AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043495

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043495.t1 MTR_2g091135 95.216 648 19 1 1 636 1 648 0.0 1261
MS.gene043495.t1 MTR_2g091135 95.118 594 17 1 1 582 1 594 0.0 1140
MS.gene043495.t1 MTR_2g091130 93.511 601 38 1 1 600 1 601 0.0 1129
MS.gene043495.t1 MTR_4g079650 63.474 449 127 8 135 581 497 910 2.65e-177 529
MS.gene043495.t1 MTR_4g079650 63.474 449 127 8 135 581 497 910 5.78e-177 528
MS.gene043495.t1 MTR_4g079650 67.024 373 115 5 135 505 497 863 3.87e-162 487
MS.gene043495.t1 MTR_4g092900 42.724 323 128 7 261 548 125 425 2.53e-66 226
MS.gene043495.t1 MTR_4g092900 42.724 323 128 7 261 548 125 425 2.97e-66 226
MS.gene043495.t1 MTR_4g092880 39.939 328 118 9 253 548 121 401 8.16e-56 197
MS.gene043495.t1 MTR_3g075040 40.458 262 115 6 296 548 207 436 1.20e-48 180
MS.gene043495.t1 MTR_3g075040 40.458 262 115 6 296 548 207 436 4.48e-48 181
MS.gene043495.t1 MTR_4g092880 39.700 267 106 8 253 487 121 364 2.72e-41 154
MS.gene043495.t1 MTR_0018s0090 58.095 105 44 0 293 397 195 299 2.12e-36 145
MS.gene043495.t1 MTR_0018s0090 47.260 146 70 2 293 437 195 334 3.53e-36 145
MS.gene043495.t1 MTR_2g018270 56.190 105 46 0 299 403 83 187 1.76e-34 138
MS.gene043495.t1 MTR_6g033375 32.068 237 140 4 302 534 75 294 9.83e-28 115
MS.gene043495.t1 MTR_8g070660 29.268 246 155 4 292 534 90 319 1.30e-26 112
MS.gene043495.t1 MTR_8g070660 44.444 108 57 1 292 396 90 197 3.71e-25 105
MS.gene043495.t1 MTR_5g069490 32.328 232 124 5 308 536 111 312 1.62e-23 102
MS.gene043495.t1 MTR_2g437920 45.977 87 44 1 310 393 146 232 1.86e-16 82.0
MS.gene043495.t1 MTR_6g045290 28.372 215 123 5 332 536 79 272 7.98e-14 74.7
MS.gene043495.t1 MTR_2g005820 38.298 94 57 1 302 394 202 295 4.14e-12 69.7
MS.gene043495.t1 MTR_0662s0020 32.743 113 67 4 299 405 138 247 8.87e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043495.t1 AT1G06230 60.730 466 162 8 143 595 272 729 1.15e-164 490
MS.gene043495.t1 AT1G06230 60.730 466 162 8 143 595 272 729 1.15e-164 490
MS.gene043495.t1 AT1G06230 60.730 466 162 8 143 595 272 729 1.15e-164 490
MS.gene043495.t1 AT1G06230 60.730 466 162 8 143 595 272 729 1.15e-164 490
MS.gene043495.t1 AT1G73150 49.051 316 133 6 262 558 86 392 9.66e-83 267
MS.gene043495.t1 AT1G73150 49.051 316 133 6 262 558 86 392 2.48e-82 267
MS.gene043495.t1 AT1G17790 44.762 315 137 7 286 573 122 426 3.17e-71 238
MS.gene043495.t1 AT5G14270 36.882 263 130 6 292 549 134 365 2.69e-42 163
MS.gene043495.t1 AT5G14270 36.882 263 130 6 292 549 134 365 2.69e-42 163
MS.gene043495.t1 AT5G14270 36.882 263 130 6 292 549 134 365 2.95e-42 162
MS.gene043495.t1 AT3G27260 39.919 248 117 7 295 536 176 397 5.43e-42 162
