Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043002.t1 | XP_003620604.1 | 98.1 | 722 | 14 | 0 | 1 | 722 | 1 | 722 | 0.00E+00 | 1382.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043002.t1 | Q9ZPI6 | 73.1 | 713 | 190 | 1 | 4 | 714 | 5 | 717 | 6.9e-306 | 1050.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043002.t1 | G7KPD3 | 98.1 | 722 | 14 | 0 | 1 | 722 | 1 | 722 | 0.0e+00 | 1382.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene043002 | MS.gene68895 | PPI |
| MS.gene043002 | MS.gene019120 | PPI |
| MS.gene22255 | MS.gene043002 | PPI |
| MS.gene043002 | MS.gene52387 | PPI |
| MS.gene004536 | MS.gene043002 | PPI |
| MS.gene46997 | MS.gene043002 | PPI |
| MS.gene043002 | MS.gene00278 | PPI |
| MS.gene043002 | MS.gene92059 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043002.t1 | MTR_6g087670 | 98.061 | 722 | 14 | 0 | 1 | 722 | 1 | 722 | 0.0 | 1441 |
| MS.gene043002.t1 | MTR_4g120130 | 57.752 | 703 | 295 | 1 | 10 | 710 | 12 | 714 | 0.0 | 854 |
| MS.gene043002.t1 | MTR_2g436300 | 56.882 | 712 | 305 | 1 | 1 | 710 | 1 | 712 | 0.0 | 833 |
| MS.gene043002.t1 | MTR_0837s0020 | 33.733 | 667 | 389 | 14 | 14 | 673 | 159 | 779 | 8.39e-90 | 302 |
| MS.gene043002.t1 | MTR_8g061230 | 32.509 | 283 | 184 | 3 | 305 | 582 | 3 | 283 | 7.13e-36 | 137 |
| MS.gene043002.t1 | MTR_8g058775 | 32.509 | 283 | 184 | 3 | 305 | 582 | 3 | 283 | 7.13e-36 | 137 |
| MS.gene043002.t1 | MTR_4g122220 | 34.694 | 196 | 122 | 4 | 14 | 208 | 15 | 205 | 1.45e-27 | 112 |
| MS.gene043002.t1 | MTR_4g100350 | 32.512 | 203 | 132 | 5 | 4 | 203 | 42 | 242 | 4.19e-23 | 100 |
| MS.gene043002.t1 | MTR_3g085700 | 30.556 | 144 | 89 | 2 | 48 | 183 | 53 | 193 | 2.40e-17 | 83.2 |
| MS.gene043002.t1 | MTR_2027s0010 | 32.778 | 180 | 106 | 4 | 26 | 201 | 22 | 190 | 5.75e-16 | 78.6 |
| MS.gene043002.t1 | MTR_8g064990 | 31.343 | 201 | 135 | 3 | 13 | 211 | 76 | 275 | 9.85e-14 | 73.6 |
| MS.gene043002.t1 | MTR_8g064990 | 31.000 | 200 | 135 | 3 | 14 | 211 | 3 | 201 | 4.16e-13 | 70.5 |
| MS.gene043002.t1 | MTR_2g039260 | 43.023 | 86 | 47 | 1 | 266 | 351 | 15 | 98 | 2.92e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043002.t1 | AT4G29010 | 73.072 | 713 | 190 | 1 | 4 | 714 | 5 | 717 | 0.0 | 1064 |
| MS.gene043002.t1 | AT3G06860 | 57.947 | 711 | 294 | 3 | 5 | 711 | 8 | 717 | 0.0 | 830 |
| MS.gene043002.t1 | AT3G15290 | 29.371 | 286 | 199 | 3 | 305 | 587 | 3 | 288 | 1.59e-34 | 134 |
| MS.gene043002.t1 | AT3G15290 | 30.568 | 229 | 156 | 3 | 362 | 587 | 1 | 229 | 5.36e-27 | 110 |
| MS.gene043002.t1 | AT4G16210 | 34.043 | 188 | 118 | 4 | 14 | 200 | 18 | 200 | 6.10e-25 | 105 |
| MS.gene043002.t1 | AT4G16800 | 33.990 | 203 | 129 | 3 | 4 | 203 | 43 | 243 | 7.95e-24 | 103 |
| MS.gene043002.t1 | AT5G43280 | 27.219 | 169 | 113 | 1 | 25 | 183 | 31 | 199 | 9.68e-18 | 83.2 |
| MS.gene043002.t1 | AT5G43280 | 27.219 | 169 | 113 | 1 | 25 | 183 | 31 | 199 | 3.01e-17 | 83.2 |
| MS.gene043002.t1 | AT1G60550 | 32.178 | 202 | 134 | 3 | 12 | 211 | 84 | 284 | 1.80e-16 | 82.0 |
Find 155 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAGATTGATAAGCAATTT+TGG | 0.183112 | 6.4:-60601248 | MS.gene043002:CDS |
| GGCAGGCCCAATTGAGCTTT+TGG | 0.190780 | 6.4:+60603728 | None:intergenic |
| TTATAAACCATCAAGGTATT+TGG | 0.219867 | 6.4:-60599429 | MS.gene043002:CDS |
| CTCACTGCTTAAAGGTGTTC+TGG | 0.264350 | 6.4:-60602203 | MS.gene043002:CDS |
| TTCTATGACTTGCAGGCTTC+AGG | 0.267461 | 6.4:-60600658 | MS.gene043002:intron |
| ATTGCTACCGCACTTATTCT+AGG | 0.280998 | 6.4:-60602674 | MS.gene043002:CDS |
| GTGAGAAAAGCAGCTGTTAT+TGG | 0.288237 | 6.4:-60602719 | MS.gene043002:CDS |
| TGCTCATATAATGCCTCTTT+TGG | 0.289248 | 6.4:-60601456 | MS.gene043002:CDS |
| CTTCAGGACTTGTCCGGATA+TGG | 0.293579 | 6.4:-60600642 | MS.gene043002:CDS |
| CTTTCCTCCAAATACCTTGA+TGG | 0.297901 | 6.4:+60599422 | None:intergenic |
| GGCGCTCTCTCACTGCTTAA+AGG | 0.302761 | 6.4:-60602211 | MS.gene043002:CDS |
| TGCTGCTCCAAAAGCTCAAT+TGG | 0.321338 | 6.4:-60603735 | MS.gene043002:CDS |
| TGCCCTTCTTCTGATGTGAT+TGG | 0.321452 | 6.4:+60603371 | None:intergenic |
| AGTACTGATAGGTCAGGTTT+TGG | 0.322359 | 6.4:+60600356 | None:intergenic |
| ATTCCTGGTGTAACTGATAT+TGG | 0.322928 | 6.4:-60602758 | MS.gene043002:CDS |
| AATTCTGAATATCTTCAAAA+AGG | 0.323893 | 6.4:-60602623 | MS.gene043002:CDS |
| GAATTTGCCGGTTCATTTGC+TGG | 0.325483 | 6.4:-60600597 | MS.gene043002:CDS |
| TCTTGGTCGGTGATAGAAAT+AGG | 0.325992 | 6.4:+60599908 | None:intergenic |
| CCCTCGACTGCTGCAACAAC+AGG | 0.326299 | 6.4:+60604327 | None:intergenic |
| ACTATTGACCTTAACATTAT+CGG | 0.332182 | 6.4:-60601684 | MS.gene043002:CDS |
| GCTGACACTTGGTATTATTC+CGG | 0.335870 | 6.4:-60603702 | MS.gene043002:CDS |
| AAATGGGCACCTTGTGCATA+TGG | 0.355530 | 6.4:+60601305 | None:intergenic |
| AACTTCAAAATCAACCTTAA+CGG | 0.370451 | 6.4:+60605482 | None:intergenic |
| CTGACACTTGGTATTATTCC+GGG | 0.372997 | 6.4:-60603701 | MS.gene043002:CDS |
| TGTTATTGGAGGAGGTCTAA+TGG | 0.378345 | 6.4:-60602705 | MS.gene043002:CDS |
| AGCTCTCAAGATCGTGTTAT+CGG | 0.385452 | 6.4:-60601651 | MS.gene043002:CDS |
| GAATGAGCTTCCCAAGTTAT+CGG | 0.391451 | 6.4:-60599781 | MS.gene043002:intron |
| CTTGGTATTATTCCGGGATT+CGG | 0.395378 | 6.4:-60603695 | MS.gene043002:CDS |
| GGAGGAGGTCTAATGGGTTC+TGG | 0.395880 | 6.4:-60602698 | MS.gene043002:CDS |
| GGCACAAGTTATTCTTGATC+TGG | 0.398012 | 6.4:-60601408 | MS.gene043002:CDS |
| AGCGTCTTCCAAGGCTTGTT+GGG | 0.402593 | 6.4:-60603553 | MS.gene043002:CDS |
| CTTGACATTGCATCTGTCCT+TGG | 0.405307 | 6.4:-60599803 | MS.gene043002:CDS |
| TTTGTTTGATTAGTTATTAG+AGG | 0.407164 | 6.4:-60605288 | MS.gene043002:intron |
| ACTTGGAGGTGGATTAGAAT+TGG | 0.411008 | 6.4:-60604298 | MS.gene043002:CDS |
| AGGGTATTACATTTACGAAA+AGG | 0.414416 | 6.4:-60600387 | MS.gene043002:CDS |
| GTTATTGGAGGAGGTCTAAT+GGG | 0.418042 | 6.4:-60602704 | MS.gene043002:CDS |
| AGTCTTCTTGACATGTTCTC+TGG | 0.426154 | 6.4:+60603190 | None:intergenic |
| CAGCGTCTTCCAAGGCTTGT+TGG | 0.426158 | 6.4:-60603554 | MS.gene043002:CDS |
| CGGAGGTACTAAAGGTATCT+AGG | 0.426603 | 6.4:-60603313 | MS.gene043002:CDS |
| TAATCCACCTGTTAATGCTT+TGG | 0.428841 | 6.4:-60605427 | MS.gene043002:CDS |
| GGAATAGCCAAAGCATTAAC+AGG | 0.435091 | 6.4:+60605420 | None:intergenic |
| TCCTGATGTATCTGTGGAGC+TGG | 0.438287 | 6.4:-60604491 | MS.gene043002:CDS |
| AGAGAGGCCTACCGATAACT+TGG | 0.439225 | 6.4:+60599770 | None:intergenic |
| GTCAAACCAACTTACCGGTT+TGG | 0.444260 | 6.4:+60604844 | None:intergenic |
| TTGATTAAAAGCGGGCGAAA+CGG | 0.453372 | 6.4:-60600543 | MS.gene043002:intron |
| GTCGAGGGGCTTGCACTTGG+AGG | 0.454284 | 6.4:-60604312 | MS.gene043002:CDS |
| GCAGTCGAGGGGCTTGCACT+TGG | 0.454532 | 6.4:-60604315 | MS.gene043002:CDS |
| CATAGACGCGCCTTTGATGT+TGG | 0.455260 | 6.4:+60599270 | None:intergenic |
| CTTCATATCACAGACAAACT+TGG | 0.460429 | 6.4:-60603242 | MS.gene043002:CDS |
