AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060053

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060053.t1 MTR_7g029030 96.250 320 12 0 1 320 1 320 0.0 637
MS.gene060053.t1 MTR_5g016010 57.975 326 128 4 1 317 1 326 1.53e-130 375
MS.gene060053.t1 MTR_4g095450 59.810 316 122 4 6 317 7 321 1.70e-130 375
MS.gene060053.t1 MTR_4g127670 58.086 303 119 3 24 320 23 323 9.79e-122 352
MS.gene060053.t1 MTR_1g009750 54.969 322 138 3 6 320 7 328 3.73e-121 351
MS.gene060053.t1 MTR_1g009750 50.938 320 137 4 6 320 7 311 5.27e-107 315
MS.gene060053.t1 MTR_4g087965 48.113 318 152 5 11 317 28 343 3.32e-93 281
MS.gene060053.t1 MTR_0286s0010 43.438 320 173 5 6 320 18 334 1.90e-90 273
MS.gene060053.t1 MTR_6g008075 43.438 320 173 5 6 320 18 334 1.90e-90 273
MS.gene060053.t1 MTR_8g062780 44.688 320 169 4 7 320 7 324 2.85e-90 273
MS.gene060053.t1 MTR_3g094650 43.574 319 173 4 5 320 8 322 2.19e-86 262
MS.gene060053.t1 MTR_1g090760 41.615 322 179 4 6 320 11 330 6.79e-86 261
MS.gene060053.t1 MTR_5g022870 43.034 323 169 9 4 320 3 316 5.39e-83 253
MS.gene060053.t1 MTR_3g105790 39.877 326 186 2 1 320 1 322 6.46e-82 251
MS.gene060053.t1 MTR_3g072190 40.994 322 184 4 1 320 1 318 1.84e-80 247
MS.gene060053.t1 MTR_1g025980 43.849 317 165 7 6 316 5 314 2.05e-80 247
MS.gene060053.t1 MTR_8g075100 45.364 302 151 8 25 320 26 319 7.68e-80 246
MS.gene060053.t1 MTR_3g094670 43.574 319 173 4 5 320 8 322 5.92e-79 243
MS.gene060053.t1 MTR_7g107520 41.975 324 177 6 3 320 2 320 1.40e-78 242
MS.gene060053.t1 MTR_3g466200 42.500 320 170 6 8 320 8 320 2.11e-78 242
MS.gene060053.t1 MTR_2g088770 40.439 319 181 5 8 320 10 325 3.05e-78 242
MS.gene060053.t1 MTR_5g083860 41.875 320 177 5 4 320 12 325 5.19e-78 241
MS.gene060053.t1 MTR_5g074970 42.812 320 172 6 7 320 12 326 5.71e-78 241
MS.gene060053.t1 MTR_4g125940 42.368 321 175 4 8 320 11 329 1.35e-77 240
MS.gene060053.t1 MTR_4g046713 41.456 316 177 4 11 320 13 326 2.84e-77 239
MS.gene060053.t1 MTR_3g092990 41.104 326 182 6 2 320 4 326 3.59e-77 239
MS.gene060053.t1 MTR_1g038680 43.421 304 156 7 29 320 33 332 5.36e-77 239
MS.gene060053.t1 MTR_2g008710 40.854 328 175 8 4 320 6 325 8.39e-77 238
MS.gene060053.t1 MTR_7g086820 42.373 295 161 5 29 320 24 312 8.66e-77 238
MS.gene060053.t1 MTR_1g101830 42.006 319 173 7 8 320 10 322 1.60e-76 237
MS.gene060053.t1 MTR_2g029815 45.697 337 159 13 1 320 1 330 4.71e-76 237
MS.gene060053.t1 MTR_3g094630 42.320 319 177 4 5 320 8 322 1.19e-75 235
MS.gene060053.t1 MTR_1g054205 40.248 323 180 6 6 320 9 326 2.29e-75 234
MS.gene060053.t1 MTR_2g084090 39.441 322 189 4 1 320 1 318 4.24e-75 233
MS.gene060053.t1 MTR_7g086870 42.333 300 163 6 23 320 20 311 4.84e-75 233
MS.gene060053.t1 MTR_2g084080 39.812 319 183 4 7 320 3 317 7.15e-75 233
MS.gene060053.t1 MTR_7g093370 41.195 318 176 6 12 320 56 371 7.19e-75 234
MS.gene060053.t1 MTR_6g027440 41.640 317 177 5 7 320 3 314 1.73e-74 232
MS.gene060053.t1 MTR_4g029170 40.881 318 180 6 6 320 9 321 1.90e-74 232
MS.gene060053.t1 MTR_4g029200 40.850 306 174 4 17 320 38 338 1.94e-74 233
MS.gene060053.t1 MTR_2g029830 42.444 311 165 5 20 320 23 329 6.78e-74 231
MS.gene060053.t1 MTR_2g029800 42.857 308 168 5 20 320 24 330 2.22e-73 230
MS.gene060053.t1 MTR_4g114210 40.123 324 180 5 6 320 2 320 2.49e-73 229
MS.gene060053.t1 MTR_2g084110 38.629 321 192 3 1 320 1 317 4.51e-73 228
MS.gene060053.t1 MTR_2g029750 43.871 310 162 8 20 320 24 330 1.20e-72 228
MS.gene060053.t1 MTR_2g040000 39.329 328 185 5 5 320 6 331 1.35e-72 228
MS.gene060053.t1 MTR_4g083710 39.688 320 184 6 7 320 8 324 1.91e-72 227
MS.gene060053.t1 MTR_2g029820 41.088 331 183 5 1 320 1 330 2.22e-72 228
MS.gene060053.t1 MTR_5g017860 41.368 307 164 6 24 320 26 326 3.12e-72 226
MS.gene060053.t1 MTR_2g028980 42.073 328 168 7 4 320 14 330 3.41e-72 227
MS.gene060053.t1 MTR_1g086320 39.692 325 180 7 8 320 13 333 5.90e-72 226
MS.gene060053.t1 MTR_5g017850 38.720 328 184 6 2 320 7 326 6.93e-72 225
MS.gene060053.t1 MTR_4g029180 41.216 296 167 5 28 320 30 321 8.91e-72 225
MS.gene060053.t1 MTR_7g072510 38.801 317 183 5 7 320 4 312 1.75e-71 224
MS.gene060053.t1 MTR_1g077000 37.994 329 187 7 1 320 7 327 2.08e-71 224
MS.gene060053.t1 MTR_5g021060 42.384 302 167 4 25 320 30 330 3.38e-71 224
MS.gene060053.t1 MTR_2g084010 38.509 322 192 4 1 320 1 318 3.40e-71 223
MS.gene060053.t1 MTR_2g029730 41.337 329 181 5 1 320 1 326 3.88e-71 224
MS.gene060053.t1 MTR_3g467600 41.284 327 180 8 1 320 3 324 8.92e-71 223
MS.gene060053.t1 MTR_2g084020 38.509 322 192 4 1 320 1 318 8.98e-71 222
MS.gene060053.t1 MTR_2g029560 40.373 322 180 5 6 320 9 325 1.80e-70 223
MS.gene060053.t1 MTR_2g029860 41.100 309 168 4 22 320 26 330 3.87e-70 222
MS.gene060053.t1 MTR_0155s0040 38.924 316 184 6 6 320 8 315 9.24e-70 219
MS.gene060053.t1 MTR_2g029850 41.042 307 175 3 20 320 24 330 1.13e-69 221
MS.gene060053.t1 MTR_7g072480 38.608 316 189 3 6 320 5 316 2.46e-69 219
MS.gene060053.t1 MTR_6g043460 38.006 321 186 5 5 316 8 324 3.06e-69 219
MS.gene060053.t1 MTR_4g030890 38.961 308 179 5 18 320 93 396 5.81e-69 221
MS.gene060053.t1 MTR_4g031140 38.750 320 185 6 6 320 11 324 7.22e-69 218
MS.gene060053.t1 MTR_4g125940 45.055 273 140 4 56 320 4 274 1.02e-68 216
MS.gene060053.t1 MTR_4g029190 39.159 309 178 6 17 320 37 340 1.36e-68 218
MS.gene060053.t1 MTR_2g029740 40.663 332 183 8 1 320 1 330 1.39e-68 218
MS.gene060053.t1 MTR_5g074860 39.752 322 182 8 3 318 8 323 1.97e-68 216
MS.gene060053.t1 MTR_2g084000 37.618 319 191 5 6 320 5 319 2.51e-68 216
