AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene040455

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040455.t1 MTR_7g029030 96.562 320 11 0 1 320 1 320 0.0 639
MS.gene040455.t1 MTR_5g016010 58.282 326 127 4 1 317 1 326 2.67e-131 377
MS.gene040455.t1 MTR_4g095450 60.127 316 121 4 6 317 7 321 2.99e-131 377
MS.gene040455.t1 MTR_4g127670 58.086 303 119 3 24 320 23 323 6.68e-122 353
MS.gene040455.t1 MTR_1g009750 54.969 322 138 3 6 320 7 328 3.53e-121 351
MS.gene040455.t1 MTR_1g009750 50.938 320 137 4 6 320 7 311 5.81e-107 314
MS.gene040455.t1 MTR_4g087965 48.113 318 152 5 11 317 28 343 2.51e-93 281
MS.gene040455.t1 MTR_0286s0010 43.438 320 173 5 6 320 18 334 1.83e-90 273
MS.gene040455.t1 MTR_6g008075 43.438 320 173 5 6 320 18 334 1.83e-90 273
MS.gene040455.t1 MTR_8g062780 44.688 320 169 4 7 320 7 324 1.90e-90 273
MS.gene040455.t1 MTR_3g094650 43.574 319 173 4 5 320 8 322 2.72e-86 262
MS.gene040455.t1 MTR_1g090760 41.615 322 179 4 6 320 11 330 6.23e-86 262
MS.gene040455.t1 MTR_5g022870 43.034 323 169 9 4 320 3 316 4.58e-83 254
MS.gene040455.t1 MTR_3g105790 39.877 326 186 2 1 320 1 322 6.46e-82 251
MS.gene040455.t1 MTR_3g072190 41.304 322 183 4 1 320 1 318 2.42e-81 249
MS.gene040455.t1 MTR_1g025980 43.849 317 165 7 6 316 5 314 1.82e-80 247
MS.gene040455.t1 MTR_8g075100 45.364 302 151 8 25 320 26 319 7.76e-80 246
MS.gene040455.t1 MTR_2g088770 40.752 319 180 5 8 320 10 325 4.89e-79 244
MS.gene040455.t1 MTR_3g094670 43.574 319 173 4 5 320 8 322 6.67e-79 243
MS.gene040455.t1 MTR_3g466200 42.500 320 170 6 8 320 8 320 1.56e-78 242
MS.gene040455.t1 MTR_7g107520 41.975 324 177 6 3 320 2 320 1.65e-78 242
MS.gene040455.t1 MTR_5g074970 42.812 320 172 6 7 320 12 326 3.32e-78 242
MS.gene040455.t1 MTR_5g083860 41.875 320 177 5 4 320 12 325 5.42e-78 241
MS.gene040455.t1 MTR_4g046713 41.772 316 176 4 11 320 13 326 5.59e-78 241
MS.gene040455.t1 MTR_4g125940 42.368 321 175 4 8 320 11 329 1.50e-77 240
MS.gene040455.t1 MTR_3g092990 41.104 326 182 6 2 320 4 326 3.12e-77 239
MS.gene040455.t1 MTR_2g008710 40.854 328 175 8 4 320 6 325 8.76e-77 238
MS.gene040455.t1 MTR_7g086820 42.373 295 161 5 29 320 24 312 9.45e-77 238
MS.gene040455.t1 MTR_1g101830 42.006 319 173 7 8 320 10 322 1.30e-76 238
MS.gene040455.t1 MTR_1g038680 43.092 304 157 7 29 320 33 332 2.69e-76 237
MS.gene040455.t1 MTR_2g084090 39.752 322 188 4 1 320 1 318 7.93e-76 235
MS.gene040455.t1 MTR_3g094630 42.320 319 177 4 5 320 8 322 1.24e-75 235
MS.gene040455.t1 MTR_2g084080 40.125 319 182 4 7 320 3 317 1.64e-75 234
MS.gene040455.t1 MTR_1g054205 40.248 323 180 6 6 320 9 326 2.81e-75 234
MS.gene040455.t1 MTR_2g029815 45.401 337 160 13 1 320 1 330 2.92e-75 235
MS.gene040455.t1 MTR_7g086870 42.333 300 163 6 23 320 20 311 4.64e-75 233
MS.gene040455.t1 MTR_6g027440 41.640 317 177 5 7 320 3 314 1.02e-74 233
MS.gene040455.t1 MTR_4g029170 40.881 318 180 6 6 320 9 321 1.46e-74 232
MS.gene040455.t1 MTR_7g093370 40.881 318 177 6 12 320 56 371 3.05e-74 233
MS.gene040455.t1 MTR_4g029200 40.523 306 175 4 17 320 38 338 9.28e-74 231
MS.gene040455.t1 MTR_4g114210 40.123 324 180 5 6 320 2 320 2.03e-73 229
MS.gene040455.t1 MTR_2g029800 42.857 308 168 5 20 320 24 330 2.22e-73 230
MS.gene040455.t1 MTR_2g029830 42.122 311 166 5 20 320 23 329 3.32e-73 230
MS.gene040455.t1 MTR_2g084110 38.629 321 192 3 1 320 1 317 5.02e-73 228
MS.gene040455.t1 MTR_2g029750 43.871 310 162 8 20 320 24 330 1.20e-72 228
MS.gene040455.t1 MTR_2g040000 39.329 328 185 5 5 320 6 331 1.76e-72 227
MS.gene040455.t1 MTR_2g028980 42.073 328 168 7 4 320 14 330 3.60e-72 227
MS.gene040455.t1 MTR_7g072510 39.117 317 182 5 7 320 4 312 3.60e-72 226
MS.gene040455.t1 MTR_1g086320 39.692 325 180 7 8 320 13 333 4.09e-72 226
MS.gene040455.t1 MTR_1g077000 38.298 329 186 7 1 320 7 327 4.16e-72 226
MS.gene040455.t1 MTR_5g021060 42.715 302 166 4 25 320 30 330 6.33e-72 226
MS.gene040455.t1 MTR_4g029180 41.216 296 167 5 28 320 30 321 8.00e-72 225
MS.gene040455.t1 MTR_2g029820 41.265 332 181 6 1 320 1 330 9.82e-72 226
MS.gene040455.t1 MTR_4g083710 39.375 320 185 6 7 320 8 324 1.16e-71 225
MS.gene040455.t1 MTR_5g017860 41.042 307 165 6 24 320 26 326 1.58e-71 224
MS.gene040455.t1 MTR_2g084020 38.820 322 191 4 1 320 1 318 1.74e-71 224
MS.gene040455.t1 MTR_2g084010 38.509 322 192 4 1 320 1 318 2.68e-71 224
MS.gene040455.t1 MTR_5g017850 38.415 328 185 6 2 320 7 326 3.04e-71 224
MS.gene040455.t1 MTR_3g467600 41.284 327 180 8 1 320 3 324 7.19e-71 223
MS.gene040455.t1 MTR_2g029730 41.033 329 182 5 1 320 1 326 2.06e-70 222
MS.gene040455.t1 MTR_2g029860 41.100 309 168 4 22 320 26 330 4.36e-70 222
MS.gene040455.t1 MTR_6g043460 38.318 321 185 5 5 316 8 324 5.39e-70 221
MS.gene040455.t1 MTR_0155s0040 38.924 316 184 6 6 320 8 315 7.21e-70 220
MS.gene040455.t1 MTR_2g029560 40.062 322 181 5 6 320 9 325 8.88e-70 221
MS.gene040455.t1 MTR_2g029850 41.042 307 175 3 20 320 24 330 1.06e-69 221
MS.gene040455.t1 MTR_7g072480 38.608 316 189 3 6 320 5 316 1.53e-69 219
MS.gene040455.t1 MTR_4g031140 39.062 320 184 6 6 320 11 324 1.58e-69 220
MS.gene040455.t1 MTR_4g030890 38.961 308 179 5 18 320 93 396 5.28e-69 221
MS.gene040455.t1 MTR_4g125940 45.055 273 140 4 56 320 4 274 1.07e-68 216
MS.gene040455.t1 MTR_2g029740 40.663 332 183 8 1 320 1 330 1.50e-68 218
MS.gene040455.t1 MTR_5g074860 39.752 322 182 8 3 318 8 323 2.05e-68 216
MS.gene040455.t1 MTR_2g084000 37.618 319 191 5 6 320 5 319 2.49e-68 216
MS.gene040455.t1 MTR_4g029190 38.835 309 179 6 17 320 37 340 4.36e-68 216