| TGCTACGGCAACTCCATATC+CGG | 0.460687 | 6.4:+60600629 | None:intergenic |
| GTATCATCTCCACGATCTCT+TGG | 0.461518 | 6.4:+60599891 | None:intergenic |
| GAGGGGCTTGCACTTGGAGG+TGG | 0.463458 | 6.4:-60604309 | MS.gene043002:CDS |
| CTGGTTGTCAACTCAATTGA+AGG | 0.464208 | 6.4:-60604472 | MS.gene043002:intron |
| CGACAAGCCTCATTCACTAC+TGG | 0.467393 | 6.4:+60599863 | None:intergenic |
| GGGTATTACATTTACGAAAA+GGG | 0.468928 | 6.4:-60600386 | MS.gene043002:CDS |
| TTAGACGTCCCAACAAGCCT+TGG | 0.469666 | 6.4:+60603545 | None:intergenic |
| TGTATGATAGCTAATGTTCG+TGG | 0.478540 | 6.4:-60602274 | MS.gene043002:intron |
| GCCTGTTGTTGCAGCAGTCG+AGG | 0.482052 | 6.4:-60604328 | MS.gene043002:CDS |
| CAACCATTGGTAGTACTGAT+AGG | 0.483936 | 6.4:+60600345 | None:intergenic |
| AAAGATCAAGTAGTGGAGTT+GGG | 0.486726 | 6.4:+60600565 | None:intergenic |
| TGTGCGGCCAGCAAATGAAC+CGG | 0.486833 | 6.4:+60600590 | None:intergenic |
| TGCAGGCTTCAGGACTTGTC+CGG | 0.487414 | 6.4:-60600648 | MS.gene043002:intron |
| AAAAGATCAAGTAGTGGAGT+TGG | 0.488389 | 6.4:+60600564 | None:intergenic |
| CCTGTTGTTGCAGCAGTCGA+GGG | 0.491436 | 6.4:-60604327 | MS.gene043002:CDS |
| TAAACCATCAAGGTATTTGG+AGG | 0.494021 | 6.4:-60599426 | MS.gene043002:CDS |
| TTGTTTGATTAGTTATTAGA+GGG | 0.497016 | 6.4:-60605287 | MS.gene043002:intron |
| GTGCAGTTACCGACCACAAC+AGG | 0.497483 | 6.4:+60601356 | None:intergenic |
| AATAGAAGCACCTTTCCATT+CGG | 0.500106 | 6.4:+60600293 | None:intergenic |
| TACTAAAGGTATCTAGGCAA+TGG | 0.500628 | 6.4:-60603307 | MS.gene043002:CDS |
| AAACCAATCACATCAGAAGA+AGG | 0.501155 | 6.4:-60603374 | MS.gene043002:CDS |
| AAGCAGTGAGAGAGCGCCTT+CGG | 0.504199 | 6.4:+60602216 | None:intergenic |
| GACATGAATTAAACCTTTCG+CGG | 0.504622 | 6.4:+60602890 | None:intergenic |
| ATCTCCTGCGGAGGTACTAA+AGG | 0.508174 | 6.4:-60603321 | MS.gene043002:CDS |
| ACTCTTTCCAGTAGTGAATG+AGG | 0.510599 | 6.4:-60599870 | MS.gene043002:CDS |
| GTTGTGGTCGGTAACTGCAC+TGG | 0.512561 | 6.4:-60601353 | MS.gene043002:CDS |
| CTTAGCAATGTTATGCCGAA+TGG | 0.515959 | 6.4:-60600308 | MS.gene043002:CDS |
| ATGCAGAAAGTTCACCAAAC+CGG | 0.516953 | 6.4:-60604858 | MS.gene043002:intron |
| GCTGCTCCAAAAGCTCAATT+GGG | 0.516998 | 6.4:-60603734 | MS.gene043002:CDS |
| TTGCTGAAAAGCGCAAACCT+TGG | 0.518297 | 6.4:-60603274 | MS.gene043002:CDS |
| AAAAGAGGCATTATATGAGC+AGG | 0.521618 | 6.4:+60601458 | None:intergenic |
| ATTGGTAGTACTGATAGGTC+AGG | 0.525530 | 6.4:+60600350 | None:intergenic |
| AATGGGCACCTTGTGCATAT+GGG | 0.534144 | 6.4:+60601306 | None:intergenic |
| CTTCTAGACTCCTCAACCAT+TGG | 0.535028 | 6.4:+60600332 | None:intergenic |
| TACCAAGTGTCAGCTCTGGC+AGG | 0.535403 | 6.4:+60603711 | None:intergenic |
| GTTCGTACAATCTCCAAAAG+AGG | 0.541025 | 6.4:+60601443 | None:intergenic |
| CCCTTGAATTCAGGTAAAGG+TGG | 0.542529 | 6.4:-60604912 | MS.gene043002:intron |
| TAAAGCAGTTGAAATGATGC+TGG | 0.544574 | 6.4:-60603525 | MS.gene043002:intron |
| GGCCTGCCAGAGCTGACACT+TGG | 0.544738 | 6.4:-60603713 | MS.gene043002:CDS |
| ACTAAAGGTATCTAGGCAAT+GGG | 0.545443 | 6.4:-60603306 | MS.gene043002:CDS |
| GATGTTGGATTAGATGAAGC+CGG | 0.545989 | 6.4:+60599285 | None:intergenic |
| GCAGTCGGAAAAGAATTTGC+CGG | 0.548163 | 6.4:-60600609 | MS.gene043002:CDS |
| ATTCTTGATCTGGTGACAGT+TGG | 0.552800 | 6.4:-60601398 | MS.gene043002:CDS |
| ATCAGTACTACCAATGGTTG+AGG | 0.553043 | 6.4:-60600342 | MS.gene043002:CDS |
| ATAATACCAAGTGTCAGCTC+TGG | 0.553162 | 6.4:+60603707 | None:intergenic |
| ACCTTGTGCATATGGGAAGA+AGG | 0.554770 | 6.4:+60601313 | None:intergenic |
| GTATTGCCTGCAGAGTGCAC+CGG | 0.555746 | 6.4:-60599304 | MS.gene043002:intron |
| TGTTGATTACCTCCGAATCC+CGG | 0.558726 | 6.4:+60603683 | None:intergenic |
| AAAGCAGCTGTTATTGGAGG+AGG | 0.559263 | 6.4:-60602713 | MS.gene043002:CDS |
| TATGGAGTTGCCGTAGCAGT+CGG | 0.559428 | 6.4:-60600624 | MS.gene043002:CDS |
| TGCATAGATGTGATTGAGCA+TGG | 0.560359 | 6.4:-60603140 | MS.gene043002:CDS |
| ACCAGCTCCACAGATACATC+AGG | 0.561977 | 6.4:+60604490 | None:intergenic |
| CAACATTCGTGTTATACTCA+AGG | 0.563709 | 6.4:-60602651 | MS.gene043002:CDS |
| TTGGAGCAGCAACACGTGCA+TGG | 0.570017 | 6.4:+60603747 | None:intergenic |
| TTCATCTAATCCAACATCAA+AGG | 0.572113 | 6.4:-60599280 | MS.gene043002:CDS |
| GCTTGTTGCTGAGGCAAATG+TGG | 0.575688 | 6.4:+60603164 | None:intergenic |
| GAACACATCCACGCCCAAGT+TGG | 0.580041 | 6.4:+60601277 | None:intergenic |
| CAATGTTATGCCGAATGGAA+AGG | 0.581205 | 6.4:-60600303 | MS.gene043002:intron |
| TTGATGCCAAAATGCAGTGT+GGG | 0.581421 | 6.4:+60601715 | None:intergenic |
| CTGTTGTTGCAGCAGTCGAG+GGG | 0.585454 | 6.4:-60604326 | MS.gene043002:CDS |
| AACCAATCACATCAGAAGAA+GGG | 0.588441 | 6.4:-60603373 | MS.gene043002:CDS |
| AGAAAAGCAGCTGTTATTGG+AGG | 0.588924 | 6.4:-60602716 | MS.gene043002:CDS |
| AGATGTGGACATGGTCATTG+AGG | 0.589341 | 6.4:-60602164 | MS.gene043002:intron |
| AAGGTACACAGCGTCTTCCA+AGG | 0.590966 | 6.4:-60603562 | MS.gene043002:CDS |
| GGTATTATTCCGGGATTCGG+AGG | 0.592421 | 6.4:-60603692 | MS.gene043002:intron |
| TTACGCGGAATTTAAAGATG+TGG | 0.592993 | 6.4:-60602179 | MS.gene043002:CDS |
| ATTGAGCATGGGATACTTCA+CGG | 0.593300 | 6.4:-60603128 | MS.gene043002:CDS |
| TGCTCAGCGCACAATATCAA+AGG | 0.595809 | 6.4:-60602862 | MS.gene043002:intron |
| CATCTCCACGATCTCTTGGT+CGG | 0.598867 | 6.4:+60599895 | None:intergenic |
| AGGTGGATTAGAATTGGCCA+TGG | 0.601275 | 6.4:-60604292 | MS.gene043002:intron |
| GTCTTGTCTGAAACCGCGAA+AGG | 0.602016 | 6.4:-60602903 | MS.gene043002:CDS |
| TCTCAATACCTCACGTGCGT+TGG | 0.602916 | 6.4:+60603217 | None:intergenic |
| AGAGACGAGGATTACTGGAA+AGG | 0.605013 | 6.4:+60601212 | None:intergenic |
| TCTATGCAAGCTTGTTGCTG+AGG | 0.606132 | 6.4:+60603155 | None:intergenic |
| ATATGAAGTGAACGAATCCA+AGG | 0.608262 | 6.4:+60603257 | None:intergenic |
| ACAAATTTGAAGAAGCAGCA+AGG | 0.617969 | 6.4:-60605257 | MS.gene043002:CDS |
| TGATGCTATTGTATCTCCTG+CGG | 0.619725 | 6.4:-60603333 | MS.gene043002:CDS |
| ACTGGAAAGGACCCATAGGA+AGG | 0.620201 | 6.4:+60601225 | None:intergenic |
| CCTTGAATTCAGGTAAAGGT+GGG | 0.621550 | 6.4:-60604911 | MS.gene043002:intron |
| GAGAGGCCTACCGATAACTT+GGG | 0.622777 | 6.4:+60599771 | None:intergenic |
| TGACCTATCAGTACTACCAA+TGG | 0.625045 | 6.4:-60600348 | MS.gene043002:CDS |
| TTAATCAAAAGATCAAGTAG+TGG | 0.632647 | 6.4:+60600558 | None:intergenic |
| ATACTTCACGGTGGTTACAG+TGG | 0.635869 | 6.4:-60603116 | MS.gene043002:CDS |
| GTAGTGGAGTTGGGAATGTG+CGG | 0.636968 | 6.4:+60600574 | None:intergenic |
| GCTTGTTCCTGATGTATCTG+TGG | 0.639154 | 6.4:-60604497 | MS.gene043002:CDS |
| AACTTGGGAAGCTCATTCCA+AGG | 0.639897 | 6.4:+60599786 | None:intergenic |
| GATTACTGGAAAGGACCCAT+AGG | 0.641009 | 6.4:+60601221 | None:intergenic |
| ACTTGGTTCCAACGCACGTG+AGG | 0.641199 | 6.4:-60603225 | MS.gene043002:CDS |
| TGCTATTGTATCTCCTGCGG+AGG | 0.643295 | 6.4:-60603330 | MS.gene043002:CDS |
| TGTACGAACGAATAAAACTT+CGG | 0.644457 | 6.4:-60601429 | MS.gene043002:CDS |
