Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042864.t1 | XP_003619849.1 | 97.6 | 333 | 8 | 0 | 1 | 333 | 1 | 333 | 6.50E-186 | 659.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042864.t1 | Q9SE51 | 63.0 | 284 | 101 | 2 | 54 | 333 | 71 | 354 | 2.8e-105 | 383.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042864.t1 | G7KQ87 | 97.6 | 333 | 8 | 0 | 1 | 333 | 1 | 333 | 4.7e-186 | 659.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042864 | MS.gene65650 | PPI |
| MS.gene042864 | MS.gene058245 | PPI |
| MS.gene042864 | MS.gene67725 | PPI |
| MS.gene042864 | MS.gene55980 | PPI |
| MS.gene042864 | MS.gene00146 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042864.t1 | MTR_6g069850 | 97.598 | 333 | 8 | 0 | 1 | 333 | 1 | 333 | 0.0 | 662 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042864.t1 | AT3G17910 | 62.500 | 288 | 104 | 2 | 50 | 333 | 67 | 354 | 6.47e-134 | 385 |
| MS.gene042864.t1 | AT1G48510 | 38.344 | 326 | 174 | 8 | 24 | 330 | 21 | 338 | 6.05e-65 | 210 |
| MS.gene042864.t1 | AT1G48510 | 37.730 | 326 | 177 | 8 | 24 | 330 | 21 | 339 | 9.14e-65 | 209 |
| MS.gene042864.t1 | AT1G48510 | 38.344 | 326 | 172 | 9 | 24 | 330 | 21 | 336 | 1.05e-64 | 209 |
| MS.gene042864.t1 | AT1G48510 | 41.270 | 252 | 130 | 5 | 92 | 330 | 1 | 247 | 4.16e-59 | 192 |
Find 106 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAATCGTGGTGGAGATTT+TGG | 0.125508 | 6.3:+66669232 | MS.gene042864:CDS |
| TTCTGCAGCAGTTACATTTA+TGG | 0.156595 | 6.3:+66670344 | MS.gene042864:CDS |
| ATTTCAGGAGTTACTGAAAA+TGG | 0.240801 | 6.3:+66668389 | MS.gene042864:CDS |
| AAGTGAGGAGTTAGATTCTT+TGG | 0.275735 | 6.3:+66668292 | MS.gene042864:CDS |
| CCACGTTCAAGAAGCATTTC+AGG | 0.288011 | 6.3:+66668374 | MS.gene042864:CDS |
| TGAAAGGAAAAGCTTCTAAA+TGG | 0.296461 | 6.3:+66666194 | MS.gene042864:intron |
| GCGGAGCTCCGCAAGGATTC+TGG | 0.303888 | 6.3:-66665935 | None:intergenic |
| CATCCTCTGTTAACTAGAAT+TGG | 0.310516 | 6.3:-66669117 | None:intergenic |
| GAGCAATTGCATTTGGTCTT+GGG | 0.332922 | 6.3:+66666233 | MS.gene042864:CDS |
| GAATCTAACTCCTCACTTGA+TGG | 0.350213 | 6.3:-66668287 | None:intergenic |
| GGAGCAATTGCATTTGGTCT+TGG | 0.353787 | 6.3:+66666232 | MS.gene042864:CDS |
| CCAAAATCTCCACCACGATT+TGG | 0.379618 | 6.3:-66669232 | None:intergenic |
| CTACCTGGAGCAATTGCATT+TGG | 0.396302 | 6.3:+66666226 | MS.gene042864:CDS |
| TTCTGGAAGGCCGCAAGATC+GGG | 0.402652 | 6.3:-66669698 | None:intergenic |
| GGAAGAGGGTAAGGATTACT+TGG | 0.403772 | 6.3:-66669760 | None:intergenic |
| AAGGATTCTGGCGGCGGAGG+TGG | 0.413809 | 6.3:-66665923 | None:intergenic |
| CGCAAGGATTCTGGCGGCGG+AGG | 0.414311 | 6.3:-66665926 | None:intergenic |
| ACCATGTTAATATGTAGTTT+AGG | 0.414596 | 6.3:-66669831 | None:intergenic |
| GAAGACCCGGGATCATTTGC+AGG | 0.418767 | 6.3:-66669643 | None:intergenic |
| TTGCATTTGGTCTTGGGAGT+TGG | 0.438591 | 6.3:+66666239 | MS.gene042864:CDS |
| CGGTTCATGATCATCCTGAT+AGG | 0.440293 | 6.3:+66668438 | MS.gene042864:CDS |
| AATGTTACAGATTAAAATGT+TGG | 0.450134 | 6.3:+66668211 | MS.gene042864:intron |
| CAATTCTAGTTAACAGAGGA+TGG | 0.450262 | 6.3:+66669118 | MS.gene042864:CDS |
| TTGCAGGAACAAATATGCTT+GGG | 0.457855 | 6.3:-66669627 | None:intergenic |
| TTTGCAGGAACAAATATGCT+TGG | 0.461261 | 6.3:-66669628 | None:intergenic |
| TAACACCTAACGAAGTGGTC+GGG | 0.463253 | 6.3:+66669584 | MS.gene042864:CDS |
| TGATCATGAACCGGCATAAG+AGG | 0.466161 | 6.3:-66668428 | None:intergenic |
| ATTCTGGCGGCGGAGGTGGA+TGG | 0.467723 | 6.3:-66665919 | None:intergenic |
| CTCCGCAAGGATTCTGGCGG+CGG | 0.468159 | 6.3:-66665929 | None:intergenic |
| TATGCACCACTGAATTTCAA+TGG | 0.468291 | 6.3:-66668263 | None:intergenic |
| TTTCTGGAAGGCCGCAAGAT+CGG | 0.468311 | 6.3:-66669699 | None:intergenic |
| AGATTCTTTGGAATTTAGAA+AGG | 0.468912 | 6.3:+66668304 | MS.gene042864:CDS |
| TTTGTTCCTGCAAATGATCC+CGG | 0.482771 | 6.3:+66669637 | MS.gene042864:CDS |
| TCTTCTTCCTCCGATTCAAA+TGG | 0.486388 | 6.3:+66666042 | MS.gene042864:CDS |
| TGCCGGTGCGGGTGGAGATA+CGG | 0.487530 | 6.3:-66665957 | None:intergenic |
| CGCCGTATCTCCACCCGCAC+CGG | 0.488507 | 6.3:+66665955 | MS.gene042864:CDS |
| GATTGTTAGAAGAGAAGATA+AGG | 0.489684 | 6.3:+66666264 | MS.gene042864:CDS |
| GAGGATGGGTTCCCCGCAGT+TGG | 0.495591 | 6.3:+66669133 | MS.gene042864:CDS |
| CCGCAAGATCGGGCAATGCT+AGG | 0.495974 | 6.3:-66669688 | None:intergenic |
| AGCGGAGCTTATGCCGGTGC+GGG | 0.497617 | 6.3:-66665968 | None:intergenic |
| GAATGCCTTGATTCGAAGTT+CGG | 0.498349 | 6.3:+66669792 | MS.gene042864:CDS |
| TGAGTGCTTACCATTTGAAT+CGG | 0.500805 | 6.3:-66666052 | None:intergenic |