MS.gene040455.t1 MTR_3g092990 39.939 328 172 8 2 320 4 315 1.51e-67 214
MS.gene040455.t1 MTR_1g086490 38.602 329 179 7 11 320 16 340 1.55e-67 215
MS.gene040455.t1 MTR_3g466180 39.048 315 187 3 7 320 13 323 3.76e-67 213
MS.gene040455.t1 MTR_8g076820 39.404 302 176 4 25 320 30 330 5.28e-66 211
MS.gene040455.t1 MTR_2g029910 41.534 313 166 8 20 320 25 332 8.74e-66 211
MS.gene040455.t1 MTR_4g074995 39.815 324 163 8 13 320 1 308 1.04e-65 209
MS.gene040455.t1 MTR_3g072190 42.520 254 141 3 68 320 2 251 1.05e-65 207
MS.gene040455.t1 MTR_2g008160 39.550 311 176 5 18 320 17 323 1.41e-65 209
MS.gene040455.t1 MTR_1g066710 39.934 303 177 4 21 320 23 323 1.95e-65 209
MS.gene040455.t1 MTR_5g014100 39.228 311 177 5 21 320 22 331 5.58e-65 208
MS.gene040455.t1 MTR_6g043280 36.875 320 187 6 10 320 19 332 7.48e-65 207
MS.gene040455.t1 MTR_5g074760 40.248 323 181 9 5 320 4 321 2.17e-64 206
MS.gene040455.t1 MTR_4g122640 38.721 297 177 4 28 320 41 336 3.46e-64 206
MS.gene040455.t1 MTR_4g074990 37.618 319 174 6 9 320 5 305 5.25e-64 204
MS.gene040455.t1 MTR_7g026990 36.076 316 194 6 8 320 12 322 1.06e-63 204
MS.gene040455.t1 MTR_1g115900 37.846 325 191 8 1 320 3 321 2.49e-63 204
MS.gene040455.t1 MTR_6g043240 39.527 296 173 4 25 320 42 331 2.82e-63 204
MS.gene040455.t1 MTR_5g074740 39.319 323 184 9 5 320 4 321 4.06e-63 203
MS.gene040455.t1 MTR_1g066640 38.816 304 179 5 21 320 23 323 3.58e-62 201
MS.gene040455.t1 MTR_2g008730 37.117 326 166 8 4 320 6 301 8.24e-62 199
MS.gene040455.t1 MTR_3g105790 43.882 237 123 2 94 320 10 246 8.34e-62 197
MS.gene040455.t1 MTR_4g132490 34.483 319 201 4 6 320 13 327 9.14e-62 199
MS.gene040455.t1 MTR_2g029830 43.295 261 134 5 70 320 5 261 1.80e-61 197
MS.gene040455.t1 MTR_1g066380 37.500 304 183 5 21 320 23 323 3.56e-60 195
MS.gene040455.t1 MTR_5g074710 37.538 325 191 9 2 320 3 321 6.15e-60 194
MS.gene040455.t1 MTR_1g022970 37.217 309 174 4 25 320 46 347 2.79e-59 194
MS.gene040455.t1 MTR_2g067440 34.756 328 178 4 25 318 60 385 9.14e-59 194
MS.gene040455.t1 MTR_1g066680 38.487 304 179 6 21 320 23 322 9.47e-59 192
MS.gene040455.t1 MTR_2g099175 33.138 341 201 7 1 320 1 335 1.48e-58 191
MS.gene040455.t1 MTR_4g132110 35.185 324 197 7 7 320 8 328 3.98e-58 190
MS.gene040455.t1 MTR_4g132110 34.650 329 197 9 7 320 8 333 1.89e-56 186
MS.gene040455.t1 MTR_4g133800 38.721 297 167 6 30 320 46 333 1.99e-56 186
MS.gene040455.t1 MTR_4g074980 36.741 313 168 7 9 320 11 294 5.02e-56 184
MS.gene040455.t1 MTR_2g077990 35.045 331 176 5 25 318 76 404 1.40e-55 186
MS.gene040455.t1 MTR_2g078610 34.441 331 178 5 25 318 76 404 1.92e-55 186
MS.gene040455.t1 MTR_5g049280 33.934 333 200 9 5 320 8 337 1.18e-54 181
MS.gene040455.t1 MTR_4g074980 40.726 248 138 5 9 252 11 253 5.86e-54 177
MS.gene040455.t1 MTR_2g008160 36.364 308 155 5 18 320 17 288 7.66e-54 178
MS.gene040455.t1 MTR_5g033470 38.141 312 176 11 22 320 70 377 3.37e-52 176
MS.gene040455.t1 MTR_2g437770 35.570 298 178 6 28 320 53 341 1.63e-51 173
MS.gene040455.t1 MTR_2g078280 34.483 319 170 5 25 306 76 392 4.15e-50 171
MS.gene040455.t1 MTR_1g066380 37.891 256 152 5 69 320 3 255 9.08e-48 161
MS.gene040455.t1 MTR_2g067450 36.656 311 167 11 25 318 11 308 1.18e-47 162
MS.gene040455.t1 MTR_0147s0010 32.704 318 176 6 25 318 77 380 1.80e-44 156
MS.gene040455.t1 MTR_5g074860 33.540 322 163 8 3 318 8 284 1.87e-44 153
MS.gene040455.t1 MTR_3g072210 42.021 188 104 3 135 320 54 238 1.65e-43 149
MS.gene040455.t1 MTR_2g029880 42.632 190 93 5 137 320 9 188 1.52e-39 138
MS.gene040455.t1 MTR_5g074700 38.667 225 117 7 100 320 7 214 6.26e-38 134
MS.gene040455.t1 MTR_2g008160 40.884 181 103 3 18 198 17 193 1.19e-37 133
MS.gene040455.t1 MTR_7g086790 39.247 186 93 5 72 256 17 183 9.09e-32 117
MS.gene040455.t1 MTR_7g072490 32.787 244 105 6 71 313 2 187 2.05e-25 101
MS.gene040455.t1 MTR_5g058120 33.125 160 100 2 157 316 3 155 5.11e-23 96.3
MS.gene040455.t1 MTR_3g072260 39.844 128 73 3 8 132 7 133 7.23e-23 92.8
MS.gene040455.t1 MTR_2g077980 29.965 287 153 12 77 319 1 283 8.34e-23 96.3
MS.gene040455.t1 MTR_2g078560 28.311 219 122 4 136 319 101 319 1.57e-21 93.6
MS.gene040455.t1 MTR_4g031040 38.655 119 60 2 136 254 26 131 1.59e-20 86.3
MS.gene040455.t1 MTR_3g107060 26.692 266 149 6 45 305 92 316 8.11e-18 82.8
MS.gene040455.t1 MTR_5g022510 27.698 278 161 7 26 303 6 243 1.45e-17 81.6
MS.gene040455.t1 MTR_4g114220 42.222 90 42 2 45 134 23 102 1.19e-16 75.9
MS.gene040455.t1 MTR_1g098320 46.053 76 41 0 242 317 46 121 1.52e-16 75.5
MS.gene040455.t1 MTR_5g022510 28.139 231 133 5 73 303 21 218 6.72e-16 76.6
MS.gene040455.t1 MTR_6g048160 52.778 72 30 2 64 135 22 89 3.45e-15 70.5
MS.gene040455.t1 MTR_7g086810 30.769 130 57 2 13 142 1 97 6.78e-15 73.2
MS.gene040455.t1 MTR_1g089005 36.220 127 71 3 11 130 2 125 1.37e-14 70.5
MS.gene040455.t1 MTR_4g073410 28.000 250 133 8 60 303 36 244 3.39e-14 72.0
MS.gene040455.t1 MTR_7g107500 42.683 82 46 1 239 320 17 97 2.81e-13 65.5
MS.gene040455.t1 MTR_3g462850 31.884 138 83 5 189 316 9 145 1.47e-12 64.7
MS.gene040455.t1 MTR_7g086785 41.026 78 39 2 68 142 1 74 1.97e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040455.t1 AT5G14130 59.443 323 126 2 2 320 9 330 2.54e-138 395
MS.gene040455.t1 AT5G14130 59.813 321 123 3 4 320 53 371 6.88e-138 395
MS.gene040455.t1 AT4G37530 59.677 310 118 3 18 320 20 329 1.10e-129 373
MS.gene040455.t1 AT4G30170 58.882 304 116 3 23 320 25 325 5.14e-126 363
MS.gene040455.t1 AT4G37520 59.016 305 118 3 23 320 25 329 3.03e-125 362