| CAAGGACAGATGCAATGTCA+AGG | 0.645468 | 6.4:+60599804 | None:intergenic |
| TATCACCGACCAAGAGATCG+TGG | 0.651409 | 6.4:-60599900 | MS.gene043002:CDS |
| GCATAGATGTGATTGAGCAT+GGG | 0.652394 | 6.4:-60603139 | MS.gene043002:CDS |
| TTGACTCAACAAAAGGCCGA+AGG | 0.656227 | 6.4:-60602232 | MS.gene043002:CDS |
| ACCTTCTTCCCATATGCACA+AGG | 0.662279 | 6.4:-60601314 | MS.gene043002:CDS |
| TAAAGGTGTTCTGGATTACG+CGG | 0.663710 | 6.4:-60602194 | MS.gene043002:CDS |
| GATACCTTTAGTACCTCCGC+AGG | 0.667956 | 6.4:+60603317 | None:intergenic |
| GGAATTTAAAGATGTGGACA+TGG | 0.674230 | 6.4:-60602173 | MS.gene043002:CDS |
| AGTCCAATATCAGTTACACC+AGG | 0.684342 | 6.4:+60602755 | None:intergenic |
| TTTGATGCCAAAATGCAGTG+TGG | 0.685123 | 6.4:+60601714 | None:intergenic |
| ATAGCCAAAGCATTAACAGG+TGG | 0.687857 | 6.4:+60605423 | None:intergenic |
| TGATGCCAAAATGCAGTGTG+GGG | 0.690271 | 6.4:+60601716 | None:intergenic |
| AATGTTGCCTAGAATAAGTG+CGG | 0.703705 | 6.4:+60602667 | None:intergenic |
| GATGCCAAAATGCAGTGTGG+GGG | 0.724011 | 6.4:+60601717 | None:intergenic |
| AATTTGAAGAAGCAGCAAGG+AGG | 0.747901 | 6.4:-60605254 | MS.gene043002:CDS |
| GAGCATGGGATACTTCACGG+TGG | 0.811628 | 6.4:-60603125 | MS.gene043002:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTTAGTTGAATTA+TGG | - | chr6.4:60600189-60600208 | MS.gene043002:intron | 10.0% |
| !! | ATAAAAATACATTAACAATT+AGG | + | chr6.4:60605182-60605201 | None:intergenic | 10.0% |
| !! | TAAAAATACATTAACAATTA+GGG | + | chr6.4:60605181-60605200 | None:intergenic | 10.0% |
| !!! | ATTTTTTGTTTTTATGAAAA+TGG | - | chr6.4:60599732-60599751 | MS.gene043002:intron | 10.0% |
| !!! | TTTAAAAGATAATCATTTTT+AGG | - | chr6.4:60603678-60603697 | MS.gene043002:intron | 10.0% |
| !!! | TTTTTTGTTTTTATGAAAAT+GGG | - | chr6.4:60599733-60599752 | MS.gene043002:intron | 10.0% |
| !! | AAAAATACATTAACAATTAG+GGG | + | chr6.4:60605180-60605199 | None:intergenic | 15.0% |
| !! | AAAGATTTATATCAATCTAA+CGG | + | chr6.4:60600952-60600971 | None:intergenic | 15.0% |
| !!! | ACATAAAACAAATTGATAAT+TGG | - | chr6.4:60602222-60602241 | MS.gene043002:CDS | 15.0% |
| !!! | ATAAACACTCAATTTAATTT+TGG | - | chr6.4:60603635-60603654 | MS.gene043002:intron | 15.0% |
| !!! | ATAGCTGTTAATAAAAATTT+TGG | - | chr6.4:60599417-60599436 | MS.gene043002:CDS | 15.0% |
| !!! | TAAACACTCAATTTAATTTT+GGG | - | chr6.4:60603636-60603655 | MS.gene043002:intron | 15.0% |
| !!! | TTTTAAAATCCCTAAATTAT+CGG | - | chr6.4:60603877-60603896 | MS.gene043002:intron | 15.0% |
| !! | AAAGGAATAAAAACAATAGA+AGG | - | chr6.4:60602153-60602172 | MS.gene043002:intron | 20.0% |
| !! | AATTCTGAATATCTTCAAAA+AGG | - | chr6.4:60602135-60602154 | MS.gene043002:intron | 20.0% |
| !! | ATAAAAAATTAACGATTCCA+TGG | - | chr6.4:60604016-60604035 | MS.gene043002:intron | 20.0% |
| !! | CTAATAGTATCAAAAAAGAA+AGG | + | chr6.4:60602928-60602947 | None:intergenic | 20.0% |
| !! | TAGCTTATGAAAATAGATTA+TGG | - | chr6.4:60600052-60600071 | MS.gene043002:intron | 20.0% |
| !! | TCATACTAAAAGAAACATAA+TGG | + | chr6.4:60600346-60600365 | None:intergenic | 20.0% |
| !! | TTAAATGTAATCACATGTAT+CGG | + | chr6.4:60602815-60602834 | None:intergenic | 20.0% |
| !! | TTCAAAAAGTTATTTACAAC+AGG | + | chr6.4:60603236-60603255 | None:intergenic | 20.0% |
| !!! | AACTTTTTGAAGATATTCTA+TGG | - | chr6.4:60603245-60603264 | MS.gene043002:CDS | 20.0% |
| !!! | ACTTTTTGAAGATATTCTAT+GGG | - | chr6.4:60603246-60603265 | MS.gene043002:CDS | 20.0% |
| !!! | ATCTAAAATCTGCTTAAAAT+AGG | - | chr6.4:60603738-60603757 | MS.gene043002:CDS | 20.0% |
| !!! | ATTAAGTTGTTTATCTAAAC+AGG | - | chr6.4:60604729-60604748 | MS.gene043002:intron | 20.0% |
| !!! | CCAAAATTTGTTGATTAATA+AGG | - | chr6.4:60601177-60601196 | MS.gene043002:intron | 20.0% |
| !!! | CCTTATTAATCAACAAATTT+TGG | + | chr6.4:60601180-60601199 | None:intergenic | 20.0% |
| !!! | TATTTTGTAGTGTTACATAT+AGG | - | chr6.4:60604484-60604503 | MS.gene043002:CDS | 20.0% |
| !!! | TTAAGTTGTTTATCTAAACA+GGG | - | chr6.4:60604730-60604749 | MS.gene043002:intron | 20.0% |
| !!! | TTGTTTGATTAGTTATTAGA+GGG | - | chr6.4:60599471-60599490 | MS.gene043002:CDS | 20.0% |
| !!! | TTTGTTTGATTAGTTATTAG+AGG | - | chr6.4:60599470-60599489 | MS.gene043002:CDS | 20.0% |
| ! | AAAAAATGGGCACAATTATA+TGG | - | chr6.4:60605300-60605319 | MS.gene043002:intron | 25.0% |
| ! | AACAAAAAATCATTGACCTA+TGG | + | chr6.4:60599722-60599741 | None:intergenic | 25.0% |
| ! | AACATTAGCTATCATACAAA+AGG | + | chr6.4:60602482-60602501 | None:intergenic | 25.0% |
| ! | AACTTCAAAATCAACCTTAA+CGG | + | chr6.4:60599279-60599298 | None:intergenic | 25.0% |
| ! | AAGTTAAACAAACAGTACTT+CGG | + | chr6.4:60602628-60602647 | None:intergenic | 25.0% |
| ! | ACTATTGACCTTAACATTAT+CGG | - | chr6.4:60603074-60603093 | MS.gene043002:intron | 25.0% |
| ! | ACTTATTTGAGCTTATATAC+TGG | - | chr6.4:60599935-60599954 | MS.gene043002:intron | 25.0% |
| ! | AGTGTTTATGTTGAAATAGT+GGG | + | chr6.4:60603624-60603643 | None:intergenic | 25.0% |
| ! | ATAATTTATAGAGTTCAACG+AGG | - | chr6.4:60605045-60605064 | MS.gene043002:intron | 25.0% |
| ! | ATATAGCAGCCTAAAAAAAT+GGG | - | chr6.4:60605287-60605306 | MS.gene043002:intron | 25.0% |
| ! | ATCCTATCAGGAAAAAATAA+TGG | - | chr6.4:60604345-60604364 | MS.gene043002:intron | 25.0% |
| ! | ATCCTCAATCATTAAAAGAA+GGG | + | chr6.4:60605015-60605034 | None:intergenic | 25.0% |
| ! | ATTCACTATGCTAAGATAAA+GGG | - | chr6.4:60603984-60604003 | MS.gene043002:intron | 25.0% |
| ! | CAAAAAAGTGACTTTCATTA+TGG | - | chr6.4:60603830-60603849 | MS.gene043002:intron | 25.0% |
| ! | CAAACAAACAAACAAAAAAG+TGG | + | chr6.4:60599391-60599410 | None:intergenic | 25.0% |
| ! | CTTATGATCAAATTAATTGC+AGG | - | chr6.4:60601809-60601828 | MS.gene043002:intron | 25.0% |
| ! | GCATAAAGTCATACATATTA+AGG | + | chr6.4:60602430-60602449 | None:intergenic | 25.0% |
| ! | GTGAGTAAATTAGGAATAAT+AGG | - | chr6.4:60602197-60602216 | MS.gene043002:CDS | 25.0% |
| ! | TAATTTATAGAGTTCAACGA+GGG | - | chr6.4:60605046-60605065 | MS.gene043002:intron | 25.0% |
| ! | TACTAAACCATATGAAACTT+TGG | + | chr6.4:60601939-60601958 | None:intergenic | 25.0% |
| ! | TATATAGCAGCCTAAAAAAA+TGG | - | chr6.4:60605286-60605305 | MS.gene043002:intron | 25.0% |
| ! | TATTATCAATCACAAATCGT+CGG | - | chr6.4:60600586-60600605 | MS.gene043002:CDS | 25.0% |
| ! | TCCTATCAGGAAAAAATAAT+GGG | - | chr6.4:60604346-60604365 | MS.gene043002:intron | 25.0% |
| ! | TTAAACAAGTCAATCTAAAC+AGG | + | chr6.4:60604511-60604530 | None:intergenic | 25.0% |
| ! | TTAATCAAAAGATCAAGTAG+TGG | + | chr6.4:60604203-60604222 | None:intergenic | 25.0% |
| ! | TTAGCTTATATCAAAACAGT+TGG | - | chr6.4:60604665-60604684 | MS.gene043002:intron | 25.0% |
| ! | TTTCATATGGTTTAGTACTT+CGG | - | chr6.4:60601942-60601961 | MS.gene043002:intron | 25.0% |
| ! | TTTGGATAAGCAACTTAATT+AGG | + | chr6.4:60600152-60600171 | None:intergenic | 25.0% |