| TCGAAGTTCGGTGATGCCTC+AGG | 0.503538 | 6.3:+66669804 | MS.gene042864:CDS |
| ACTACCCCGACCACTTCGTT+AGG | 0.507230 | 6.3:-66669589 | None:intergenic |
| CTATCAGGATGATCATGAAC+CGG | 0.510232 | 6.3:-66668437 | None:intergenic |
| CCTTCACCTTCACAAGCTGA+TGG | 0.512078 | 6.3:+66669207 | MS.gene042864:CDS |
| ACGGCAGCAGCAGAGCTGAA+TGG | 0.518313 | 6.3:-66665997 | None:intergenic |
| TCGAGGGAAGAGGTTGCAAA+TGG | 0.520408 | 6.3:+66668238 | MS.gene042864:CDS |
| CGGAGGAAGAAGAAAGTGTT+GGG | 0.522263 | 6.3:-66666032 | None:intergenic |
| GCTTGTGAAGGTGAAGGAAG+TGG | 0.523253 | 6.3:-66669201 | None:intergenic |
| ATCAAGGCATTCACATCCTT+AGG | 0.528787 | 6.3:-66669781 | None:intergenic |
| CTGGCGGCGGAGGTGGATGG+TGG | 0.531711 | 6.3:-66665916 | None:intergenic |
| TGTTATAACACCTCTTATGC+CGG | 0.533498 | 6.3:+66668418 | MS.gene042864:CDS |
| CATCACCGAACTTCGAATCA+AGG | 0.533561 | 6.3:-66669797 | None:intergenic |
| AGACCAAATGCAATTGCTCC+AGG | 0.535961 | 6.3:-66666229 | None:intergenic |
| ACATCCTTAGGAAGAGGGTA+AGG | 0.539456 | 6.3:-66669769 | None:intergenic |
| ATTAAAATGTTGGAGTATCG+AGG | 0.541307 | 6.3:+66668221 | MS.gene042864:CDS |
| GCATTCACATCCTTAGGAAG+AGG | 0.545860 | 6.3:-66669775 | None:intergenic |
| ATTTAGAAAGGTTGTCTGCA+AGG | 0.547498 | 6.3:+66668316 | MS.gene042864:CDS |
| AAATGGTGGTTGTATCTACC+TGG | 0.550366 | 6.3:+66666211 | MS.gene042864:CDS |
| TTGTTCCTGCAAATGATCCC+GGG | 0.561035 | 6.3:+66669638 | MS.gene042864:CDS |
| TAATCCTTACCCTCTTCCTA+AGG | 0.561040 | 6.3:+66669765 | MS.gene042864:CDS |
| TTTAGAAAGGTTGTCTGCAA+GGG | 0.561782 | 6.3:+66668317 | MS.gene042864:CDS |
| TGTTGGAGTATCGAGGGAAG+AGG | 0.567895 | 6.3:+66668228 | MS.gene042864:CDS |
| CTTCGTTAGGTGTTACAGAC+GGG | 0.568536 | 6.3:-66669576 | None:intergenic |
| CCTAGCATTGCCCGATCTTG+CGG | 0.570187 | 6.3:+66669688 | MS.gene042864:CDS |
| CAGCAGCAGAGCTGAATGGA+CGG | 0.575758 | 6.3:-66665993 | None:intergenic |
| TCGGAGGAAGAAGAAAGTGT+TGG | 0.577887 | 6.3:-66666033 | None:intergenic |
| GAAGTGGTCGGGGTAGTTCG+CGG | 0.578152 | 6.3:+66669595 | MS.gene042864:CDS |
| TTGGTTCCATCAGCTTGTGA+AGG | 0.581386 | 6.3:-66669213 | None:intergenic |
| AATTCTAGTTAACAGAGGAT+GGG | 0.581794 | 6.3:+66669119 | MS.gene042864:CDS |
| TTACATTTATGGCTTTCAAG+AGG | 0.585665 | 6.3:+66670355 | MS.gene042864:CDS |
| GGAGCTTATGCCGGTGCGGG+TGG | 0.589785 | 6.3:-66665965 | None:intergenic |
| CCATCAGCTTGTGAAGGTGA+AGG | 0.600241 | 6.3:-66669207 | None:intergenic |
| ACGGACAGCGGAGCTTATGC+CGG | 0.600337 | 6.3:-66665974 | None:intergenic |
| GGCTAAGACAGAGTAACAAG+AGG | 0.601471 | 6.3:+66670376 | MS.gene042864:CDS |
| CATTCACATCCTTAGGAAGA+GGG | 0.601594 | 6.3:-66669774 | None:intergenic |
| GGAAGAAGAAAGTGTTGGGT+CGG | 0.602196 | 6.3:-66666028 | None:intergenic |
| GTCTGTAACACCTAACGAAG+TGG | 0.603834 | 6.3:+66669579 | MS.gene042864:CDS |
| TTAAAATGTTGGAGTATCGA+GGG | 0.604898 | 6.3:+66668222 | MS.gene042864:CDS |
| ATGTTAATATGTAGTTTAGG+TGG | 0.606805 | 6.3:-66669828 | None:intergenic |
| AACACCTAACGAAGTGGTCG+GGG | 0.607807 | 6.3:+66669585 | MS.gene042864:CDS |
| GTAACACCTAACGAAGTGGT+CGG | 0.608874 | 6.3:+66669583 | MS.gene042864:CDS |
| TAGGTGTTACAGACGGGACC+TGG | 0.609434 | 6.3:-66669570 | None:intergenic |
| CCTGAAATGCTTCTTGAACG+TGG | 0.609460 | 6.3:-66668374 | None:intergenic |
| CAGCGGAGCTTATGCCGGTG+CGG | 0.613402 | 6.3:-66665969 | None:intergenic |
| ATAGAACCACTGAGAAGACC+CGG | 0.614508 | 6.3:-66669656 | None:intergenic |
| ACTTCGTTAGGTGTTACAGA+CGG | 0.614691 | 6.3:-66669577 | None:intergenic |
| GTGCTTACCATTTGAATCGG+AGG | 0.618003 | 6.3:-66666049 | None:intergenic |
| ATGGAACCATTGAAATTCAG+TGG | 0.619217 | 6.3:+66668257 | MS.gene042864:CDS |
| CTCCGCCGCCAGAATCCTTG+CGG | 0.625176 | 6.3:+66665927 | MS.gene042864:CDS |
| ACCTAAACTACATATTAACA+TGG | 0.626458 | 6.3:+66669830 | MS.gene042864:CDS |
| AGAGCTGAATGGACGGACAG+CGG | 0.628766 | 6.3:-66665986 | None:intergenic |
| TGTTGGGTCGGAATCAGAGA+CGG | 0.630196 | 6.3:-66666016 | None:intergenic |
| GAGCTCCGCAAGGATTCTGG+CGG | 0.633346 | 6.3:-66665932 | None:intergenic |
| AAGGAAAAGCTTCTAAATGG+TGG | 0.634466 | 6.3:+66666197 | MS.gene042864:intron |
| ATGTAGTTTAGGTGGTCCTG+AGG | 0.656016 | 6.3:-66669820 | None:intergenic |
| ATGATCCCGGGTCTTCTCAG+TGG | 0.657512 | 6.3:+66669650 | MS.gene042864:CDS |
| AGATACGGCGGAGCTCCGCA+AGG | 0.664150 | 6.3:-66665942 | None:intergenic |
| AAGCTGATGGAACCAAATCG+TGG | 0.670751 | 6.3:+66669220 | MS.gene042864:CDS |
| TCTCCAATTCTAGTTAACAG+AGG | 0.674448 | 6.3:+66669114 | MS.gene042864:CDS |
