene042192:CDS 40.0%
ACAAGAACACTGCTTTCTCT+TGG + chr8.2:2234176-2234195 MS.gene042192:CDS 40.0%
CAAGAAGAGTTGTGGAGAAA+AGG - chr8.2:2234044-2234063 None:intergenic 40.0%
CAATCCTCTTACTGGCATAA+AGG + chr8.2:2235964-2235983 MS.gene042192:CDS 40.0%
CTTGTTCTTTCTGCTAGAGA+CGG + chr8.2:2234492-2234511 MS.gene042192:CDS 40.0%
GCAGCAAACTAAATGACCAT+TGG - chr8.2:2235385-2235404 None:intergenic 40.0%
GTGCACCAACTTTGTACAAT+GGG - chr8.2:2235645-2235664 None:intergenic 40.0%
GTTCAAAGCTGGATCAACTT+CGG - chr8.2:2235678-2235697 None:intergenic 40.0%
TCGTGCAACTATATGAGTGT+TGG - chr8.2:2235451-2235470 None:intergenic 40.0%
TCTTCTGCAGCAGAAGATAA+TGG + chr8.2:2234070-2234089 MS.gene042192:CDS 40.0%
TGTAGTTTAGATCCGTCGTA+CGG + chr8.2:2235289-2235308 MS.gene042192:intron 40.0%
TTACCTGAACAGCACAATCA+TGG - chr8.2:2234216-2234235 None:intergenic 40.0%
TTCAAAGCTGGATCAACTTC+GGG - chr8.2:2235677-2235696 None:intergenic 40.0%
! GAAGAAATACTCTTGGCTCT+TGG - chr8.2:2235906-2235925 None:intergenic 40.0%
! TCCTCTGAAAACAGGAAGAA+GGG + chr8.2:2234916-2234935 MS.gene042192:CDS 40.0%
! TTCCTCTGAAAACAGGAAGA+AGG + chr8.2:2234915-2234934 MS.gene042192:CDS 40.0%
! TTTCCATGATTGTGCTGTTC+AGG + chr8.2:2234210-2234229 MS.gene042192:CDS 40.0%
!! CAACAAGGGTCTTTTGATTG+TGG + chr8.2:2235829-2235848 MS.gene042192:CDS 40.0%
!! CTTGACAAATTTGGTGCCAT+GGG + chr8.2:2235010-2235029 MS.gene042192:CDS 40.0%
!! GAGCCAAGAGTATTTCTTCA+AGG + chr8.2:2235907-2235926 MS.gene042192:CDS 40.0%
!! TCTTGACAAATTTGGTGCCA+TGG + chr8.2:2235009-2235028 MS.gene042192:CDS 40.0%
!! TTTTAAGGACAAGGTTGTGC+AGG + chr8.2:2234605-2234624 MS.gene042192:intron 40.0%
AGCATGTGTGGAATGTGTTC+TGG - chr8.2:2235701-2235720 None:intergenic 45.0%
CAAGAACACGACAGAAGCTT+TGG + chr8.2:2234387-2234406 MS.gene042192:CDS 45.0%
CTCAGACAAGCTTCTTCTTG+TGG - chr8.2:2234367-2234386 None:intergenic 45.0%
CTGAAAACAGGAAGAAGGGA+TGG + chr8.2:2234920-2234939 MS.gene042192:CDS 45.0%
CTGATGAGTCATGAGGATTG+AGG - chr8.2:2235201-2235220 None:intergenic 45.0%
GATCAACTTCGGGGTACAAA+CGG - chr8.2:2235667-2235686 None:intergenic 45.0%
GATCTGGATCCCTTACTGTA+CGG - chr8.2:2235409-2235428 None:intergenic 45.0%
GCATGTGTGGAATGTGTTCT+GGG - chr8.2:2235700-2235719 None:intergenic 45.0%
GGATGGTAGAAAGAGTAGAG+TGG + chr8.2:2234937-2234956 MS.gene042192:CDS 45.0%