| !! | AAAAAAGTTGACTCAACAAA+AGG | - | chr6.4:60602519-60602538 | MS.gene043002:intron | 25.0% |
| !! | GTAACTTTTATAAACCATCA+AGG | - | chr6.4:60605322-60605341 | MS.gene043002:intron | 25.0% |
| !! | TTATAAACCATCAAGGTATT+TGG | - | chr6.4:60605329-60605348 | MS.gene043002:intron | 25.0% |
| !! | TTGTTTCCTTTCTTTTTGAA+GGG | - | chr6.4:60603164-60603183 | MS.gene043002:CDS | 25.0% |
| !!! | AAGCATAATGTTTTGTTTGA+AGG | + | chr6.4:60604258-60604277 | None:intergenic | 25.0% |
| !!! | AGCATAATGTTTTGTTTGAA+GGG | + | chr6.4:60604257-60604276 | None:intergenic | 25.0% |
| !!! | ATAATTGTGCCCATTTTTTT+AGG | + | chr6.4:60605299-60605318 | None:intergenic | 25.0% |
| !!! | CTTGATCTTTTGATTAAAAG+CGG | - | chr6.4:60604206-60604225 | MS.gene043002:intron | 25.0% |
| !!! | GGTTTGTTCAGTTTATTTTA+TGG | - | chr6.4:60599754-60599773 | MS.gene043002:intron | 25.0% |
| !!! | GTTCAGTTTATTTTATGGAA+TGG | - | chr6.4:60599759-60599778 | MS.gene043002:intron | 25.0% |
| !!! | TTATTTTATGGAATGGATCA+TGG | - | chr6.4:60599766-60599785 | MS.gene043002:intron | 25.0% |
| !!! | TTGATCTTTTGATTAAAAGC+GGG | - | chr6.4:60604207-60604226 | MS.gene043002:intron | 25.0% |
| !!! | TTTGACAGGTAATTTTGATT+TGG | - | chr6.4:60599547-60599566 | MS.gene043002:intron | 25.0% |
| !!! | TTTTTTCCCTTCAAAAAGAA+AGG | + | chr6.4:60603173-60603192 | None:intergenic | 25.0% |
| AATAAGTCAAACCAACTTAC+CGG | + | chr6.4:60599922-60599941 | None:intergenic | 30.0% | |
| ACATCAAAAGGAAACAATGT+TGG | + | chr6.4:60604792-60604811 | None:intergenic | 30.0% | |
| AGTGTCTTCATTATTGCATA+TGG | - | chr6.4:60600545-60600564 | MS.gene043002:CDS | 30.0% | |
| ATACATATTAAGGATGAGAC+TGG | + | chr6.4:60602420-60602439 | None:intergenic | 30.0% | |
| ATCCCTATACAATGAAAAAG+TGG | + | chr6.4:60600990-60601009 | None:intergenic | 30.0% | |
| CAATGAATTGCATTAGAAGA+AGG | + | chr6.4:60603920-60603939 | None:intergenic | 30.0% | |
| CATCCTCAATCATTAAAAGA+AGG | + | chr6.4:60605016-60605035 | None:intergenic | 30.0% | |
| CATTCACTATGCTAAGATAA+AGG | - | chr6.4:60603983-60604002 | MS.gene043002:intron | 30.0% | |
| CTCAAACAATTGCAAATGAA+TGG | + | chr6.4:60601270-60601289 | None:intergenic | 30.0% | |
| GAGTGTTTATGTTGAAATAG+TGG | + | chr6.4:60603625-60603644 | None:intergenic | 30.0% | |
| GATATGACCAAAGTTTCATA+TGG | - | chr6.4:60601929-60601948 | MS.gene043002:intron | 30.0% | |
| GGGTATTACATTTACGAAAA+GGG | - | chr6.4:60604372-60604391 | MS.gene043002:intron | 30.0% | |
| GTAAACAGATGTTTAAGTCT+CGG | - | chr6.4:60603956-60603975 | MS.gene043002:intron | 30.0% | |
| GTGTTTATGTTGAAATAGTG+GGG | + | chr6.4:60603623-60603642 | None:intergenic | 30.0% | |
| TAACTAATGCTTTCTGTCAT+TGG | - | chr6.4:60604311-60604330 | MS.gene043002:CDS | 30.0% | |
| TAAGACTATTTGAGAGCTTA+TGG | - | chr6.4:60599970-60599989 | MS.gene043002:intron | 30.0% | |
| TATCATTCAAGCACAATGTT+TGG | + | chr6.4:60600170-60600189 | None:intergenic | 30.0% | |
| TATTCAATGTACCTAGAAAG+TGG | - | chr6.4:60600782-60600801 | MS.gene043002:intron | 30.0% | |
| TCATGTGATGTGAGTAAATT+AGG | - | chr6.4:60602188-60602207 | MS.gene043002:CDS | 30.0% | |
| TCTTCATTATTGCATATGGA+GGG | - | chr6.4:60600549-60600568 | MS.gene043002:CDS | 30.0% | |
| TGTACGAACGAATAAAACTT+CGG | - | chr6.4:60603329-60603348 | MS.gene043002:CDS | 30.0% | |
| TTCATCTAATCCAACATCAA+AGG | - | chr6.4:60605478-60605497 | MS.gene043002:CDS | 30.0% | |
| ! | AGGGAAATAAGCTTCTAAAA+AGG | - | chr6.4:60605065-60605084 | MS.gene043002:intron | 30.0% |
| ! | AGGGTATTACATTTACGAAA+AGG | - | chr6.4:60604371-60604390 | MS.gene043002:intron | 30.0% |
| ! | CAGGAAAAAATAATGGGAAA+GGG | - | chr6.4:60604352-60604371 | MS.gene043002:intron | 30.0% |
| ! | CTCATTTGTTTGGTAATCTA+GGG | - | chr6.4:60601106-60601125 | MS.gene043002:intron | 30.0% |
| ! | CTTGTTTCCTTTCTTTTTGA+AGG | - | chr6.4:60603163-60603182 | MS.gene043002:CDS | 30.0% |
| ! | GACAGATTGATAAGCAATTT+TGG | - | chr6.4:60603510-60603529 | MS.gene043002:intron | 30.0% |
| ! | GCAGAACAATTCTTATTTAG+AGG | + | chr6.4:60600524-60600543 | None:intergenic | 30.0% |
| ! | GTTTTGCTTATAATAGTGAC+CGG | - | chr6.4:60600806-60600825 | MS.gene043002:intron | 30.0% |
| ! | GTTTTGCTTATAATAGTGAC+CGG | + | chr6.4:60600825-60600806 | None:intergenic | 30.0% |
| ! | TCAGGAAAAAATAATGGGAA+AGG | - | chr6.4:60604351-60604370 | MS.gene043002:intron | 30.0% |
| ! | TCTATTTTCATAAGCTATCG+TGG | + | chr6.4:60600049-60600068 | None:intergenic | 30.0% |
| ! | TCTTTTCACCGATAATGTTA+AGG | + | chr6.4:60603085-60603104 | None:intergenic | 30.0% |
| ! | TGTCTCATTGCAATCAATTT+TGG | - | chr6.4:60605213-60605232 | MS.gene043002:intron | 30.0% |
| ! | TTCCCTTCTTTTAATGATTG+AGG | - | chr6.4:60605010-60605029 | MS.gene043002:intron | 30.0% |
| ! | TTGTTTCCTTTTGATGTGAA+AGG | - | chr6.4:60604795-60604814 | MS.gene043002:intron | 30.0% |
| ! | TTTTCCTGATAGGATGATAT+AGG | + | chr6.4:60604340-60604359 | None:intergenic | 30.0% |
| ! | TTTTTGTCACTGAAAATGCA+TGG | - | chr6.4:60600494-60600513 | MS.gene043002:intron | 30.0% |
| !! | GAAGTACTGTTTGTTTAACT+TGG | - | chr6.4:60602627-60602646 | MS.gene043002:CDS | 30.0% |
| !!! | CACCACTTTTTCATTGTATA+GGG | - | chr6.4:60600985-60601004 | MS.gene043002:intron | 30.0% |
| !!! | GATTTTGAAGTTGGAAATGA+TGG | - | chr6.4:60599287-60599306 | MS.gene043002:CDS | 30.0% |
| !!! | GTTAAGGTTGATTTTGAAGT+TGG | - | chr6.4:60599278-60599297 | MS.gene043002:CDS | 30.0% |
| !!! | TCCCATTATTTTTTCCTGAT+AGG | + | chr6.4:60604350-60604369 | None:intergenic | 30.0% |
| !!! | TGCTGTTTTTTATCTTGACA+GGG | - | chr6.4:60600230-60600249 | MS.gene043002:intron | 30.0% |
| !!! | TTGCTGTTTTTTATCTTGAC+AGG | - | chr6.4:60600229-60600248 | MS.gene043002:intron | 30.0% |
| !!! | TTTTTTCTTTTCACCCTTTG+TGG | - | chr6.4:60601321-60601340 | MS.gene043002:CDS | 30.0% |
| AAAAAATCTCCTGTTGTGGT+CGG | - | chr6.4:60603393-60603412 | MS.gene043002:intron | 35.0% | |
| AAACCAATCACATCAGAAGA+AGG | - | chr6.4:60601384-60601403 | MS.gene043002:CDS | 35.0% | |
| AACACTGTCACAAGTACTTA+TGG | + | chr6.4:60604552-60604571 | None:intergenic | 35.0% | |
| AACCAATCACATCAGAAGAA+GGG | - | chr6.4:60601385-60601404 | MS.gene043002:CDS | 35.0% | |
| AATGTTGCCTAGAATAAGTG+CGG | + | chr6.4:60602094-60602113 | None:intergenic | 35.0% | |
| ACAAATTTGAAGAAGCAGCA+AGG | - | chr6.4:60599501-60599520 | MS.gene043002:CDS | 35.0% | |
| ACATGTCTATTGAACCACAA+AGG | + | chr6.4:60601338-60601357 | None:intergenic | 35.0% | |
| ACTCATATTATCACGAGTGT+TGG | - | chr6.4:60602846-60602865 | MS.gene043002:intron | 35.0% | |
| AGTAAGCTGAAAACAGCATA+TGG | + | chr6.4:60604608-60604627 | None:intergenic | 35.0% | |
| AGTTACACAAAACACGTAAC+AGG | + | chr6.4:60601791-60601810 | None:intergenic | 35.0% | |
| ATATGAAGTGAACGAATCCA+AGG | + | chr6.4:60601504-60601523 | None:intergenic | 35.0% | |
| ATGAGACTGGTGTACATTTA+AGG | + | chr6.4:60602407-60602426 | None:intergenic | 35.0% | |
| ATTCCTGGTGTAACTGATAT+TGG | - | chr6.4:60602000-60602019 | MS.gene043002:intron | 35.0% | |
