Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65650.t1 | XP_003614571.1 | 100 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 1.50E-58 | 235.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65650.t1 | Q17Q89 | 44.6 | 121 | 67 | 0 | 9 | 129 | 5 | 125 | 1.2e-19 | 97.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65650.t1 | G7K0G0 | 100.0 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 1.1e-58 | 235.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049756 | MS.gene65650 | 0.826364 | 2.82E-54 | -1.69E-46 |
| MS.gene049825 | MS.gene65650 | 0.832825 | 7.58E-56 | -1.69E-46 |
| MS.gene049873 | MS.gene65650 | 0.806242 | 9.05E-50 | -1.69E-46 |
| MS.gene050277 | MS.gene65650 | 0.805218 | 1.48E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene65650 | 0.833959 | 3.95E-56 | -1.69E-46 |
| MS.gene050355 | MS.gene65650 | 0.817592 | 3.05E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene65650 | 0.854867 | 9.24E-62 | -1.69E-46 |
| MS.gene050721 | MS.gene65650 | 0.85879 | 6.47E-63 | -1.69E-46 |
| MS.gene050724 | MS.gene65650 | 0.835079 | 2.07E-56 | -1.69E-46 |
| MS.gene050780 | MS.gene65650 | 0.803029 | 4.24E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene65650 | 0.812937 | 3.30E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene65650 | 0.801056 | 1.08E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene65650 | 0.820876 | 5.44E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene65650 | 0.819881 | 9.20E-53 | -1.69E-46 |
| MS.gene051746 | MS.gene65650 | 0.80448 | 2.12E-49 | -1.69E-46 |
| MS.gene051757 | MS.gene65650 | 0.806775 | 6.98E-50 | -1.69E-46 |
| MS.gene052012 | MS.gene65650 | 0.802975 | 4.35E-49 | -1.69E-46 |
| MS.gene052286 | MS.gene65650 | 0.807494 | 4.92E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene65650 | 0.801869 | 7.34E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene65650 | 0.812159 | 4.88E-51 | -1.69E-46 |
| MS.gene052384 | MS.gene65650 | 0.81335 | 2.68E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene65650 | 0.807915 | 4.00E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene65650 | 0.804863 | 1.76E-49 | -1.69E-46 |
| MS.gene053294 | MS.gene65650 | 0.804741 | 1.87E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene65650 | 0.807917 | 4.00E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene65650 | 0.827005 | 1.99E-54 | -1.69E-46 |
| MS.gene055778 | MS.gene65650 | 0.814975 | 1.17E-51 | -1.69E-46 |
| MS.gene056091 | MS.gene65650 | 0.825916 | 3.61E-54 | -1.69E-46 |
| MS.gene056631 | MS.gene65650 | 0.82342 | 1.40E-53 | -1.69E-46 |
| MS.gene056986 | MS.gene65650 | 0.802631 | 5.12E-49 | -1.69E-46 |
| MS.gene057079 | MS.gene65650 | 0.823795 | 1.14E-53 | -1.69E-46 |
| MS.gene057140 | MS.gene65650 | 0.809294 | 2.03E-50 | -1.69E-46 |
| MS.gene057555 | MS.gene65650 | 0.800247 | 1.58E-48 | -1.69E-46 |
| MS.gene057693 | MS.gene65650 | 0.817816 | 2.71E-52 | -1.69E-46 |
| MS.gene05795 | MS.gene65650 | 0.80094 | 1.14E-48 | -1.69E-46 |
| MS.gene058037 | MS.gene65650 | 0.804933 | 1.70E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene65650 | 0.840625 | 7.77E-58 | -1.69E-46 |
| MS.gene058238 | MS.gene65650 | 0.812404 | 4.31E-51 | -1.69E-46 |
| MS.gene058636 | MS.gene65650 | 0.82075 | 5.82E-53 | -1.69E-46 |
| MS.gene058906 | MS.gene65650 | 0.85202 | 6.07E-61 | -1.69E-46 |
| MS.gene059249 | MS.gene65650 | 0.816512 | 5.32E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene65650 | 0.828517 | 8.61E-55 | -1.69E-46 |
| MS.gene059830 | MS.gene65650 | 0.816456 | 5.48E-52 | -1.69E-46 |
| MS.gene06001 | MS.gene65650 | 0.822789 | 1.96E-53 | -1.69E-46 |
| MS.gene060429 | MS.gene65650 | 0.821904 | 3.15E-53 | -1.69E-46 |
| MS.gene060572 | MS.gene65650 | 0.833463 | 5.26E-56 | -1.69E-46 |
| MS.gene060586 | MS.gene65650 | 0.857997 | 1.11E-62 | -1.69E-46 |
| MS.gene060619 | MS.gene65650 | 0.820366 | 7.13E-53 | -1.69E-46 |
| MS.gene060907 | MS.gene65650 | 0.823109 | 1.65E-53 | -1.69E-46 |
| MS.gene061040 | MS.gene65650 | -0.835067 | 2.08E-56 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65650.t1 | MTR_5g055650 | 100.000 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 5.71e-88 | 251 |
| MS.gene65650.t1 | MTR_3g462870 | 84.211 | 38 | 6 | 0 | 92 | 129 | 92 | 129 | 5.96e-13 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65650.t1 | AT1G29990 | 86.047 | 129 | 18 | 0 | 1 | 129 | 1 | 129 | 3.20e-77 | 224 |
Find 22 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGCCACGGTTCAAGATT+TGG | 0.316433 | 5.2:+47496417 | MS.gene65650:CDS |
| TGTACTTGTTAAGCAAGATT+TGG | 0.330090 | 5.2:+47492711 | MS.gene65650:CDS |
| ACAAAAGATGCAATCTCTTC+AGG | 0.356299 | 5.2:+47497401 | MS.gene65650:CDS |
| CGAAAATGAGCTCGTTCTTA+AGG | 0.364571 | 5.2:+47492209 | MS.gene65650:CDS |
| TAGAGATCTTCAACGCGAAT+TGG | 0.368259 | 5.2:+47492010 | MS.gene65650:CDS |
| GCAAATGTTTACAAGTTGAT+TGG | 0.380956 | 5.2:+47492685 | MS.gene65650:CDS |
| CGATCTCAACAAGCTTCAAA+AGG | 0.400711 | 5.2:+47492046 | MS.gene65650:CDS |
| AAGATGCAATCTCTTCAGGC+TGG | 0.480196 | 5.2:+47497405 | MS.gene65650:CDS |
| TCTCTTGCGGACATTTGCAT+TGG | 0.483042 | 5.2:-47492740 | None:intergenic |
| CAATCTCTTCAGGCTGGGAA+AGG | 0.495242 | 5.2:+47497411 | MS.gene65650:CDS |
| AATCTCTTCAGGCTGGGAAA+GGG | 0.515494 | 5.2:+47497412 | MS.gene65650:CDS |
| AAATCTTGCTTAACAAGTAC+AGG | 0.520028 | 5.2:-47492709 | None:intergenic |
| AAATGTATTCAATTCTCTTG+CGG | 0.528071 | 5.2:-47492753 | None:intergenic |
| GATCTCAACAAGCTTCAAAA+GGG | 0.534109 | 5.2:+47492047 | MS.gene65650:CDS |