MS.gene060053.t1 MTR_3g092990 39.939 328 172 8 2 320 4 315 1.70e-67 214
MS.gene060053.t1 MTR_1g086490 38.602 329 179 7 11 320 16 340 2.11e-67 214
MS.gene060053.t1 MTR_3g466180 39.048 315 187 3 7 320 13 323 3.17e-67 213
MS.gene060053.t1 MTR_4g074995 39.815 324 163 8 13 320 1 308 1.12e-65 209
MS.gene060053.t1 MTR_1g066710 39.934 303 177 4 21 320 23 323 2.45e-65 209
MS.gene060053.t1 MTR_8g076820 39.073 302 177 4 25 320 30 330 2.96e-65 209
MS.gene060053.t1 MTR_2g029910 41.214 313 167 8 20 320 25 332 4.53e-65 209
MS.gene060053.t1 MTR_3g072190 42.126 254 142 3 68 320 2 251 6.68e-65 205
MS.gene060053.t1 MTR_6g043280 36.875 320 187 6 10 320 19 332 6.72e-65 208
MS.gene060053.t1 MTR_2g008160 39.228 311 177 5 18 320 17 323 6.79e-65 207
MS.gene060053.t1 MTR_4g122640 39.057 297 176 4 28 320 41 336 7.50e-65 207
MS.gene060053.t1 MTR_5g014100 39.228 311 177 5 21 320 22 331 1.02e-64 207
MS.gene060053.t1 MTR_7g026990 36.392 316 193 6 8 320 12 322 1.75e-64 206
MS.gene060053.t1 MTR_4g074990 37.618 319 174 6 9 320 5 305 5.08e-64 204
MS.gene060053.t1 MTR_5g074760 39.938 323 182 9 5 320 4 321 1.12e-63 204
MS.gene060053.t1 MTR_6g043240 39.527 296 173 4 25 320 42 331 2.70e-63 204
MS.gene060053.t1 MTR_1g115900 37.538 325 192 8 1 320 3 321 1.38e-62 202
MS.gene060053.t1 MTR_5g074740 39.009 323 185 9 5 320 4 321 2.13e-62 201
MS.gene060053.t1 MTR_2g029830 43.678 261 133 5 70 320 5 261 3.10e-62 199
MS.gene060053.t1 MTR_1g066640 38.816 304 179 5 21 320 23 323 4.25e-62 200
MS.gene060053.t1 MTR_2g008730 37.117 326 166 8 4 320 6 301 7.32e-62 199
MS.gene060053.t1 MTR_3g105790 43.882 237 123 2 94 320 10 246 8.43e-62 197
MS.gene060053.t1 MTR_4g132490 34.483 319 201 4 6 320 13 327 1.10e-61 199
MS.gene060053.t1 MTR_5g074710 37.846 325 190 9 2 320 3 321 1.30e-60 196
MS.gene060053.t1 MTR_1g066380 37.500 304 183 5 21 320 23 323 3.80e-60 195
MS.gene060053.t1 MTR_2g099175 33.431 341 200 7 1 320 1 335 4.26e-59 193
MS.gene060053.t1 MTR_2g067440 34.756 328 178 4 25 318 60 385 9.34e-59 194
MS.gene060053.t1 MTR_1g022970 36.893 309 175 4 25 320 46 347 1.60e-58 192
MS.gene060053.t1 MTR_4g132110 35.185 324 197 7 7 320 8 328 4.73e-58 190
MS.gene060053.t1 MTR_1g066680 38.158 304 180 6 21 320 23 322 5.05e-58 190
MS.gene060053.t1 MTR_4g133800 38.721 297 167 6 30 320 46 333 9.50e-57 187
MS.gene060053.t1 MTR_4g132110 34.650 329 197 9 7 320 8 333 2.50e-56 186
MS.gene060053.t1 MTR_4g074980 36.741 313 168 7 9 320 11 294 5.08e-56 184
MS.gene060053.t1 MTR_2g077990 35.045 331 176 5 25 318 76 404 1.43e-55 186
MS.gene060053.t1 MTR_2g078610 34.441 331 178 5 25 318 76 404 2.01e-55 185
MS.gene060053.t1 MTR_5g049280 33.934 333 200 9 5 320 8 337 1.00e-54 182
MS.gene060053.t1 MTR_4g074980 40.726 248 138 5 9 252 11 253 5.26e-54 177
MS.gene060053.t1 MTR_2g008160 36.039 308 156 5 18 320 17 288 4.74e-53 176
MS.gene060053.t1 MTR_5g033470 38.141 312 176 11 22 320 70 377 3.86e-52 176
MS.gene060053.t1 MTR_2g437770 35.570 298 178 6 28 320 53 341 1.36e-51 174
MS.gene060053.t1 MTR_2g078280 34.483 319 170 5 25 306 76 392 4.28e-50 171
MS.gene060053.t1 MTR_2g067450 36.656 311 167 11 25 318 11 308 9.44e-48 163
MS.gene060053.t1 MTR_1g066380 37.891 256 152 5 69 320 3 255 9.79e-48 161
MS.gene060053.t1 MTR_0147s0010 33.019 318 175 6 25 318 77 380 3.52e-45 158
MS.gene060053.t1 MTR_5g074860 33.540 322 163 8 3 318 8 284 2.03e-44 153
MS.gene060053.t1 MTR_3g072210 41.489 188 105 3 135 320 54 238 8.35e-43 147
MS.gene060053.t1 MTR_2g029880 42.632 190 93 5 137 320 9 188 1.12e-39 139
MS.gene060053.t1 MTR_5g074700 38.667 225 117 7 100 320 7 214 6.00e-38 134
MS.gene060053.t1 MTR_2g008160 40.331 181 104 3 18 198 17 193 6.38e-37 131
MS.gene060053.t1 MTR_7g086790 39.247 186 93 5 72 256 17 183 7.60e-32 118
MS.gene060053.t1 MTR_7g072490 32.787 244 105 6 71 313 2 187 1.99e-25 101
MS.gene060053.t1 MTR_5g058120 33.125 160 100 2 157 316 3 155 4.76e-23 96.3
MS.gene060053.t1 MTR_2g077980 29.965 287 153 12 77 319 1 283 6.41e-23 96.7
MS.gene060053.t1 MTR_3g072260 39.844 128 73 3 8 132 7 133 7.08e-23 92.8
MS.gene060053.t1 MTR_2g078560 28.311 219 122 4 136 319 101 319 1.39e-21 93.6
MS.gene060053.t1 MTR_4g031040 37.815 119 61 2 136 254 26 131 6.83e-20 84.7
MS.gene060053.t1 MTR_3g107060 26.692 266 149 6 45 305 92 316 8.85e-18 82.8
MS.gene060053.t1 MTR_5g022510 27.698 278 161 7 26 303 6 243 1.45e-17 81.6
MS.gene060053.t1 MTR_4g114220 42.222 90 42 2 45 134 23 102 1.24e-16 75.9
MS.gene060053.t1 MTR_1g098320 46.053 76 41 0 242 317 46 121 1.43e-16 75.9
MS.gene060053.t1 MTR_5g022510 28.139 231 133 5 73 303 21 218 6.40e-16 76.6
MS.gene060053.t1 MTR_6g048160 52.778 72 30 2 64 135 22 89 3.56e-15 70.5
MS.gene060053.t1 MTR_7g086810 30.769 130 57 2 13 142 1 97 6.99e-15 73.2
MS.gene060053.t1 MTR_1g089005 36.220 127 71 3 11 130 2 125 1.44e-14 70.5
MS.gene060053.t1 MTR_4g073410 28.000 250 133 8 60 303 36 244 4.69e-14 71.6
MS.gene060053.t1 MTR_7g107500 42.683 82 46 1 239 320 17 97 2.70e-13 65.5
MS.gene060053.t1 MTR_3g462850 31.884 138 83 5 189 316 9 145 1.58e-12 64.7
MS.gene060053.t1 MTR_7g086785 41.026 78 39 2 68 142 1 74 1.97e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060053.t1 AT5G14130 59.443 323 126 2 2 320 9 330 3.13e-138 395
MS.gene060053.t1 AT5G14130 59.813 321 123 3 4 320 53 371 7.27e-138 395
MS.gene060053.t1 AT4G37530 60.000 310 117 3 18 320 20 329 2.90e-130 374
MS.gene060053.t1 AT4G30170 58.882 304 116 3 23 320 25 325 2.70e-126 364
MS.gene060053.t1 AT4G37520 59.016 305 118 3 23 320 25 329 3.20e-125 362