MS.gene040455.t1 AT2G18980 57.233 318 126 4 9 320 10 323 1.12e-123 357
MS.gene040455.t1 AT4G37520 58.689 305 116 4 23 320 25 326 4.59e-122 353
MS.gene040455.t1 AT5G67400 54.489 323 139 4 6 320 7 329 1.88e-119 347
MS.gene040455.t1 AT3G49960 56.066 305 127 3 23 320 25 329 1.36e-116 340
MS.gene040455.t1 AT4G37530 60.536 261 96 3 18 271 20 280 1.39e-109 320
MS.gene040455.t1 AT5G47000 47.319 317 165 2 6 320 14 330 6.17e-101 300
MS.gene040455.t1 AT4G17690 48.377 308 154 4 16 320 17 322 7.59e-99 294
MS.gene040455.t1 AT5G40150 46.580 307 153 4 20 320 27 328 5.42e-92 277
MS.gene040455.t1 AT2G34060 44.590 305 160 4 24 319 41 345 1.32e-88 269
MS.gene040455.t1 AT1G24110 44.079 304 165 4 22 320 19 322 3.41e-88 267
MS.gene040455.t1 AT1G05260 42.901 324 174 5 6 320 4 325 8.38e-86 261
MS.gene040455.t1 AT3G28200 42.951 305 166 4 20 320 16 316 6.89e-85 258
MS.gene040455.t1 AT3G21770 42.345 307 169 4 17 317 21 325 7.20e-81 249
MS.gene040455.t1 AT5G05340 43.234 303 163 5 22 320 27 324 4.01e-79 244
MS.gene040455.t1 AT3G01190 41.304 322 177 6 5 320 6 321 7.23e-79 243
MS.gene040455.t1 AT4G31760 41.066 319 178 3 8 320 12 326 1.30e-78 243
MS.gene040455.t1 AT5G51890 41.587 315 171 7 6 313 7 315 1.66e-78 242
MS.gene040455.t1 AT1G14540 39.873 316 185 4 7 320 3 315 2.93e-78 241
MS.gene040455.t1 AT5G64120 43.390 295 159 4 29 320 39 328 3.36e-78 242
MS.gene040455.t1 AT5G39580 42.633 319 169 7 6 320 11 319 4.26e-77 239
MS.gene040455.t1 AT1G71695 42.617 298 167 4 25 320 44 339 4.25e-76 237
MS.gene040455.t1 AT2G24800 42.623 305 164 5 23 320 29 329 4.56e-76 236
MS.gene040455.t1 AT5G42180 40.764 314 173 7 11 318 9 315 5.06e-76 236
MS.gene040455.t1 AT4G11290 39.329 328 189 5 1 320 1 326 6.22e-76 236
MS.gene040455.t1 AT5G15180 41.751 297 165 4 29 320 36 329 1.76e-75 235
MS.gene040455.t1 AT4G36430 40.789 304 173 4 23 320 28 330 8.42e-75 233
MS.gene040455.t1 AT5G19880 39.634 328 186 5 2 320 5 329 9.96e-75 233
MS.gene040455.t1 AT5G17820 41.325 317 172 6 8 320 7 313 1.96e-74 231
MS.gene040455.t1 AT5G17820 41.325 317 172 6 8 320 60 366 1.53e-73 231
MS.gene040455.t1 AT1G14550 41.231 325 182 7 1 320 1 321 5.50e-73 228
MS.gene040455.t1 AT2G18140 38.602 329 187 5 6 320 8 335 8.93e-73 228
MS.gene040455.t1 AT2G18150 38.485 330 187 5 6 320 8 336 9.09e-73 228
MS.gene040455.t1 AT3G32980 40.777 309 173 5 21 320 27 334 1.11e-72 228
MS.gene040455.t1 AT3G50990 40.584 308 176 4 19 320 35 341 2.63e-72 227
MS.gene040455.t1 AT5G06720 39.117 317 185 5 11 320 18 333 2.73e-72 227
MS.gene040455.t1 AT5G58400 38.532 327 185 6 2 320 7 325 4.62e-72 226
MS.gene040455.t1 AT4G08770 41.026 312 174 5 18 320 17 327 4.09e-71 224
MS.gene040455.t1 AT5G06730 38.801 317 186 4 11 320 19 334 4.55e-71 224
MS.gene040455.t1 AT3G49110 41.234 308 171 5 22 320 30 336 6.32e-71 224
MS.gene040455.t1 AT2G38380 39.875 321 182 7 10 320 14 333 1.00e-70 223
MS.gene040455.t1 AT2G38390 40.323 310 176 6 19 320 25 333 1.35e-70 223
MS.gene040455.t1 AT5G66390 38.941 321 188 5 6 320 15 333 6.85e-70 221
MS.gene040455.t1 AT2G22420 38.318 321 183 8 6 320 8 319 1.20e-69 220
MS.gene040455.t1 AT4G08780 41.667 312 172 6 18 320 17 327 1.57e-69 220
MS.gene040455.t1 AT3G49120 41.042 307 171 5 23 320 30 335 2.53e-69 220
MS.gene040455.t1 AT5G58390 38.650 326 180 7 4 320 2 316 3.60e-69 218
MS.gene040455.t1 AT1G77100 39.498 319 183 6 7 320 6 319 1.15e-68 217
MS.gene040455.t1 AT2G41480 39.755 327 178 7 4 320 11 328 1.41e-68 217
MS.gene040455.t1 AT4G26010 39.490 314 177 7 10 320 6 309 2.95e-68 216
MS.gene040455.t1 AT4G26010 39.490 314 177 7 10 320 34 337 6.66e-68 216
MS.gene040455.t1 AT5G64110 40.468 299 165 5 29 320 38 330 1.09e-67 215
MS.gene040455.t1 AT4G33420 38.462 325 184 8 1 320 12 325 2.01e-67 214
MS.gene040455.t1 AT1G05240 38.562 306 169 6 24 317 24 322 3.12e-67 214
MS.gene040455.t1 AT1G05250 38.562 306 169 6 24 317 24 322 3.12e-67 214
MS.gene040455.t1 AT5G19890 39.623 318 177 7 12 320 16 327 6.43e-67 213
MS.gene040455.t1 AT4G33420 38.462 325 184 8 1 320 59 372 8.21e-67 214
MS.gene040455.t1 AT3G03670 37.695 321 187 5 8 320 6 321 1.23e-66 212
MS.gene040455.t1 AT4G25980 37.920 327 187 7 3 320 7 326 2.15e-65 209
MS.gene040455.t1 AT1G34510 38.562 306 176 6 17 320 14 309 1.04e-64 206
MS.gene040455.t1 AT2G35380 37.725 334 190 6 3 320 4 335 3.51e-63 203
MS.gene040455.t1 AT2G37130 37.864 309 186 5 16 320 21 327 4.82e-63 203
MS.gene040455.t1 AT4G33870 34.473 351 185 7 8 318 54 399 2.46e-62 203
MS.gene040455.t1 AT4G21960 35.423 319 199 5 6 320 12 327 5.29e-62 200
MS.gene040455.t1 AT1G49570 39.394 297 169 6 29 316 52 346 3.09e-61 199
MS.gene040455.t1 AT2G37130 38.047 297 178 5 28 320 2 296 4.10e-61 197
MS.gene040455.t1 AT2G43480 35.714 308 181 6 24 320 34 335 1.74e-60 196
MS.gene040455.t1 AT4G16270 40.000 300 167 8 29 320 54 348 2.24e-60 197
MS.gene040455.t1 AT2G39040 37.942 311 178 7 22 320 43 350 5.65e-59 193
MS.gene040455.t1 AT5G24070 35.806 310 178 7 24 320 34 335 8.23e-59 192
MS.gene040455.t1 AT5G22410 36.164 318 184 9 11 316 11 321 1.48e-57 189
MS.gene040455.t1 AT1G44970 37.624 303 181 4 25 320 45 346 9.25e-57 187
MS.gene040455.t1 AT1G68850 34.821 336 201 10 1 320 2 335 8.33e-56 184
MS.gene040455.t1 AT1G30870 38.333 300 170 6 28 320 54 345 1.18e-53 179
MS.gene040455.t1 AT3G17070 34.936 312 188 8 19 320 33 339 1.30e-52 176
MS.gene040455.t1 AT5G64100 34.783 299 180 6 29 320 41 331 2.06e-52 176
MS.gene040455.t1 AT2G35380 38.618 246 140 3 85 320 3 247 1.06e-46 158