| GCAGAATAGCAAGAAAGAAA+CGG | 0.544496 | 5.2:+47496447 | MS.gene65650:CDS |
| CTCTTCCAAATCTTGAACCG+TGG | 0.545459 | 5.2:-47496422 | None:intergenic |
| AGATGCAATCTCTTCAGGCT+GGG | 0.569375 | 5.2:+47497406 | MS.gene65650:CDS |
| CAGGAAGCGTCTTGATGCCA+CGG | 0.578703 | 5.2:+47496405 | MS.gene65650:intron |
| TGTTAAGCAAGATTTGGCTG+AGG | 0.593363 | 5.2:+47492717 | MS.gene65650:CDS |
| GCGTTGAAGATCTCTAATGT+TGG | 0.594934 | 5.2:-47492003 | None:intergenic |
| AAGAAGTACACTATTCAACT+TGG | 0.603063 | 5.2:+47492186 | MS.gene65650:CDS |
| TCTTCAGGCTGGGAAAGGGA+AGG | 0.633958 | 5.2:+47497416 | MS.gene65650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTTATTCATAGATAAAA+GGG | + | chr5.2:47493131-47493150 | MS.gene65650:intron | 10.0% |
| !!! | AATAAAATTCTAAAACAAAA+TGG | - | chr5.2:47495192-47495211 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTCTTTCAAT+AGG | + | chr5.2:47492639-47492658 | MS.gene65650:intron | 10.0% |
| !! | AAATAATCACTTCAAAATAT+TGG | + | chr5.2:47493015-47493034 | MS.gene65650:intron | 15.0% |
| !! | AATAATTACAGAATAACATT+TGG | + | chr5.2:47496525-47496544 | MS.gene65650:intron | 15.0% |
| !! | ATAAGATAATATGATGAATA+TGG | + | chr5.2:47494014-47494033 | MS.gene65650:intron | 15.0% |
| !! | GTAATTTATTCATAGATAAA+AGG | + | chr5.2:47493130-47493149 | MS.gene65650:intron | 15.0% |
| !! | TAAAATTATGTATTAGCAAA+AGG | + | chr5.2:47493708-47493727 | MS.gene65650:intron | 15.0% |
| !! | TATGTGTGTTATAATAAATA+AGG | + | chr5.2:47496166-47496185 | MS.gene65650:intron | 15.0% |
| !! | TTGTAAGTTAGTAATTAATT+GGG | + | chr5.2:47496005-47496024 | MS.gene65650:intron | 15.0% |
| !! | TTTGTAAGTTAGTAATTAAT+TGG | + | chr5.2:47496004-47496023 | MS.gene65650:intron | 15.0% |
| !!! | ATTCTAAAATGACATAATTT+GGG | - | chr5.2:47497046-47497065 | None:intergenic | 15.0% |
| !!! | ATTTTGTATTCTAAAATATC+AGG | + | chr5.2:47495621-47495640 | MS.gene65650:intron | 15.0% |
| !!! | CAAACTTTTTTTTTAAATCT+CGG | - | chr5.2:47492407-47492426 | None:intergenic | 15.0% |
| !!! | CTATTTTTTCGTTATTATTT+TGG | + | chr5.2:47493096-47493115 | MS.gene65650:intron | 15.0% |
| !!! | GTTATTTATTTTCTTGATTT+TGG | + | chr5.2:47492802-47492821 | MS.gene65650:intron | 15.0% |
| !!! | TATTCTAAAATGACATAATT+TGG | - | chr5.2:47497047-47497066 | None:intergenic | 15.0% |
| !!! | TGTATTTAATTTTTCTTAAG+AGG | + | chr5.2:47497216-47497235 | MS.gene65650:intron | 15.0% |
| !!! | TTAAAAAGTATATTCTATCT+TGG | + | chr5.2:47497186-47497205 | MS.gene65650:intron | 15.0% |
| !!! | TTTTGTATTCTAAAATATCA+GGG | + | chr5.2:47495622-47495641 | MS.gene65650:intron | 15.0% |
| !! | AAAACCCTAAAATACATAAA+AGG | - | chr5.2:47492238-47492257 | None:intergenic | 20.0% |
| !! | AAAATGGAAATAAACTCTTT+AGG | - | chr5.2:47493213-47493232 | None:intergenic | 20.0% |
| !! | AAACCCTAAAATACATAAAA+GGG | - | chr5.2:47492237-47492256 | None:intergenic | 20.0% |
| !! | AAATTAAAGGAAAGATATGT+TGG | + | chr5.2:47496028-47496047 | MS.gene65650:intron | 20.0% |
| !! | ATAATACATATTGTTCGATA+TGG | + | chr5.2:47495162-47495181 | MS.gene65650:intron | 20.0% |
| !! | ATGTTTAATTACATCAGTAT+TGG | + | chr5.2:47495591-47495610 | MS.gene65650:intron | 20.0% |
| !! | GTAATTAATTGGGAAATTAA+AGG | + | chr5.2:47496015-47496034 | MS.gene65650:intron | 20.0% |
| !! | TAACATAACAAAAAATAGCA+AGG | + | chr5.2:47494600-47494619 | MS.gene65650:intron | 20.0% |
| !! | TACAAAAATAAGGATGAAAA+TGG | + | chr5.2:47493461-47493480 | MS.gene65650:intron | 20.0% |
| !! | TAGTTAAGTATGTTTATAAG+AGG | - | chr5.2:47494407-47494426 | None:intergenic | 20.0% |
| !! | TTATAAACATACTTAACTAG+TGG | + | chr5.2:47494408-47494427 | MS.gene65650:intron | 20.0% |
| !! | TTGTAGTAGATAAATAACTT+TGG | + | chr5.2:47493810-47493829 | MS.gene65650:intron | 20.0% |
| !!! | ACGAAACAGATAATTTTTTT+AGG | - | chr5.2:47492855-47492874 | None:intergenic | 20.0% |
| !!! | ATGTAACATTTTTTACTTAG+CGG | - | chr5.2:47495909-47495928 | None:intergenic | 20.0% |
| !!! | ATTTATTTTCTTGATTTTGG+AGG | + | chr5.2:47492805-47492824 | MS.gene65650:intron | 20.0% |
| !!! | GAATAGTGGTATATTAATTT+TGG | + | chr5.2:47494040-47494059 | MS.gene65650:intron | 20.0% |
| !!! | GACTTTTAAATTATTTCTCA+TGG | + | chr5.2:47496500-47496519 | MS.gene65650:intron | 20.0% |
| !!! | TATTATTTTGGATGAAGAAT+AGG | + | chr5.2:47493108-47493127 | MS.gene65650:intron | 20.0% |
| !!! | TGATTAAACATTTTAAGAAG+TGG | + | chr5.2:47494995-47495014 | MS.gene65650:intron | 20.0% |
| !!! | TGGTAATTTTTGATACATTT+AGG | + | chr5.2:47492520-47492539 | MS.gene65650:intron | 20.0% |
| !!! | TTAGAGAAATATGTTGTTTA+AGG | + | chr5.2:47493346-47493365 | MS.gene65650:intron | 20.0% |
| !!! | TTAGTTTGATAACTAGAATT+AGG | + | chr5.2:47492478-47492497 | MS.gene65650:intron | 20.0% |
| !!! | TTTGTATTTCAAGTTCTTAT+TGG | + | chr5.2:47495130-47495149 | MS.gene65650:intron | 20.0% |
| ! | AAAAACTAGTTCATCGTTAT+AGG | - | chr5.2:47493246-47493265 | None:intergenic | 25.0% |
| ! | AAATGTATTCAATTCTCTTG+CGG | - | chr5.2:47492756-47492775 | None:intergenic | 25.0% |
| ! | AACAATGAATTTGACTATCT+TGG | + | chr5.2:47493184-47493203 | MS.gene65650:intron | 25.0% |
| ! | AAGATTAGATACACTTCTAA+CGG | + | chr5.2:47496257-47496276 | MS.gene65650:intron | 25.0% |
| ! | AATAAAACAGTATCACAATG+AGG | - | chr5.2:47495868-47495887 | None:intergenic | 25.0% |
| ! | AATTCATTGTTTGTAAGTAC+AGG | - | chr5.2:47493175-47493194 | None:intergenic | 25.0% |
| ! | AGTATATGATTTGATTCATC+TGG | + | chr5.2:47492899-47492918 | MS.gene65650:intron | 25.0% |
| ! | ATAAAACAGTATCACAATGA+GGG | - | chr5.2:47495867-47495886 | None:intergenic | 25.0% |