MS.gene060053.t1 AT2G18980 56.918 318 127 4 9 320 10 323 6.62e-123 355
MS.gene060053.t1 AT4G37520 58.689 305 116 4 23 320 25 326 4.39e-122 353
MS.gene060053.t1 AT5G67400 54.489 323 139 4 6 320 7 329 1.84e-119 347
MS.gene060053.t1 AT3G49960 56.393 305 126 3 23 320 25 329 2.73e-117 341
MS.gene060053.t1 AT4G37530 60.920 261 95 3 18 271 20 280 2.43e-110 322
MS.gene060053.t1 AT5G47000 47.319 317 165 2 6 320 14 330 2.73e-101 301
MS.gene060053.t1 AT4G17690 48.377 308 154 4 16 320 17 322 7.27e-99 295
MS.gene060053.t1 AT5G40150 46.580 307 153 4 20 320 27 328 6.44e-92 277
MS.gene060053.t1 AT2G34060 44.590 305 160 4 24 319 41 345 1.38e-88 269
MS.gene060053.t1 AT1G24110 44.079 304 165 4 22 320 19 322 3.64e-88 267
MS.gene060053.t1 AT1G05260 42.593 324 175 5 6 320 4 325 4.76e-85 259
MS.gene060053.t1 AT3G28200 42.951 305 166 4 20 320 16 316 5.99e-85 259
MS.gene060053.t1 AT3G21770 42.345 307 169 4 17 317 21 325 7.12e-81 249
MS.gene060053.t1 AT5G05340 43.234 303 163 5 22 320 27 324 5.14e-79 244
MS.gene060053.t1 AT3G01190 41.304 322 177 6 5 320 6 321 8.33e-79 243
MS.gene060053.t1 AT4G31760 41.066 319 178 3 8 320 12 326 1.65e-78 243
MS.gene060053.t1 AT5G51890 41.587 315 171 7 6 313 7 315 1.79e-78 242
MS.gene060053.t1 AT5G64120 43.390 295 159 4 29 320 39 328 2.92e-78 242
MS.gene060053.t1 AT1G14540 39.873 316 185 4 7 320 3 315 3.30e-78 241
MS.gene060053.t1 AT5G39580 42.633 319 169 7 6 320 11 319 4.50e-77 239
MS.gene060053.t1 AT1G71695 42.953 298 166 4 25 320 44 339 1.03e-76 239
MS.gene060053.t1 AT5G42180 40.764 314 173 7 11 318 9 315 5.88e-76 236
MS.gene060053.t1 AT2G24800 42.623 305 164 5 23 320 29 329 8.27e-76 236
MS.gene060053.t1 AT4G11290 39.024 328 190 5 1 320 1 326 3.33e-75 234
MS.gene060053.t1 AT5G15180 41.414 297 166 4 29 320 36 329 8.47e-75 233
MS.gene060053.t1 AT4G36430 40.789 304 173 4 23 320 28 330 9.91e-75 233
MS.gene060053.t1 AT5G19880 39.634 328 186 5 2 320 5 329 1.21e-74 233
MS.gene060053.t1 AT5G17820 41.325 317 172 6 8 320 7 313 2.28e-74 231
MS.gene060053.t1 AT5G17820 41.325 317 172 6 8 320 60 366 1.75e-73 231
MS.gene060053.t1 AT3G32980 41.100 309 172 5 21 320 27 334 2.16e-73 230
MS.gene060053.t1 AT1G14550 41.231 325 182 7 1 320 1 321 3.10e-73 229
MS.gene060053.t1 AT2G18140 38.602 329 187 5 6 320 8 335 1.06e-72 228
MS.gene060053.t1 AT5G06720 39.117 317 185 5 11 320 18 333 2.45e-72 227
MS.gene060053.t1 AT2G18150 38.182 330 188 5 6 320 8 336 5.29e-72 226
MS.gene060053.t1 AT5G58400 38.532 327 185 6 2 320 7 325 8.84e-72 225
MS.gene060053.t1 AT3G49110 41.558 308 170 5 22 320 30 336 1.21e-71 226
MS.gene060053.t1 AT3G50990 40.260 308 177 4 19 320 35 341 1.43e-71 225
MS.gene060053.t1 AT5G06730 38.801 317 186 4 11 320 19 334 4.41e-71 224
MS.gene060053.t1 AT4G08770 41.026 312 174 5 18 320 17 327 5.65e-71 224
MS.gene060053.t1 AT2G38380 39.564 321 183 7 10 320 14 333 4.73e-70 221
MS.gene060053.t1 AT3G49120 41.368 307 170 5 23 320 30 335 5.54e-70 221
MS.gene060053.t1 AT2G38390 40.000 310 177 6 19 320 25 333 6.26e-70 221
MS.gene060053.t1 AT2G22420 38.318 321 183 8 6 320 8 319 1.38e-69 220
MS.gene060053.t1 AT4G08780 41.667 312 172 6 18 320 17 327 1.73e-69 220
MS.gene060053.t1 AT5G66390 38.629 321 189 5 6 320 15 333 3.73e-69 219
MS.gene060053.t1 AT5G58390 38.650 326 180 7 4 320 2 316 6.39e-69 218
MS.gene060053.t1 AT2G41480 39.755 327 178 7 4 320 11 328 1.43e-68 217
MS.gene060053.t1 AT1G77100 39.498 319 183 6 7 320 6 319 1.57e-68 217
MS.gene060053.t1 AT4G26010 39.490 314 177 7 10 320 6 309 3.01e-68 216
MS.gene060053.t1 AT4G26010 39.490 314 177 7 10 320 34 337 7.02e-68 216
MS.gene060053.t1 AT5G64110 40.468 299 165 5 29 320 38 330 1.29e-67 214
MS.gene060053.t1 AT5G19890 39.937 318 176 7 12 320 16 327 1.52e-67 214
MS.gene060053.t1 AT4G33420 38.462 325 184 8 1 320 12 325 2.23e-67 214
MS.gene060053.t1 AT1G05240 38.562 306 169 6 24 317 24 322 3.33e-67 213
MS.gene060053.t1 AT1G05250 38.562 306 169 6 24 317 24 322 3.33e-67 213
MS.gene060053.t1 AT4G33420 38.462 325 184 8 1 320 59 372 8.57e-67 214
MS.gene060053.t1 AT3G03670 37.695 321 187 5 8 320 6 321 1.40e-66 212
MS.gene060053.t1 AT4G25980 38.226 327 186 7 3 320 7 326 5.35e-66 210
MS.gene060053.t1 AT1G34510 38.562 306 176 6 17 320 14 309 9.96e-65 207
MS.gene060053.t1 AT2G35380 37.725 334 190 6 3 320 4 335 4.07e-63 203
MS.gene060053.t1 AT2G37130 37.864 309 186 5 16 320 21 327 4.61e-63 203
MS.gene060053.t1 AT4G33870 34.473 351 185 7 8 318 54 399 2.96e-62 203
MS.gene060053.t1 AT4G21960 35.423 319 199 5 6 320 12 327 5.52e-62 200
MS.gene060053.t1 AT1G49570 39.731 297 168 6 29 316 52 346 8.79e-62 200
MS.gene060053.t1 AT2G37130 38.047 297 178 5 28 320 2 296 4.14e-61 197
MS.gene060053.t1 AT2G43480 35.714 308 181 6 24 320 34 335 1.63e-60 196
MS.gene060053.t1 AT4G16270 40.000 300 167 8 29 320 54 348 2.10e-60 197
MS.gene060053.t1 AT5G24070 36.129 310 177 7 24 320 34 335 2.02e-59 194
MS.gene060053.t1 AT2G39040 37.942 311 178 7 22 320 43 350 6.86e-59 193
MS.gene060053.t1 AT5G22410 36.478 318 183 9 11 316 11 321 2.89e-58 191
MS.gene060053.t1 AT1G68850 35.119 336 200 10 1 320 2 335 1.57e-56 186
MS.gene060053.t1 AT1G44970 37.294 303 182 4 25 320 45 346 5.07e-56 185
MS.gene060053.t1 AT1G30870 38.333 300 170 6 28 320 54 345 1.18e-53 179
MS.gene060053.t1 AT3G17070 34.936 312 188 8 19 320 33 339 1.53e-52 176
MS.gene060053.t1 AT5G64100 34.783 299 180 6 29 320 41 331 2.14e-52 176
MS.gene060053.t1 AT2G35380 38.618 246 140 3 85 320 3 247 1.36e-46 158
MS.gene060053.t1 AT3G17070 34.164 281 168 9 50 320 3 276 2.54e-41 145