GGATTCAGATCCAGATCCAA+AGG - chr8.2:2235332-2235351 None:intergenic 45.0%
GGTGCACCAACTTTGTACAA+TGG - chr8.2:2235646-2235665 None:intergenic 45.0%
TCAAAGCTGGATCAACTTCG+GGG - chr8.2:2235676-2235695 None:intergenic 45.0%
TCACCCTTTATGCCAGTAAG+AGG - chr8.2:2235971-2235990 None:intergenic 45.0%
TCAGAACAGGAAACAACTCC+AGG - chr8.2:2234468-2234487 None:intergenic 45.0%
TCTGATGACTCATGAGGTTG+AGG - chr8.2:2235248-2235267 None:intergenic 45.0%
TGCTAGAGACGGCATTGTTT+CGG + chr8.2:2234503-2234522 MS.gene042192:CDS 45.0%
TTTGCTGCACCGTACAGTAA+GGG + chr8.2:2235397-2235416 MS.gene042192:intron 45.0%
! ATGTGTTCTGGGTTCAAAGC+TGG - chr8.2:2235689-2235708 None:intergenic 45.0%
! CAGCAGAAATGGACTCATTG+TGG - chr8.2:2234988-2235007 None:intergenic 45.0%
! GAAATGGACTCATTGTGGTC+AGG - chr8.2:2234983-2235002 None:intergenic 45.0%
! TCCCTTCTTCCTGTTTTCAG+AGG - chr8.2:2234920-2234939 None:intergenic 45.0%
!! ACGACAGAAGCTTTGGTTTG+AGG + chr8.2:2234394-2234413 MS.gene042192:CDS 45.0%
!!! ATATATTTATTTTATATGTA+AGG + chr8.2:2234839-2234858 MS.gene042192:intron 5.0%
!!! ATTTATTTTAAAAAAAAGTT+CGG - chr8.2:2234800-2234819 None:intergenic 5.0%
ACTCGAATGGCCTTTGGATC+TGG + chr8.2:2235319-2235338 MS.gene042192:intron 50.0%
AGGTTGAGGACCCCACAATT+TGG - chr8.2:2235234-2235253 None:intergenic 50.0%
CCAAGCAAAGCAACAACTCC+AGG - chr8.2:2235046-2235065 None:intergenic 50.0%
GAGTAGAGTGGATCTGTTGG+AGG + chr8.2:2234949-2234968 MS.gene042192:CDS 50.0%
GCAACAACTCGAATGGCCTT+TGG + chr8.2:2235313-2235332 MS.gene042192:intron 50.0%
GGGCACTTCTTAAGCATGTG+TGG - chr8.2:2235713-2235732 None:intergenic 50.0%
GTACGGTGCAACAACTCGAA+TGG + chr8.2:2235306-2235325 MS.gene042192:intron 50.0%
GTCGTTTCTCACGTACTGCA+CGG - chr8.2:2235759-2235778 None:intergenic 50.0%
TAGGGTCGGGGATTGAATCA+GGG - chr8.2:2235733-2235752 None:intergenic 50.0%
TGATTCAATCCCCGACCCTA+AGG + chr8.2:2235733-2235752 MS.gene042192:CDS 50.0%
TGGACTCATTGTGGTCAGGA+AGG - chr8.2:2234979-2234998 None:intergenic 50.0%
TTAGGGTCGGGGATTGAATC+AGG - chr8.2:2235734-2235753 None:intergenic 50.0%
! GTTTGCTGCACCGTACAGTA+AGG + chr8.2:2235396-2235415 MS.gene042192:intron 50.0%
! TGAACAGGAGCACACAGTGT+TGG + chr8.2:2235614-2235633 MS.gene042192:intron 50.0%