| TGGTGCATATCCATCAAGTG+AGG | 0.687984 | 6.3:+66668277 | MS.gene042864:CDS |
| CTGATGGAACCAAATCGTGG+TGG | 0.697330 | 6.3:+66669223 | MS.gene042864:CDS |
| TAGAACCACTGAGAAGACCC+GGG | 0.697971 | 6.3:-66669655 | None:intergenic |
| TAAAGAGTCTGTTATCAGTG+AGG | 0.699472 | 6.3:+66669257 | MS.gene042864:CDS |
| CGGTGCGGGTGGAGATACGG+CGG | 0.717755 | 6.3:-66665954 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATCTCTATAATTATATT+AGG | + | chr6.3:66666517-66666536 | MS.gene042864:intron | 10.0% |
| !!! | AATATTACATCTTTTATTTT+AGG | - | chr6.3:66670174-66670193 | None:intergenic | 10.0% |
| !!! | CATTTTTTTTTTTTTAAACA+AGG | - | chr6.3:66669320-66669339 | None:intergenic | 10.0% |
| !!! | TAATTTTCTTAAATAATTAC+CGG | - | chr6.3:66666618-66666637 | None:intergenic | 10.0% |
| !!! | TATGTTAATTGATTTTTTTT+TGG | + | chr6.3:66666163-66666182 | MS.gene042864:intron | 10.0% |
| !! | AAAATGAATTGTTTGTATTT+GGG | + | chr6.3:66670308-66670327 | MS.gene042864:intron | 15.0% |
| !! | AACCTTAACATTAATAAAAA+TGG | + | chr6.3:66670268-66670287 | MS.gene042864:intron | 15.0% |
| !! | ATAGTAGTAAATTTAAAAGA+TGG | - | chr6.3:66667794-66667813 | None:intergenic | 15.0% |
| !! | ATTCAATTCATTATAACTAT+CGG | + | chr6.3:66666326-66666345 | MS.gene042864:intron | 15.0% |
| !! | GAATAAAAAAAATTAGTGAA+AGG | + | chr6.3:66670113-66670132 | MS.gene042864:intron | 15.0% |
| !! | TTAACATTAATAAAAATGGT+TGG | + | chr6.3:66670272-66670291 | MS.gene042864:intron | 15.0% |
| !!! | AAAAAATGAACGTTTTTTTA+AGG | - | chr6.3:66666139-66666158 | None:intergenic | 15.0% |
| !!! | AAAAATGAACGTTTTTTTAA+GGG | - | chr6.3:66666138-66666157 | None:intergenic | 15.0% |
| !!! | AACCATTTTTATTAATGTTA+AGG | - | chr6.3:66670273-66670292 | None:intergenic | 15.0% |
| !!! | AACTATGTTTATATTGTTTT+TGG | + | chr6.3:66667444-66667463 | MS.gene042864:intron | 15.0% |
| !!! | AACTTTTAAGTTTTTCATTT+TGG | + | chr6.3:66668808-66668827 | MS.gene042864:intron | 15.0% |
| !!! | ATTGATTTTGATTATAAGAA+AGG | + | chr6.3:66666967-66666986 | MS.gene042864:intron | 15.0% |
| !!! | TAGTTTTTTTTTTTTTTTGG+TGG | + | chr6.3:66666636-66666655 | MS.gene042864:intron | 15.0% |
| !!! | TTAATTGATTTTTTTTTGGT+TGG | + | chr6.3:66666167-66666186 | MS.gene042864:intron | 15.0% |
| !!! | TTGATTTTGATTATAAGAAA+GGG | + | chr6.3:66666968-66666987 | MS.gene042864:intron | 15.0% |
| !! | AATCAAATAATGAAGATTGA+CGG | - | chr6.3:66667327-66667346 | None:intergenic | 20.0% |
| !! | AATGTTACAGATTAAAATGT+TGG | + | chr6.3:66668211-66668230 | MS.gene042864:intron | 20.0% |
| !! | ATATGAAAATTGAAGAAACT+CGG | - | chr6.3:66669068-66669087 | None:intergenic | 20.0% |
| !! | ATATGTAAACAAACAACTTA+TGG | + | chr6.3:66668096-66668115 | MS.gene042864:intron | 20.0% |
| !! | CAAAATGAATTGTTTGTATT+TGG | + | chr6.3:66670307-66670326 | MS.gene042864:intron | 20.0% |
| !! | GATAGTTATAATGAATTGAA+TGG | - | chr6.3:66666327-66666346 | None:intergenic | 20.0% |
| !!! | TAAGTTTTTCATTTTGGTTA+AGG | + | chr6.3:66668814-66668833 | MS.gene042864:intron | 20.0% |
| !!! | TGATTTTGATTATAAGAAAG+GGG | + | chr6.3:66666969-66666988 | MS.gene042864:intron | 20.0% |
| ! | AACACTTAAACTAAGACATT+TGG | + | chr6.3:66668555-66668574 | MS.gene042864:intron | 25.0% |
| ! | AATGAATTGAATGGCAAAAA+TGG | - | chr6.3:66666318-66666337 | None:intergenic | 25.0% |
| ! | ACATGATTTATTGCAAATTG+CGG | + | chr6.3:66667121-66667140 | MS.gene042864:intron | 25.0% |
| ! | ACCATGTTAATATGTAGTTT+AGG | - | chr6.3:66669834-66669853 | None:intergenic | 25.0% |
| ! | ACCTAAACTACATATTAACA+TGG | + | chr6.3:66669830-66669849 | MS.gene042864:CDS | 25.0% |
| ! | AGAATTATGTCAGTGAAAAT+TGG | + | chr6.3:66667018-66667037 | MS.gene042864:intron | 25.0% |
| ! | ATCAAATAATGAAGATTGAC+GGG | - | chr6.3:66667326-66667345 | None:intergenic | 25.0% |
| ! | ATGTTAATATGTAGTTTAGG+TGG | - | chr6.3:66669831-66669850 | None:intergenic | 25.0% |
| ! | CAGAGTTCAAATATATTAAG+TGG | - | chr6.3:66667228-66667247 | None:intergenic | 25.0% |
| ! | CTTAATGCATCAAAAACTTA+TGG | - | chr6.3:66667743-66667762 | None:intergenic | 25.0% |
| ! | GATAAAAAATCAATCTACGT+GGG | + | chr6.3:66668350-66668369 | MS.gene042864:CDS | 25.0% |
| ! | GTGAAAATTGGATACAAATT+TGG | + | chr6.3:66667030-66667049 | MS.gene042864:intron | 25.0% |
| ! | TAATCTGTAACATTGTAAGA+TGG | - | chr6.3:66668205-66668224 | None:intergenic | 25.0% |
| ! | TATCTAGATCACTAACATAA+CGG | - | chr6.3:66667716-66667735 | None:intergenic | 25.0% |
| ! | TGATAAAAAATCAATCTACG+TGG | + | chr6.3:66668349-66668368 | MS.gene042864:CDS | 25.0% |
| ! | TTAAACAAGGAATGATATGA+TGG | - | chr6.3:66669307-66669326 | None:intergenic | 25.0% |