MS.gene060053.t1 AT5G39580 41.753 194 103 5 6 199 11 194 2.20e-40 141
MS.gene060053.t1 AT2G24800 43.713 167 90 3 24 190 30 192 3.69e-36 130
MS.gene060053.t1 AT4G25980 38.095 189 107 5 13 196 55 238 3.99e-31 118
MS.gene060053.t1 AT4G32320 29.348 276 129 10 45 305 101 325 3.13e-17 81.3
MS.gene060053.t1 AT4G35970 28.916 249 131 9 60 303 34 241 1.48e-15 75.9
MS.gene060053.t1 AT3G42570 32.203 118 74 3 79 192 34 149 7.71e-14 68.6
MS.gene060053.t1 AT4G35970 32.168 143 87 5 60 201 34 167 5.90e-11 62.0

Find 64 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATAAGAATAGTATTTA+TGG 0.165591 7.2:+70488279 MS.gene060053:CDS
TGTTTCATGTGCAGACATTT+TGG 0.257385 7.2:+70490602 MS.gene060053:CDS
ATGTTTGGGTCAACATTTCT+AGG 0.278676 7.2:-70491846 None:intergenic
CGTAGAAATTCTCTACTAAT+TGG 0.280392 7.2:-70488342 None:intergenic
AGTATTTATGGCTTTGGTTA+TGG 0.289667 7.2:+70488291 MS.gene060053:CDS
TTGCCCTAACGTTGAACTTT+TGG 0.291803 7.2:+70488372 MS.gene060053:CDS
AAGAATAGTATTTATGGCTT+TGG 0.319041 7.2:+70488285 MS.gene060053:CDS
TTCAGATTGAAAGTTGGTTT+TGG 0.324237 7.2:-70491648 None:intergenic
TGCTTCAACATTTGATGCCT+TGG 0.324633 7.2:-70491619 None:intergenic
AGTATAAACGGTTTGTGAAT+TGG 0.357121 7.2:-70491764 None:intergenic
AAAATTTAGTTAATGGAAAA+GGG 0.365762 7.2:+70491922 MS.gene060053:CDS
TCAAGGGCAAGCACAATGTT+TGG 0.369951 7.2:-70491861 None:intergenic
TTAAGAAGCTTGGAAGAGTT+GGG 0.378933 7.2:+70492051 MS.gene060053:CDS
ATTGCCACTAGAGACGTTAT+AGG 0.387236 7.2:+70490627 MS.gene060053:CDS
CCATCATTCAGCGTTGAACT+TGG 0.406147 7.2:+70491576 MS.gene060053:CDS
GTTATGATTGCTTCACCAAA+TGG 0.413414 7.2:+70490477 MS.gene060053:CDS
CTGGTAAAGAGGGAGAGATT+AGG 0.424247 7.2:+70492081 MS.gene060053:CDS
TATGTTCAGTTTGAGTATCA+AGG 0.429040 7.2:-70491878 None:intergenic
GCCTTCTCCACTAGTTATGA+TGG 0.437798 7.2:-70488320 None:intergenic
ATTAAGAAGCTTGGAAGAGT+TGG 0.444109 7.2:+70492050 MS.gene060053:CDS
CACTAGAGACGTTATAGGCT+TGG 0.445107 7.2:+70490632 MS.gene060053:CDS
TATGCTCAACAATTAATGTC+AGG 0.456860 7.2:+70491819 MS.gene060053:CDS
CAAGGGCAAGCACAATGTTT+GGG 0.460589 7.2:-70491860 None:intergenic
TCTGCACATGAAACAACTCC+TGG 0.462369 7.2:-70490594 None:intergenic
ATTAATTGTTGAGCATAGGT+TGG 0.472311 7.2:-70491813 None:intergenic
GCCACCAAAAGTTCAACGTT+AGG 0.475815 7.2:-70488376 None:intergenic
TTAATTGTTGAGCATAGGTT+GGG 0.481417 7.2:-70491812 None:intergenic
ATCACGAGTGGACCCCACTT+TGG 0.481577 7.2:+70491788 MS.gene060053:CDS
GTTGTGGCTATTAAGAAGCT+TGG 0.487566 7.2:+70492041 MS.gene060053:CDS
AAAGACATGATTGCACTCTC+AGG 0.491221 7.2:+70491711 MS.gene060053:CDS
GTTGTTGAATTTGCTAATGA+TGG 0.496192 7.2:+70491996 MS.gene060053:CDS
AGTTGATTCAGATTGAAAGT+TGG 0.496537 7.2:-70491654 None:intergenic
CCACTCGTGATGAGTATAAA+CGG 0.498218 7.2:-70491776 None:intergenic
CCACCAAAAGTTCAACGTTA+GGG 0.508842 7.2:-70488375 None:intergenic
AATCTTTCCCTACCAGGAGA+TGG 0.510125 7.2:+70490525 MS.gene060053:CDS
CCAAGTTCAACGCTGAATGA+TGG 0.524275 7.2:-70491576 None:intergenic
TGTCAAATCCATCTCCTGGT+AGG 0.544847 7.2:-70490533 None:intergenic
AAGGAAAATCTTTCCCTACC+AGG 0.546274 7.2:+70490519 MS.gene060053:CDS
ACCATCATAACTAGTGGAGA+AGG 0.549367 7.2:+70488319 MS.gene060053:CDS
GCAGTGGAAGCTGTTTGCCC+AGG 0.549442 7.2:+70490576 MS.gene060053:CDS
ACAGTGTCAAATCCATCTCC+TGG 0.549652 7.2:-70490537 None:intergenic
TGTTTGGGTCAACATTTCTA+GGG 0.551420 7.2:-70491845 None:intergenic
TTTGCATGATTGCTTTGTTG+AGG 0.551879 7.2:+70488462 MS.gene060053:CDS
ATGTTCAGTTTGAGTATCAA+GGG 0.552125 7.2:-70491877 None:intergenic
TGATGGTGCTTCAAGATCTA+CGG 0.553070 7.2:+70491974 MS.gene060053:CDS
TGACATTAATTGTTGAGCAT+AGG 0.558462 7.2:-70491817 None:intergenic
GTCAAATCCATCTCCTGGTA+GGG 0.558901 7.2:-70490532 None:intergenic
ATTCTTTGATGCATTTGTTG+TGG 0.559042 7.2:+70492025 MS.gene060053:CDS
GCATAGGTTGGGTCCAAAGT+GGG 0.561258 7.2:-70491801 None:intergenic
AACTATGTATCACAGCTTGG+AGG 0.574132 7.2:+70491552 MS.gene060053:intron
TTTACACAAACTATCACCAC+TGG 0.575719 7.2:+70488418 MS.gene060053:CDS
AGCATAGGTTGGGTCCAAAG+TGG 0.591518 7.2:-70491802 None:intergenic
TAAGAAGCTTGGAAGAGTTG+GGG 0.593331 7.2:+70492052 MS.gene060053:CDS
CTGCACATGAAACAACTCCT+GGG 0.618931 7.2:-70490593 None:intergenic
ATGCTCAACAATTAATGTCA+GGG 0.619021 7.2:+70491820 MS.gene060053:CDS
GTTGAACTTGGACGTAGAGA+CGG 0.623890 7.2:+70491588 MS.gene060053:CDS
GTCACAATGTGAGAATCCTA+CGG 0.630778 7.2:-70491742 None:intergenic
TAGAGACGGACTCAATTCCA+AGG 0.633393 7.2:+70491602 MS.gene060053:CDS
CATAGGTTGGGTCCAAAGTG+GGG 0.641266 7.2:-70491800 None:intergenic
CAAGCCTATAACGTCTCTAG+TGG 0.645652 7.2:-70490631 None:intergenic
GATTAAAGCAAAGCAAGCAG+TGG 0.655619 7.2:+70490560 MS.gene060053:CDS
CCGTTTATACTCATCACGAG+TGG 0.675398 7.2:+70491776 MS.gene060053:CDS
CTCTCAGGAGCACACACCGT+AGG 0.708348 7.2:+70491726 MS.gene060053:CDS
ACGAAGAGTAGCTTGTCCAG+TGG 0.713638 7.2:-70488434 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAATAAATAAATAA+TGG - chr7.2:70490013-70490032 None:intergenic 0.0%
!! CAATTAATTTAAAAATGATT+TGG + chr7.2:70490409-70490428 MS.gene060053:intron 10.0%
!! TATTACAAAAATTTAGTTAA+TGG + chr7.2:70491915-70491934 MS.gene060053:CDS 10.0%
!!! AAAAAAATGTATTTTGAATT+TGG + chr7.2:70490056-70490075 MS.gene060053:intron 10.0%
!!! ATTGATTTTTACTTAATTTT+AGG - chr7.2:70490729-70490748 None:intergenic 10.0%
!!! CAAATCATTTTTAAATTAAT+TGG - chr7.2:70490411-70490430 None:intergenic 10.0%
!!! GTAATTTTGTTATAAAATAA+GGG - chr7.2:70490702-70490721 None:intergenic 10.0%
!!! TAAAATTGACTTTTTTTTAT+GGG + chr7.2:70491349-70491368 MS.gene060053:intron 10.0%
!!! TGTAATTTTGTTATAAAATA+AGG - chr7.2:70490703-70490722 None:intergenic 10.0%