MS.gene040455.t1 AT3G17070 34.164 281 168 9 50 320 3 276 2.14e-41 145
MS.gene040455.t1 AT5G39580 41.753 194 103 5 6 199 11 194 2.11e-40 141
MS.gene040455.t1 AT2G24800 43.452 168 91 3 23 190 29 192 2.11e-36 131
MS.gene040455.t1 AT4G25980 37.566 189 108 5 13 196 55 238 1.37e-30 117
MS.gene040455.t1 AT4G32320 29.348 276 129 10 45 305 101 325 3.10e-17 81.3
MS.gene040455.t1 AT4G35970 29.317 249 130 9 60 303 34 241 2.80e-16 78.2
MS.gene040455.t1 AT3G42570 32.203 118 74 3 79 192 34 149 8.51e-14 68.2
MS.gene040455.t1 AT4G35970 32.867 143 86 5 60 201 34 167 1.10e-11 63.9

Find 63 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATAAGAATAGTATTTA+TGG 0.165591 7.2:+70533938 MS.gene040455:CDS
TGCTTCTACATTTGATGCTT+TGG 0.242942 7.2:-70537326 None:intergenic
TGTTTCATGTGCAGACATTT+TGG 0.257385 7.2:+70536272 MS.gene040455:CDS
ATGTTTGGGTCAACATTTCT+AGG 0.278676 7.2:-70537553 None:intergenic
CGTAGAAATTCTCTACTAAT+TGG 0.280392 7.2:-70534001 None:intergenic
AGTATTTATGGCTTTGGTTA+TGG 0.289667 7.2:+70533950 MS.gene040455:CDS
TTGCCCTAACGTTGAACTTT+TGG 0.291803 7.2:+70534031 MS.gene040455:CDS
AAGAATAGTATTTATGGCTT+TGG 0.319041 7.2:+70533944 MS.gene040455:CDS
TTCAGATTGAAAGTTGGTTT+TGG 0.324237 7.2:-70537355 None:intergenic
AGTATAAACGGTTTGTGAAT+TGG 0.357121 7.2:-70537471 None:intergenic
AAAATTTGGTTAATGGAAAA+GGG 0.363734 7.2:+70537629 MS.gene040455:CDS
TCAAGGGCAAGCACAATGTT+TGG 0.369951 7.2:-70537568 None:intergenic
TTAAGAAGCTTGGAAGAGTT+GGG 0.378933 7.2:+70537758 MS.gene040455:CDS
ATTGCCACTAGAGACGTTAT+AGG 0.387236 7.2:+70536297 MS.gene040455:CDS
CCATCATTCAGCGTTGAACT+TGG 0.406147 7.2:+70537283 MS.gene040455:CDS
GTTATGATTGCTTCACCAAA+TGG 0.413414 7.2:+70536147 MS.gene040455:CDS
CTGGTAAAGAGGGAGAGATT+AGG 0.424247 7.2:+70537788 MS.gene040455:CDS
TATGTTCAGTTTGAGTATCA+AGG 0.429040 7.2:-70537585 None:intergenic
GCCTTCTCCACTAGTTATGA+TGG 0.437798 7.2:-70533979 None:intergenic
ATTAAGAAGCTTGGAAGAGT+TGG 0.444109 7.2:+70537757 MS.gene040455:CDS
CACTAGAGACGTTATAGGCT+TGG 0.445107 7.2:+70536302 MS.gene040455:CDS
TATGCTCAACAATTAATGTC+AGG 0.456860 7.2:+70537526 MS.gene040455:CDS
CAAGGGCAAGCACAATGTTT+GGG 0.460589 7.2:-70537567 None:intergenic
TCTGCACATGAAACAACTCC+TGG 0.462369 7.2:-70536264 None:intergenic
ATTAATTGTTGAGCATAGGT+TGG 0.472311 7.2:-70537520 None:intergenic
GCCACCAAAAGTTCAACGTT+AGG 0.475815 7.2:-70534035 None:intergenic
TTAATTGTTGAGCATAGGTT+GGG 0.481417 7.2:-70537519 None:intergenic
ATCACGAGTGGACCCCACTT+TGG 0.481577 7.2:+70537495 MS.gene040455:CDS
GTTGTGGCTATTAAGAAGCT+TGG 0.487566 7.2:+70537748 MS.gene040455:CDS
AAAGACATGATTGCACTCTC+AGG 0.491221 7.2:+70537418 MS.gene040455:CDS
GTTGTTGAATTTGCTAATGA+TGG 0.496192 7.2:+70537703 MS.gene040455:CDS
AGTTGATTCAGATTGAAAGT+TGG 0.496537 7.2:-70537361 None:intergenic
CCACTCGTGATGAGTATAAA+CGG 0.498218 7.2:-70537483 None:intergenic
CCACCAAAAGTTCAACGTTA+GGG 0.508842 7.2:-70534034 None:intergenic
AATCTTTCCCTACCAGGAGA+TGG 0.510125 7.2:+70536195 MS.gene040455:CDS
CCAAGTTCAACGCTGAATGA+TGG 0.524275 7.2:-70537283 None:intergenic
TGTCAAATCCATCTCCTGGT+AGG 0.544847 7.2:-70536203 None:intergenic
AAGGAAAATCTTTCCCTACC+AGG 0.546274 7.2:+70536189 MS.gene040455:CDS
ACCATCATAACTAGTGGAGA+AGG 0.549367 7.2:+70533978 MS.gene040455:CDS
GCAGTGGAAGCTGTTTGCCC+AGG 0.549442 7.2:+70536246 MS.gene040455:CDS
ACAGTGTCAAATCCATCTCC+TGG 0.549652 7.2:-70536207 None:intergenic
TGTTTGGGTCAACATTTCTA+GGG 0.551420 7.2:-70537552 None:intergenic
TTTGCATGATTGCTTTGTTG+AGG 0.551879 7.2:+70534121 MS.gene040455:CDS
ATGTTCAGTTTGAGTATCAA+GGG 0.552125 7.2:-70537584 None:intergenic
TGATGGTGCTTCAAGATCTA+CGG 0.553070 7.2:+70537681 MS.gene040455:CDS
TGACATTAATTGTTGAGCAT+AGG 0.558462 7.2:-70537524 None:intergenic
GTCAAATCCATCTCCTGGTA+GGG 0.558901 7.2:-70536202 None:intergenic
ATTCTTTGATGCATTTGTTG+TGG 0.559042 7.2:+70537732 MS.gene040455:CDS
GCATAGGTTGGGTCCAAAGT+GGG 0.561258 7.2:-70537508 None:intergenic
AACTATGTATCACAGCTTGG+AGG 0.574132 7.2:+70537259 MS.gene040455:intron
TTTACACAAACTATCACCAC+TGG 0.575719 7.2:+70534077 MS.gene040455:CDS
AGCATAGGTTGGGTCCAAAG+TGG 0.591518 7.2:-70537509 None:intergenic
TAAGAAGCTTGGAAGAGTTG+GGG 0.593331 7.2:+70537759 MS.gene040455:CDS
CTGCACATGAAACAACTCCT+GGG 0.618931 7.2:-70536263 None:intergenic
ATGCTCAACAATTAATGTCA+GGG 0.619021 7.2:+70537527 MS.gene040455:CDS
GTTGAACTTGGACGTAGAGA+CGG 0.623890 7.2:+70537295 MS.gene040455:CDS
GTCACAATGTGAGAATCCTA+CGG 0.630778 7.2:-70537449 None:intergenic
CATAGGTTGGGTCCAAAGTG+GGG 0.641266 7.2:-70537507 None:intergenic
CAAGCCTATAACGTCTCTAG+TGG 0.645652 7.2:-70536301 None:intergenic
GATTAAAGCAAAGCAAGCAG+TGG 0.655619 7.2:+70536230 MS.gene040455:CDS
CCGTTTATACTCATCACGAG+TGG 0.675398 7.2:+70537483 MS.gene040455:CDS
CTCTCAGGAGCACACACCGT+AGG 0.708348 7.2:+70537433 MS.gene040455:CDS
ACGAAGAGTAGCTTGTCCAG+TGG 0.713638 7.2:-70534093 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAATAAATAAATAA+TGG - chr7.2:70535674-70535693 None:intergenic 0.0%
!! CAATTAATTTAAAAATGATT+TGG + chr7.2:70536079-70536098 MS.gene040455:intron 10.0%
!!! AAAAAAATGTATTTTGAATT+TGG + chr7.2:70535726-70535745 MS.gene040455:intron 10.0%
!!! ATTGATTTTTACTTAATTTT+AGG - chr7.2:70536399-70536418 None:intergenic 10.0%
!!! CAAATCATTTTTAAATTAAT+TGG - chr7.2:70536081-70536100 None:intergenic 10.0%
!!! GTAATTTTGTTATAAAATAA+GGG - chr7.2:70536372-70536391 None:intergenic 10.0%
!!! TAAAATTGACTTTTTTTTAT+GGG + chr7.2:70537056-70537075 MS.gene040455:intron 10.0%
!!! TAATTTGTATTACAAAAATT+TGG + chr7.2:70537615-70537634 MS.gene040455:CDS 10.0%