| CAACATTCGTGTTATACTCA+AGG | - | chr6.4:60602107-60602126 | MS.gene043002:intron | 35.0% | |
| CAGTGACAAAAAACTAACCA+TGG | + | chr6.4:60600486-60600505 | None:intergenic | 35.0% | |
| CATCAAAAAATCTCCTGTTG+TGG | - | chr6.4:60603389-60603408 | MS.gene043002:intron | 35.0% | |
| CATGTCTATTGAACCACAAA+GGG | + | chr6.4:60601337-60601356 | None:intergenic | 35.0% | |
| CATTATAGTGCAGCAGAATT+TGG | + | chr6.4:60600862-60600881 | None:intergenic | 35.0% | |
| CATTTGCATGCTCATTTGTT+TGG | - | chr6.4:60601096-60601115 | MS.gene043002:intron | 35.0% | |
| CTTCATATCACAGACAAACT+TGG | - | chr6.4:60601516-60601535 | MS.gene043002:intron | 35.0% | |
| GAACATTGTTGTCTTACCAA+AGG | + | chr6.4:60605378-60605397 | None:intergenic | 35.0% | |
| GACATGAATTAAACCTTTCG+CGG | + | chr6.4:60601871-60601890 | None:intergenic | 35.0% | |
| GATGAAACACTGATCTTACT+TGG | + | chr6.4:60599362-60599381 | None:intergenic | 35.0% | |
| GGAATTTAAAGATGTGGACA+TGG | - | chr6.4:60602585-60602604 | MS.gene043002:intron | 35.0% | |
| GTCTTCATTATTGCATATGG+AGG | - | chr6.4:60600548-60600567 | MS.gene043002:CDS | 35.0% | |
| TAAAGCAGTTGAAATGATGC+TGG | - | chr6.4:60601233-60601252 | MS.gene043002:CDS | 35.0% | |
| TAACAATTAGGGGTGAGAAT+CGG | + | chr6.4:60605170-60605189 | None:intergenic | 35.0% | |
| TAAGCAAAACTCCACTTTCT+AGG | + | chr6.4:60600796-60600815 | None:intergenic | 35.0% | |
| TAAGTACTTGTGACAGTGTT+TGG | - | chr6.4:60604552-60604571 | MS.gene043002:intron | 35.0% | |
| TAATCCACCTGTTAATGCTT+TGG | - | chr6.4:60599331-60599350 | MS.gene043002:intron | 35.0% | |
| TACTTGCCTTTCACATCAAA+AGG | + | chr6.4:60604804-60604823 | None:intergenic | 35.0% | |
| TATTAACGTTCTCTCTTTGC+AGG | - | chr6.4:60602959-60602978 | MS.gene043002:intron | 35.0% | |
| TCATTAAAAGAAGGGAAGAG+AGG | + | chr6.4:60605007-60605026 | None:intergenic | 35.0% | |
| TGAAAAAGTGGTGCATTACA+AGG | + | chr6.4:60600978-60600997 | None:intergenic | 35.0% | |
| TGAGACTGGTGTACATTTAA+GGG | + | chr6.4:60602406-60602425 | None:intergenic | 35.0% | |
| TGTATGATAGCTAATGTTCG+TGG | - | chr6.4:60602484-60602503 | MS.gene043002:intron | 35.0% | |
| TGTCCATGTCTGTTTATGAA+TGG | - | chr6.4:60602889-60602908 | MS.gene043002:CDS | 35.0% | |
| TTACGCGGAATTTAAAGATG+TGG | - | chr6.4:60602579-60602598 | MS.gene043002:intron | 35.0% | |
| ! | AAAAGATCAAGTAGTGGAGT+TGG | + | chr6.4:60604197-60604216 | None:intergenic | 35.0% |
| ! | AAAGATCAAGTAGTGGAGTT+GGG | + | chr6.4:60604196-60604215 | None:intergenic | 35.0% |
| ! | AAATTCTTTTCCGACTGCTA+CGG | + | chr6.4:60604147-60604166 | None:intergenic | 35.0% |
| ! | ACAATCTTTCTATGACTTGC+AGG | - | chr6.4:60604093-60604112 | MS.gene043002:intron | 35.0% |
| ! | CTCATTGCAATCAATTTTGG+TGG | - | chr6.4:60605216-60605235 | MS.gene043002:intron | 35.0% |
| ! | GCTCATTTGTTTGGTAATCT+AGG | - | chr6.4:60601105-60601124 | MS.gene043002:intron | 35.0% |
| ! | GGTTTTTCTTTCAATAGCCA+AGG | + | chr6.4:60605097-60605116 | None:intergenic | 35.0% |
| ! | TAAACCATCAAGGTATTTGG+AGG | - | chr6.4:60605332-60605351 | MS.gene043002:intron | 35.0% |
| ! | TGCTCATATAATGCCTCTTT+TGG | - | chr6.4:60603302-60603321 | MS.gene043002:CDS | 35.0% |
| ! | TTCTAAAAAGGTCTTGACCT+TGG | - | chr6.4:60605077-60605096 | MS.gene043002:intron | 35.0% |
| !! | AAAAGAGGCATTATATGAGC+AGG | + | chr6.4:60603303-60603322 | None:intergenic | 35.0% |
| !! | AATAGAAGCACCTTTCCATT+CGG | + | chr6.4:60604468-60604487 | None:intergenic | 35.0% |
| !! | ACTAAAGGTATCTAGGCAAT+GGG | - | chr6.4:60601452-60601471 | MS.gene043002:CDS | 35.0% |
| !! | ACTTGGTATATTGATTCACG+TGG | - | chr6.4:60602644-60602663 | MS.gene043002:CDS | 35.0% |
| !! | AGCAACAAAAAGCATTCCTT+TGG | - | chr6.4:60605359-60605378 | MS.gene043002:intron | 35.0% |
| !! | TACTAAAGGTATCTAGGCAA+TGG | - | chr6.4:60601451-60601470 | MS.gene043002:CDS | 35.0% |
| !! | TATATTGATTCACGTGGTAC+TGG | - | chr6.4:60602650-60602669 | MS.gene043002:CDS | 35.0% |
| !! | TGGTTACAGTGGAGTTTTAA+GGG | - | chr6.4:60601653-60601672 | MS.gene043002:CDS | 35.0% |
| !!! | AAGCATGCTCTTGTTTTTCA+AGG | + | chr6.4:60605420-60605439 | None:intergenic | 35.0% |
| !!! | GCACCACTTTTTCATTGTAT+AGG | - | chr6.4:60600984-60601003 | MS.gene043002:intron | 35.0% |
| !!! | GCTGTTTTTTATCTTGACAG+GGG | - | chr6.4:60600231-60600250 | MS.gene043002:intron | 35.0% |
| !!! | GTGAAAGCTATAGTTTTGAC+AGG | - | chr6.4:60599533-60599552 | MS.gene043002:intron | 35.0% |
| !!! | TTATCGGTGCTCATTTTTTC+AGG | - | chr6.4:60603123-60603142 | MS.gene043002:CDS | 35.0% |
| AATTTGAAGAAGCAGCAAGG+AGG | - | chr6.4:60599504-60599523 | MS.gene043002:CDS | 40.0% | |
| ACTCTTTCCAGTAGTGAATG+AGG | - | chr6.4:60604888-60604907 | MS.gene043002:CDS | 40.0% | |
| AGAAAAGCAGCTGTTATTGG+AGG | - | chr6.4:60602042-60602061 | MS.gene043002:intron | 40.0% | |
| AGCTCTCAAGATCGTGTTAT+CGG | - | chr6.4:60603107-60603126 | MS.gene043002:CDS | 40.0% | |
| AGTCCAATATCAGTTACACC+AGG | + | chr6.4:60602006-60602025 | None:intergenic | 40.0% | |
| AGTCTTCTTGACATGTTCTC+TGG | + | chr6.4:60601571-60601590 | None:intergenic | 40.0% | |
| ATAATACCAAGTGTCAGCTC+TGG | + | chr6.4:60601054-60601073 | None:intergenic | 40.0% | |
| ATCAGTACTACCAATGGTTG+AGG | - | chr6.4:60604416-60604435 | MS.gene043002:intron | 40.0% | |
| ATGCAGAAAGTTCACCAAAC+CGG | - | chr6.4:60599900-60599919 | MS.gene043002:CDS | 40.0% | |
| ATTCTTGATCTGGTGACAGT+TGG | - | chr6.4:60603360-60603379 | MS.gene043002:CDS | 40.0% | |
| ATTGAGCATGGGATACTTCA+CGG | - | chr6.4:60601630-60601649 | MS.gene043002:intron | 40.0% | |
| ATTGCTACCGCACTTATTCT+AGG | - | chr6.4:60602084-60602103 | MS.gene043002:intron | 40.0% | |
| CAATGTTATGCCGAATGGAA+AGG | - | chr6.4:60604455-60604474 | MS.gene043002:intron | 40.0% | |
| CCACCTTTACCTGAATTCAA+GGG | + | chr6.4:60599849-60599868 | None:intergenic | 40.0% | |
| CCATGTCTGTTTATGAATGG+AGG | - | chr6.4:60602892-60602911 | MS.gene043002:CDS | 40.0% | |
| CCTCCATTCATAAACAGACA+TGG | + | chr6.4:60602895-60602914 | None:intergenic | 40.0% | |
| CCTTGAATTCAGGTAAAGGT+GGG | - | chr6.4:60599847-60599866 | MS.gene043002:CDS | 40.0% | |
| CGTATTGCTTGAGTTTGAGT+TGG | - | chr6.4:60601722-60601741 | MS.gene043002:CDS | 40.0% | |
| CTGACACTTGGTATTATTCC+GGG | - | chr6.4:60601057-60601076 | MS.gene043002:intron | 40.0% | |
| CTGGTTGTCAACTCAATTGA+AGG | - | chr6.4:60600286-60600305 | MS.gene043002:intron | 40.0% | |
| CTTAGCAATGTTATGCCGAA+TGG | - | chr6.4:60604450-60604469 | MS.gene043002:intron | 40.0% | |
| CTTGGTATTATTCCGGGATT+CGG | - | chr6.4:60601063-60601082 | MS.gene043002:intron | 40.0% | |
| CTTTCCTCCAAATACCTTGA+TGG | + | chr6.4:60605339-60605358 | None:intergenic | 40.0% | |
| GAATGAGCTTCCCAAGTTAT+CGG | - | chr6.4:60604977-60604996 | MS.gene043002:intron | 40.0% | |
| GCATAGATGTGATTGAGCAT+GGG | - | chr6.4:60601619-60601638 | MS.gene043002:intron | 40.0% | |
| GCTACCTATATCATCCTATC+AGG | - | chr6.4:60604333-60604352 | MS.gene043002:CDS | 40.0% | |