| ! | ATCAACAAAAATCAAGTCTA+TGG | - | chr5.2:47493303-47493322 | None:intergenic | 25.0% |
| ! | ATCATCATCATCATCATATA+TGG | + | chr5.2:47496371-47496390 | MS.gene65650:intron | 25.0% |
| ! | ATCCTGAGATAAATACATTT+AGG | - | chr5.2:47495224-47495243 | None:intergenic | 25.0% |
| ! | GAAATACAAAGAGAGTAAAT+TGG | - | chr5.2:47495120-47495139 | None:intergenic | 25.0% |
| ! | GATAATATGATGAATATGGA+TGG | + | chr5.2:47494018-47494037 | MS.gene65650:intron | 25.0% |
| ! | TAAGTATGTTTATAAGAGGA+GGG | - | chr5.2:47494403-47494422 | None:intergenic | 25.0% |
| ! | TACCTAAATGTATTTATCTC+AGG | + | chr5.2:47495219-47495238 | MS.gene65650:intron | 25.0% |
| ! | TAGAATTAGGATACAAACTA+AGG | + | chr5.2:47492491-47492510 | MS.gene65650:intron | 25.0% |
| ! | TTAAGTATGTTTATAAGAGG+AGG | - | chr5.2:47494404-47494423 | None:intergenic | 25.0% |
| ! | TTCGTTGAGATACAAATAAA+CGG | - | chr5.2:47497106-47497125 | None:intergenic | 25.0% |
| ! | TTGATTAAAAAGTAACCACT+TGG | + | chr5.2:47492957-47492976 | MS.gene65650:intron | 25.0% |
| ! | TTTATCTACTACAATCTACA+AGG | - | chr5.2:47493804-47493823 | None:intergenic | 25.0% |
| !! | AAAAAGATGAACGATTTTGA+AGG | - | chr5.2:47492123-47492142 | None:intergenic | 25.0% |
| !! | AGAAATATGTTGTTTAAGGA+TGG | + | chr5.2:47493350-47493369 | MS.gene65650:intron | 25.0% |
| !! | AGAATCATTTGGTTAGTTAT+AGG | - | chr5.2:47494709-47494728 | None:intergenic | 25.0% |
| !! | CTTCATTTTAGATCTTGTTA+TGG | + | chr5.2:47496299-47496318 | MS.gene65650:intron | 25.0% |
| !! | GAAATATGTTGTTTAAGGAT+GGG | + | chr5.2:47493351-47493370 | MS.gene65650:intron | 25.0% |
| !! | GTACCCTTTTATGTATTTTA+GGG | + | chr5.2:47492231-47492250 | MS.gene65650:intron | 25.0% |
| !! | TTGATTTTCGAATGTGTATT+CGG | + | chr5.2:47492451-47492470 | MS.gene65650:intron | 25.0% |
| !!! | AACATGAAAGTGTTGAAATT+TGG | - | chr5.2:47495576-47495595 | None:intergenic | 25.0% |
| !!! | AAGAACTTTTTCTTCTCTAT+AGG | - | chr5.2:47494685-47494704 | None:intergenic | 25.0% |
| !!! | ACATGAAAGTGTTGAAATTT+GGG | - | chr5.2:47495575-47495594 | None:intergenic | 25.0% |
| !!! | TCATCCTTATTTTTGTACAA+TGG | - | chr5.2:47493458-47493477 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTTCAATAGGAGT+TGG | + | chr5.2:47492645-47492664 | MS.gene65650:intron | 25.0% |
| AAATCTTGCTTAACAAGTAC+AGG | - | chr5.2:47492712-47492731 | None:intergenic | 30.0% | |
| AACCACTTGGAATGTTTATT+AGG | + | chr5.2:47492970-47492989 | MS.gene65650:intron | 30.0% | |
| AAGTATGTTTATAAGAGGAG+GGG | - | chr5.2:47494402-47494421 | None:intergenic | 30.0% | |
| AATAATCTCCTTGGAGAAAA+TGG | + | chr5.2:47494089-47494108 | MS.gene65650:intron | 30.0% | |
| ACAAAGAAACAAAGATCAAG+AGG | - | chr5.2:47495334-47495353 | None:intergenic | 30.0% | |
| ACCACTTGGAATGTTTATTA+GGG | + | chr5.2:47492971-47492990 | MS.gene65650:intron | 30.0% | |
| AGAGGAGAACTCTAATATAA+GGG | - | chr5.2:47494761-47494780 | None:intergenic | 30.0% | |
| AGCAGACGATTAAACTTTAT+CGG | + | chr5.2:47493756-47493775 | MS.gene65650:intron | 30.0% | |
| AGGTATCTTGAAGAATCATT+TGG | - | chr5.2:47494720-47494739 | None:intergenic | 30.0% | |
| ATCAAGCAAAATAATGCAGA+AGG | - | chr5.2:47496708-47496727 | None:intergenic | 30.0% | |
| CAATTGAAAATGGAAAGAAC+AGG | - | chr5.2:47493957-47493976 | None:intergenic | 30.0% | |
| CACATACAACAATACAACAT+AGG | - | chr5.2:47496152-47496171 | None:intergenic | 30.0% | |
| CATGGCTATACAATTGAAAA+TGG | - | chr5.2:47493967-47493986 | None:intergenic | 30.0% | |
| CCAAATTAGCATGTCTTTAT+AGG | + | chr5.2:47497291-47497310 | MS.gene65650:intron | 30.0% | |
| CCTATAAAGACATGCTAATT+TGG | - | chr5.2:47497294-47497313 | None:intergenic | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr5.2:47495503-47495522 | MS.gene65650:intron | 30.0% | |
| GCTTCCATTGTACAAAAATA+AGG | + | chr5.2:47493451-47493470 | MS.gene65650:intron | 30.0% | |
| GGACAAACAAAATATTCTAG+AGG | - | chr5.2:47497025-47497044 | None:intergenic | 30.0% | |
| TAAAACAGTATCACAATGAG+GGG | - | chr5.2:47495866-47495885 | None:intergenic | 30.0% | |
| TACAAAGAGAGTAAATTGGT+AGG | - | chr5.2:47495116-47495135 | None:intergenic | 30.0% | |
| TACATTTGATGAGCTTACAA+TGG | - | chr5.2:47493542-47493561 | None:intergenic | 30.0% | |
| TATAGGCTGCAAGAAAAAAA+TGG | - | chr5.2:47493229-47493248 | None:intergenic | 30.0% | |
| TCGTTGAGATACAAATAAAC+GGG | - | chr5.2:47497105-47497124 | None:intergenic | 30.0% | |
| TCTACCAAACATACATTTAG+AGG | - | chr5.2:47496573-47496592 | None:intergenic | 30.0% | |
| TCTTGTGTAGAAACACAATA+AGG | - | chr5.2:47496872-47496891 | None:intergenic | 30.0% | |
| TGTCTAATCACATGCATTTA+CGG | - | chr5.2:47493895-47493914 | None:intergenic | 30.0% | |
| TTACATTAAGAGACCAAAAC+AGG | + | chr5.2:47495923-47495942 | MS.gene65650:intron | 30.0% | |
| TTCTACTTAACTACTCTACT+TGG | + | chr5.2:47497141-47497160 | MS.gene65650:intron | 30.0% | |
| TTCTTTGTGAAACTTTCTGT+TGG | + | chr5.2:47495346-47495365 | MS.gene65650:intron | 30.0% | |
| TTGAAAACCTTCCACATATT+GGG | + | chr5.2:47494846-47494865 | MS.gene65650:intron | 30.0% | |
| TTGGTAGAACAACATTTAGT+GGG | + | chr5.2:47496585-47496604 | MS.gene65650:intron | 30.0% | |
| TTTGAAAACCTTCCACATAT+TGG | + | chr5.2:47494845-47494864 | MS.gene65650:intron | 30.0% | |
| TTTGGTAGAACAACATTTAG+TGG | + | chr5.2:47496584-47496603 | MS.gene65650:intron | 30.0% | |
| ! | AAGAAGTACACTATTCAACT+TGG | + | chr5.2:47492186-47492205 | MS.gene65650:CDS | 30.0% |
| ! | AAGATATGTTGGTCAGTTTT+TGG | + | chr5.2:47496039-47496058 | MS.gene65650:intron | 30.0% |
| ! | AGAACATAGAAGTGTAGAAA+AGG | + | chr5.2:47496770-47496789 | MS.gene65650:intron | 30.0% |