!!! TGTAATTTTGTTATAAAATA+AGG - chr7.2:70536373-70536392 None:intergenic 10.0%
!!! TTGATTTTTACTTAATTTTA+GGG - chr7.2:70536398-70536417 None:intergenic 10.0%
!! AAAATACTCTTTAATTAGTT+TGG - chr7.2:70537004-70537023 None:intergenic 15.0%
!! AAATAAAAAATAAACTCTTG+TGG - chr7.2:70536435-70536454 None:intergenic 15.0%
!! AACTATAAAAAAATTAGTAG+TGG - chr7.2:70535061-70535080 None:intergenic 15.0%
!! AATAAAAAATAAACTCTTGT+GGG - chr7.2:70536434-70536453 None:intergenic 15.0%
!! ATAAAGAGTTTAATGAATTA+AGG - chr7.2:70536042-70536061 None:intergenic 15.0%
!! GAAAATAAGAATAGTATTTA+TGG + chr7.2:70533938-70533957 MS.gene040455:CDS 15.0%
!! TAAAGAGTTTAATGAATTAA+GGG - chr7.2:70536041-70536060 None:intergenic 15.0%
!! TATTACAAAAATTTGGTTAA+TGG + chr7.2:70537622-70537641 MS.gene040455:CDS 15.0%
!! TTATAACCTTAAGAAAAATT+AGG + chr7.2:70535767-70535786 MS.gene040455:intron 15.0%
!! TTATTAAAATGTGACATATT+TGG - chr7.2:70536500-70536519 None:intergenic 15.0%
!! TTGAAAATATATACTAAATG+AGG - chr7.2:70534195-70534214 None:intergenic 15.0%
!! TTTCTCAGAATTAAAAAAAT+TGG - chr7.2:70536725-70536744 None:intergenic 15.0%
!!! AAATATTTAATTTTCAATGC+TGG + chr7.2:70535509-70535528 MS.gene040455:intron 15.0%
!!! ATGACTTGTATAAAAAAAAA+AGG + chr7.2:70536544-70536563 MS.gene040455:intron 15.0%
!!! GTAAAATTGACTTTTTTTTA+TGG + chr7.2:70537055-70537074 MS.gene040455:intron 15.0%
!!! TAAGTAAATTTTGACTTTTT+AGG - chr7.2:70534903-70534922 None:intergenic 15.0%
!!! TATAGTATTTTCCTTTTTTT+TGG - chr7.2:70536938-70536957 None:intergenic 15.0%
!!! TGCTTCTTATTTTTTTTTTT+TGG + chr7.2:70537161-70537180 MS.gene040455:intron 15.0%
!!! TTAAACTCTTTATTTCAAAT+TGG + chr7.2:70536049-70536068 MS.gene040455:intron 15.0%
!! AAAAATTTGGTTAATGGAAA+AGG + chr7.2:70537628-70537647 MS.gene040455:CDS 20.0%
!! AAAATTTGGTTAATGGAAAA+GGG + chr7.2:70537629-70537648 MS.gene040455:CDS 20.0%
!! AACACAAAATTAATACAACT+TGG + chr7.2:70535306-70535325 MS.gene040455:intron 20.0%
!! AATTTACTTATAATAGTGAC+CGG + chr7.2:70534913-70534932 MS.gene040455:intron 20.0%
!! ATTCTTGAATACCAAAAAAA+AGG + chr7.2:70536924-70536943 MS.gene040455:intron 20.0%
!! GAACAAAATTTAAACAGAAA+TGG - chr7.2:70537198-70537217 None:intergenic 20.0%
!! TCTTCATATATATGTATGTA+TGG + chr7.2:70534250-70534269 MS.gene040455:intron 20.0%
!! TTAACAAGTTAAAGATGAAT+TGG - chr7.2:70535021-70535040 None:intergenic 20.0%
!! TTATCAAAATAAACTCTTGT+GGG - chr7.2:70536470-70536489 None:intergenic 20.0%
!! TTGTTTCAATAAAGAAAACT+CGG + chr7.2:70536567-70536586 MS.gene040455:intron 20.0%
!! TTTATCAAAATAAACTCTTG+TGG - chr7.2:70536471-70536490 None:intergenic 20.0%
!!! AAACAAAACCAAATCAATTT+TGG - chr7.2:70535367-70535386 None:intergenic 20.0%
!!! ATATTTTTTTGCACAAAATC+AGG - chr7.2:70535495-70535514 None:intergenic 20.0%
!!! ATTGTCAAACTCATTTTTTT+AGG + chr7.2:70536601-70536620 MS.gene040455:intron 20.0%
!!! GAAACTTTTATAAGATCTTT+AGG + chr7.2:70534486-70534505 MS.gene040455:intron 20.0%
!!! TCTTTAACTTGTTAAGATAA+TGG + chr7.2:70535026-70535045 MS.gene040455:intron 20.0%
!!! TGTTATTTTCAAACTATGTT+TGG + chr7.2:70536773-70536792 MS.gene040455:intron 20.0%
!!! TTAATGAACTTTTAAGTGAA+AGG + chr7.2:70534344-70534363 MS.gene040455:intron 20.0%
! AAAAACACAAATAAGCCAAA+AGG + chr7.2:70535615-70535634 MS.gene040455:intron 25.0%
! AAAACACAAATAAGCCAAAA+GGG + chr7.2:70535616-70535635 MS.gene040455:intron 25.0%
! AAATTTGCATTAACGATGTA+TGG + chr7.2:70534578-70534597 MS.gene040455:intron 25.0%
! AAGAATAGTATTTATGGCTT+TGG + chr7.2:70533944-70533963 MS.gene040455:CDS 25.0%
! AGATCATCTGTTATATGATA+TGG - chr7.2:70534651-70534670 None:intergenic 25.0%
! ATGAGTAAATCAGAACAAAA+CGG + chr7.2:70535943-70535962 MS.gene040455:intron 25.0%
! ATGTATAGTTGAAATCTGAA+TGG + chr7.2:70535975-70535994 MS.gene040455:intron 25.0%
! ATTAACGATGTATGGAAAAT+TGG + chr7.2:70534586-70534605 MS.gene040455:intron 25.0%
! CATTCAATAAATGATGTATG+TGG + chr7.2:70534839-70534858 MS.gene040455:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr7.2:70534858-70534839 None:intergenic 25.0%
! CTAACATGATTTCATAAAAC+TGG + chr7.2:70534720-70534739 MS.gene040455:intron 25.0%
! GAAACAATTCAATAACTATG+AGG - chr7.2:70534291-70534310 None:intergenic 25.0%
! TAATCTTAGATGAACAAGAA+AGG - chr7.2:70536893-70536912 None:intergenic 25.0%
! TGGTATTCAAGAATAATTGA+AGG - chr7.2:70536918-70536937 None:intergenic 25.0%
! TGTATAGTTGAAATCTGAAT+GGG + chr7.2:70535976-70535995 MS.gene040455:intron 25.0%
! TTATCCAATTATTAGTTCAC+AGG - chr7.2:70535587-70535606 None:intergenic 25.0%
!! CTTTTATTCAATACTCCTTA+CGG + chr7.2:70534782-70534801 MS.gene040455:intron 25.0%
!! GAATGGATTTCAAGAATTAT+GGG + chr7.2:70535998-70536017 MS.gene040455:intron 25.0%
!! TAGTGTATAAATTTCCCTTT+TGG - chr7.2:70535633-70535652 None:intergenic 25.0%
!! TCAAATTTGAAACTTTGAGA+AGG - chr7.2:70537109-70537128 None:intergenic 25.0%
!!! AAAGAACAATTTTGATGTGT+AGG + chr7.2:70536110-70536129 MS.gene040455:intron 25.0%
!!! AAGAACAATTTTGATGTGTA+GGG + chr7.2:70536111-70536130 MS.gene040455:intron 25.0%
!!! ATTTCATAAAACTGGTTTGT+GGG + chr7.2:70534728-70534747 MS.gene040455:intron 25.0%
!!! TAAGATCTTTAGGACTTTTA+TGG + chr7.2:70534496-70534515 MS.gene040455:intron 25.0%
!!! TCGTTAATGCAAATTTTTAG+TGG - chr7.2:70534574-70534593 None:intergenic 25.0%
AATTGCTGCCAAAATTGATT+TGG + chr7.2:70535356-70535375 MS.gene040455:intron 30.0%
AGTATAAACGGTTTGTGAAT+TGG - chr7.2:70537474-70537493 None:intergenic 30.0%
ATGCTCAACAATTAATGTCA+GGG + chr7.2:70537527-70537546 MS.gene040455:CDS 30.0%
ATGTATGTGGTCTATATTGT+AGG - chr7.2:70534865-70534884 None:intergenic 30.0%