!!! TTGATTTTTACTTAATTTTA+GGG - chr7.2:70490728-70490747 None:intergenic 10.0%
!! AAAAAAAAAAAAAACTCTTG+TGG - chr7.2:70490766-70490785 None:intergenic 15.0%
!! AAAAAAAAAAAAACTCTTGT+GGG - chr7.2:70490765-70490784 None:intergenic 15.0%
!! AAAAATTTAGTTAATGGAAA+AGG + chr7.2:70491921-70491940 MS.gene060053:CDS 15.0%
!! AAAATACTCTTTAATTAGTT+TGG - chr7.2:70491297-70491316 None:intergenic 15.0%
!! AAAATTTAGTTAATGGAAAA+GGG + chr7.2:70491922-70491941 MS.gene060053:CDS 15.0%
!! AATTTACTTATAATAGTTAC+CGG + chr7.2:70489254-70489273 MS.gene060053:intron 15.0%
!! ACTATAAAAAAAATTAGTAG+TGG - chr7.2:70489402-70489421 None:intergenic 15.0%
!! ATAAAGAGTTTAATGAATTA+AGG - chr7.2:70490372-70490391 None:intergenic 15.0%
!! GAAAATAAGAATAGTATTTA+TGG + chr7.2:70488279-70488298 MS.gene060053:CDS 15.0%
!! TAAAGAGTTTAATGAATTAA+GGG - chr7.2:70490371-70490390 None:intergenic 15.0%
!! TTATAACCTTAAGAAAAATT+AGG + chr7.2:70490097-70490116 MS.gene060053:intron 15.0%
!! TTATTAAAATGTGACATATT+TGG - chr7.2:70490827-70490846 None:intergenic 15.0%
!! TTGAAAATATATACTAAATG+AGG - chr7.2:70488536-70488555 None:intergenic 15.0%
!! TTTCTCAGAATTAAAAAAAT+TGG - chr7.2:70491053-70491072 None:intergenic 15.0%
!!! AAATATTTAATTTTCAATGC+TGG + chr7.2:70489848-70489867 MS.gene060053:intron 15.0%
!!! ATAAGCAAATTTTTACTTTT+TGG + chr7.2:70489154-70489173 MS.gene060053:intron 15.0%
!!! GCTTCTTAATTTTTTTTTTT+TGG + chr7.2:70491455-70491474 MS.gene060053:intron 15.0%
!!! GTAAAATTGACTTTTTTTTA+TGG + chr7.2:70491348-70491367 MS.gene060053:intron 15.0%
!!! TAAGTAAATTTTGACTTTTT+AGG - chr7.2:70489244-70489263 None:intergenic 15.0%
!!! TATAGTATTTTCCTTTTTTT+TGG - chr7.2:70491231-70491250 None:intergenic 15.0%
!!! TGACTTGTATAAAAAAAAAA+AGG + chr7.2:70490872-70490891 MS.gene060053:intron 15.0%
!!! TTAAACTCTTTATTTCAAAT+TGG + chr7.2:70490379-70490398 MS.gene060053:intron 15.0%
!! AAAAAAAAAAAACTCTTGTG+GGG - chr7.2:70490764-70490783 None:intergenic 20.0%
!! AAAATGATAGAAATATGCTA+TGG + chr7.2:70489526-70489545 MS.gene060053:intron 20.0%
!! AACAGAAAATTAATACAACT+TGG + chr7.2:70489645-70489664 MS.gene060053:intron 20.0%
!! ATTCTTGAATACCAAAAAAA+AGG + chr7.2:70491217-70491236 MS.gene060053:intron 20.0%
!! CTAACATAATTTCATAAAAC+TGG + chr7.2:70489061-70489080 MS.gene060053:intron 20.0%
!! TCTTCATATATATGTATGTA+TGG + chr7.2:70488591-70488610 MS.gene060053:intron 20.0%
!! TTAACAAGTTAAAGATGAAT+TGG - chr7.2:70489362-70489381 None:intergenic 20.0%
!! TTATCAAAATAAACTCTTGT+GGG - chr7.2:70490797-70490816 None:intergenic 20.0%
!! TTTATCAAAATAAACTCTTG+TGG - chr7.2:70490798-70490817 None:intergenic 20.0%
!!! AAACAAAACCAAATCAATTT+TGG - chr7.2:70489706-70489725 None:intergenic 20.0%
!!! ATATTTTTTTGCACAAAATC+AGG - chr7.2:70489834-70489853 None:intergenic 20.0%
!!! ATTGTCAAACTCATTTTTTT+AGG + chr7.2:70490929-70490948 MS.gene060053:intron 20.0%
!!! GAAACTTTTATAAGATCTTT+AGG + chr7.2:70488827-70488846 MS.gene060053:intron 20.0%
!!! TCTTTAACTTGTTAAGATAA+TGG + chr7.2:70489367-70489386 MS.gene060053:intron 20.0%
!!! TTAATGAACTTTTAAGTGAA+AGG + chr7.2:70488685-70488704 MS.gene060053:intron 20.0%
! AAAATCACAAATAAGCCAAA+AGG + chr7.2:70489954-70489973 MS.gene060053:intron 25.0%
! AAATCACAAATAAGCCAAAA+GGG + chr7.2:70489955-70489974 MS.gene060053:intron 25.0%
! AAATTTGCATTAACGATGTA+TGG + chr7.2:70488919-70488938 MS.gene060053:intron 25.0%
! AAGAATAGTATTTATGGCTT+TGG + chr7.2:70488285-70488304 MS.gene060053:CDS 25.0%
! AGAACAAAATTTAAACGAAG+TGG - chr7.2:70491492-70491511 None:intergenic 25.0%
! AGATCATCTGTTATATGATA+CGG - chr7.2:70488992-70489011 None:intergenic 25.0%
! ATGAGTAAATCAGAACAAAA+CGG + chr7.2:70490273-70490292 MS.gene060053:intron 25.0%
! ATGTATAGTTGAAATCTGAA+TGG + chr7.2:70490305-70490324 MS.gene060053:intron 25.0%
! ATTAACGATGTATGGAAATT+TGG + chr7.2:70488927-70488946 MS.gene060053:intron 25.0%
! CATTCAATAAATGATGTATG+TGG + chr7.2:70489180-70489199 MS.gene060053:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr7.2:70489199-70489180 None:intergenic 25.0%
! GAAACAATTCAATAACTATG+AGG - chr7.2:70488632-70488651 None:intergenic 25.0%
! TGGTATTCAAGAATAATTGA+AGG - chr7.2:70491211-70491230 None:intergenic 25.0%
! TGTATAGTTGAAATCTGAAT+GGG + chr7.2:70490306-70490325 MS.gene060053:intron 25.0%
! TTATCCAATTATTAGTTCAC+AGG - chr7.2:70489926-70489945 None:intergenic 25.0%
!! AATTTGCTTATAATACTGAC+CGG - chr7.2:70489145-70489164 None:intergenic 25.0%
!! GAATGGATTTCAAGAATTAT+GGG + chr7.2:70490328-70490347 MS.gene060053:intron 25.0%
!! TAGTGTATAAATTTCCCTTT+TGG - chr7.2:70489972-70489991 None:intergenic 25.0%
!!! AAAGAACAATTTTGATGTGT+AGG + chr7.2:70490440-70490459 MS.gene060053:intron 25.0%
!!! AAGAACAATTTTGATGTGTA+GGG + chr7.2:70490441-70490460 MS.gene060053:intron 25.0%
!!! AATAATTTTTTTCCCACGTT+CGG + chr7.2:70490250-70490269 MS.gene060053:intron 25.0%
!!! AATTTCATAAAACTGGTTTG+TGG + chr7.2:70489068-70489087 MS.gene060053:intron 25.0%
!!! ATTTCATAAAACTGGTTTGT+GGG + chr7.2:70489069-70489088 MS.gene060053:intron 25.0%
!!! TAAGATCTTTAGGACTTTTA+TGG + chr7.2:70488837-70488856 MS.gene060053:intron 25.0%
!!! TCGTTAATGCAAATTTTTAG+TGG - chr7.2:70488915-70488934 None:intergenic 25.0%
AATTGCTGCCAAAATTGATT+TGG + chr7.2:70489695-70489714 MS.gene060053:intron 30.0%
AGATGAACAAGAAAGGAAAT+TGG - chr7.2:70491182-70491201 None:intergenic 30.0%
AGTATAAACGGTTTGTGAAT+TGG - chr7.2:70491767-70491786 None:intergenic 30.0%
ATGCTCAACAATTAATGTCA+GGG + chr7.2:70491820-70491839 MS.gene060053:CDS 30.0%
ATGTATGTGGTCTATATTGT+AGG - chr7.2:70489206-70489225 None:intergenic 30.0%