| !! | CATAAGTTTTTGATGCATTA+AGG | + | chr6.3:66667741-66667760 | MS.gene042864:intron | 25.0% |
| !!! | AAATTTTGATTCTGAGAAAG+GGG | + | chr6.3:66666721-66666740 | MS.gene042864:intron | 25.0% |
| !!! | AATTTTTTGTTCTGTGTTTG+TGG | + | chr6.3:66667497-66667516 | MS.gene042864:intron | 25.0% |
| !!! | AGATTCTTTGGAATTTAGAA+AGG | + | chr6.3:66668304-66668323 | MS.gene042864:CDS | 25.0% |
| !!! | ATGATTTTGATTTACCTATC+AGG | - | chr6.3:66668455-66668474 | None:intergenic | 25.0% |
| !!! | ATTTTGATTATAAGAAAGGG+GGG | + | chr6.3:66666971-66666990 | MS.gene042864:intron | 25.0% |
| !!! | GAAATTTTGATTCTGAGAAA+GGG | + | chr6.3:66666720-66666739 | MS.gene042864:intron | 25.0% |
| !!! | GATTTTGATTATAAGAAAGG+GGG | + | chr6.3:66666970-66666989 | MS.gene042864:intron | 25.0% |
| !!! | TGAAATTTTGATTCTGAGAA+AGG | + | chr6.3:66666719-66666738 | MS.gene042864:intron | 25.0% |
| !!! | TTGGAAAGAAAAGTTTTTAG+AGG | + | chr6.3:66669152-66669171 | MS.gene042864:CDS | 25.0% |
| !!! | TTTTTTGGTTGGTTTATGAA+AGG | + | chr6.3:66666178-66666197 | MS.gene042864:intron | 25.0% |
| AAATTCTCAGTCATAAGTAG+TGG | - | chr6.3:66670235-66670254 | None:intergenic | 30.0% | |
| AAATTGAGCTCTTTACCAAA+AGG | - | chr6.3:66667970-66667989 | None:intergenic | 30.0% | |
| AACAATCAACATCAGAAAGT+TGG | - | chr6.3:66668750-66668769 | None:intergenic | 30.0% | |
| AACACCTATGATCGAAAATT+TGG | + | chr6.3:66666900-66666919 | MS.gene042864:intron | 30.0% | |
| AATGACTTAGTCTACAAACT+TGG | + | chr6.3:66667533-66667552 | MS.gene042864:intron | 30.0% | |
| AATTTGATGAATTCCTCATG+CGG | + | chr6.3:66666083-66666102 | MS.gene042864:intron | 30.0% | |
| AGATTAATTCTATGCATCGA+CGG | - | chr6.3:66666504-66666523 | None:intergenic | 30.0% | |
| AGTTTCTCACTTCATCAATA+TGG | - | chr6.3:66667293-66667312 | None:intergenic | 30.0% | |
| ATACAACCAACTCAAAAACA+TGG | - | chr6.3:66669037-66669056 | None:intergenic | 30.0% | |
| ATTCATGATATCTCCGTAAA+TGG | - | chr6.3:66668682-66668701 | None:intergenic | 30.0% | |
| ATTGTGTTTGCATACTATGA+TGG | + | chr6.3:66668633-66668652 | MS.gene042864:intron | 30.0% | |
| ATTTCAGGAGTTACTGAAAA+TGG | + | chr6.3:66668389-66668408 | MS.gene042864:CDS | 30.0% | |
| CAGAAATATTGTCGTTACTA+AGG | - | chr6.3:66667370-66667389 | None:intergenic | 30.0% | |
| CTATAAGTATAAGCATGTGT+CGG | - | chr6.3:66670024-66670043 | None:intergenic | 30.0% | |
| GAAAATTGGTTGACATTTGT+CGG | + | chr6.3:66666668-66666687 | MS.gene042864:intron | 30.0% | |
| GATATTTGTGGAGCTAATTT+AGG | + | chr6.3:66666417-66666436 | MS.gene042864:intron | 30.0% | |
| GATTGTTAGAAGAGAAGATA+AGG | + | chr6.3:66666264-66666283 | MS.gene042864:CDS | 30.0% | |
| GCAATGTTTCAAAATCAAAC+CGG | - | chr6.3:66669521-66669540 | None:intergenic | 30.0% | |
| GGTGGTGAATTTAAGAAAAT+TGG | + | chr6.3:66666654-66666673 | MS.gene042864:intron | 30.0% | |
| TACAGATCCTTATTCTTTCT+TGG | + | chr6.3:66669925-66669944 | MS.gene042864:intron | 30.0% | |
| TAGTGGAAAATATGTGAATG+CGG | + | chr6.3:66667409-66667428 | MS.gene042864:intron | 30.0% | |
| TCATTAGCCAAGAAAGAATA+AGG | - | chr6.3:66669935-66669954 | None:intergenic | 30.0% | |
| TCATTGTATTGTTCTGTTTC+TGG | + | chr6.3:66670193-66670212 | MS.gene042864:intron | 30.0% | |
| TCTTAAGTCTTAACCAATCA+AGG | + | chr6.3:66667842-66667861 | MS.gene042864:intron | 30.0% | |
| TGAAAGGAAAAGCTTCTAAA+TGG | + | chr6.3:66666194-66666213 | MS.gene042864:intron | 30.0% | |
| TGTTTACATATTATTCTGCC+AGG | - | chr6.3:66668087-66668106 | None:intergenic | 30.0% | |
| TTACATTTATGGCTTTCAAG+AGG | + | chr6.3:66670355-66670374 | MS.gene042864:CDS | 30.0% | |
| TTCTCGAATTTAAAAGGCTT+TGG | + | chr6.3:66668884-66668903 | MS.gene042864:intron | 30.0% | |
| TTTAAGCCATCTACATATCA+AGG | - | chr6.3:66667917-66667936 | None:intergenic | 30.0% | |
| ! | AAAACTTTTCTTTCCAACTG+CGG | - | chr6.3:66669149-66669168 | None:intergenic | 30.0% |
| ! | AATTCTAGTTAACAGAGGAT+GGG | + | chr6.3:66669119-66669138 | MS.gene042864:CDS | 30.0% |
| ! | ATTTTCCACTAGATCTGAAT+TGG | - | chr6.3:66667400-66667419 | None:intergenic | 30.0% |
| ! | GATGTTTTCATAATCTATCC+TGG | + | chr6.3:66668066-66668085 | MS.gene042864:intron | 30.0% |
| ! | TATGATGGAAAAATGACTAG+AGG | - | chr6.3:66669292-66669311 | None:intergenic | 30.0% |
| ! | TCAACATAGACAGTATTTTC+TGG | - | chr6.3:66669718-66669737 | None:intergenic | 30.0% |
| ! | TGGATTCTCTTAAAAGTACA+AGG | - | chr6.3:66668730-66668749 | None:intergenic | 30.0% |
| !! | ATTAAAATGTTGGAGTATCG+AGG | + | chr6.3:66668221-66668240 | MS.gene042864:CDS | 30.0% |
| !! | CCTAGTTTTTGTAAAAGATG+GGG | + | chr6.3:66670081-66670100 | MS.gene042864:intron | 30.0% |