ATGTTCAGTTTGAGTATCAA+GGG - chr7.2:70537587-70537606 None:intergenic 30.0%
ATGTTCGATGTCAATTTGAA+GGG + chr7.2:70537131-70537150 MS.gene040455:intron 30.0%
ATTAATTGTTGAGCATAGGT+TGG - chr7.2:70537523-70537542 None:intergenic 30.0%
ATTCTTCCTATATGTATGTG+TGG + chr7.2:70534383-70534402 MS.gene040455:intron 30.0%
ATTGAACCACACATACATAT+AGG - chr7.2:70534392-70534411 None:intergenic 30.0%
CGTAGAAATTCTCTACTAAT+TGG - chr7.2:70534004-70534023 None:intergenic 30.0%
TATATGATCATTGATCATCG+AGG - chr7.2:70534317-70534336 None:intergenic 30.0%
TATGCTCAACAATTAATGTC+AGG + chr7.2:70537526-70537545 MS.gene040455:CDS 30.0%
TATGTTCAGTTTGAGTATCA+AGG - chr7.2:70537588-70537607 None:intergenic 30.0%
TATGTTCGATGTCAATTTGA+AGG + chr7.2:70537130-70537149 MS.gene040455:intron 30.0%
TCTAGACGTGTTTATTATTC+AGG - chr7.2:70535872-70535891 None:intergenic 30.0%
TCTATTAAAGAGTCTCACAT+TGG - chr7.2:70535906-70535925 None:intergenic 30.0%
TGACATTAATTGTTGAGCAT+AGG - chr7.2:70537527-70537546 None:intergenic 30.0%
TTAATTGTTGAGCATAGGTT+GGG - chr7.2:70537522-70537541 None:intergenic 30.0%
TTGAAACTAAATTGAATCGC+TGG - chr7.2:70534983-70535002 None:intergenic 30.0%
! AACACTATTTTCTCCAAACA+CGG + chr7.2:70537385-70537404 MS.gene040455:CDS 30.0%
! AATTTTATGGGGTTGTGTTA+AGG - chr7.2:70535828-70535847 None:intergenic 30.0%
! ACCTCACAAGTCAATTTTAT+GGG - chr7.2:70535840-70535859 None:intergenic 30.0%
! AGTTGATTCAGATTGAAAGT+TGG - chr7.2:70537364-70537383 None:intergenic 30.0%
! ATTCTTTGATGCATTTGTTG+TGG + chr7.2:70537732-70537751 MS.gene040455:CDS 30.0%
! GGAATGGATTTCAAGAATTA+TGG + chr7.2:70535997-70536016 MS.gene040455:intron 30.0%
!! AGTATTTATGGCTTTGGTTA+TGG + chr7.2:70533950-70533969 MS.gene040455:CDS 30.0%
!! GATTTCATAAAACTGGTTTG+TGG + chr7.2:70534727-70534746 MS.gene040455:intron 30.0%
!! GTTGTTGAATTTGCTAATGA+TGG + chr7.2:70537703-70537722 MS.gene040455:CDS 30.0%
!! TTCAGATTGAAAGTTGGTTT+TGG - chr7.2:70537358-70537377 None:intergenic 30.0%
!!! AATAGATTTTTTCCCACGTT+CGG + chr7.2:70535920-70535939 MS.gene040455:intron 30.0%
!!! GATCAAGTTTTATTCACTGA+TGG + chr7.2:70537664-70537683 MS.gene040455:CDS 30.0%
!!! GTTTGGTTTGTTAATTTTCC+TGG + chr7.2:70536790-70536809 MS.gene040455:intron 30.0%
!!! TGACTTTTTTTTATGGGTGT+TGG + chr7.2:70537062-70537081 MS.gene040455:intron 30.0%
AAAAATTAGGCCTCGAGTAT+TGG + chr7.2:70535780-70535799 MS.gene040455:intron 35.0%
AAGATTGAATTAGAGCTGCT+AGG + chr7.2:70535122-70535141 MS.gene040455:intron 35.0%
ACTCTATTTCACTCAACTGT+TGG + chr7.2:70535550-70535569 MS.gene040455:intron 35.0%
AGATGCAGAAAAAGATGCAA+AGG + chr7.2:70536170-70536189 MS.gene040455:CDS 35.0%
AGTTGAAATCTGAATGGGAA+TGG + chr7.2:70535981-70536000 MS.gene040455:intron 35.0%
ATCTTATCTTACCGTTCAGT+TGG + chr7.2:70534695-70534714 MS.gene040455:intron 35.0%
ATGTTTGGGTCAACATTTCT+AGG - chr7.2:70537556-70537575 None:intergenic 35.0%
ATTAAGAAGCTTGGAAGAGT+TGG + chr7.2:70537757-70537776 MS.gene040455:CDS 35.0%
ATTTCAAGAATTATGGGAGG+TGG + chr7.2:70536004-70536023 MS.gene040455:intron 35.0%
CAAGCAAATTCTTATGACGT+GGG - chr7.2:70535257-70535276 None:intergenic 35.0%
CACTCCTGTGAACTAATAAT+TGG + chr7.2:70535580-70535599 MS.gene040455:intron 35.0%
CGATGTATGGAAAATTGGAA+TGG + chr7.2:70534591-70534610 MS.gene040455:intron 35.0%
CGTATTTACGATTAAGACCT+AGG - chr7.2:70534547-70534566 None:intergenic 35.0%
GTTATGATTGCTTCACCAAA+TGG + chr7.2:70536147-70536166 MS.gene040455:CDS 35.0%
TACTGTAGCCAAGTAATTTG+TGG - chr7.2:70535464-70535483 None:intergenic 35.0%
TACTTATAATAGTGACCGGT+GGG + chr7.2:70534917-70534936 MS.gene040455:intron 35.0%
TCATGTTAGTTCCAACTGAA+CGG - chr7.2:70534709-70534728 None:intergenic 35.0%
TGCTTATAATACTGACCGTA+AGG - chr7.2:70534800-70534819 None:intergenic 35.0%
TGCTTCTACATTTGATGCTT+TGG - chr7.2:70537329-70537348 None:intergenic 35.0%
TGGATTTCAAGAATTATGGG+AGG + chr7.2:70536001-70536020 MS.gene040455:intron 35.0%
TGTTTGGGTCAACATTTCTA+GGG - chr7.2:70537555-70537574 None:intergenic 35.0%
TTAAGAAGCTTGGAAGAGTT+GGG + chr7.2:70537758-70537777 MS.gene040455:CDS 35.0%
TTACTTATAATAGTGACCGG+TGG + chr7.2:70534916-70534935 MS.gene040455:intron 35.0%
TTCAACTATGTATCACAGCT+TGG + chr7.2:70537256-70537275 MS.gene040455:intron 35.0%
TTGAGAAGGATCATACTTCA+AGG - chr7.2:70537095-70537114 None:intergenic 35.0%
TTTACACAAACTATCACCAC+TGG + chr7.2:70534077-70534096 MS.gene040455:CDS 35.0%
TTTCAAGAATTATGGGAGGT+GGG + chr7.2:70536005-70536024 MS.gene040455:intron 35.0%
! ACTGTAGCCAAGTAATTTGT+GGG - chr7.2:70535463-70535482 None:intergenic 35.0%
! AGAGTGCAATCATGTCTTTT+TGG - chr7.2:70537417-70537436 None:intergenic 35.0%
! CACCTCACAAGTCAATTTTA+TGG - chr7.2:70535841-70535860 None:intergenic 35.0%
! CCTCACAAGTCAATTTTATG+GGG - chr7.2:70535839-70535858 None:intergenic 35.0%
! GCTTTTACCATCATAACTAG+TGG + chr7.2:70533972-70533991 MS.gene040455:CDS 35.0%
! TCGAGGCCTAATTTTTCTTA+AGG - chr7.2:70535776-70535795 None:intergenic 35.0%
! TCTTTTTCTGCATCTCCATT+TGG - chr7.2:70536165-70536184 None:intergenic 35.0%
! TGTTTCATGTGCAGACATTT+TGG + chr7.2:70536272-70536291 MS.gene040455:CDS 35.0%
! TTTGCATGATTGCTTTGTTG+AGG + chr7.2:70534121-70534140 MS.gene040455:CDS 35.0%
!!! ATCTTTAGGACTTTTATGGC+CGG + chr7.2:70534500-70534519 MS.gene040455:intron 35.0%
!!! CAATCATGTCTTTTTGGCTT+AGG - chr7.2:70537411-70537430 None:intergenic 35.0%
!!! GATTGAAAGTTGGTTTTGGA+AGG - chr7.2:70537354-70537373 None:intergenic 35.0%
AAAGACATGATTGCACTCTC+AGG + chr7.2:70537418-70537437 MS.gene040455:CDS 40.0%
AAAGAGTTTCATACTCCCAC+CGG - chr7.2:70534935-70534954 None:intergenic 40.0%