| ! | ATAACTTTGGCTAGTTAGTT+TGG | + | chr5.2:47493823-47493842 | MS.gene65650:intron | 30.0% |
| ! | ATAGTTTTCCATTTTCTCCA+AGG | - | chr5.2:47494100-47494119 | None:intergenic | 30.0% |
| ! | ATTAGCAAAAGGTGTATGTT+AGG | + | chr5.2:47493719-47493738 | MS.gene65650:intron | 30.0% |
| ! | CAAAAACCAAACCATCATTT+TGG | - | chr5.2:47492583-47492602 | None:intergenic | 30.0% |
| ! | CTAAGTTTCACTGATTGTTA+TGG | + | chr5.2:47492603-47492622 | MS.gene65650:intron | 30.0% |
| ! | GAACATAGAAGTGTAGAAAA+GGG | + | chr5.2:47496771-47496790 | MS.gene65650:intron | 30.0% |
| ! | GGTACCCTTTTATGTATTTT+AGG | + | chr5.2:47492230-47492249 | MS.gene65650:intron | 30.0% |
| ! | TGTACTTGTTAAGCAAGATT+TGG | + | chr5.2:47492711-47492730 | MS.gene65650:CDS | 30.0% |
| ! | TTATTGTGTTTCTACACAAG+AGG | + | chr5.2:47496871-47496890 | MS.gene65650:intron | 30.0% |
| !! | CATGAAAGTGTTGAAATTTG+GGG | - | chr5.2:47495574-47495593 | None:intergenic | 30.0% |
| !! | CTCATATTATGTGTCGTTTA+AGG | - | chr5.2:47497255-47497274 | None:intergenic | 30.0% |
| !! | GCAAATGTTTACAAGTTGAT+TGG | + | chr5.2:47492685-47492704 | MS.gene65650:CDS | 30.0% |
| !! | TGAACGATTTTGAAGGAATT+TGG | - | chr5.2:47492116-47492135 | None:intergenic | 30.0% |
| !! | TTTTAAGAAGTGGAGAGTTT+AGG | + | chr5.2:47495005-47495024 | MS.gene65650:intron | 30.0% |
| !! | TTTTACCAAGCTTGTTCTTA+AGG | + | chr5.2:47492274-47492293 | MS.gene65650:intron | 30.0% |
| !!! | GTGATACTGTTTTATTTTGC+TGG | + | chr5.2:47495872-47495891 | MS.gene65650:intron | 30.0% |
| AAAGGAAGAGAGTAAAGAGA+AGG | + | chr5.2:47494950-47494969 | MS.gene65650:intron | 35.0% | |
| AAGGAAGAGAGTAAAGAGAA+GGG | + | chr5.2:47494951-47494970 | MS.gene65650:intron | 35.0% | |
| ACAAAAGATGCAATCTCTTC+AGG | + | chr5.2:47497401-47497420 | MS.gene65650:CDS | 35.0% | |
| ACTGTCTTCATCTTTCGTAT+AGG | + | chr5.2:47493682-47493701 | MS.gene65650:intron | 35.0% | |
| AGAGAGTAAATTGGTAGGAA+CGG | - | chr5.2:47495111-47495130 | None:intergenic | 35.0% | |
| ATAATCAGATTGACCCTGAT+AGG | - | chr5.2:47494434-47494453 | None:intergenic | 35.0% | |
| ATATATGGTCTTTGTGTGTC+AGG | + | chr5.2:47496386-47496405 | MS.gene65650:intron | 35.0% | |
| ATGATTTGATTCATCTGGCA+CGG | + | chr5.2:47492904-47492923 | MS.gene65650:intron | 35.0% | |
| ATGCATGTGATTAGACATAC+TGG | + | chr5.2:47493898-47493917 | MS.gene65650:intron | 35.0% | |
| ATTTAGTCCCAATGATAGAC+AGG | + | chr5.2:47495477-47495496 | MS.gene65650:intron | 35.0% | |
| CAACATAAACCACACTAACA+GGG | - | chr5.2:47494886-47494905 | None:intergenic | 35.0% | |
| CAAGCTTTCAATACTTGGAA+GGG | + | chr5.2:47496089-47496108 | MS.gene65650:intron | 35.0% | |
| CAAGGAAAATGCTGTAAAGA+AGG | + | chr5.2:47494618-47494637 | MS.gene65650:intron | 35.0% | |
| CAGAGGAGAACTCTAATATA+AGG | - | chr5.2:47494762-47494781 | None:intergenic | 35.0% | |
| CAGTGAAGTAATACAATGGA+TGG | + | chr5.2:47494064-47494083 | MS.gene65650:intron | 35.0% | |
| CCACTTGGAATGTTTATTAG+GGG | + | chr5.2:47492972-47492991 | MS.gene65650:intron | 35.0% | |
| CGTTGAGATACAAATAAACG+GGG | - | chr5.2:47497104-47497123 | None:intergenic | 35.0% | |
| CTGTTAGTGTGGTTTATGTT+GGG | + | chr5.2:47494885-47494904 | MS.gene65650:intron | 35.0% | |
| CTTTCTATGCTTCACAATAG+CGG | - | chr5.2:47493573-47493592 | None:intergenic | 35.0% | |
| GAATCCAATAAGTAGAGAGA+AGG | - | chr5.2:47494232-47494251 | None:intergenic | 35.0% | |
| GACTACCATATATAAGACAC+AGG | - | chr5.2:47496612-47496631 | None:intergenic | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | + | chr5.2:47495506-47495525 | MS.gene65650:intron | 35.0% | |
| GAGTTTAGGTCTCTTGAAAA+TGG | + | chr5.2:47495019-47495038 | MS.gene65650:intron | 35.0% | |
| GATACAAACTAAGGATGCAT+TGG | + | chr5.2:47492500-47492519 | MS.gene65650:intron | 35.0% | |
| GATCTCAACAAGCTTCAAAA+GGG | + | chr5.2:47492047-47492066 | MS.gene65650:CDS | 35.0% | |
| GATGAATATGGATGGAATAG+TGG | + | chr5.2:47494026-47494045 | MS.gene65650:intron | 35.0% | |
| GATTCCAAGCTTTCAATACT+TGG | + | chr5.2:47496084-47496103 | MS.gene65650:intron | 35.0% | |
| GATTTGCACAAAGCACAAAT+AGG | - | chr5.2:47495713-47495732 | None:intergenic | 35.0% | |
| GCAGAATAGCAAGAAAGAAA+CGG | + | chr5.2:47496447-47496466 | MS.gene65650:CDS | 35.0% | |
| GGTCTGCTAAATAAAGATAC+AGG | + | chr5.2:47493777-47493796 | MS.gene65650:intron | 35.0% | |
| GTATTTATCTCAGGATGTCT+TGG | + | chr5.2:47495228-47495247 | MS.gene65650:intron | 35.0% | |
| GTTGAGATACAAATAAACGG+GGG | - | chr5.2:47497103-47497122 | None:intergenic | 35.0% | |
| TACGAAAGATGAAGACAGTA+AGG | - | chr5.2:47493681-47493700 | None:intergenic | 35.0% | |
| TAGCTATACATTTGCATACG+TGG | + | chr5.2:47493050-47493069 | MS.gene65650:intron | 35.0% | |
| TAGGCCTCTAAATGTATGTT+TGG | + | chr5.2:47496566-47496585 | MS.gene65650:intron | 35.0% | |
| TATGACTAGAGCCTATAACA+AGG | + | chr5.2:47493638-47493657 | MS.gene65650:intron | 35.0% | |
| TCAAAAGAAGTAGGAATGAG+CGG | - | chr5.2:47494830-47494849 | None:intergenic | 35.0% | |
| TGCATGTGATTAGACATACT+GGG | + | chr5.2:47493899-47493918 | MS.gene65650:intron | 35.0% | |
| TGGAAATTCCGCTTTAATTG+TGG | + | chr5.2:47495366-47495385 | MS.gene65650:intron | 35.0% | |
| TGGACAGTGAAGTAATACAA+TGG | + | chr5.2:47494060-47494079 | MS.gene65650:intron | 35.0% | |
| TGTGGAGTTATTAGGAAATG+AGG | - | chr5.2:47494189-47494208 | None:intergenic | 35.0% | |
| TTAGGACCAAAATGATGGTT+TGG | + | chr5.2:47492574-47492593 | MS.gene65650:intron | 35.0% | |
| TTCAAAAAAAATCACGCACC+AGG | - | chr5.2:47496671-47496690 | None:intergenic | 35.0% | |
| TTGAGTACATCATACTCTCA+TGG | - | chr5.2:47493985-47494004 | None:intergenic | 35.0% | |