| !! | GCCTAGTTTTTGTAAAAGAT+GGG | + | chr6.3:66670080-66670099 | MS.gene042864:intron | 30.0% |
| !! | TAAGTAGACCATTTTAGAGA+AGG | - | chr6.3:66668598-66668617 | None:intergenic | 30.0% |
| !! | TCGAAAATTTGGTGCTATTT+AGG | + | chr6.3:66666911-66666930 | MS.gene042864:intron | 30.0% |
| !! | TTAAAATGTTGGAGTATCGA+GGG | + | chr6.3:66668222-66668241 | MS.gene042864:CDS | 30.0% |
| !!! | AATTTTGATTCTGAGAAAGG+GGG | + | chr6.3:66666722-66666741 | MS.gene042864:intron | 30.0% |
| !!! | AGAATTTTTTGTGTGCCTTT+TGG | + | chr6.3:66667952-66667971 | MS.gene042864:intron | 30.0% |
| AAGGAAAAGCTTCTAAATGG+TGG | + | chr6.3:66666197-66666216 | MS.gene042864:intron | 35.0% | |
| AAGTGAGGAGTTAGATTCTT+TGG | + | chr6.3:66668292-66668311 | MS.gene042864:CDS | 35.0% | |
| ATGGAACCATTGAAATTCAG+TGG | + | chr6.3:66668257-66668276 | MS.gene042864:CDS | 35.0% | |
| ATTTAGAAAGGTTGTCTGCA+AGG | + | chr6.3:66668316-66668335 | MS.gene042864:CDS | 35.0% | |
| ATTTGATGAATTCCTCATGC+GGG | + | chr6.3:66666084-66666103 | MS.gene042864:intron | 35.0% | |
| CATCCTCTGTTAACTAGAAT+TGG | - | chr6.3:66669120-66669139 | None:intergenic | 35.0% | |
| CCATCTACATATCAAGGAAA+CGG | - | chr6.3:66667911-66667930 | None:intergenic | 35.0% | |
| CGACATAGCATAGTGTAATT+TGG | + | chr6.3:66667075-66667094 | MS.gene042864:intron | 35.0% | |
| CGCAACATAAACTCCATTTA+CGG | + | chr6.3:66668666-66668685 | MS.gene042864:intron | 35.0% | |
| GCTGGATTCTCGAATTTAAA+AGG | + | chr6.3:66668878-66668897 | MS.gene042864:intron | 35.0% | |
| TAAAGAGTCTGTTATCAGTG+AGG | + | chr6.3:66669257-66669276 | MS.gene042864:CDS | 35.0% | |
| TAAGGATTATTCCCTTCTTG+CGG | + | chr6.3:66668832-66668851 | MS.gene042864:intron | 35.0% | |
| TATCCACTTAAATCATGCTG+AGG | + | chr6.3:66666392-66666411 | MS.gene042864:intron | 35.0% | |
| TATCTATGTTTCAGTTTCGC+TGG | + | chr6.3:66668860-66668879 | MS.gene042864:intron | 35.0% | |
| TATGCACCACTGAATTTCAA+TGG | - | chr6.3:66668266-66668285 | None:intergenic | 35.0% | |
| TCAAAACATTGCTCGTTTAC+AGG | + | chr6.3:66669546-66669565 | MS.gene042864:intron | 35.0% | |
| TGACTAGAAATCTCCTTGAT+TGG | - | chr6.3:66667858-66667877 | None:intergenic | 35.0% | |
| TGAGTGCTTACCATTTGAAT+CGG | - | chr6.3:66666055-66666074 | None:intergenic | 35.0% | |
| TGGTCTACTTACTATGTTGA+CGG | + | chr6.3:66668607-66668626 | MS.gene042864:intron | 35.0% | |
| TGTTATAACACCTCTTATGC+CGG | + | chr6.3:66668418-66668437 | MS.gene042864:CDS | 35.0% | |
| TGTTTCAAAATCAAACCGGA+TGG | - | chr6.3:66669517-66669536 | None:intergenic | 35.0% | |
| TTCTGCAGCAGTTACATTTA+TGG | + | chr6.3:66670344-66670363 | MS.gene042864:CDS | 35.0% | |
| TTGCAGGAACAAATATGCTT+GGG | - | chr6.3:66669630-66669649 | None:intergenic | 35.0% | |
| TTTAGAAAGGTTGTCTGCAA+GGG | + | chr6.3:66668317-66668336 | MS.gene042864:CDS | 35.0% | |
| TTTGCAGGAACAAATATGCT+TGG | - | chr6.3:66669631-66669650 | None:intergenic | 35.0% | |
| ! | AAACTTTTCTTTCCAACTGC+GGG | - | chr6.3:66669148-66669167 | None:intergenic | 35.0% |
| ! | AGCACCAAATTTTCGATCAT+AGG | - | chr6.3:66666907-66666926 | None:intergenic | 35.0% |
| ! | CAATTCTAGTTAACAGAGGA+TGG | + | chr6.3:66669118-66669137 | MS.gene042864:CDS | 35.0% |
| ! | CATAGACAGTATTTTCTGGA+AGG | - | chr6.3:66669714-66669733 | None:intergenic | 35.0% |
| ! | CCCCATCTTTTACAAAAACT+AGG | - | chr6.3:66670084-66670103 | None:intergenic | 35.0% |
| ! | GAATTGTTTGTATTTGGGAC+AGG | + | chr6.3:66670313-66670332 | MS.gene042864:intron | 35.0% |
| ! | TACGTAGACCTTCTCTAAAA+TGG | + | chr6.3:66668587-66668606 | MS.gene042864:intron | 35.0% |
| ! | TCTCCAATTCTAGTTAACAG+AGG | + | chr6.3:66669114-66669133 | MS.gene042864:CDS | 35.0% |
| !! | CAAATTTGGTGCATTGTTAG+CGG | + | chr6.3:66667044-66667063 | MS.gene042864:intron | 35.0% |
| !! | CGCCTAGTTTTTGTAAAAGA+TGG | + | chr6.3:66670079-66670098 | MS.gene042864:intron | 35.0% |
| !! | TCAAGGAGATTTCTAGTCAT+AGG | + | chr6.3:66667859-66667878 | MS.gene042864:intron | 35.0% |
| !! | TGTATTGTTCTGTTTCTGGA+GGG | + | chr6.3:66670197-66670216 | MS.gene042864:intron | 35.0% |
| !! | TTGTATTGTTCTGTTTCTGG+AGG | + | chr6.3:66670196-66670215 | MS.gene042864:intron | 35.0% |
| !!! | TCACTTCCATGTTTTTGAGT+TGG | + | chr6.3:66669028-66669047 | MS.gene042864:intron | 35.0% |
| AAATGGTGGTTGTATCTACC+TGG | + | chr6.3:66666211-66666230 | MS.gene042864:CDS | 40.0% | |
| AGCATCCAATCAACTCACAT+CGG | - | chr6.3:66666462-66666481 | None:intergenic | 40.0% | |
| ATAGATATTGAGCCGCAAGA+AGG | - | chr6.3:66668847-66668866 | None:intergenic | 40.0% | |
| ATATTCGGCTACAGTAGAGA+AGG | - | chr6.3:66667643-66667662 | None:intergenic | 40.0% | |