AACTATGTATCACAGCTTGG+AGG + chr7.2:70537259-70537278 MS.gene040455:intron 40.0%
AAGGAAAATCTTTCCCTACC+AGG + chr7.2:70536189-70536208 MS.gene040455:CDS 40.0%
AATGTTATCTCGTGTCTCTG+AGG - chr7.2:70536348-70536367 None:intergenic 40.0%
ACCATCATAACTAGTGGAGA+AGG + chr7.2:70533978-70533997 MS.gene040455:CDS 40.0%
ATTGCCACTAGAGACGTTAT+AGG + chr7.2:70536297-70536316 MS.gene040455:CDS 40.0%
CCACCAAAAGTTCAACGTTA+GGG - chr7.2:70534037-70534056 None:intergenic 40.0%
CCACTCGTGATGAGTATAAA+CGG - chr7.2:70537486-70537505 None:intergenic 40.0%
GATTAAAGCAAAGCAAGCAG+TGG + chr7.2:70536230-70536249 MS.gene040455:CDS 40.0%
GCAAGCAAATTCTTATGACG+TGG - chr7.2:70535258-70535277 None:intergenic 40.0%
GGGGTAAAAACTGGTAAAGA+GGG + chr7.2:70537778-70537797 MS.gene040455:CDS 40.0%
GTCACAATGTGAGAATCCTA+CGG - chr7.2:70537452-70537471 None:intergenic 40.0%
GTTGTGGCTATTAAGAAGCT+TGG + chr7.2:70537748-70537767 MS.gene040455:CDS 40.0%
TAAGAAGCTTGGAAGAGTTG+GGG + chr7.2:70537759-70537778 MS.gene040455:CDS 40.0%
TCCTAAACCAAGGGATTTAG+TGG - chr7.2:70535437-70535456 None:intergenic 40.0%
TCTAAGAAAGCCAATACTCG+AGG - chr7.2:70535793-70535812 None:intergenic 40.0%
TGATCATTGATCATCGAGGA+TGG - chr7.2:70534313-70534332 None:intergenic 40.0%
TGATTTACTCATCCGAACGT+GGG - chr7.2:70535935-70535954 None:intergenic 40.0%
TGGGGTAAAAACTGGTAAAG+AGG + chr7.2:70537777-70537796 MS.gene040455:CDS 40.0%
! CTGTAGCCAAGTAATTTGTG+GGG - chr7.2:70535462-70535481 None:intergenic 40.0%
! GGCTTACTCTTCTTTTTCCT+AGG + chr7.2:70534527-70534546 MS.gene040455:intron 40.0%
! TGATGGTGCTTCAAGATCTA+CGG + chr7.2:70537681-70537700 MS.gene040455:CDS 40.0%
! TTGCCCTAACGTTGAACTTT+TGG + chr7.2:70534031-70534050 MS.gene040455:CDS 40.0%
!! CCCCATAAAATTGACTTGTG+AGG + chr7.2:70535836-70535855 MS.gene040455:intron 40.0%
!! TCATAAAACTGGTTTGTGGG+TGG + chr7.2:70534731-70534750 MS.gene040455:intron 40.0%
AAAGAAGAGTAAGCCTCCAC+CGG - chr7.2:70534522-70534541 None:intergenic 45.0%
AATCTTTCCCTACCAGGAGA+TGG + chr7.2:70536195-70536214 MS.gene040455:CDS 45.0%
ACAGTGTCAAATCCATCTCC+TGG - chr7.2:70536210-70536229 None:intergenic 45.0%
AGGACTCCCCACAAATTACT+TGG + chr7.2:70535453-70535472 MS.gene040455:intron 45.0%
CAAGCCTATAACGTCTCTAG+TGG - chr7.2:70536304-70536323 None:intergenic 45.0%
CAAGGGCAAGCACAATGTTT+GGG - chr7.2:70537570-70537589 None:intergenic 45.0%
CACTAGAGACGTTATAGGCT+TGG + chr7.2:70536302-70536321 MS.gene040455:CDS 45.0%
CCAAGTTCAACGCTGAATGA+TGG - chr7.2:70537286-70537305 None:intergenic 45.0%
CCGTTTATACTCATCACGAG+TGG + chr7.2:70537483-70537502 MS.gene040455:CDS 45.0%
CTCTTAGCCACTAAATCCCT+TGG + chr7.2:70535427-70535446 MS.gene040455:intron 45.0%
CTGATTTACTCATCCGAACG+TGG - chr7.2:70535936-70535955 None:intergenic 45.0%
CTGCACATGAAACAACTCCT+GGG - chr7.2:70536266-70536285 None:intergenic 45.0%
CTGGTAAAGAGGGAGAGATT+AGG + chr7.2:70537788-70537807 MS.gene040455:CDS 45.0%
GCCACCAAAAGTTCAACGTT+AGG - chr7.2:70534038-70534057 None:intergenic 45.0%
GCCACTAAATCCCTTGGTTT+AGG + chr7.2:70535433-70535452 MS.gene040455:intron 45.0%
GCCTTCTCCACTAGTTATGA+TGG - chr7.2:70533982-70534001 None:intergenic 45.0%
GGAAGAGTTGGGGTAAAAAC+TGG + chr7.2:70537769-70537788 MS.gene040455:CDS 45.0%
GTCAAATCCATCTCCTGGTA+GGG - chr7.2:70536205-70536224 None:intergenic 45.0%
GTTGAACTTGGACGTAGAGA+CGG + chr7.2:70537295-70537314 MS.gene040455:CDS 45.0%
TAGTCACCACACACAAGTAG+TGG + chr7.2:70535212-70535231 MS.gene040455:intron 45.0%
TATTTGCACCCCCACATTTG+TGG + chr7.2:70536816-70536835 MS.gene040455:intron 45.0%
TCAAGGGCAAGCACAATGTT+TGG - chr7.2:70537571-70537590 None:intergenic 45.0%
TCTGCACATGAAACAACTCC+TGG - chr7.2:70536267-70536286 None:intergenic 45.0%
TGTCAAATCCATCTCCTGGT+AGG - chr7.2:70536206-70536225 None:intergenic 45.0%
! CCATCATTCAGCGTTGAACT+TGG + chr7.2:70537283-70537302 MS.gene040455:CDS 45.0%
! CCCTAACGTTGAACTTTTGG+TGG + chr7.2:70534034-70534053 MS.gene040455:CDS 45.0%
!! TTTAGGACTTTTATGGCCGG+TGG + chr7.2:70534503-70534522 MS.gene040455:intron 45.0%
!!! TTTTTGGCTTAGGCCGTGTT+TGG - chr7.2:70537401-70537420 None:intergenic 45.0%
!!! ACAATTATATATTAATATTT+TGG - chr7.2:70535403-70535422 None:intergenic 5.0%
!!! ATTAAAATGTATTTTTTTTT+AGG - chr7.2:70536672-70536691 None:intergenic 5.0%
!!! CAATTATATATTAATATTTT+GGG - chr7.2:70535402-70535421 None:intergenic 5.0%
!!! TATTTTTAAATTTTTGTTTA+AGG + chr7.2:70534424-70534443 MS.gene040455:intron 5.0%
ACCCAAGTCCACAAATGTGG+GGG - chr7.2:70536827-70536846 None:intergenic 50.0%
ACCCCCACATTTGTGGACTT+GGG + chr7.2:70536823-70536842 MS.gene040455:intron 50.0%
CACCCAAGTCCACAAATGTG+GGG - chr7.2:70536828-70536847 None:intergenic 50.0%
CCACCCAAGTCCACAAATGT+GGG - chr7.2:70536829-70536848 None:intergenic 50.0%
TGTGGGGAGTCCTAAACCAA+GGG - chr7.2:70535446-70535465 None:intergenic 50.0%
TTGCGTCCACTACTTGTGTG+TGG - chr7.2:70535221-70535240 None:intergenic 50.0%
TTGTGGGGAGTCCTAAACCA+AGG - chr7.2:70535447-70535466 None:intergenic 50.0%
! ACGAAGAGTAGCTTGTCCAG+TGG - chr7.2:70534096-70534115 None:intergenic 50.0%
! AGCATAGGTTGGGTCCAAAG+TGG - chr7.2:70537512-70537531 None:intergenic 50.0%
! CATAGGTTGGGTCCAAAGTG+GGG - chr7.2:70537510-70537529 None:intergenic 50.0%
! GCATAGGTTGGGTCCAAAGT+GGG - chr7.2:70537511-70537530 None:intergenic 50.0%
!! TGAATCGCTGGAGCATCGTA+AGG - chr7.2:70534971-70534990 None:intergenic 50.0%
ATCACGAGTGGACCCCACTT+TGG + chr7.2:70537495-70537514 MS.gene040455:CDS 55.0%
CACCCCCACATTTGTGGACT+TGG + chr7.2:70536822-70536841 MS.gene040455:intron 55.0%
CCCACATTTGTGGACTTGGG+TGG + chr7.2:70536826-70536845 MS.gene040455:intron 55.0%