| GCTGACACTTGGTATTATTC+CGG | - | chr6.4:60601056-60601075 | MS.gene043002:intron | 40.0% | |
| GGCACAAGTTATTCTTGATC+TGG | - | chr6.4:60603350-60603369 | MS.gene043002:CDS | 40.0% | |
| GTGAGAAAAGCAGCTGTTAT+TGG | - | chr6.4:60602039-60602058 | MS.gene043002:intron | 40.0% | |
| GTTATTGGAGGAGGTCTAAT+GGG | - | chr6.4:60602054-60602073 | MS.gene043002:intron | 40.0% | |
| GTTCGTACAATCTCCAAAAG+AGG | + | chr6.4:60603318-60603337 | None:intergenic | 40.0% | |
| TAAGTTTAAGCCTGCCTAAG+AGG | - | chr6.4:60600312-60600331 | MS.gene043002:CDS | 40.0% | |
| TAATGGAAAGTCGTCCTCTT+AGG | + | chr6.4:60600329-60600348 | None:intergenic | 40.0% | |
| TACACTTTGTATACTCCCTC+CGG | - | chr6.4:60600698-60600717 | MS.gene043002:intron | 40.0% | |
| TACCTGAATTCAAGGGAGAA+AGG | + | chr6.4:60599842-60599861 | None:intergenic | 40.0% | |
| TATCTGTGATTGTGCTCCAT+AGG | - | chr6.4:60599703-60599722 | MS.gene043002:intron | 40.0% | |
| TCACAAATCGTCGGAAATAG+CGG | - | chr6.4:60600595-60600614 | MS.gene043002:CDS | 40.0% | |
| TCAGAAGAAGGGCAAAAACT+AGG | - | chr6.4:60601396-60601415 | MS.gene043002:CDS | 40.0% | |
| TCTCCCTTGAATTCAGGTAA+AGG | - | chr6.4:60599843-60599862 | MS.gene043002:CDS | 40.0% | |
| TCTTGGTCGGTGATAGAAAT+AGG | + | chr6.4:60604853-60604872 | None:intergenic | 40.0% | |
| TGACCTATCAGTACTACCAA+TGG | - | chr6.4:60604410-60604429 | MS.gene043002:intron | 40.0% | |
| TGATGCTATTGTATCTCCTG+CGG | - | chr6.4:60601425-60601444 | MS.gene043002:CDS | 40.0% | |
| TGCATAGATGTGATTGAGCA+TGG | - | chr6.4:60601618-60601637 | MS.gene043002:intron | 40.0% | |
| TGCATATGGAGGGAATGTTT+AGG | - | chr6.4:60600559-60600578 | MS.gene043002:CDS | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr6.4:60600810-60600829 | MS.gene043002:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr6.4:60600829-60600810 | None:intergenic | 40.0% | |
| TGTTATTGGAGGAGGTCTAA+TGG | - | chr6.4:60602053-60602072 | MS.gene043002:intron | 40.0% | |
| TTCCTTTCTCCCTTGAATTC+AGG | - | chr6.4:60599837-60599856 | MS.gene043002:CDS | 40.0% | |
| TTGATGCCAAAATGCAGTGT+GGG | + | chr6.4:60603046-60603065 | None:intergenic | 40.0% | |
| TTGATTAAAAGCGGGCGAAA+CGG | - | chr6.4:60604215-60604234 | MS.gene043002:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr6.4:60600809-60600828 | MS.gene043002:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr6.4:60600828-60600809 | None:intergenic | 40.0% | |
| TTTGATGCCAAAATGCAGTG+TGG | + | chr6.4:60603047-60603066 | None:intergenic | 40.0% | |
| ! | ATAGCCAAAGCATTAACAGG+TGG | + | chr6.4:60599338-60599357 | None:intergenic | 40.0% |
| ! | ATGTTGAAATAGTGGGGAAG+AGG | + | chr6.4:60603617-60603636 | None:intergenic | 40.0% |
| ! | GATGTTGGATTAGATGAAGC+CGG | + | chr6.4:60605476-60605495 | None:intergenic | 40.0% |
| ! | GGAATAGCCAAAGCATTAAC+AGG | + | chr6.4:60599341-60599360 | None:intergenic | 40.0% |
| ! | GTGGTTACAGTGGAGTTTTA+AGG | - | chr6.4:60601652-60601671 | MS.gene043002:CDS | 40.0% |
| ! | TGGTACTGGACATTGGAATT+TGG | - | chr6.4:60602664-60602683 | MS.gene043002:CDS | 40.0% |
| ! | TGTTGAAATAGTGGGGAAGA+GGG | + | chr6.4:60603616-60603635 | None:intergenic | 40.0% |
| ! | TTTGTTTGGTAATCTAGGGC+AGG | - | chr6.4:60601110-60601129 | MS.gene043002:intron | 40.0% |
| !! | AAGCAATTTTGGCCTTCCTA+TGG | - | chr6.4:60603521-60603540 | MS.gene043002:intron | 40.0% |
| !! | ACTTGGAGGTGGATTAGAAT+TGG | - | chr6.4:60600460-60600479 | MS.gene043002:intron | 40.0% |
| !! | AGCAATTTTGGCCTTCCTAT+GGG | - | chr6.4:60603522-60603541 | MS.gene043002:intron | 40.0% |
| !! | ATTGGTAGTACTGATAGGTC+AGG | + | chr6.4:60604411-60604430 | None:intergenic | 40.0% |
| !! | CAACCATTGGTAGTACTGAT+AGG | + | chr6.4:60604416-60604435 | None:intergenic | 40.0% |
| !! | TAAAGGTGTTCTGGATTACG+CGG | - | chr6.4:60602564-60602583 | MS.gene043002:intron | 40.0% |
| !! | TGCAATCAATTTTGGTGGCA+GGG | - | chr6.4:60605221-60605240 | MS.gene043002:intron | 40.0% |
| !! | TTGCAATCAATTTTGGTGGC+AGG | - | chr6.4:60605220-60605239 | MS.gene043002:intron | 40.0% |
| !!! | AGTACTGATAGGTCAGGTTT+TGG | + | chr6.4:60604405-60604424 | None:intergenic | 40.0% |
| !!! | CATTGTTTTTTGGGCTGATC+TGG | - | chr6.4:60605248-60605267 | MS.gene043002:CDS | 40.0% |
| !!! | GCTGCTTTTCTCACATTTCT+TGG | + | chr6.4:60602033-60602052 | None:intergenic | 40.0% |
| !!! | GCTTGTCGTGTTTTAGAAGA+AGG | - | chr6.4:60604910-60604929 | MS.gene043002:intron | 40.0% |
| !!! | TGTATTCACCGACTCTCTTT+TGG | - | chr6.4:60601974-60601993 | MS.gene043002:intron | 40.0% |
| AAAGCAGCTGTTATTGGAGG+AGG | - | chr6.4:60602045-60602064 | MS.gene043002:intron | 45.0% | |
| AAATGGGCACCTTGTGCATA+TGG | + | chr6.4:60603456-60603475 | None:intergenic | 45.0% | |
| AACTTGGGAAGCTCATTCCA+AGG | + | chr6.4:60604975-60604994 | None:intergenic | 45.0% | |
| AATGGGCACCTTGTGCATAT+GGG | + | chr6.4:60603455-60603474 | None:intergenic | 45.0% | |
| ACCTTCTTCCCATATGCACA+AGG | - | chr6.4:60603444-60603463 | MS.gene043002:intron | 45.0% | |
| ACCTTGTGCATATGGGAAGA+AGG | + | chr6.4:60603448-60603467 | None:intergenic | 45.0% | |
| ACTGGTGTACATTTAAGGGC+TGG | + | chr6.4:60602402-60602421 | None:intergenic | 45.0% | |
| AGAGACGAGGATTACTGGAA+AGG | + | chr6.4:60603549-60603568 | None:intergenic | 45.0% | |
| AGATGTGGACATGGTCATTG+AGG | - | chr6.4:60602594-60602613 | MS.gene043002:intron | 45.0% | |
| AGTTCACCAAACCGGTAAGT+TGG | - | chr6.4:60599908-60599927 | MS.gene043002:CDS | 45.0% | |
| ATACTTCACGGTGGTTACAG+TGG | - | chr6.4:60601642-60601661 | MS.gene043002:CDS | 45.0% | |
| ATCCGCGCATCCGATAATTT+AGG | + | chr6.4:60603890-60603909 | None:intergenic | 45.0% | |
| ATGCCTTTGATCAGACGTGT+TGG | + | chr6.4:60599602-60599621 | None:intergenic | 45.0% | |
| ATTGTGTGTGCATGTGTGTG+TGG | + | chr6.4:60603213-60603232 | None:intergenic | 45.0% | |
| CAAGGACAGATGCAATGTCA+AGG | + | chr6.4:60604957-60604976 | None:intergenic | 45.0% | |
| CACAGTGTGAGACTTATGCA+CGG | + | chr6.4:60604058-60604077 | None:intergenic | 45.0% | |
| CCCACCTTTACCTGAATTCA+AGG | + | chr6.4:60599850-60599869 | None:intergenic | 45.0% | |
| CCCTTGAATTCAGGTAAAGG+TGG | - | chr6.4:60599846-60599865 | MS.gene043002:CDS | 45.0% | |
| CTTCTAGACTCCTCAACCAT+TGG | + | chr6.4:60604429-60604448 | None:intergenic | 45.0% | |
| CTTGACATTGCATCTGTCCT+TGG | - | chr6.4:60604955-60604974 | MS.gene043002:intron | 45.0% | |
| GATTACTGGAAAGGACCCAT+AGG | + | chr6.4:60603540-60603559 | None:intergenic | 45.0% | |
| GCAGTCGGAAAAGAATTTGC+CGG | - | chr6.4:60604149-60604168 | MS.gene043002:intron | 45.0% | |
| GCATTAGTTACTTGCAGCAC+AGG | + | chr6.4:60604301-60604320 | None:intergenic | 45.0% | |
| GCTGCTCCAAAAGCTCAATT+GGG | - | chr6.4:60601024-60601043 | MS.gene043002:intron | 45.0% | |
| GCTTGTTCCTGATGTATCTG+TGG | - | chr6.4:60600261-60600280 | MS.gene043002:intron | 45.0% | |
| GGAATCTGCCAAAAGAGAGT+CGG | + | chr6.4:60601985-60602004 | None:intergenic | 45.0% | |