| ATTCACATTCACTGCGATAC+TGG | + | chr6.3:66667344-66667363 | MS.gene042864:intron | 40.0% | |
| ATTGCAAATTGCGGCTAAAG+CGG | + | chr6.3:66667130-66667149 | MS.gene042864:intron | 40.0% | |
| CACTTTAGTGTTGTAGCTAG+CGG | + | chr6.3:66667153-66667172 | MS.gene042864:intron | 40.0% | |
| CATGCTGAGGTAGATATTTG+TGG | + | chr6.3:66666405-66666424 | MS.gene042864:intron | 40.0% | |
| CATTCACATCCTTAGGAAGA+GGG | - | chr6.3:66669777-66669796 | None:intergenic | 40.0% | |
| CCGTTTCCTTGATATGTAGA+TGG | + | chr6.3:66667908-66667927 | MS.gene042864:intron | 40.0% | |
| CGATAATCAAAGAGTGAACG+TGG | + | chr6.3:66668027-66668046 | MS.gene042864:intron | 40.0% | |
| CTACCTCAGCATGATTTAAG+TGG | - | chr6.3:66666398-66666417 | None:intergenic | 40.0% | |
| CTATCAGGATGATCATGAAC+CGG | - | chr6.3:66668440-66668459 | None:intergenic | 40.0% | |
| GAATCTAACTCCTCACTTGA+TGG | - | chr6.3:66668290-66668309 | None:intergenic | 40.0% | |
| GAGCTCAATTTAGCGCTTAT+TGG | + | chr6.3:66667979-66667998 | MS.gene042864:intron | 40.0% | |
| GATTGGATGCTCGTGTAAAA+AGG | + | chr6.3:66666471-66666490 | MS.gene042864:intron | 40.0% | |
| TAATCCTTACCCTCTTCCTA+AGG | + | chr6.3:66669765-66669784 | MS.gene042864:CDS | 40.0% | |
| TAGATATTGAGCCGCAAGAA+GGG | - | chr6.3:66668846-66668865 | None:intergenic | 40.0% | |
| TCACCATCACTTCAGATTGA+AGG | + | chr6.3:66669963-66669982 | MS.gene042864:intron | 40.0% | |
| TCTACATATCAAGGAAACGG+AGG | - | chr6.3:66667908-66667927 | None:intergenic | 40.0% | |
| TCTTCTTCCTCCGATTCAAA+TGG | + | chr6.3:66666042-66666061 | MS.gene042864:CDS | 40.0% | |
| TTACCAATTGCTTGCTTTGC+AGG | + | chr6.3:66669003-66669022 | MS.gene042864:intron | 40.0% | |
| TTTGTTCCTGCAAATGATCC+CGG | + | chr6.3:66669637-66669656 | MS.gene042864:CDS | 40.0% | |
| TTTGTTCTGTGTTTGTGGTG+AGG | + | chr6.3:66667502-66667521 | MS.gene042864:intron | 40.0% | |
| ! | AACTTTTCTTTCCAACTGCG+GGG | - | chr6.3:66669147-66669166 | None:intergenic | 40.0% |
| ! | ACTTCGTTAGGTGTTACAGA+CGG | - | chr6.3:66669580-66669599 | None:intergenic | 40.0% |
| ! | AGTGGCAGTGTTTTCAATCA+CGG | - | chr6.3:66667210-66667229 | None:intergenic | 40.0% |
| ! | ATCAAGGCATTCACATCCTT+AGG | - | chr6.3:66669784-66669803 | None:intergenic | 40.0% |
| ! | GAATGCCTTGATTCGAAGTT+CGG | + | chr6.3:66669792-66669811 | MS.gene042864:CDS | 40.0% |
| ! | GAGCAATTGCATTTGGTCTT+GGG | + | chr6.3:66666233-66666252 | MS.gene042864:CDS | 40.0% |
| !!! | TGATGTGCTGTGCTATTTTG+CGG | + | chr6.3:66667579-66667598 | MS.gene042864:intron | 40.0% |
| AACCAAACTAGACAGCGAAC+CGG | + | chr6.3:66669373-66669392 | MS.gene042864:intron | 45.0% | |
| AAGCCTGCAAAGCAAGCAAT+TGG | - | chr6.3:66669009-66669028 | None:intergenic | 45.0% | |
| AAGCTGATGGAACCAAATCG+TGG | + | chr6.3:66669220-66669239 | MS.gene042864:CDS | 45.0% | |
| ACACCAACACATGTTGGACA+TGG | - | chr6.3:66669995-66670014 | None:intergenic | 45.0% | |
| ACATATCAAGGAAACGGAGG+AGG | - | chr6.3:66667905-66667924 | None:intergenic | 45.0% | |
| ACATCCTTAGGAAGAGGGTA+AGG | - | chr6.3:66669772-66669791 | None:intergenic | 45.0% | |
| AGACCAAATGCAATTGCTCC+AGG | - | chr6.3:66666232-66666251 | None:intergenic | 45.0% | |
| ATAGAACCACTGAGAAGACC+CGG | - | chr6.3:66669659-66669678 | None:intergenic | 45.0% | |
| ATGTAGTTTAGGTGGTCCTG+AGG | - | chr6.3:66669823-66669842 | None:intergenic | 45.0% | |
| CATCACCGAACTTCGAATCA+AGG | - | chr6.3:66669800-66669819 | None:intergenic | 45.0% | |
| CATTCTGACAACGTGAACCT+CGG | - | chr6.3:66666697-66666716 | None:intergenic | 45.0% | |
| CCAAAATCTCCACCACGATT+TGG | - | chr6.3:66669235-66669254 | None:intergenic | 45.0% | |
| CCATGACTCAAAGATATCGC+CGG | - | chr6.3:66669395-66669414 | None:intergenic | 45.0% | |
| CCTGAAATGCTTCTTGAACG+TGG | - | chr6.3:66668377-66668396 | None:intergenic | 45.0% | |
| CGGTTCATGATCATCCTGAT+AGG | + | chr6.3:66668438-66668457 | MS.gene042864:CDS | 45.0% | |
| CTACCTGGAGCAATTGCATT+TGG | + | chr6.3:66666226-66666245 | MS.gene042864:CDS | 45.0% | |
| CTAGTCATAGGCTCATGTTG+TGG | + | chr6.3:66667871-66667890 | MS.gene042864:intron | 45.0% | |
| CTGCTTCAAACCACTGAACT+AGG | + | chr6.3:66669420-66669439 | MS.gene042864:intron | 45.0% | |
| GCATTCACATCCTTAGGAAG+AGG | - | chr6.3:66669778-66669797 | None:intergenic | 45.0% | |
| GGAAGAGGGTAAGGATTACT+TGG | - | chr6.3:66669763-66669782 | None:intergenic | 45.0% | |
| GGAGCAATTGCATTTGGTCT+TGG | + | chr6.3:66666232-66666251 | MS.gene042864:CDS | 45.0% | |
| GGCTAAGACAGAGTAACAAG+AGG | + | chr6.3:66670376-66670395 | MS.gene042864:CDS | 45.0% | |