!! CAAAACTGACTTGTGGAGCG+TGG + chr8.2:2235536-2235555 MS.gene042192:intron 50.0%
!! CCTGGAGTTGTTGCTTTGCT+TGG + chr8.2:2235043-2235062 MS.gene042192:CDS 50.0%
!! CTCTTCATGGTGCTGCTTGT+TGG - chr8.2:2236017-2236036 None:intergenic 50.0%
!! GCTGTTGAAAGAGAGTGTCC+TGG + chr8.2:2234447-2234466 MS.gene042192:CDS 50.0%
!! TCCAGGAGTGTCAATTCCCA+TGG - chr8.2:2235029-2235048 None:intergenic 50.0%
CAGTACGTGAGAAACGACCG+TGG + chr8.2:2235761-2235780 MS.gene042192:CDS 55.0%
CCAGAATCATCGGTGTGCCA+CGG - chr8.2:2235781-2235800 None:intergenic 55.0%
CGAGTTGTTGCACCGTACGA+CGG - chr8.2:2235304-2235323 None:intergenic 55.0%
GCCATGGGAATTGACACTCC+TGG + chr8.2:2235025-2235044 MS.gene042192:CDS 55.0%
TCACGTACTGCACGGCCTTA+GGG - chr8.2:2235751-2235770 None:intergenic 55.0%
CCGTGGCACACCGATGATTC+TGG + chr8.2:2235778-2235797 MS.gene042192:CDS 60.0%
CTCACGTACTGCACGGCCTT+AGG - chr8.2:2235752-2235771 None:intergenic 60.0%
GTACTGCACGGCCTTAGGGT+CGG - chr8.2:2235747-2235766 None:intergenic 60.0%
TACTGCACGGCCTTAGGGTC+GGG - chr8.2:2235746-2235765 None:intergenic 60.0%
ACTGCACGGCCTTAGGGTCG+GGG - chr8.2:2235745-2235764 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 2234001 2236042 2234001 ID=MS.gene042192
chr8.2 mRNA 2234001 2236042 2234001 ID=MS.gene042192.t1;Parent=MS.gene042192
chr8.2 exon 2234001 2234231 2234001 ID=MS.gene042192.t1.exon1;Parent=MS.gene042192.t1
chr8.2 CDS 2234001 2234231 2234001 ID=cds.MS.gene042192.t1;Parent=MS.gene042192.t1
chr8.2 exon 2234336 2234524 2234336 ID=MS.gene042192.t1.exon2;Parent=MS.gene042192.t1
chr8.2 CDS 2234336 2234524 2234336 ID=cds.MS.gene042192.t1;Parent=MS.gene042192.t1
chr8.2 exon 2234899 2235064 2234899 ID=MS.gene042192.t1.exon3;Parent=MS.gene042192.t1
chr8.2 CDS 2234899 2235064 2234899 ID=cds.MS.gene042192.t1;Parent=MS.gene042192.t1
chr8.2 exon 2235621 2236042 2235621 ID=MS.gene042192.t1.exon4;Parent=MS.gene042192.t1
chr8.2 CDS 2235621 2236042 2235621 ID=cds.MS.gene042192.t1;Parent=MS.gene042192.t1
Gene Sequence

>MS.gene042192