ATGTTCAGTTTGAGTATCAA+GGG - chr7.2:70491880-70491899 None:intergenic 30.0%
ATGTTCGATGTCAATTTGAA+GGG + chr7.2:70491424-70491443 MS.gene060053:intron 30.0%
ATTAATTGTTGAGCATAGGT+TGG - chr7.2:70491816-70491835 None:intergenic 30.0%
ATTATTGAAGAGTCTCACAT+TGG - chr7.2:70490236-70490255 None:intergenic 30.0%
ATTCTTCCTATATGTATGTG+TGG + chr7.2:70488724-70488743 MS.gene060053:intron 30.0%
ATTGAACCACACATACATAT+AGG - chr7.2:70488733-70488752 None:intergenic 30.0%
CAAGCAAATTCTTATGACAT+GGG - chr7.2:70489596-70489615 None:intergenic 30.0%
CGTAGAAATTCTCTACTAAT+TGG - chr7.2:70488345-70488364 None:intergenic 30.0%
GTTTCTTAGATGAACAAGAA+AGG - chr7.2:70491189-70491208 None:intergenic 30.0%
TACTTATAATAGTTACCGGT+GGG + chr7.2:70489258-70489277 MS.gene060053:intron 30.0%
TATATGATCATTGATCATCG+AGG - chr7.2:70488658-70488677 None:intergenic 30.0%
TATGCTCAACAATTAATGTC+AGG + chr7.2:70491819-70491838 MS.gene060053:CDS 30.0%
TATGTTCAGTTTGAGTATCA+AGG - chr7.2:70491881-70491900 None:intergenic 30.0%
TATGTTCGATGTCAATTTGA+AGG + chr7.2:70491423-70491442 MS.gene060053:intron 30.0%
TGACATTAATTGTTGAGCAT+AGG - chr7.2:70491820-70491839 None:intergenic 30.0%
TTAATTGTTGAGCATAGGTT+GGG - chr7.2:70491815-70491834 None:intergenic 30.0%
TTACTTATAATAGTTACCGG+TGG + chr7.2:70489257-70489276 MS.gene060053:intron 30.0%
TTATGTTAGTTCCAACTGAA+CGG - chr7.2:70489050-70489069 None:intergenic 30.0%
TTGAAACTAAATTGAATCGC+TGG - chr7.2:70489324-70489343 None:intergenic 30.0%
! AGTTGATTCAGATTGAAAGT+TGG - chr7.2:70491657-70491676 None:intergenic 30.0%
! ATTCTTTGATGCATTTGTTG+TGG + chr7.2:70492025-70492044 MS.gene060053:CDS 30.0%
! GGAATGGATTTCAAGAATTA+TGG + chr7.2:70490327-70490346 MS.gene060053:intron 30.0%
! TCAAATCTGAAACTTTGAGA+AGG - chr7.2:70491402-70491421 None:intergenic 30.0%
!! AGTATTTATGGCTTTGGTTA+TGG + chr7.2:70488291-70488310 MS.gene060053:CDS 30.0%
!! GTTGTTGAATTTGCTAATGA+TGG + chr7.2:70491996-70492015 MS.gene060053:CDS 30.0%
!! TGTAAATTTCCTGTTTTTCC+TGG + chr7.2:70491087-70491106 MS.gene060053:intron 30.0%
!! TTCAGATTGAAAGTTGGTTT+TGG - chr7.2:70491651-70491670 None:intergenic 30.0%
!!! GATCAAGTTTTATTCACTGA+TGG + chr7.2:70491957-70491976 MS.gene060053:CDS 30.0%
AAAAATTAGGCCTCGAGTAT+TGG + chr7.2:70490110-70490129 MS.gene060053:intron 35.0%
AAGATTGAATTAGAGCTGCT+AGG + chr7.2:70489464-70489483 MS.gene060053:intron 35.0%
AATGTTATCTCGTGTCTCTT+AGG - chr7.2:70490678-70490697 None:intergenic 35.0%
AGATGCAGAAAAAGATGCAA+AGG + chr7.2:70490500-70490519 MS.gene060053:CDS 35.0%
AGTTGAAATCTGAATGGGAA+TGG + chr7.2:70490311-70490330 MS.gene060053:intron 35.0%
ATCTTATCTTACCGTTCAGT+TGG + chr7.2:70489036-70489055 MS.gene060053:intron 35.0%
ATGTTTGGGTCAACATTTCT+AGG - chr7.2:70491849-70491868 None:intergenic 35.0%
ATTAAGAAGCTTGGAAGAGT+TGG + chr7.2:70492050-70492069 MS.gene060053:CDS 35.0%
ATTTCAAGAATTATGGGAGG+TGG + chr7.2:70490334-70490353 MS.gene060053:intron 35.0%
CAAATAACACCAGGAAAAAC+AGG - chr7.2:70491099-70491118 None:intergenic 35.0%
CACTCCTGTGAACTAATAAT+TGG + chr7.2:70489919-70489938 MS.gene060053:intron 35.0%
CATATTTGCGATTAAGACCT+AGG - chr7.2:70488888-70488907 None:intergenic 35.0%
CGATGTATGGAAATTTGGAA+TGG + chr7.2:70488932-70488951 MS.gene060053:intron 35.0%
GCAAGCAAATTCTTATGACA+TGG - chr7.2:70489597-70489616 None:intergenic 35.0%
GTTATGATTGCTTCACCAAA+TGG + chr7.2:70490477-70490496 MS.gene060053:CDS 35.0%
TACTGTAGCCAAGTAATTTG+TGG - chr7.2:70489803-70489822 None:intergenic 35.0%
TCTCGACGTGTTTATTATTC+AGG - chr7.2:70490202-70490221 None:intergenic 35.0%
TGGATTTCAAGAATTATGGG+AGG + chr7.2:70490331-70490350 MS.gene060053:intron 35.0%
TGTTTGGGTCAACATTTCTA+GGG - chr7.2:70491848-70491867 None:intergenic 35.0%
TTAAGAAGCTTGGAAGAGTT+GGG + chr7.2:70492051-70492070 MS.gene060053:CDS 35.0%
TTCAACTATGTATCACAGCT+TGG + chr7.2:70491549-70491568 MS.gene060053:intron 35.0%
TTGAGAAGGATCATACTTCA+AGG - chr7.2:70491388-70491407 None:intergenic 35.0%
TTTACACAAACTATCACCAC+TGG + chr7.2:70488418-70488437 MS.gene060053:CDS 35.0%
TTTCAAGAATTATGGGAGGT+GGG + chr7.2:70490335-70490354 MS.gene060053:intron 35.0%
! ACTGTAGCCAAGTAATTTGT+GGG - chr7.2:70489802-70489821 None:intergenic 35.0%
! AGAGTGCAATCATGTCTTTT+TGG - chr7.2:70491710-70491729 None:intergenic 35.0%
! CTTTTATTCAATACTCCCTC+CGG + chr7.2:70489123-70489142 MS.gene060053:intron 35.0%
! GCTTTTACCATCATAACTAG+TGG + chr7.2:70488313-70488332 MS.gene060053:CDS 35.0%
! TCGAGGCCTAATTTTTCTTA+AGG - chr7.2:70490106-70490125 None:intergenic 35.0%
! TCTTTTTCTGCATCTCCATT+TGG - chr7.2:70490495-70490514 None:intergenic 35.0%
! TGTTTCATGTGCAGACATTT+TGG + chr7.2:70490602-70490621 MS.gene060053:CDS 35.0%
! TTTGCATGATTGCTTTGTTG+AGG + chr7.2:70488462-70488481 MS.gene060053:CDS 35.0%
!! AACGCTATTTTCTCCAAACA+CGG + chr7.2:70491678-70491697 MS.gene060053:CDS 35.0%
!! ACCTCACTAGTCAGTTTTAT+GGG - chr7.2:70490170-70490189 None:intergenic 35.0%
!! AGTTTTATGGGGTTGTGTTA+AGG - chr7.2:70490158-70490177 None:intergenic 35.0%
!!! ATCTTTAGGACTTTTATGGC+CGG + chr7.2:70488841-70488860 MS.gene060053:intron 35.0%
!!! CAATCATGTCTTTTTGGCTT+AGG - chr7.2:70491704-70491723 None:intergenic 35.0%
!!! TGACTTTTTTTTATGGGCGT+TGG + chr7.2:70491355-70491374 MS.gene060053:intron 35.0%
AAAGACATGATTGCACTCTC+AGG + chr7.2:70491711-70491730 MS.gene060053:CDS 40.0%
AAAGAGTTTCATACTCCCAC+CGG - chr7.2:70489276-70489295 None:intergenic 40.0%
AACTATGTATCACAGCTTGG+AGG + chr7.2:70491552-70491571 MS.gene060053:intron 40.0%
AAGGAAAATCTTTCCCTACC+AGG + chr7.2:70490519-70490538 MS.gene060053:CDS 40.0%