GCCACCCAAGTCCACAAATG+TGG - chr7.2:70536830-70536849 None:intergenic 55.0%
! AGGACTTTTATGGCCGGTGG+AGG + chr7.2:70534506-70534525 MS.gene040455:intron 55.0%
! GTGGGGGTGCAAATAACACC+AGG - chr7.2:70536811-70536830 None:intergenic 55.0%
GCAGTGGAAGCTGTTTGCCC+AGG + chr7.2:70536246-70536265 MS.gene040455:CDS 60.0%
! CTCTCAGGAGCACACACCGT+AGG + chr7.2:70537433-70537452 MS.gene040455:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 70533933 70537834 70533933 ID=MS.gene040455
chr7.2 mRNA 70533933 70537834 70533933 ID=MS.gene040455.t1;Parent=MS.gene040455
chr7.2 exon 70533933 70534142 70533933 ID=MS.gene040455.t1.exon1;Parent=MS.gene040455.t1
chr7.2 CDS 70533933 70534142 70533933 ID=cds.MS.gene040455.t1;Parent=MS.gene040455.t1
chr7.2 exon 70536132 70536323 70536132 ID=MS.gene040455.t1.exon2;Parent=MS.gene040455.t1
chr7.2 CDS 70536132 70536323 70536132 ID=cds.MS.gene040455.t1;Parent=MS.gene040455.t1
chr7.2 exon 70537274 70537834 70537274 ID=MS.gene040455.t1.exon3;Parent=MS.gene040455.t1
chr7.2 CDS 70537274 70537834 70537274 ID=cds.MS.gene040455.t1;Parent=MS.gene040455.t1
Gene Sequence

>MS.gene040455

ATGGAGAAAATAAGAATAGTATTTATGGCTTTGGTTATGGCTTTTACCATCATAACTAGTGGAGAAGGCCAATTAGTAGAGAATTTCTACGTTTCAAGTTGCCCTAACGTTGAACTTTTGGTGGCTCAAGCAGTGACAAACAAGTTTACACAAACTATCACCACTGGACAAGCTACTCTTCGTCTATTTTTGCATGATTGCTTTGTTGAGGTATACTCACATACATACTTAATTTTCACAGTTCATATATACTCAAGTTCCTCATTTAGTATATATTTTCAAAGTTTTTTTTTTATAAAGAAAAAATTATATAAGCTTCTTCATATATATGTATGTATGGTTCAATTTCTTGATTCCTCATAGTTATTGAATTGTTTCCATCCTCGATGATCAATGATCATATAATTGAAATTAATGAACTTTTAAGTGAAAGGTGTAGAAAATCATGCAATTCTTCCTATATGTATGTGTGGTTCAATTTCTACTACGTTTATTTTTAAATTTTTGTTTAAGGTGTACGAGTAGTTTTTTGTCATAACGTCATATGTGCATTGAAACTTTTATAAGATCTTTAGGACTTTTATGGCCGGTGGAGGCTTACTCTTCTTTTTCCTAGGTCTTAATCGTAAATACGTCATCCACTAAAAATTTGCATTAACGATGTATGGAAAATTGGAATGGTATGCGTGACTTATCTTTTAGAATGTTAAAAGTTCCATATCATATAACAGATGATCTAAATAAGTGTTTATAAATAATGACATCTTATCTTACCGTTCAGTTGGAACTAACATGATTTCATAAAACTGGTTTGTGGGTGGAAATTGAAGTTATAAACACTTGAATCATCTTTTATTCAATACTCCTTACGGTCAGTATTATAAGCAAATTTCTACTTTTTAGATTCATTCAATAAATGATGTATGTGGCCTACAATATAGACCACATACATCATTTATTGAATGAACCTAAAAAGTCAAAATTTACTTATAATAGTGACCGGTGGGAGTATGAAACTCTTTAACATAGAATAAACCTTACGATGCTCCAGCGATTCAATTTAGTTTCAAACTGAAAATAATACTCCAATTCATCTTTAACTTGTTAAGATAATGGACAAATTAACCACTACTAATTTTTTTATAGTTGTACAAAAGAGATTAGTTTGTCTTCATATTATTTTTAGTCAAAGATTGAATTAGAGCTGCTAGGAAATTGTGAGAGATTGAATCTTTTGATTTTTAGAAGCTGAAAATGATAGAAATATGCTAGTATGAAATAGTCACCACACACAAGTAGTGGACGCAATAAACAATAATATCCCACGTCATAAGAATTTGCTTGCTAGCTAGAACTAGAAGACATTGACTAAGAACACAAAATTAATACAACTTGGATTTGATTTTTCATTTCAATAAAACTCAATTGCTGCCAAAATTGATTTGGTTTTGTTTGTTTGTTTTTATCCCAAAATATTAATATATAATTGTGATTCTCTTAGCCACTAAATCCCTTGGTTTAGGACTCCCCACAAATTACTTGGCTACAGTATTGATAGACCTGATTTTGTGCAAAAAAATATTTAATTTTCAATGCTGGAGCTATACTACAAGAATAACTCTATTTCACTCAACTGTTGGTATACTGCACTCCTGTGAACTAATAATTGGATAATTATTGTAAAAAACACAAATAAGCCAAAAGGGAAATTTATACACTATGTTTACATTTAACTTGTCCATTATTTATTTATTTATTTATTTATTTATTTAATTACACTGTTTATTTTTTGAAAAAAAATGTATTTTGAATTTGGAATATAGTTTTTATTTATTTATAACCTTAAGAAAAATTAGGCCTCGAGTATTGGCTTTCTTAGAAATTGTGATTGACCTTAACACAACCCCATAAAATTGACTTGTGAGGTGATGATTGTCCTGAATAATAAACACGTCTAGATTATCTTTTGTCCAATGTGAGACTCTTTAATAGATTTTTTCCCACGTTCGGATGAGTAAATCAGAACAAAACGGTGTTTTTTTATGTATAGTTGAAATCTGAATGGGAATGGATTTCAAGAATTATGGGAGGTGGGAAAAGAAATTCCCTTAATTCATTAAACTCTTTATTTCAAATTGGTTTAATCCAATTAATTTAAAAATGATTTGGTTTGTATTAAAGAACAATTTTGATGTGTAGGGATGTGATGCTTCAGTTATGATTGCTTCACCAAATGGAGATGCAGAAAAAGATGCAAAGGAAAATCTTTCCCTACCAGGAGATGGATTTGACACTGTGATTAAAGCAAAGCAAGCAGTGGAAGCTGTTTGCCCAGGAGTTGTTTCATGTGCAGACATTTTGGCAATTGCCACTAGAGACGTTATAGGCTTGGTAAGCATTATTATTTTAGTGCCTCAGAGACACGAGATAACATTACCCTTATTTTATAACAAAATTACAAACCCTAAAATTAAGTAAAAATCAATGCATTTCATTAACCCACAAGAGTTTATTTTTTATTTTTTTTTAAGAAGCCCACAAGAGTTTATTTTGATAAAGTATATCCAAATATGTCACATTTTAATAAGATTTAGAAACTTATAGTGACATCATGACTTGTATAAAAAAAAAAGGTTGTTTCAATAAAGAAAACTCGGTGACTAATTACATTGTCAAACTCATTTTTTTAGGTTAAATTGTCAAACTCATCAAAAGAAATAATACATTAAATTGATTCCTAAAAAAAAATACATTTTAATTGTTTGCGTGTATTTATAAATATCATACTACCAATTTTTTTAATTCTGAGAAAGTTAGATGCATCTTTGTAAATTTCTTGTTGTTATTTTCAAACTATGTTTGGTTTGTTAATTTTCCTGGTGTTATTTGCACCCCCACATTTGTGGACTTGGGTGGCTTTTAATACATAGTCTTTCATTAAAAAAAAAAAACAATTTCCTTTCTTGTTCATCTAAGATTATACCTTCAATTATTCTTGAATACCAAAAAAAAGGAAAATACTATAAAATTTAATTCATAAGAATAACATAATTATTACAAAATAAAATCCAAACTAATTAAAGAGTATTTTTTAATCATATCATTAATAGAAGATGTAAGTAGTAAAATTGACTTTTTTTTATGGGTGTTGGCTTGAAACCTTGAAGTATGATCCTTCTCAAAGTTTCAAATTTGATTATGTTCGATGTCAATTTGAAGGGCTAGTTTTGCTTCTTATTTTTTTTTTTTGGACTATTTTAAACCATTTCTGTTTAAATTTTGTTCTTCTTATAATCAACATCAAATTGATGTATATTATTATGTTCAACTATGTATCACAGCTTGGAGGTCCATCATTCAGCGTTGAACTTGGACGTAGAGACGGACTCAATTCCAAAGCATCAAATGTAGAAGCAAACCTTCCAAAACCAACTTTCAATCTGAATCAACTAAACACTATTTTCTCCAAACACGGCCTAAGCCAAAAAGACATGATTGCACTCTCAGGAGCACACACCGTAGGATTCTCACATTGTGACCAATTCACAAACCGTTTATACTCATCACGAGTGGACCCCACTTTGGACCCAACCTATGCTCAACAATTAATGTCAGGGTGCCCTAGAAATGTTGACCCAAACATTGTGCTTGCCCTTGATACTCAAACTGAACATACTTTTGATAATTTGTATTACAAAAATTTGGTTAATGGAAAAGGGTTGTTAAGTTCAGATCAAGTTTTATTCACTGATGGTGCTTCAAGATCTACGGTTGTTGAATTTGCTAATGATGGTAGTAAATTCTTTGATGCATTTGTTGTGGCTATTAAGAAGCTTGGAAGAGTTGGGGTAAAAACTGGTAAAGAGGGAGAGATTAGGAGAGATTGTAGTAAATTTAATTAG
Protein sequence

>MS.gene040455.t1

MEKIRIVFMALVMAFTIITSGEGQLVENFYVSSCPNVELLVAQAVTNKFTQTITTGQATLRLFLHDCFVEGCDASVMIASPNGDAEKDAKENLSLPGDGFDTVIKAKQAVEAVCPGVVSCADILAIATRDVIGLLGGPSFSVELGRRDGLNSKASNVEANLPKPTFNLNQLNTIFSKHGLSQKDMIALSGAHTVGFSHCDQFTNRLYSSRVDPTLDPTYAQQLMSGCPRNVDPNIVLALDTQTEHTFDNLYYKNLVNGKGLLSSDQVLFTDGASRSTVVEFANDGSKFFDAFVVAIKKLGRVGVKTGKEGEIRRDCSKFN