ATGTCTCCAAACAAAGCTTTCCTCTTTTTAGCTCTTTTGTCCTTTTCTCCACAACTCTTCTTGATTGTTTCTTCTGCAGCAGAAGATAATGGCCTTGTTATGAATTACTACAAAGAAGCATGTCCTCAAGCTGAAGAAATCATCAAAGAACAAGTCAAACTTCTTTACAAACGTCACAAGAACACTGCTTTCTCTTGGCTCAGAAACATTTTCCATGATTGTGCTGTTCAGGTAACTATATCTTTCTTTATGTCATGCTATTTATGTACAGTGGTTTTCTTTTTTGTTTTTCTTAAAAGTTTTTTTTCTTTCTCACTTGTGATTTTGTGTTATAGAGTTGTGATGCTTCTTTGTTGCTGACATCCACAAGAAGAAGCTTGTCTGAGCAAGAACACGACAGAAGCTTTGGTTTGAGGAATTTTAGGTACATTGATACCATCAAAGAAGCTGTTGAAAGAGAGTGTCCTGGAGTTGTTTCCTGTTCTGATATTCTTGTTCTTTCTGCTAGAGACGGCATTGTTTCGGTATAATTTCCTCTCTTTGTTTTGTTTCTGACTTTGTTTATCTTCATCTGATGTATGCTTTTTAAAGAAAAAACATGTTTTTTTAAGGACAAGGTTGTGCAGGTACTAATTATGTGCATGTATCAAATTGAGTTATACAAGGACAAATTATTGTACATAAAACCAATACACAAAACTGTTAATTTTGCTATGTTATTTTTGCCTATTATTAAATTGAAGAGTAGTTGGAGGCTTAGATCTAGTCCAGATTTGCTTTGACTTTTGTTTGAAGACCGAACTTTTTTTTAAAATAAATTATAGTAATAGTTTAATTTATATATTTATTTTATATGTAAGGCTCTAAGATCAATTTGTGTTGGAATAATTTTTTGCAGCTAGGAGGTCCATATATTCCTCTGAAAACAGGAAGAAGGGATGGTAGAAAGAGTAGAGTGGATCTGTTGGAGGAGTACCTTCCTGACCACAATGAGTCCATTTCTGCTGTTCTTGACAAATTTGGTGCCATGGGAATTGACACTCCTGGAGTTGTTGCTTTGCTTGGTATAATACCATACTAATTAAACACCTTCTTCATTAATTAATTAATTCATAAACATGATGATATATATGTTCTCATTTTATTAAAATGGAAATCTTCATTTTTACATCATATCTAATCAAAATAATGTGATGTCCTCAATCCTCATGACTCATCAGATAGATAAATCCAAATTGTGGGGTCCTCAACCTCATGAGTCATCAGATTCTAATAGATAAAGCCAAATTGTAGTTTAGATCCGTCGTACGGTGCAACAACTCGAATGGCCTTTGGATCTGGATCTGAATCCACGTGTATACCACATTTAACTCATTTAGATCCAATGGTCATTTAGTTTGCTGCACCGTACAGTAAGGGATCCAGATCCATCAGACAATTTCAATTGCCAACACTCATATAGTTGCACGACACAATTATAAGATTGAAGTGCTTTATTATTGTTAGAATTTGCGTTGAACTTAACTCATTTCTTACAAAACTGACTTGTGGAGCGTGGACTATCCATACCGTAATATATATCATTTAATGTGCGACATTAACAATTATTTTGTTGAACAGGAGCACACAGTGTTGGTAGAACCCATTGTACAAAGTTGGTGCACCGTTTGTACCCCGAAGTTGATCCAGCTTTGAACCCAGAACACATTCCACACATGCTTAAGAAGTGCCCTGATTCAATCCCCGACCCTAAGGCCGTGCAGTACGTGAGAAACGACCGTGGCACACCGATGATTCTGGATAACAACTATTACAGAAATATCTTGGACAACAAGGGTCTTTTGATTGTGGATCATCAATTAGCACATGACAAAAGGACTAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAAGAGTATTTCTTCAAGGAGTTTTCTAGAGCTATTACATTGCTTTCAGAAAACAATCCTCTTACTGGCATAAAGGGTGAGATCAGAAAGCAATGCAGTGTTGCCAACAAGCAGCACCATGAAGAGCCTTGA
Protein sequence

>MS.gene042192.t1

MSPNKAFLFLALLSFSPQLFLIVSSAAEDNGLVMNYYKEACPQAEEIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLTSTRRSLSEQEHDRSFGLRNFRYIDTIKEAVERECPGVVSCSDILVLSARDGIVSLGGPYIPLKTGRRDGRKSRVDLLEEYLPDHNESISAVLDKFGAMGIDTPGVVALLGAHSVGRTHCTKLVHRLYPEVDPALNPEHIPHMLKKCPDSIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLAHDKRTKPYVKKMAKSQEYFFKEFSRAITLLSENNPLTGIKGEIRKQCSVANKQHHEEP