| GTATCATCTCCACGATCTCT+TGG | + | chr6.4:60604870-60604889 | None:intergenic | 45.0% | |
| TCCCTAAATTATCGGATGCG+CGG | - | chr6.4:60603885-60603904 | MS.gene043002:intron | 45.0% | |
| TCCGCGCATCCGATAATTTA+GGG | + | chr6.4:60603889-60603908 | None:intergenic | 45.0% | |
| TGATGCCAAAATGCAGTGTG+GGG | + | chr6.4:60603045-60603064 | None:intergenic | 45.0% | |
| TGCCCTTCTTCTGATGTGAT+TGG | + | chr6.4:60601390-60601409 | None:intergenic | 45.0% | |
| TGCTCAGCGCACAATATCAA+AGG | - | chr6.4:60601896-60601915 | MS.gene043002:intron | 45.0% | |
| TGCTGCTCCAAAAGCTCAAT+TGG | - | chr6.4:60601023-60601042 | MS.gene043002:intron | 45.0% | |
| TTGACTCAACAAAAGGCCGA+AGG | - | chr6.4:60602526-60602545 | MS.gene043002:intron | 45.0% | |
| ! | AAAGGTGGGAGATTTTCTGG+AGG | - | chr6.4:60599861-60599880 | MS.gene043002:CDS | 45.0% |
| ! | AAGGTGGGAGATTTTCTGGA+GGG | - | chr6.4:60599862-60599881 | MS.gene043002:CDS | 45.0% |
| ! | ACTCTCTTTTGGCAGATTCC+TGG | - | chr6.4:60601985-60602004 | MS.gene043002:intron | 45.0% |
| ! | ATTCACGTGGTACTGGACAT+TGG | - | chr6.4:60602657-60602676 | MS.gene043002:CDS | 45.0% |
| ! | CTTCAGATTGAAGGCGTGTT+TGG | - | chr6.4:60602780-60602799 | MS.gene043002:intron | 45.0% |
| ! | GCACTGACACTTCAGATTGA+AGG | - | chr6.4:60602771-60602790 | MS.gene043002:intron | 45.0% |
| ! | GCCCAAGTTGGCCAAAAAAT+GGG | + | chr6.4:60603472-60603491 | None:intergenic | 45.0% |
| ! | GGTAAAGGTGGGAGATTTTC+TGG | - | chr6.4:60599858-60599877 | MS.gene043002:CDS | 45.0% |
| ! | GTAATCACATGTATCGGTGC+CGG | + | chr6.4:60602809-60602828 | None:intergenic | 45.0% |
| ! | GTCAAACCAACTTACCGGTT+TGG | + | chr6.4:60599917-60599936 | None:intergenic | 45.0% |
| ! | TAATCACATGTATCGGTGCC+GGG | + | chr6.4:60602808-60602827 | None:intergenic | 45.0% |
| ! | TGTTGATTACCTCCGAATCC+CGG | + | chr6.4:60601078-60601097 | None:intergenic | 45.0% |
| ! | TTATGCACGGTGGTTTGGAT+TGG | + | chr6.4:60604045-60604064 | None:intergenic | 45.0% |
| ! | TTCTATGACTTGCAGGCTTC+AGG | - | chr6.4:60604100-60604119 | MS.gene043002:intron | 45.0% |
| ! | TTGCTGAAAAGCGCAAACCT+TGG | - | chr6.4:60601484-60601503 | MS.gene043002:intron | 45.0% |
| !! | AGGTGGATTAGAATTGGCCA+TGG | - | chr6.4:60600466-60600485 | MS.gene043002:intron | 45.0% |
| !! | CGGAGGTACTAAAGGTATCT+AGG | - | chr6.4:60601445-60601464 | MS.gene043002:CDS | 45.0% |
| !! | CTCACTGCTTAAAGGTGTTC+TGG | - | chr6.4:60602555-60602574 | MS.gene043002:intron | 45.0% |
| !! | GAATTTGCCGGTTCATTTGC+TGG | - | chr6.4:60604161-60604180 | MS.gene043002:intron | 45.0% |
| !! | GCAATCAATTTTGGTGGCAG+GGG | - | chr6.4:60605222-60605241 | MS.gene043002:intron | 45.0% |
| !! | TCTATGCAAGCTTGTTGCTG+AGG | + | chr6.4:60601606-60601625 | None:intergenic | 45.0% |
| !!! | CAGGGGTGGCATTGTTTTTT+GGG | - | chr6.4:60605239-60605258 | MS.gene043002:CDS | 45.0% |
| !!! | GCCCATTTTTTGGCCAACTT+GGG | - | chr6.4:60603468-60603487 | MS.gene043002:intron | 45.0% |
| !!! | GTTTTTTGGGCTGATCTGGT+TGG | - | chr6.4:60605252-60605271 | MS.gene043002:CDS | 45.0% |
| !!! | TGCACAAGGTGCCCATTTTT+TGG | - | chr6.4:60603458-60603477 | MS.gene043002:intron | 45.0% |
| !!! | TGCCCATTTTTTGGCCAACT+TGG | - | chr6.4:60603467-60603486 | MS.gene043002:intron | 45.0% |
| AAGGTACACAGCGTCTTCCA+AGG | - | chr6.4:60601196-60601215 | MS.gene043002:intron | 50.0% | |
| ACCAGCTCCACAGATACATC+AGG | + | chr6.4:60600271-60600290 | None:intergenic | 50.0% | |
| ACTGGAAAGGACCCATAGGA+AGG | + | chr6.4:60603536-60603555 | None:intergenic | 50.0% | |
| AGAGAGGCCTACCGATAACT+TGG | + | chr6.4:60604991-60605010 | None:intergenic | 50.0% | |
| AGTGTGAGACTTATGCACGG+TGG | + | chr6.4:60604055-60604074 | None:intergenic | 50.0% | |
| CATAGACGCGCCTTTGATGT+TGG | + | chr6.4:60605491-60605510 | None:intergenic | 50.0% | |
| CATCTCCACGATCTCTTGGT+CGG | + | chr6.4:60604866-60604885 | None:intergenic | 50.0% | |
| CGACAAGCCTCATTCACTAC+TGG | + | chr6.4:60604898-60604917 | None:intergenic | 50.0% | |
| CTAGACGTAGGATAGGCCAT+AGG | - | chr6.4:60605126-60605145 | MS.gene043002:intron | 50.0% | |
| CTTCAGGACTTGTCCGGATA+TGG | - | chr6.4:60604116-60604135 | MS.gene043002:intron | 50.0% | |
| GAGACTTATGCACGGTGGTT+TGG | + | chr6.4:60604050-60604069 | None:intergenic | 50.0% | |
| GAGAGGCCTACCGATAACTT+GGG | + | chr6.4:60604990-60605009 | None:intergenic | 50.0% | |
| GAGCTTCCCAAGTTATCGGT+AGG | - | chr6.4:60604981-60605000 | MS.gene043002:intron | 50.0% | |
| GATACCTTTAGTACCTCCGC+AGG | + | chr6.4:60601444-60601463 | None:intergenic | 50.0% | |
| GATGCCAAAATGCAGTGTGG+GGG | + | chr6.4:60603044-60603063 | None:intergenic | 50.0% | |
| GCACCAACACGTCTGATCAA+AGG | - | chr6.4:60599596-60599615 | MS.gene043002:intron | 50.0% | |
| GCTATAGCACTGTAGCGTAG+CGG | + | chr6.4:60600633-60600652 | None:intergenic | 50.0% | |
| GGTATTATTCCGGGATTCGG+AGG | - | chr6.4:60601066-60601085 | MS.gene043002:intron | 50.0% | |
| GTCAGTGTTAGTGTCGTGTC+TGG | - | chr6.4:60599674-60599693 | MS.gene043002:intron | 50.0% | |
| GTGGACATGGTCATTGAGGT+TGG | - | chr6.4:60602598-60602617 | MS.gene043002:intron | 50.0% | |
| TATCACCGACCAAGAGATCG+TGG | - | chr6.4:60604858-60604877 | MS.gene043002:intron | 50.0% | |
| TATGGAGTTGCCGTAGCAGT+CGG | - | chr6.4:60604134-60604153 | MS.gene043002:intron | 50.0% | |
| TCCTGATGTATCTGTGGAGC+TGG | - | chr6.4:60600267-60600286 | MS.gene043002:intron | 50.0% | |
| TCTCAATACCTCACGTGCGT+TGG | + | chr6.4:60601544-60601563 | None:intergenic | 50.0% | |
| TGCTACGGCAACTCCATATC+CGG | + | chr6.4:60604132-60604151 | None:intergenic | 50.0% | |
| TGCTATTGTATCTCCTGCGG+AGG | - | chr6.4:60601428-60601447 | MS.gene043002:CDS | 50.0% | |
| TTAGACGTCCCAACAAGCCT+TGG | + | chr6.4:60601216-60601235 | None:intergenic | 50.0% | |
| ! | AGCGTCTTCCAAGGCTTGTT+GGG | - | chr6.4:60601205-60601224 | MS.gene043002:intron | 50.0% |
| ! | ATGTCCCCCACACTGCATTT+TGG | - | chr6.4:60603037-60603056 | MS.gene043002:intron | 50.0% |
| ! | CGCCCAAGTTGGCCAAAAAA+TGG | + | chr6.4:60603473-60603492 | None:intergenic | 50.0% |
| ! | GCTTGTTGCTGAGGCAAATG+TGG | + | chr6.4:60601597-60601616 | None:intergenic | 50.0% |
| ! | GTAGTGGAGTTGGGAATGTG+CGG | + | chr6.4:60604187-60604206 | None:intergenic | 50.0% |
| ! | GTCTTGTCTGAAACCGCGAA+AGG | - | chr6.4:60601855-60601874 | MS.gene043002:intron | 50.0% |
| ! | GTGGTTTGGATTGGATGCCA+TGG | + | chr6.4:60604036-60604055 | None:intergenic | 50.0% |
| !! | ATCAATTTTGGTGGCAGGGG+TGG | - | chr6.4:60605225-60605244 | MS.gene043002:intron | 50.0% |
| !! | ATCTCCTGCGGAGGTACTAA+AGG | - | chr6.4:60601437-60601456 | MS.gene043002:CDS | 50.0% |
| !!! | GCAGGGGTGGCATTGTTTTT+TGG | - | chr6.4:60605238-60605257 | MS.gene043002:CDS | 50.0% |
| !!! | TTTTTTGGCCAACTTGGGCG+TGG | - | chr6.4:60603473-60603492 | MS.gene043002:intron | 50.0% |
| AAGCGACCAACAGGAGCCTA+TGG | + | chr6.4:60605145-60605164 | None:intergenic | 55.0% | |
| ACCTAGCCTGAGCTAGACGT+AGG | - | chr6.4:60605114-60605133 | MS.gene043002:intron | 55.0% | |