| TTGTGAAGCATAGAAAGAGT+CGG | + | chr5.2:47493576-47493595 | MS.gene65650:intron | 35.0% | |
| ! | CACATTTAGGACCAAAATGA+TGG | + | chr5.2:47492569-47492588 | MS.gene65650:intron | 35.0% |
| ! | CTTGTCAAATTCTTTTGACC+AGG | + | chr5.2:47495803-47495822 | MS.gene65650:intron | 35.0% |
| ! | GGAAGGTTTTCAAAAGAAGT+AGG | - | chr5.2:47494839-47494858 | None:intergenic | 35.0% |
| ! | TTTTGGTCCTAAATGTGTGA+TGG | - | chr5.2:47492566-47492585 | None:intergenic | 35.0% |
| !! | GTTCTTAAGGTACCCTTTTA+GGG | + | chr5.2:47492222-47492241 | MS.gene65650:intron | 35.0% |
| !! | TGTTCTTAAGGTACCCTTTT+AGG | + | chr5.2:47492286-47492305 | MS.gene65650:intron | 35.0% |
| !! | TTTTGGTTAAGGAGTTGGAA+GGG | + | chr5.2:47496056-47496075 | MS.gene65650:intron | 35.0% |
| !!! | AACAACCCTCGTTTTTTAGT+CGG | - | chr5.2:47495757-47495776 | None:intergenic | 35.0% |
| !!! | TCAGTTTTTGGTTAAGGAGT+TGG | + | chr5.2:47496051-47496070 | MS.gene65650:intron | 35.0% |
| !!! | TGTTGGTCAGTTTTTGGTTA+AGG | + | chr5.2:47496045-47496064 | MS.gene65650:intron | 35.0% |
| !!! | TTTTTGGTTAAGGAGTTGGA+AGG | + | chr5.2:47496055-47496074 | MS.gene65650:intron | 35.0% |
| AAACCCAAAGGTCGCAATTT+AGG | - | chr5.2:47495406-47495425 | None:intergenic | 40.0% | |
| AAACTTCCAAATCAGCAGAC+TGG | - | chr5.2:47495300-47495319 | None:intergenic | 40.0% | |
| AACAGTGCCATCACACATTT+AGG | + | chr5.2:47492556-47492575 | MS.gene65650:intron | 40.0% | |
| AAGCAGAGGATTAAACCTTC+TGG | + | chr5.2:47494920-47494939 | MS.gene65650:intron | 40.0% | |
| AATGCACACTAACTGTCCTA+AGG | - | chr5.2:47495960-47495979 | None:intergenic | 40.0% | |
| ACCAAAGAAAACAGAGGCTA+TGG | - | chr5.2:47494491-47494510 | None:intergenic | 40.0% | |
| ACTTAACTAGTGGCCTATCA+GGG | + | chr5.2:47494418-47494437 | MS.gene65650:intron | 40.0% | |
| AGAATAACAGAATGGACAGG+TGG | - | chr5.2:47494294-47494313 | None:intergenic | 40.0% | |
| AGAGAAGACGCTCAAGTATT+AGG | - | chr5.2:47494363-47494382 | None:intergenic | 40.0% | |
| AGCAGAGGATTAAACCTTCT+GGG | + | chr5.2:47494921-47494940 | MS.gene65650:intron | 40.0% | |
| AGGGATTTGAGGATCATGAT+TGG | - | chr5.2:47494266-47494285 | None:intergenic | 40.0% | |
| AGGTGTATGTTAGGAGAGAT+AGG | + | chr5.2:47493728-47493747 | MS.gene65650:intron | 40.0% | |
| ATGTGATTAGACATACTGGG+AGG | + | chr5.2:47493902-47493921 | MS.gene65650:intron | 40.0% | |
| ATTGAAGCCAGAACAAAGCT+CGG | - | chr5.2:47492323-47492342 | None:intergenic | 40.0% | |
| CAACACAAGTCAACATTTGG+TGG | - | chr5.2:47493387-47493406 | None:intergenic | 40.0% | |
| CAAGAGTCCTGTCTATCATT+GGG | - | chr5.2:47495487-47495506 | None:intergenic | 40.0% | |
| CAATAAGTAGAGAGAAGGAG+GGG | - | chr5.2:47494227-47494246 | None:intergenic | 40.0% | |
| CCAACATAAACCACACTAAC+AGG | - | chr5.2:47494887-47494906 | None:intergenic | 40.0% | |
| CCAAGCTTTCAATACTTGGA+AGG | + | chr5.2:47496088-47496107 | MS.gene65650:intron | 40.0% | |
| CCAATAAGTAGAGAGAAGGA+GGG | - | chr5.2:47494228-47494247 | None:intergenic | 40.0% | |
| CCCCTAATAAACATTCCAAG+TGG | - | chr5.2:47492975-47492994 | None:intergenic | 40.0% | |
| CCTCAACACAAGTCAACATT+TGG | - | chr5.2:47493390-47493409 | None:intergenic | 40.0% | |
| CCTGTTAGTGTGGTTTATGT+TGG | + | chr5.2:47494884-47494903 | MS.gene65650:intron | 40.0% | |
| CGAAAATGAGCTCGTTCTTA+AGG | + | chr5.2:47492209-47492228 | MS.gene65650:CDS | 40.0% | |
| CGATCTCAACAAGCTTCAAA+AGG | + | chr5.2:47492046-47492065 | MS.gene65650:CDS | 40.0% | |
| CGTACAATACACGAAATGGT+GGG | - | chr5.2:47496846-47496865 | None:intergenic | 40.0% | |
| CTAAAAAACGAGGGTTGTTG+AGG | + | chr5.2:47495758-47495777 | MS.gene65650:intron | 40.0% | |
| CTAGGAAGGGAATGAAAGAA+AGG | + | chr5.2:47493860-47493879 | MS.gene65650:intron | 40.0% | |
| CTGTAAAGAAGGAAACACAG+CGG | + | chr5.2:47494629-47494648 | MS.gene65650:intron | 40.0% | |
| CTTTCTTTCATTCCCTTCCT+AGG | - | chr5.2:47493862-47493881 | None:intergenic | 40.0% | |
| GAAAACAGAGGCTATGGTAT+TGG | - | chr5.2:47494485-47494504 | None:intergenic | 40.0% | |
| GAATTGTTGTCACACCAGTA+GGG | - | chr5.2:47494157-47494176 | None:intergenic | 40.0% | |
| GAGAGTAAATTGGTAGGAAC+GGG | - | chr5.2:47495110-47495129 | None:intergenic | 40.0% | |
| GCAAGAATAACAGAATGGAC+AGG | - | chr5.2:47494297-47494316 | None:intergenic | 40.0% | |
| GCGTTGAAGATCTCTAATGT+TGG | - | chr5.2:47492006-47492025 | None:intergenic | 40.0% | |
| GGAATTGAAACCATATGGCA+GGG | - | chr5.2:47494809-47494828 | None:intergenic | 40.0% | |
| GGTATGAACTGACCCTAAAA+GGG | - | chr5.2:47492302-47492321 | None:intergenic | 40.0% | |
| GTAGATCCTAGCTACTAGAT+AGG | + | chr5.2:47496547-47496566 | MS.gene65650:intron | 40.0% | |
| GTGGTTTATGTTGGGAAAGT+TGG | + | chr5.2:47494893-47494912 | MS.gene65650:intron | 40.0% | |
| GTTGAATGATCAGCACATTG+AGG | - | chr5.2:47494525-47494544 | None:intergenic | 40.0% | |
| TACTTAACTAGTGGCCTATC+AGG | + | chr5.2:47494417-47494436 | MS.gene65650:intron | 40.0% | |
| TAGAGATCTTCAACGCGAAT+TGG | + | chr5.2:47492010-47492029 | MS.gene65650:CDS | 40.0% | |
| TATAAGAGGAGGGGTAAAAG+AGG | - | chr5.2:47494393-47494412 | None:intergenic | 40.0% | |
| TATGTTAGGAGAGATAGGAG+AGG | + | chr5.2:47493733-47493752 | MS.gene65650:intron | 40.0% | |
| TCAAGAGTCCTGTCTATCAT+TGG | - | chr5.2:47495488-47495507 | None:intergenic | 40.0% | |
| TCCAATAAGTAGAGAGAAGG+AGG | - | chr5.2:47494229-47494248 | None:intergenic | 40.0% | |
| TGAATTGTTGTCACACCAGT+AGG | - | chr5.2:47494158-47494177 | None:intergenic | 40.0% | |
| TGAGCGGAATTGAAACCATA+TGG | - | chr5.2:47494814-47494833 | None:intergenic | 40.0% | |