ACCATCATAACTAGTGGAGA+AGG + chr7.2:70488319-70488338 MS.gene060053:CDS 40.0%
ATTGCCACTAGAGACGTTAT+AGG + chr7.2:70490627-70490646 MS.gene060053:CDS 40.0%
CCACCAAAAGTTCAACGTTA+GGG - chr7.2:70488378-70488397 None:intergenic 40.0%
CCACTCGTGATGAGTATAAA+CGG - chr7.2:70491779-70491798 None:intergenic 40.0%
GATTAAAGCAAAGCAAGCAG+TGG + chr7.2:70490560-70490579 MS.gene060053:CDS 40.0%
GGGGTAAAAACTGGTAAAGA+GGG + chr7.2:70492071-70492090 MS.gene060053:CDS 40.0%
GTCACAATGTGAGAATCCTA+CGG - chr7.2:70491745-70491764 None:intergenic 40.0%
GTTGTGGCTATTAAGAAGCT+TGG + chr7.2:70492041-70492060 MS.gene060053:CDS 40.0%
TAAGAAGCTTGGAAGAGTTG+GGG + chr7.2:70492052-70492071 MS.gene060053:CDS 40.0%
TCCTAAACCAAGGGATTTAG+TGG - chr7.2:70489776-70489795 None:intergenic 40.0%
TCTAAGAAAGCCAATACTCG+AGG - chr7.2:70490123-70490142 None:intergenic 40.0%
TGATCATTGATCATCGAGGA+TGG - chr7.2:70488654-70488673 None:intergenic 40.0%
TGATTTACTCATCCGAACGT+GGG - chr7.2:70490265-70490284 None:intergenic 40.0%
TGCTTATAATACTGACCGGA+GGG - chr7.2:70489141-70489160 None:intergenic 40.0%
TGCTTCAACATTTGATGCCT+TGG - chr7.2:70491622-70491641 None:intergenic 40.0%
TGGGGTAAAAACTGGTAAAG+AGG + chr7.2:70492070-70492089 MS.gene060053:CDS 40.0%
TTGCTTATAATACTGACCGG+AGG - chr7.2:70489142-70489161 None:intergenic 40.0%
! CACCTCACTAGTCAGTTTTA+TGG - chr7.2:70490171-70490190 None:intergenic 40.0%
! CTGTAGCCAAGTAATTTGTG+GGG - chr7.2:70489801-70489820 None:intergenic 40.0%
! GGCTTACTCTTCTTTTTCCT+AGG + chr7.2:70488868-70488887 MS.gene060053:intron 40.0%
! TGATGGTGCTTCAAGATCTA+CGG + chr7.2:70491974-70491993 MS.gene060053:CDS 40.0%
! TTGCCCTAACGTTGAACTTT+TGG + chr7.2:70488372-70488391 MS.gene060053:CDS 40.0%
!! CCTCACTAGTCAGTTTTATG+GGG - chr7.2:70490169-70490188 None:intergenic 40.0%
!! TCATAAAACTGGTTTGTGGG+TGG + chr7.2:70489072-70489091 MS.gene060053:intron 40.0%
AAAGAAGAGTAAGCCTCCAC+CGG - chr7.2:70488863-70488882 None:intergenic 45.0%
AATCTTTCCCTACCAGGAGA+TGG + chr7.2:70490525-70490544 MS.gene060053:CDS 45.0%
ACAGTGTCAAATCCATCTCC+TGG - chr7.2:70490540-70490559 None:intergenic 45.0%
AGGACTCCCCACAAATTACT+TGG + chr7.2:70489792-70489811 MS.gene060053:intron 45.0%
CAAGCCTATAACGTCTCTAG+TGG - chr7.2:70490634-70490653 None:intergenic 45.0%
CAAGGGCAAGCACAATGTTT+GGG - chr7.2:70491863-70491882 None:intergenic 45.0%
CACTAGAGACGTTATAGGCT+TGG + chr7.2:70490632-70490651 MS.gene060053:CDS 45.0%
CCAAGTTCAACGCTGAATGA+TGG - chr7.2:70491579-70491598 None:intergenic 45.0%
CCCCATAAAACTGACTAGTG+AGG + chr7.2:70490166-70490185 MS.gene060053:intron 45.0%
CCGTTTATACTCATCACGAG+TGG + chr7.2:70491776-70491795 MS.gene060053:CDS 45.0%
CTCTTAGCCACTAAATCCCT+TGG + chr7.2:70489766-70489785 MS.gene060053:intron 45.0%
CTGATTTACTCATCCGAACG+TGG - chr7.2:70490266-70490285 None:intergenic 45.0%
CTGCACATGAAACAACTCCT+GGG - chr7.2:70490596-70490615 None:intergenic 45.0%
CTGGTAAAGAGGGAGAGATT+AGG + chr7.2:70492081-70492100 MS.gene060053:CDS 45.0%
GCCACCAAAAGTTCAACGTT+AGG - chr7.2:70488379-70488398 None:intergenic 45.0%
GCCACTAAATCCCTTGGTTT+AGG + chr7.2:70489772-70489791 MS.gene060053:intron 45.0%
GCCTTCTCCACTAGTTATGA+TGG - chr7.2:70488323-70488342 None:intergenic 45.0%
GGAAGAGTTGGGGTAAAAAC+TGG + chr7.2:70492062-70492081 MS.gene060053:CDS 45.0%
GTCAAATCCATCTCCTGGTA+GGG - chr7.2:70490535-70490554 None:intergenic 45.0%
GTTGAACTTGGACGTAGAGA+CGG + chr7.2:70491588-70491607 MS.gene060053:CDS 45.0%
TAGTCACCACACACAAGTAG+TGG + chr7.2:70489551-70489570 MS.gene060053:intron 45.0%
TATTTGCACCCCCACATTTG+TGG + chr7.2:70491113-70491132 MS.gene060053:intron 45.0%
TCAAGGGCAAGCACAATGTT+TGG - chr7.2:70491864-70491883 None:intergenic 45.0%
TCTGCACATGAAACAACTCC+TGG - chr7.2:70490597-70490616 None:intergenic 45.0%
TGAATCGCTGGAACATCGTA+AGG - chr7.2:70489312-70489331 None:intergenic 45.0%
TGTCAAATCCATCTCCTGGT+AGG - chr7.2:70490536-70490555 None:intergenic 45.0%
! CCATCATTCAGCGTTGAACT+TGG + chr7.2:70491576-70491595 MS.gene060053:CDS 45.0%
! CCCTAACGTTGAACTTTTGG+TGG + chr7.2:70488375-70488394 MS.gene060053:CDS 45.0%
! TAGAGACGGACTCAATTCCA+AGG + chr7.2:70491602-70491621 MS.gene060053:CDS 45.0%
!! TTTAGGACTTTTATGGCCGG+TGG + chr7.2:70488844-70488863 MS.gene060053:intron 45.0%
!!! TTTTTGGCTTAGGCCGTGTT+TGG - chr7.2:70491694-70491713 None:intergenic 45.0%
!!! ACAATTATATATTAATATTT+TGG - chr7.2:70489742-70489761 None:intergenic 5.0%
!!! ATTAAAATGTATTTTTTTTT+AGG - chr7.2:70491000-70491019 None:intergenic 5.0%
!!! CAATTATATATTAATATTTT+GGG - chr7.2:70489741-70489760 None:intergenic 5.0%
!!! TATTTTTAAATTTTTGTTTA+AGG + chr7.2:70488765-70488784 MS.gene060053:intron 5.0%
ACCCAAGTCCACAAATGTGG+GGG - chr7.2:70491124-70491143 None:intergenic 50.0%
ACCCCCACATTTGTGGACTT+GGG + chr7.2:70491120-70491139 MS.gene060053:intron 50.0%
CACCCAAGTCCACAAATGTG+GGG - chr7.2:70491125-70491144 None:intergenic 50.0%
CCACCCAAGTCCACAAATGT+GGG - chr7.2:70491126-70491145 None:intergenic 50.0%
TGTGGGGAGTCCTAAACCAA+GGG - chr7.2:70489785-70489804 None:intergenic 50.0%
TTGCGTCCACTACTTGTGTG+TGG - chr7.2:70489560-70489579 None:intergenic 50.0%
TTGTGGGGAGTCCTAAACCA+AGG - chr7.2:70489786-70489805 None:intergenic 50.0%
! ACGAAGAGTAGCTTGTCCAG+TGG - chr7.2:70488437-70488456 None:intergenic 50.0%
! AGCATAGGTTGGGTCCAAAG+TGG - chr7.2:70491805-70491824 None:intergenic 50.0%
! CATAGGTTGGGTCCAAAGTG+GGG - chr7.2:70491803-70491822 None:intergenic 50.0%
! GCATAGGTTGGGTCCAAAGT+GGG - chr7.2:70491804-70491823 None:intergenic 50.0%
ATCACGAGTGGACCCCACTT+TGG + chr7.2:70491788-70491807 MS.gene060053:CDS 55.0%
CACCCCCACATTTGTGGACT+TGG + chr7.2:70491119-70491138 MS.gene060053:intron 55.0%