| ACTTGGTTCCAACGCACGTG+AGG | - | chr6.4:60601533-60601552 | MS.gene043002:intron | 55.0% | |
| CAGCGTCTTCCAAGGCTTGT+TGG | - | chr6.4:60601204-60601223 | MS.gene043002:intron | 55.0% | |
| CCTGTTGTTGCAGCAGTCGA+GGG | - | chr6.4:60600431-60600450 | MS.gene043002:intron | 55.0% | |
| CTGTTGTTGCAGCAGTCGAG+GGG | - | chr6.4:60600432-60600451 | MS.gene043002:intron | 55.0% | |
| GAACACATCCACGCCCAAGT+TGG | + | chr6.4:60603484-60603503 | None:intergenic | 55.0% | |
| GAATCGGTCAAGCGACCAAC+AGG | + | chr6.4:60605154-60605173 | None:intergenic | 55.0% | |
| GAGCATGGGATACTTCACGG+TGG | - | chr6.4:60601633-60601652 | MS.gene043002:intron | 55.0% | |
| GATAGGCCATAGGCTCCTGT+TGG | - | chr6.4:60605136-60605155 | MS.gene043002:intron | 55.0% | |
| GCCTGAGCTAGACGTAGGAT+AGG | - | chr6.4:60605119-60605138 | MS.gene043002:intron | 55.0% | |
| GGAAAGTCGTCCTCTTAGGC+AGG | + | chr6.4:60600325-60600344 | None:intergenic | 55.0% | |
| GGCGCTCTCTCACTGCTTAA+AGG | - | chr6.4:60602547-60602566 | MS.gene043002:intron | 55.0% | |
| GTATTGCCTGCAGAGTGCAC+CGG | - | chr6.4:60605454-60605473 | MS.gene043002:CDS | 55.0% | |
| GTGCAGTTACCGACCACAAC+AGG | + | chr6.4:60603405-60603424 | None:intergenic | 55.0% | |
| GTTGTGGTCGGTAACTGCAC+TGG | - | chr6.4:60603405-60603424 | MS.gene043002:intron | 55.0% | |
| TGCAGGCTTCAGGACTTGTC+CGG | - | chr6.4:60604110-60604129 | MS.gene043002:intron | 55.0% | |
| TGTGCGGCCAGCAAATGAAC+CGG | + | chr6.4:60604171-60604190 | None:intergenic | 55.0% | |
| TTGGAGCAGCAACACGTGCA+TGG | + | chr6.4:60601014-60601033 | None:intergenic | 55.0% | |
| TTGTTCCGCTGTACTCCCTC+CGG | + | chr6.4:60600828-60600847 | None:intergenic | 55.0% | |
| ! | GCCTATCCTACGTCTAGCTC+AGG | + | chr6.4:60605123-60605142 | None:intergenic | 55.0% |
| ! | GGCAGGCCCAATTGAGCTTT+TGG | + | chr6.4:60601033-60601052 | None:intergenic | 55.0% |
| ! | TACCAAGTGTCAGCTCTGGC+AGG | + | chr6.4:60601050-60601069 | None:intergenic | 55.0% |
| ! | TCCTACGTCTAGCTCAGGCT+AGG | + | chr6.4:60605118-60605137 | None:intergenic | 55.0% |
| !! | AAGCAGTGAGAGAGCGCCTT+CGG | + | chr6.4:60602545-60602564 | None:intergenic | 55.0% |
| !! | GGAGGAGGTCTAATGGGTTC+TGG | - | chr6.4:60602060-60602079 | MS.gene043002:intron | 55.0% |
| !! | TTGAAGGCGTGTTTGGTGCC+CGG | - | chr6.4:60602787-60602806 | MS.gene043002:intron | 55.0% |
| ATGAAGCCGGTGCACTCTGC+AGG | + | chr6.4:60605463-60605482 | None:intergenic | 60.0% | |
| CCCTCGACTGCTGCAACAAC+AGG | + | chr6.4:60600434-60600453 | None:intergenic | 60.0% | |
| GCCTGTTGTTGCAGCAGTCG+AGG | - | chr6.4:60600430-60600449 | MS.gene043002:intron | 60.0% | |
| ! | AGTGACCGGAGGGAGTACAG+CGG | - | chr6.4:60600820-60600839 | MS.gene043002:intron | 60.0% |
| GAGGGGCTTGCACTTGGAGG+TGG | - | chr6.4:60600449-60600468 | MS.gene043002:intron | 65.0% | |
| GCAGTCGAGGGGCTTGCACT+TGG | - | chr6.4:60600443-60600462 | MS.gene043002:intron | 65.0% | |
| GGCCTGCCAGAGCTGACACT+TGG | - | chr6.4:60601045-60601064 | MS.gene043002:intron | 65.0% | |
| GTCGAGGGGCTTGCACTTGG+AGG | - | chr6.4:60600446-60600465 | MS.gene043002:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 60599269 | 60605511 | 60599269 | ID=MS.gene043002 |
| chr6.4 | mRNA | 60599269 | 60605511 | 60599269 | ID=MS.gene043002.t1;Parent=MS.gene043002 |
| chr6.4 | exon | 60605418 | 60605511 | 60605418 | ID=MS.gene043002.t1.exon1;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60605418 | 60605511 | 60605418 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60605226 | 60605297 | 60605226 | ID=MS.gene043002.t1.exon2;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60605226 | 60605297 | 60605226 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60604859 | 60604921 | 60604859 | ID=MS.gene043002.t1.exon3;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60604859 | 60604921 | 60604859 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60604473 | 60604529 | 60604473 | ID=MS.gene043002.t1.exon4;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60604473 | 60604529 | 60604473 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60604293 | 60604360 | 60604293 | ID=MS.gene043002.t1.exon5;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60604293 | 60604360 | 60604293 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60603693 | 60603774 | 60603693 | ID=MS.gene043002.t1.exon6;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60603693 | 60603774 | 60603693 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60603526 | 60603581 | 60603526 | ID=MS.gene043002.t1.exon7;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60603526 | 60603581 | 60603526 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60603106 | 60603402 | 60603106 | ID=MS.gene043002.t1.exon8;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60603106 | 60603402 | 60603106 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60602863 | 60602949 | 60602863 | ID=MS.gene043002.t1.exon9;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60602863 | 60602949 | 60602863 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60602606 | 60602780 | 60602606 | ID=MS.gene043002.t1.exon10;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60602606 | 60602780 | 60602606 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60602165 | 60602286 | 60602165 | ID=MS.gene043002.t1.exon11;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60602165 | 60602286 | 60602165 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60601636 | 60601799 | 60601636 | ID=MS.gene043002.t1.exon12;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60601636 | 60601799 | 60601636 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60601227 | 60601481 | 60601227 | ID=MS.gene043002.t1.exon13;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60601227 | 60601481 | 60601227 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60600544 | 60600665 | 60600544 | ID=MS.gene043002.t1.exon14;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60600544 | 60600665 | 60600544 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60600304 | 60600425 | 60600304 | ID=MS.gene043002.t1.exon15;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60600304 | 60600425 | 60600304 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60599782 | 60599930 | 60599782 | ID=MS.gene043002.t1.exon16;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60599782 | 60599930 | 60599782 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60599400 | 60599538 | 60599400 | ID=MS.gene043002.t1.exon17;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60599400 | 60599538 | 60599400 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| chr6.4 | exon | 60599269 | 60599313 | 60599269 | ID=MS.gene043002.t1.exon18;Parent=MS.gene043002.t1 |
| chr6.4 | CDS | 60599269 | 60599313 | 60599269 | ID=cds.MS.gene043002.t1;Parent=MS.gene043002.t1 |
| Gene Sequence |
| Protein sequence |