| TGATTTGATTCATCTGGCAC+GGG | + | chr5.2:47492905-47492924 | MS.gene65650:intron | 40.0% | |
| TGGATGGAGAATAATCTCCT+TGG | + | chr5.2:47494080-47494099 | MS.gene65650:intron | 40.0% | |
| TGGGAGTAAAAGAAGGAGAA+AGG | - | chr5.2:47494332-47494351 | None:intergenic | 40.0% | |
| TGGGTCCTGTGTCTTATATA+TGG | + | chr5.2:47496604-47496623 | MS.gene65650:intron | 40.0% | |
| TGTAATGAAGGCAAACCCAA+AGG | - | chr5.2:47495418-47495437 | None:intergenic | 40.0% | |
| TGTTAAGCAAGATTTGGCTG+AGG | + | chr5.2:47492717-47492736 | MS.gene65650:CDS | 40.0% | |
| ! | ACCATAGCCTCTGTTTTCTT+TGG | + | chr5.2:47494487-47494506 | MS.gene65650:intron | 40.0% |
| ! | AGGATAGATGTTGGTTAGCA+TGG | - | chr5.2:47495833-47495852 | None:intergenic | 40.0% |
| ! | ATAGCCTCTGTTTTCTTTGG+TGG | + | chr5.2:47494490-47494509 | MS.gene65650:intron | 40.0% |
| ! | CTTTGGCTAGTTAGTTTGGA+AGG | + | chr5.2:47493827-47493846 | MS.gene65650:intron | 40.0% |
| !! | AACAAAGATCAAGAGGTGTC+AGG | - | chr5.2:47495327-47495346 | None:intergenic | 40.0% |
| !! | ACAAAGATCAAGAGGTGTCA+GGG | - | chr5.2:47495326-47495345 | None:intergenic | 40.0% |
| !! | AGCTTTGTTCTGGCTTCAAT+TGG | + | chr5.2:47492323-47492342 | MS.gene65650:intron | 40.0% |
| !! | CCAAATGTTGACTTGTGTTG+AGG | + | chr5.2:47493387-47493406 | MS.gene65650:intron | 40.0% |
| !! | CCTTCCAAGTATTGAAAGCT+TGG | - | chr5.2:47496091-47496110 | None:intergenic | 40.0% |
| !! | CTACACAAGAGGTTGTTTTC+AGG | + | chr5.2:47496882-47496901 | MS.gene65650:intron | 40.0% |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr5.2:47495449-47495468 | MS.gene65650:intron | 40.0% |
| !! | GCTTTGTTCTGGCTTCAATT+GGG | + | chr5.2:47492324-47492343 | MS.gene65650:intron | 40.0% |
| !! | TCTCGGATTAGTTGGTCTTT+GGG | + | chr5.2:47492374-47492393 | MS.gene65650:intron | 40.0% |
| !! | TGGTTTTGCAAGGATGAGTT+AGG | + | chr5.2:47495548-47495567 | MS.gene65650:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr5.2:47495450-47495469 | MS.gene65650:intron | 40.0% |
| !! | TTGACTTGTGTTGAGGAGTT+TGG | + | chr5.2:47493394-47493413 | MS.gene65650:intron | 40.0% |
| !!! | ACAACCCTCGTTTTTTAGTC+GGG | - | chr5.2:47495756-47495775 | None:intergenic | 40.0% |
| AAACCTTCTGGGTCAGTCAA+AGG | + | chr5.2:47494932-47494951 | MS.gene65650:intron | 45.0% | |
| AAATCAGCAGACTGGAAAGC+AGG | - | chr5.2:47495292-47495311 | None:intergenic | 45.0% | |
| AACCTTCCACATATTGGGCA+TGG | + | chr5.2:47494851-47494870 | MS.gene65650:intron | 45.0% | |
| AAGATGCAATCTCTTCAGGC+TGG | + | chr5.2:47497405-47497424 | MS.gene65650:CDS | 45.0% | |
| AATCAGCAGACTGGAAAGCA+GGG | - | chr5.2:47495291-47495310 | None:intergenic | 45.0% | |
| AATCTCTTCAGGCTGGGAAA+GGG | + | chr5.2:47497412-47497431 | MS.gene65650:CDS | 45.0% | |
| ACAACTTTATCGTTGCGCCA+AGG | + | chr5.2:47496972-47496991 | MS.gene65650:intron | 45.0% | |
| ACACACACTGTGTTCGGAAA+GGG | + | chr5.2:47496818-47496837 | MS.gene65650:intron | 45.0% | |
| ACAGTAAGGTTGCTGCCTTA+AGG | - | chr5.2:47493667-47493686 | None:intergenic | 45.0% | |
| ACAGTATCACAATGAGGGGA+AGG | - | chr5.2:47495862-47495881 | None:intergenic | 45.0% | |
| ACCTTCCACATATTGGGCAT+GGG | + | chr5.2:47494852-47494871 | MS.gene65650:intron | 45.0% | |
| AGATGCAATCTCTTCAGGCT+GGG | + | chr5.2:47497406-47497425 | MS.gene65650:CDS | 45.0% | |
| AGGACAGCAAGGATAGATGT+TGG | - | chr5.2:47495842-47495861 | None:intergenic | 45.0% | |
| AGGGGGCAAGAATAACAGAA+TGG | - | chr5.2:47494302-47494321 | None:intergenic | 45.0% | |
| ATATGGCAGGGAGTTTGAGA+GGG | - | chr5.2:47494797-47494816 | None:intergenic | 45.0% | |
| CAAAACCAGCTTGTAAGGTG+AGG | - | chr5.2:47495536-47495555 | None:intergenic | 45.0% | |
| CAAGCCCGACTAAAAAACGA+GGG | + | chr5.2:47495749-47495768 | MS.gene65650:intron | 45.0% | |
| CAAGTATTAGGAGGACAGCT+GGG | - | chr5.2:47494351-47494370 | None:intergenic | 45.0% | |
| CCCTCCTTCTCTCTACTTAT+TGG | + | chr5.2:47494225-47494244 | MS.gene65650:intron | 45.0% | |
| CCTATAACAAGGAGGCCTTA+AGG | + | chr5.2:47493649-47493668 | MS.gene65650:intron | 45.0% | |
| CCTCAAAGCCAACACAATGA+AGG | - | chr5.2:47495451-47495470 | None:intergenic | 45.0% | |
| CCTTGCAAAACCAGCTTGTA+AGG | - | chr5.2:47495541-47495560 | None:intergenic | 45.0% | |
| CGGAATTGAAACCATATGGC+AGG | - | chr5.2:47494810-47494829 | None:intergenic | 45.0% | |
| CGGTATGAACTGACCCTAAA+AGG | - | chr5.2:47492303-47492322 | None:intergenic | 45.0% | |
| CGTCCAAAGATTTGCGAGAA+GGG | - | chr5.2:47494560-47494579 | None:intergenic | 45.0% | |
| CTCCAACACCTTCATTGTGT+TGG | + | chr5.2:47495440-47495459 | MS.gene65650:intron | 45.0% | |
| CTCTTCCAAATCTTGAACCG+TGG | - | chr5.2:47496425-47496444 | None:intergenic | 45.0% | |
| CTTAGTTTACCCATGTCGAG+TGG | + | chr5.2:47493604-47493623 | MS.gene65650:intron | 45.0% | |
| CTTCAATTGGGTTCTGCTAG+TGG | + | chr5.2:47492336-47492355 | MS.gene65650:intron | 45.0% | |
| CTTGTGACCTTTCAGTCACA+TGG | + | chr5.2:47496947-47496966 | MS.gene65650:intron | 45.0% | |
| GAAGACGCTCAAGTATTAGG+AGG | - | chr5.2:47494360-47494379 | None:intergenic | 45.0% | |
| GACTAGAGCCTATAACAAGG+AGG | + | chr5.2:47493641-47493660 | MS.gene65650:intron | 45.0% | |
| GAGGAGTTTGGATAGTGTGT+AGG | + | chr5.2:47493406-47493425 | MS.gene65650:intron | 45.0% | |
| GATGCCACCAAAGAAAACAG+AGG | - | chr5.2:47494497-47494516 | None:intergenic | 45.0% | |
| GCGTACAATACACGAAATGG+TGG | - | chr5.2:47496847-47496866 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACGAAA+TGG | - | chr5.2:47496850-47496869 | None:intergenic | 45.0% | |
| GGATCATGATTGGAGTGCAA+AGG | - | chr5.2:47494256-47494275 | None:intergenic | 45.0% | |