CCCACATTTGTGGACTTGGG+TGG + chr7.2:70491123-70491142 MS.gene060053:intron 55.0%
GCCACCCAAGTCCACAAATG+TGG - chr7.2:70491127-70491146 None:intergenic 55.0%
! AGGACTTTTATGGCCGGTGG+AGG + chr7.2:70488847-70488866 MS.gene060053:intron 55.0%
! GTGGGGGTGCAAATAACACC+AGG - chr7.2:70491108-70491127 None:intergenic 55.0%
GCAGTGGAAGCTGTTTGCCC+AGG + chr7.2:70490576-70490595 MS.gene060053:CDS 60.0%
! CTCTCAGGAGCACACACCGT+AGG + chr7.2:70491726-70491745 MS.gene060053:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 70488274 70492127 70488274 ID=MS.gene060053
chr7.2 mRNA 70488274 70492127 70488274 ID=MS.gene060053.t1;Parent=MS.gene060053
chr7.2 exon 70488274 70488483 70488274 ID=MS.gene060053.t1.exon1;Parent=MS.gene060053.t1
chr7.2 CDS 70488274 70488483 70488274 ID=cds.MS.gene060053.t1;Parent=MS.gene060053.t1
chr7.2 exon 70490462 70490653 70490462 ID=MS.gene060053.t1.exon2;Parent=MS.gene060053.t1
chr7.2 CDS 70490462 70490653 70490462 ID=cds.MS.gene060053.t1;Parent=MS.gene060053.t1
chr7.2 exon 70491567 70492127 70491567 ID=MS.gene060053.t1.exon3;Parent=MS.gene060053.t1
chr7.2 CDS 70491567 70492127 70491567 ID=cds.MS.gene060053.t1;Parent=MS.gene060053.t1
Gene Sequence

>MS.gene060053

ATGGAGAAAATAAGAATAGTATTTATGGCTTTGGTTATGGCTTTTACCATCATAACTAGTGGAGAAGGCCAATTAGTAGAGAATTTCTACGTTTCAAGTTGCCCTAACGTTGAACTTTTGGTGGCTCAAGCAGTGACAAACAAGTTTACACAAACTATCACCACTGGACAAGCTACTCTTCGTCTATTTTTGCATGATTGCTTTGTTGAGGTATACTCACATACATACTTAATTTTCACAGTTCATATATACTCAAGTTCCTCATTTAGTATATATTTTCAAAGTTTTTTTTTTATAAAGAAAAAATTATATAAGCTTCTTCATATATATGTATGTATGGTTCAATTTCTTGATTCCTCATAGTTATTGAATTGTTTCCATCCTCGATGATCAATGATCATATAATTGAAATTAATGAACTTTTAAGTGAAAGGTGTAGAAAATCATGCAATTCTTCCTATATGTATGTGTGGTTCAATTTCTACTACGTTTATTTTTAAATTTTTGTTTAAGGTGTACGAGTAGTTTTTTGTCATAACGTCATATGTGCATTGAAACTTTTATAAGATCTTTAGGACTTTTATGGCCGGTGGAGGCTTACTCTTCTTTTTCCTAGGTCTTAATCGCAAATATGTCATCCACTAAAAATTTGCATTAACGATGTATGGAAATTTGGAATGGTATGCGTGACTTATCTTTTAGAATGTTAAAAGTTCCGTATCATATAACAGATGATCTAAATAAGTGTTTATAAATAATGACATCTTATCTTACCGTTCAGTTGGAACTAACATAATTTCATAAAACTGGTTTGTGGGTGGAAATTGAAGTTATAAACACTTAAATCATCTTTTATTCAATACTCCCTCCGGTCAGTATTATAAGCAAATTTTTACTTTTTGGATTCATTCAATAAATGATGTATGTGGCCTACAATATAGACCACATACATCATTTATTGAATGAACCTAAAAAGTCAAAATTTACTTATAATAGTTACCGGTGGGAGTATGAAACTCTTTAACATAGAATAAACCTTACGATGTTCCAGCGATTCAATTTAGTTTCAAACTGAAAATAATACTCCAATTCATCTTTAACTTGTTAAGATAATGGACAAATTAACCACTACTAATTTTTTTTATAGTTGTACAAAAGAGATTAGTTTGTCTTCATATTATTTTTAGTCAAAGATTGAATTAGAGCTGCTAGGAAATTGTGAGAGATTGAATCTTTTGATTTTTAGAAGCAGAAAATGATAGAAATATGCTATGGAATAGTCACCACACACAAGTAGTGGACGCAATAAACAATAATATCCCATGTCATAAGAATTTGCTTGCTTGCTAGAACTAGAAGACATTGACTAAGAACAGAAAATTAATACAACTTGGATTTGATTTTTCATTTCAATAAAACTCAATTGCTGCCAAAATTGATTTGGTTTTGTTTGTTTGTTTTTATCCCAAAATATTAATATATAATTGTGATTCTCTTAGCCACTAAATCCCTTGGTTTAGGACTCCCCACAAATTACTTGGCTACAGTATTGATAGACCTGATTTTGTGCAAAAAAATATTTAATTTTCAATGCTGGAGCTATACTACAAGAATAACTCTATTTCACTCAACTGTTAGTATACTGCACTCCTGTGAACTAATAATTGGATAATTATTGTAAAAATCACAAATAAGCCAAAAGGGAAATTTATACACTATGTTTACATTTAACTTGTCCATTATTTATTTATTTATTTATTTAATTACACTGTTTATTTTTTGAAAAAAATGTATTTTGAATTTGGAATATAGTTTTTATTTATTTATAACCTTAAGAAAAATTAGGCCTCGAGTATTGGCTTTCTTAGAAATTGTGATTGACCTTAACACAACCCCATAAAACTGACTAGTGAGGTGATGATTGTCCTGAATAATAAACACGTCGAGATTATCTTTTGTCCAATGTGAGACTCTTCAATAATTTTTTTCCCACGTTCGGATGAGTAAATCAGAACAAAACGGTGTTTTTTTATGTATAGTTGAAATCTGAATGGGAATGGATTTCAAGAATTATGGGAGGTGGGAAAAGAAATTCCCTTAATTCATTAAACTCTTTATTTCAAATTGGTTTAATCCAATTAATTTAAAAATGATTTGGTTTGTATTAAAGAACAATTTTGATGTGTAGGGATGTGATGCTTCAGTTATGATTGCTTCACCAAATGGAGATGCAGAAAAAGATGCAAAGGAAAATCTTTCCCTACCAGGAGATGGATTTGACACTGTGATTAAAGCAAAGCAAGCAGTGGAAGCTGTTTGCCCAGGAGTTGTTTCATGTGCAGACATTTTGGCAATTGCCACTAGAGACGTTATAGGCTTGGTAAGCATTATTATTTTAGTGCCTAAGAGACACGAGATAACATTACCCTTATTTTATAACAAAATTACAAACCCTAAAATTAAGTAAAAATCAATGCATTTCATTAACCCCACAAGAGTTTTTTTTTTTTTTTGAAGAAGCCCACAAGAGTTTATTTTGATAAAGTATATCCAAATATGTCACATTTTAATAAGATTTAGAAACTTATAGTGACATCATGACTTGTATAAAAAAAAAAAGGTTGTTTCAATAAAGAAAACTTAGTGACTAATTGCATTGTCAAACTCATTTTTTTAGGTTAAATTGTCAAACTCATCAAAAGAAATAATACATTAAATTGATTCCTAAAAAAAAATACATTTTAATTGTTTGCGTGTATTTATAAATATCATACTACCAATTTTTTTAATTCTGAGAAAGTTAGATGCATCTTTGTAAATTTCCTGTTTTTCCTGGTGTTATTTGCACCCCCACATTTGTGGACTTGGGTGGCTTTTAATACATAGTCTTTCATTAAAAAAAAAACCAATTTCCTTTCTTGTTCATCTAAGAAACCTTCAATTATTCTTGAATACCAAAAAAAAGGAAAATACTATAAAATTTGTTTCATAAGAATAACATAATTATTACAAAATAAAATCCAAACTAATTAAAGAGTATTTTTTAATCATATCATTAATAGAAGATGTAAGTAGTAAAATTGACTTTTTTTTATGGGCGTTGGCTTGAAACCTTGAAGTATGATCCTTCTCAAAGTTTCAGATTTGATTATGTTCGATGTCAATTTGAAGGGCTAGTTTTGCTTCTTAATTTTTTTTTTTTGGACTATTTTAAACCACTTCGTTTAAATTTTGTTCTTCTTATAATCAACATCAAATTGATGTATATTATTATGTTCAACTATGTATCACAGCTTGGAGGTCCATCATTCAGCGTTGAACTTGGACGTAGAGACGGACTCAATTCCAAGGCATCAAATGTTGAAGCAAATCTTCCAAAACCAACTTTCAATCTGAATCAACTAAACGCTATTTTCTCCAAACACGGCCTAAGCCAAAAAGACATGATTGCACTCTCAGGAGCACACACCGTAGGATTCTCACATTGTGACCAATTCACAAACCGTTTATACTCATCACGAGTGGACCCCACTTTGGACCCAACCTATGCTCAACAATTAATGTCAGGGTGCCCTAGAAATGTTGACCCAAACATTGTGCTTGCCCTTGATACTCAAACTGAACATACTTTTGATAATTTGTATTACAAAAATTTAGTTAATGGAAAAGGGTTGTTAAGTTCAGATCAAGTTTTATTCACTGATGGTGCTTCAAGATCTACGGTTGTTGAATTTGCTAATGATGGTAGTAAATTCTTTGATGCATTTGTTGTGGCTATTAAGAAGCTTGGAAGAGTTGGGGTAAAAACTGGTAAAGAGGGAGAGATTAGGAGAGATTGTAGTAAATTTAATTAG
Protein sequence

>MS.gene060053.t1

MEKIRIVFMALVMAFTIITSGEGQLVENFYVSSCPNVELLVAQAVTNKFTQTITTGQATLRLFLHDCFVEGCDASVMIASPNGDAEKDAKENLSLPGDGFDTVIKAKQAVEAVCPGVVSCADILAIATRDVIGLLGGPSFSVELGRRDGLNSKASNVEANLPKPTFNLNQLNAIFSKHGLSQKDMIALSGAHTVGFSHCDQFTNRLYSSRVDPTLDPTYAQQLMSGCPRNVDPNIVLALDTQTEHTFDNLYYKNLVNGKGLLSSDQVLFTDGASRSTVVEFANDGSKFFDAFVVAIKKLGRVGVKTGKEGEIRRDCSKFN