| GGGGAAGAGAGATAGAAAGA+AGG | + | chr6.3:66666990-66667009 | MS.gene042864:intron | 45.0% | |
| GTAACACCTAACGAAGTGGT+CGG | + | chr6.3:66669583-66669602 | MS.gene042864:CDS | 45.0% | |
| GTCTGTAACACCTAACGAAG+TGG | + | chr6.3:66669579-66669598 | MS.gene042864:CDS | 45.0% | |
| GTGCTTACCATTTGAATCGG+AGG | - | chr6.3:66666052-66666071 | None:intergenic | 45.0% | |
| GTTCCATGTCCAACATGTGT+TGG | + | chr6.3:66669989-66670008 | MS.gene042864:intron | 45.0% | |
| TAACACCTAACGAAGTGGTC+GGG | + | chr6.3:66669584-66669603 | MS.gene042864:CDS | 45.0% | |
| TCACGGGTCACATGAAATAG+TGG | - | chr6.3:66667193-66667212 | None:intergenic | 45.0% | |
| TCCACTAGATCTGAATTGGC+TGG | - | chr6.3:66667396-66667415 | None:intergenic | 45.0% | |
| TCCAGCCAATTCAGATCTAG+TGG | + | chr6.3:66667392-66667411 | MS.gene042864:intron | 45.0% | |
| TCGACATGTCAGTTTCGTGT+TGG | - | chr6.3:66666593-66666612 | None:intergenic | 45.0% | |
| TGATCATGAACCGGCATAAG+AGG | - | chr6.3:66668431-66668450 | None:intergenic | 45.0% | |
| TGGTGCATATCCATCAAGTG+AGG | + | chr6.3:66668277-66668296 | MS.gene042864:CDS | 45.0% | |
| TGTCCAACACCAACACATGT+TGG | - | chr6.3:66670001-66670020 | None:intergenic | 45.0% | |
| TTGACATTTGTCGGATACCG+AGG | + | chr6.3:66666677-66666696 | MS.gene042864:intron | 45.0% | |
| TTGGTTCCATCAGCTTGTGA+AGG | - | chr6.3:66669216-66669235 | None:intergenic | 45.0% | |
| TTGTTCCTGCAAATGATCCC+GGG | + | chr6.3:66669638-66669657 | MS.gene042864:CDS | 45.0% | |
| ! | ACGCCTTCAATCTGAAGTGA+TGG | - | chr6.3:66669969-66669988 | None:intergenic | 45.0% |
| ! | CTTCGTTAGGTGTTACAGAC+GGG | - | chr6.3:66669579-66669598 | None:intergenic | 45.0% |
| ! | GTGGCAGTGTTTTCAATCAC+GGG | - | chr6.3:66667209-66667228 | None:intergenic | 45.0% |
| ! | TCGGAGGAAGAAGAAAGTGT+TGG | - | chr6.3:66666036-66666055 | None:intergenic | 45.0% |
| ! | TGTCCAACATGTGTTGGTGT+TGG | + | chr6.3:66669995-66670014 | MS.gene042864:intron | 45.0% |
| ! | TTGATTCTGAGAAAGGGGGA+AGG | + | chr6.3:66666726-66666745 | MS.gene042864:intron | 45.0% |
| !! | CCAAATCGTGGTGGAGATTT+TGG | + | chr6.3:66669232-66669251 | MS.gene042864:CDS | 45.0% |
| !! | CCACGTTCAAGAAGCATTTC+AGG | + | chr6.3:66668374-66668393 | MS.gene042864:CDS | 45.0% |
| !! | CGGAGGAAGAAGAAAGTGTT+GGG | - | chr6.3:66666035-66666054 | None:intergenic | 45.0% |
| !! | GGAAGAAGAAAGTGTTGGGT+CGG | - | chr6.3:66666031-66666050 | None:intergenic | 45.0% |
| !! | TGACACCGATGTGAGTTGAT+TGG | + | chr6.3:66666454-66666473 | MS.gene042864:intron | 45.0% |
| !! | TTGCATTTGGTCTTGGGAGT+TGG | + | chr6.3:66666239-66666258 | MS.gene042864:CDS | 45.0% |
| !! | AAATAAATAATAAACATATT+CGG | - | chr6.3:66667658-66667677 | None:intergenic | 5.0% |
| !!! | AATTAGTTTTTTTTTTTTTT+TGG | + | chr6.3:66666633-66666652 | MS.gene042864:intron | 5.0% |
| AAACAAGAACGACCCGCATG+AGG | - | chr6.3:66666099-66666118 | None:intergenic | 50.0% | |
| AACACCTAACGAAGTGGTCG+GGG | + | chr6.3:66669585-66669604 | MS.gene042864:CDS | 50.0% | |
| AACCAACACTGTCTGCGGAT+CGG | - | chr6.3:66669475-66669494 | None:intergenic | 50.0% | |
| CATTGCTCGTTTACAGGACC+AGG | + | chr6.3:66669552-66669571 | MS.gene042864:intron | 50.0% | |
| CCATCAGCTTGTGAAGGTGA+AGG | - | chr6.3:66669210-66669229 | None:intergenic | 50.0% | |
| CCGGCGATATCTTTGAGTCA+TGG | + | chr6.3:66669392-66669411 | MS.gene042864:intron | 50.0% | |
| CCTTCACCTTCACAAGCTGA+TGG | + | chr6.3:66669207-66669226 | MS.gene042864:CDS | 50.0% | |
| CGAAACTGACATGTCGACAC+CGG | + | chr6.3:66666596-66666615 | MS.gene042864:intron | 50.0% | |
| CTGATGGAACCAAATCGTGG+TGG | + | chr6.3:66669223-66669242 | MS.gene042864:CDS | 50.0% | |
| CTGCGGATCGGTTATTTGAG+CGG | - | chr6.3:66669463-66669482 | None:intergenic | 50.0% | |
| CTTCAGCTGGTTGAACCATC+CGG | + | chr6.3:66669499-66669518 | MS.gene042864:intron | 50.0% | |
| GCAGTTTCGTCCTAGTTCAG+TGG | - | chr6.3:66669433-66669452 | None:intergenic | 50.0% | |
| GCTTGTGAAGGTGAAGGAAG+TGG | - | chr6.3:66669204-66669223 | None:intergenic | 50.0% | |
| GTGTGAACCAACACTGTCTG+CGG | - | chr6.3:66669480-66669499 | None:intergenic | 50.0% | |
| TAGAACCACTGAGAAGACCC+GGG | - | chr6.3:66669658-66669677 | None:intergenic | 50.0% | |
| TCGAGGGAAGAGGTTGCAAA+TGG | + | chr6.3:66668238-66668257 | MS.gene042864:CDS | 50.0% | |
| TGTTGGGTCGGAATCAGAGA+CGG | - | chr6.3:66666019-66666038 | None:intergenic | 50.0% | |
| ! | TTTCTGGAAGGCCGCAAGAT+CGG | - | chr6.3:66669702-66669721 | None:intergenic | 50.0% |
| !! | GTGTTGGTTCACACTTCAGC+TGG | + | chr6.3:66669486-66669505 | MS.gene042864:intron | 50.0% |
| !! | TGTCAGCGTCGTGTTGGTTT+CGG | - | chr6.3:66666825-66666844 | None:intergenic | 50.0% |