| GGGGAGTTTGTGGAGTTATT+AGG | - | chr5.2:47494197-47494216 | None:intergenic | 45.0% | |
| GGGTACCTTAAGAACAAGCT+TGG | - | chr5.2:47492282-47492301 | None:intergenic | 45.0% | |
| GTCTTAATGCCATCCCTGTT+CGG | + | chr5.2:47496629-47496648 | MS.gene65650:intron | 45.0% | |
| GTTGTTGCCATGTGACTGAA+AGG | - | chr5.2:47496922-47496941 | None:intergenic | 45.0% | |
| TAGAGGCCTATCTAGTAGCT+AGG | - | chr5.2:47496556-47496575 | None:intergenic | 45.0% | |
| TCAAGTATTAGGAGGACAGC+TGG | - | chr5.2:47494352-47494371 | None:intergenic | 45.0% | |
| TCACCCTTCTCGCAAATCTT+TGG | + | chr5.2:47494554-47494573 | MS.gene65650:intron | 45.0% | |
| TCGCCTAAATTGCGACCTTT+GGG | + | chr5.2:47495400-47495419 | MS.gene65650:intron | 45.0% | |
| TCGTCCAAAGATTTGCGAGA+AGG | - | chr5.2:47494561-47494580 | None:intergenic | 45.0% | |
| TCTCTTGCGGACATTTGCAT+TGG | - | chr5.2:47492743-47492762 | None:intergenic | 45.0% | |
| TGAAACGAAAGAGAGAGCCT+TGG | - | chr5.2:47496992-47497011 | None:intergenic | 45.0% | |
| TGATGCCACGGTTCAAGATT+TGG | + | chr5.2:47496417-47496436 | MS.gene65650:CDS | 45.0% | |
| TGATTAGACATACTGGGAGG+AGG | + | chr5.2:47493905-47493924 | MS.gene65650:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | - | chr5.2:47495445-47495464 | None:intergenic | 45.0% |
| ! | CCTTAAGGCCTCCTTGTTAT+AGG | - | chr5.2:47493652-47493671 | None:intergenic | 45.0% |
| ! | TCTCTATAGGAGTCTAGCTC+TGG | - | chr5.2:47494672-47494691 | None:intergenic | 45.0% |
| ! | TGCTTTCCAGTCTGCTGATT+TGG | + | chr5.2:47495291-47495310 | MS.gene65650:intron | 45.0% |
| ! | TGGCTAGTTAGTTTGGAAGG+AGG | + | chr5.2:47493830-47493849 | MS.gene65650:intron | 45.0% |
| !! | AGAGGCTATGGTATTGGTAG+TGG | - | chr5.2:47494479-47494498 | None:intergenic | 45.0% |
| !! | ATGGTATTGGTAGTGGCTCT+GGG | - | chr5.2:47494472-47494491 | None:intergenic | 45.0% |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr5.2:47495442-47495461 | None:intergenic | 45.0% |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | + | chr5.2:47495448-47495467 | MS.gene65650:intron | 45.0% |
| !! | CTCTCGGATTAGTTGGTCTT+TGG | + | chr5.2:47492373-47492392 | MS.gene65650:intron | 45.0% |
| !! | GATTGGTCTCTCGGATTAGT+TGG | + | chr5.2:47492366-47492385 | MS.gene65650:intron | 45.0% |
| !! | GTTCATACCGAGCTTTGTTC+TGG | + | chr5.2:47492313-47492332 | MS.gene65650:intron | 45.0% |
| !! | TATGGTATTGGTAGTGGCTC+TGG | - | chr5.2:47494473-47494492 | None:intergenic | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr5.2:47495451-47495470 | MS.gene65650:intron | 45.0% |
| !!! | CCTTACAAGCTGGTTTTGCA+AGG | + | chr5.2:47495538-47495557 | MS.gene65650:intron | 45.0% |
| !!! | CTCGTTTTTTAGTCGGGCTT+GGG | - | chr5.2:47495750-47495769 | None:intergenic | 45.0% |
| AAGTAGAGAGAAGGAGGGGA+AGG | - | chr5.2:47494223-47494242 | None:intergenic | 50.0% | |
| AAGTGTAGAAAAGGGCAGCC+CGG | + | chr5.2:47496779-47496798 | MS.gene65650:intron | 50.0% | |
| ACCCATGTCGAGTGGTTGTT+CGG | + | chr5.2:47493612-47493631 | MS.gene65650:intron | 50.0% | |
| ACTGTCCTAAGGACCAGTTC+AGG | - | chr5.2:47495949-47495968 | None:intergenic | 50.0% | |
| AGACCAAAACAGGCCTGAAC+TGG | + | chr5.2:47495933-47495952 | MS.gene65650:intron | 50.0% | |
| AGAGAAGGAGGGGAAGGAAA+GGG | - | chr5.2:47494217-47494236 | None:intergenic | 50.0% | |
| AGGTCGCAATTTAGGCGACT+AGG | - | chr5.2:47495398-47495417 | None:intergenic | 50.0% | |
| ATTCAAGGGAACAGCCGAAC+AGG | - | chr5.2:47496646-47496665 | None:intergenic | 50.0% | |
| CAATCTCTTCAGGCTGGGAA+AGG | + | chr5.2:47497411-47497430 | MS.gene65650:CDS | 50.0% | |
| CACACACACTGTGTTCGGAA+AGG | + | chr5.2:47496817-47496836 | MS.gene65650:intron | 50.0% | |
| CACACACTGTGTTCGGAAAG+GGG | + | chr5.2:47496819-47496838 | MS.gene65650:intron | 50.0% | |
| CATATGGCAGGGAGTTTGAG+AGG | - | chr5.2:47494798-47494817 | None:intergenic | 50.0% | |
| CCAAGCCCGACTAAAAAACG+AGG | + | chr5.2:47495748-47495767 | MS.gene65650:intron | 50.0% | |
| CCATGTGACTGAAAGGTCAC+GGG | - | chr5.2:47496915-47496934 | None:intergenic | 50.0% | |
| CTCTCAAACTCCCTGCCATA+TGG | + | chr5.2:47494796-47494815 | MS.gene65650:intron | 50.0% | |
| CTTCCTTTGACTGACCCAGA+AGG | - | chr5.2:47494938-47494957 | None:intergenic | 50.0% | |
| GCCATGTGACTGAAAGGTCA+CGG | - | chr5.2:47496916-47496935 | None:intergenic | 50.0% | |
| GGAAAGTTGGACAGAAGCAG+AGG | + | chr5.2:47494906-47494925 | MS.gene65650:intron | 50.0% | |
| GGACAGCTGGGAGTAAAAGA+AGG | - | chr5.2:47494339-47494358 | None:intergenic | 50.0% | |
| GGTCGCAATTTAGGCGACTA+GGG | - | chr5.2:47495397-47495416 | None:intergenic | 50.0% | |
| GTCGCAATTTAGGCGACTAG+GGG | - | chr5.2:47495396-47495415 | None:intergenic | 50.0% | |
| GTCGCCTAAATTGCGACCTT+TGG | + | chr5.2:47495399-47495418 | MS.gene65650:intron | 50.0% | |
| TATGGCAGGGAGTTTGAGAG+GGG | - | chr5.2:47494796-47494815 | None:intergenic | 50.0% | |
| TGTTCGGCTGTTCCCTTGAA+TGG | + | chr5.2:47496645-47496664 | MS.gene65650:intron | 50.0% | |
| TTCAAGGGAACAGCCGAACA+GGG | - | chr5.2:47496645-47496664 | None:intergenic | 50.0% | |
| TTCCGAACACAGTGTGTGTG+CGG | - | chr5.2:47496817-47496836 | None:intergenic | 50.0% | |
| ! | AAGGAGAAAGGTGTGCACAG+GGG | - | chr5.2:47494320-47494339 | None:intergenic | 50.0% |
| ! | AGAAGGAGAAAGGTGTGCAC+AGG | - | chr5.2:47494322-47494341 | None:intergenic | 50.0% |
| ! | CTGCTAGTGGACAGTTGGAT+TGG | + | chr5.2:47492349-47492368 | MS.gene65650:intron | 50.0% |
| ! | GAAGGAGAAAGGTGTGCACA+GGG | - | chr5.2:47494321-47494340 | None:intergenic | 50.0% |
| ! | GCAGAATCACTGGCTGGAAA+TGG | - | chr5.2:47495264-47495283 | None:intergenic | 50.0% |