| !! | TGTTGGAGTATCGAGGGAAG+AGG | + | chr6.3:66668228-66668247 | MS.gene042864:CDS | 50.0% |
| AACCGATCCGCAGACAGTGT+TGG | + | chr6.3:66669470-66669489 | MS.gene042864:intron | 55.0% | |
| ACTACCCCGACCACTTCGTT+AGG | - | chr6.3:66669592-66669611 | None:intergenic | 55.0% | |
| AGAGCTGAATGGACGGACAG+CGG | - | chr6.3:66665989-66666008 | None:intergenic | 55.0% | |
| ATGATCCCGGGTCTTCTCAG+TGG | + | chr6.3:66669650-66669669 | MS.gene042864:CDS | 55.0% | |
| CAGCAGCAGAGCTGAATGGA+CGG | - | chr6.3:66665996-66666015 | None:intergenic | 55.0% | |
| CCTAGCATTGCCCGATCTTG+CGG | + | chr6.3:66669688-66669707 | MS.gene042864:CDS | 55.0% | |
| GAAGACCCGGGATCATTTGC+AGG | - | chr6.3:66669646-66669665 | None:intergenic | 55.0% | |
| ! | TAGGTGTTACAGACGGGACC+TGG | - | chr6.3:66669573-66669592 | None:intergenic | 55.0% |
| ! | TCGAAGTTCGGTGATGCCTC+AGG | + | chr6.3:66669804-66669823 | MS.gene042864:CDS | 55.0% |
| ! | TCGACTTGTCAGCGTCGTGT+TGG | - | chr6.3:66666831-66666850 | None:intergenic | 55.0% |
| ! | TTCTGGAAGGCCGCAAGATC+GGG | - | chr6.3:66669701-66669720 | None:intergenic | 55.0% |
| ACGGACAGCGGAGCTTATGC+CGG | - | chr6.3:66665977-66665996 | None:intergenic | 60.0% | |
| ACGGCAGCAGCAGAGCTGAA+TGG | - | chr6.3:66666000-66666019 | None:intergenic | 60.0% | |
| CCGCAAGATCGGGCAATGCT+AGG | - | chr6.3:66669691-66669710 | None:intergenic | 60.0% | |
| CGACGCTGACAAGTCGACAC+TGG | + | chr6.3:66666834-66666853 | MS.gene042864:intron | 60.0% | |
| GAAGTGGTCGGGGTAGTTCG+CGG | + | chr6.3:66669595-66669614 | MS.gene042864:CDS | 60.0% | |
| GAGCTCCGCAAGGATTCTGG+CGG | - | chr6.3:66665935-66665954 | None:intergenic | 60.0% | |
| !! | CGCCGGTTCGCTGTCTAGTT+TGG | - | chr6.3:66669378-66669397 | None:intergenic | 60.0% |
| AAGGATTCTGGCGGCGGAGG+TGG | - | chr6.3:66665926-66665945 | None:intergenic | 65.0% | |
| AGATACGGCGGAGCTCCGCA+AGG | - | chr6.3:66665945-66665964 | None:intergenic | 65.0% | |
| AGCGGAGCTTATGCCGGTGC+GGG | - | chr6.3:66665971-66665990 | None:intergenic | 65.0% | |
| ATTCTGGCGGCGGAGGTGGA+TGG | - | chr6.3:66665922-66665941 | None:intergenic | 65.0% | |
| CAGCGGAGCTTATGCCGGTG+CGG | - | chr6.3:66665972-66665991 | None:intergenic | 65.0% | |
| CTCCGCAAGGATTCTGGCGG+CGG | - | chr6.3:66665932-66665951 | None:intergenic | 65.0% | |
| CTCCGCCGCCAGAATCCTTG+CGG | + | chr6.3:66665927-66665946 | MS.gene042864:CDS | 65.0% | |
| GCGGAGCTCCGCAAGGATTC+TGG | - | chr6.3:66665938-66665957 | None:intergenic | 65.0% | |
| TGCCGGTGCGGGTGGAGATA+CGG | - | chr6.3:66665960-66665979 | None:intergenic | 65.0% | |
| ! | GAGGATGGGTTCCCCGCAGT+TGG | + | chr6.3:66669133-66669152 | MS.gene042864:CDS | 65.0% |
| CGCAAGGATTCTGGCGGCGG+AGG | - | chr6.3:66665929-66665948 | None:intergenic | 70.0% | |
| CGCCGTATCTCCACCCGCAC+CGG | + | chr6.3:66665955-66665974 | MS.gene042864:CDS | 70.0% | |
| CGGTGCGGGTGGAGATACGG+CGG | - | chr6.3:66665957-66665976 | None:intergenic | 70.0% | |
| GGAGCTTATGCCGGTGCGGG+TGG | - | chr6.3:66665968-66665987 | None:intergenic | 70.0% | |
| CTGGCGGCGGAGGTGGATGG+TGG | - | chr6.3:66665919-66665938 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 66665913 | 66670404 | 66665913 | ID=MS.gene042864 |
| chr6.3 | mRNA | 66665913 | 66670404 | 66665913 | ID=MS.gene042864.t1;Parent=MS.gene042864 |
| chr6.3 | exon | 66665913 | 66666063 | 66665913 | ID=MS.gene042864.t1.exon1;Parent=MS.gene042864.t1 |
| chr6.3 | CDS | 66665913 | 66666063 | 66665913 | ID=cds.MS.gene042864.t1;Parent=MS.gene042864.t1 |
| chr6.3 | exon | 66666200 | 66666285 | 66666200 | ID=MS.gene042864.t1.exon2;Parent=MS.gene042864.t1 |
| chr6.3 | CDS | 66666200 | 66666285 | 66666200 | ID=cds.MS.gene042864.t1;Parent=MS.gene042864.t1 |
| chr6.3 | exon | 66668221 | 66668459 | 66668221 | ID=MS.gene042864.t1.exon3;Parent=MS.gene042864.t1 |
| chr6.3 | CDS | 66668221 | 66668459 | 66668221 | ID=cds.MS.gene042864.t1;Parent=MS.gene042864.t1 |
| chr6.3 | exon | 66669107 | 66669278 | 66669107 | ID=MS.gene042864.t1.exon4;Parent=MS.gene042864.t1 |
| chr6.3 | CDS | 66669107 | 66669278 | 66669107 | ID=cds.MS.gene042864.t1;Parent=MS.gene042864.t1 |
| chr6.3 | exon | 66669568 | 66669851 | 66669568 | ID=MS.gene042864.t1.exon5;Parent=MS.gene042864.t1 |
| chr6.3 | CDS | 66669568 | 66669851 | 66669568 | ID=cds.MS.gene042864.t1;Parent=MS.gene042864.t1 |
| chr6.3 | exon | 66670335 | 66670404 | 66670335 | ID=MS.gene042864.t1.exon6;Parent=MS.gene042864.t1 |
| chr6.3 | CDS | 66670335 | 66670404 | 66670335 | ID=cds.MS.gene042864.t1;Parent=MS.gene042864.t1 |
| Gene Sequence |
| Protein sequence |