| ! | GCAGGGTTTTGCAGAATCAC+TGG | - | chr5.2:47495274-47495293 | None:intergenic | 50.0% |
| ! | GGTGCTGAGAAGAGAGAGAA+AGG | - | chr5.2:47494740-47494759 | None:intergenic | 50.0% |
| ! | GGTGTTGGAGGCTGTAATGA+AGG | - | chr5.2:47495430-47495449 | None:intergenic | 50.0% |
| ! | GGTTTTGCAGAATCACTGGC+TGG | - | chr5.2:47495270-47495289 | None:intergenic | 50.0% |
| !! | AAGGAGGAGAGTACCTAGGA+AGG | + | chr5.2:47493846-47493865 | MS.gene65650:intron | 50.0% |
| !! | AGGAGGAGAGTACCTAGGAA+GGG | + | chr5.2:47493847-47493866 | MS.gene65650:intron | 50.0% |
| !! | GGACAGTTGGATTGGTCTCT+CGG | + | chr5.2:47492357-47492376 | MS.gene65650:intron | 50.0% |
| !! | GGATTAGTTGGTCTTTGGGC+TGG | + | chr5.2:47492378-47492397 | MS.gene65650:intron | 50.0% |
| !! | TCACTATGAGAGCACCCTAC+TGG | + | chr5.2:47494140-47494159 | MS.gene65650:intron | 50.0% |
| !! | TGGCTCTGGGGAGAAAGAAA+TGG | - | chr5.2:47494459-47494478 | None:intergenic | 50.0% |
| !! | TGGTATTGGTAGTGGCTCTG+GGG | - | chr5.2:47494471-47494490 | None:intergenic | 50.0% |
| !! | TTGGAAGGAGGAGAGTACCT+AGG | + | chr5.2:47493842-47493861 | MS.gene65650:intron | 50.0% |
| !!! | CCTCGTTTTTTAGTCGGGCT+TGG | - | chr5.2:47495751-47495770 | None:intergenic | 50.0% |
| ACAGGCCTGAACTGGTCCTT+AGG | + | chr5.2:47495941-47495960 | MS.gene65650:intron | 55.0% | |
| AGAATGGACAGGTGGCAAGC+AGG | - | chr5.2:47494286-47494305 | None:intergenic | 55.0% | |
| AGCAGCCCATGCCCAATATG+TGG | - | chr5.2:47494860-47494879 | None:intergenic | 55.0% | |
| AGCCGAACAACCACTCGACA+TGG | - | chr5.2:47493617-47493636 | None:intergenic | 55.0% | |
| AGGTGGCAAGCAGGGATTTG+AGG | - | chr5.2:47494277-47494296 | None:intergenic | 55.0% | |
| ATCACGCACCAGGCCATTCA+AGG | - | chr5.2:47496661-47496680 | None:intergenic | 55.0% | |
| CAATGAGGGGAAGGACAGCA+AGG | - | chr5.2:47495853-47495872 | None:intergenic | 55.0% | |
| CCCGTGACCTTTCAGTCACA+TGG | + | chr5.2:47496912-47496931 | MS.gene65650:intron | 55.0% | |
| GAATGGACAGGTGGCAAGCA+GGG | - | chr5.2:47494285-47494304 | None:intergenic | 55.0% | |
| GAGAAGGAGGGGAAGGAAAG+GGG | - | chr5.2:47494216-47494235 | None:intergenic | 55.0% | |
| GAGAGAAGGAGGGGAAGGAA+AGG | - | chr5.2:47494218-47494237 | None:intergenic | 55.0% | |
| GCAATTTAGGCGACTAGGGG+CGG | - | chr5.2:47495393-47495412 | None:intergenic | 55.0% | |
| GCACTCCTCACCTTACAAGC+TGG | + | chr5.2:47495528-47495547 | MS.gene65650:intron | 55.0% | |
| GCCCATGCCCAATATGTGGA+AGG | - | chr5.2:47494856-47494875 | None:intergenic | 55.0% | |
| GCCGAACAACCACTCGACAT+GGG | - | chr5.2:47493616-47493635 | None:intergenic | 55.0% | |
| GCTGCTTCTCCCTGTTAGTG+TGG | + | chr5.2:47494874-47494893 | MS.gene65650:intron | 55.0% | |
| GGGAAGGAAAGGGGAGTTTG+TGG | - | chr5.2:47494207-47494226 | None:intergenic | 55.0% | |
| GGGGCGGACCACAATTAAAG+CGG | - | chr5.2:47495377-47495396 | None:intergenic | 55.0% | |
| GTTGGTTAGCATGGTGTGCC+TGG | - | chr5.2:47495824-47495843 | None:intergenic | 55.0% | |
| TCACGCACCAGGCCATTCAA+GGG | - | chr5.2:47496660-47496679 | None:intergenic | 55.0% | |
| TCCCGCACACACACTGTGTT+CGG | + | chr5.2:47496812-47496831 | MS.gene65650:intron | 55.0% | |
| TCCGAACACAGTGTGTGTGC+GGG | - | chr5.2:47496816-47496835 | None:intergenic | 55.0% | |
| TCTTCAGGCTGGGAAAGGGA+AGG | + | chr5.2:47497416-47497435 | MS.gene65650:CDS | 55.0% | |
| ! | AGGAGAAAGGTGTGCACAGG+GGG | - | chr5.2:47494319-47494338 | None:intergenic | 55.0% |
| ! | GGACCAGTTCAGGCCTGTTT+TGG | - | chr5.2:47495939-47495958 | None:intergenic | 55.0% |
| ! | GGGTTCTGCTAGTGGACAGT+TGG | + | chr5.2:47492344-47492363 | MS.gene65650:intron | 55.0% |
| !! | AGGAGTCTAGCTCTGGCAGT+AGG | - | chr5.2:47494665-47494684 | None:intergenic | 55.0% |
| !! | CAGGAAGCGTCTTGATGCCA+CGG | + | chr5.2:47496405-47496424 | MS.gene65650:intron | 55.0% |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr5.2:47495454-47495473 | MS.gene65650:intron | 55.0% |
| AGGGAACAGCCGAACAGGGA+TGG | - | chr5.2:47496641-47496660 | None:intergenic | 60.0% | |
| GAGGGGAGCAAACAGTGCAG+AGG | - | chr5.2:47494779-47494798 | None:intergenic | 60.0% | |
| GGCTGTTCCCTTGAATGGCC+TGG | + | chr5.2:47496650-47496669 | MS.gene65650:intron | 60.0% | |
| ! | TGTGCGGGAGCTTTGTGCAC+CGG | - | chr5.2:47496801-47496820 | None:intergenic | 60.0% |
| ! | GTGCGGGAGCTTTGTGCACC+GGG | - | chr5.2:47496800-47496819 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 47491993 | 47497443 | 47491993 | ID=MS.gene65650 |
| chr5.2 | mRNA | 47491993 | 47497443 | 47491993 | ID=MS.gene65650.t1;Parent=MS.gene65650 |
| chr5.2 | exon | 47491993 | 47492068 | 47491993 | ID=MS.gene65650.t1.exon1;Parent=MS.gene65650.t1 |
| chr5.2 | CDS | 47491993 | 47492068 | 47491993 | ID=cds.MS.gene65650.t1;Parent=MS.gene65650.t1 |
| chr5.2 | exon | 47492160 | 47492230 | 47492160 | ID=MS.gene65650.t1.exon2;Parent=MS.gene65650.t1 |
| chr5.2 | CDS | 47492160 | 47492230 | 47492160 | ID=cds.MS.gene65650.t1;Parent=MS.gene65650.t1 |
| chr5.2 | exon | 47492661 | 47492785 | 47492661 | ID=MS.gene65650.t1.exon3;Parent=MS.gene65650.t1 |
| chr5.2 | CDS | 47492661 | 47492785 | 47492661 | ID=cds.MS.gene65650.t1;Parent=MS.gene65650.t1 |
| chr5.2 | exon | 47496408 | 47496468 | 47496408 | ID=MS.gene65650.t1.exon4;Parent=MS.gene65650.t1 |
| chr5.2 | CDS | 47496408 | 47496468 | 47496408 | ID=cds.MS.gene65650.t1;Parent=MS.gene65650.t1 |
| chr5.2 | exon | 47497387 | 47497443 | 47497387 | ID=MS.gene65650.t1.exon5;Parent=MS.gene65650.t1 |
| chr5.2 | CDS | 47497387 | 47497443 | 47497387 | ID=cds.MS.gene65650.t1;Parent=MS.gene65650.t1 |
| Gene Sequence |
| Protein sequence |