MS.gene043495.t1 AT3G27260 40.726 248 115 8 295 536 176 397 8.55e-42 162
MS.gene043495.t1 AT3G27260 40.726 248 115 8 295 536 127 348 9.09e-42 162
MS.gene043495.t1 AT3G27260 40.726 248 115 8 295 536 176 397 9.82e-42 162
MS.gene043495.t1 AT3G01770 38.912 239 110 5 296 530 130 336 5.42e-39 150
MS.gene043495.t1 AT3G01770 38.136 236 116 5 296 530 130 336 1.05e-38 151
MS.gene043495.t1 AT5G63320 35.659 258 133 5 292 543 158 388 4.25e-36 142
MS.gene043495.t1 AT5G63320 35.659 258 133 5 292 543 158 388 4.25e-36 142
MS.gene043495.t1 AT5G63320 36.047 258 132 6 292 543 158 388 6.00e-36 145
MS.gene043495.t1 AT5G65630 61.000 100 39 0 291 390 165 264 3.85e-33 135
MS.gene043495.t1 AT5G65630 52.830 106 49 1 443 548 374 478 2.31e-26 114
MS.gene043495.t1 AT5G10550 59.000 100 41 0 291 390 170 269 7.70e-32 130
MS.gene043495.t1 AT5G10550 54.167 96 44 0 453 548 378 473 1.78e-24 108
MS.gene043495.t1 AT2G34900 30.182 275 172 4 269 543 88 342 1.09e-31 127
MS.gene043495.t1 AT2G34900 31.048 248 155 3 296 543 1 232 1.17e-31 124
MS.gene043495.t1 AT5G46550 47.107 121 57 2 299 413 73 192 2.39e-28 119
MS.gene043495.t1 AT3G52280 28.395 243 153 4 296 534 95 320 6.56e-24 104
MS.gene043495.t1 AT3G52280 28.395 243 153 4 296 534 112 337 1.08e-23 103

Find 175 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAAAGACTCATGCTTTC+CGG 0.233514 2.2:-8308961 MS.gene043495:CDS
ACATGAACATCTTGCCCTTT+AGG 0.234304 2.2:+8309106 None:intergenic
GGAGAAATGGGACATGGATT+TGG 0.255723 2.2:-8309376 MS.gene043495:CDS
ATGAGGTATGGCATGGATTA+TGG 0.261727 2.2:-8309013 MS.gene043495:CDS
CGGTGAGGTCTTTGGTGATT+AGG 0.271715 2.2:-8309732 MS.gene043495:CDS
CTAACACCATTACACTTAAC+TGG 0.281372 2.2:+8309557 None:intergenic
CGAGTCAAGCTCATGGGATT+TGG 0.293666 2.2:+8308884 None:intergenic
TCAGCAGTTGGATAGTGTTT+TGG 0.293996 2.2:-8310019 MS.gene043495:CDS
CTCCGCCAGTTGTGAATTCT+AGG 0.296493 2.2:-8309975 MS.gene043495:CDS
GATCGTTATAAGGTTGATAA+TGG 0.302993 2.2:-8309652 MS.gene043495:CDS
GTTGTTCCTCATACTCATTC+TGG 0.307616 2.2:-8310102 MS.gene043495:CDS
GAGAAATGGGACATGGATTT+GGG 0.327055 2.2:-8309375 MS.gene043495:CDS
GTGTGGATGCAGAGACTCTT+TGG 0.328188 2.2:-8308661 MS.gene043495:CDS
CAACTATAACTGGTGGTTCT+TGG 0.330269 2.2:+8308446 None:intergenic
ACAATAGCATCTAGTTTATC+AGG 0.330645 2.2:+8308752 None:intergenic
CCTTGAAACGGTGAGGTCTT+TGG 0.332395 2.2:-8309740 MS.gene043495:CDS
AGCAGCTCAAGCAGTGATTC+TGG 0.334206 2.2:-8308230 MS.gene043495:CDS
CGCAAGCAAGAATTCCGAAT+TGG 0.349984 2.2:+8309465 None:intergenic
GTGTTCCGAGAGAGGCTAAT+AGG 0.362707 2.2:-8309588 MS.gene043495:CDS
TCGGCGTCCGGGTCTGATGC+AGG 0.368917 2.2:-8308070 MS.gene043495:CDS
CTCGGGGCCTCAACTATAAC+TGG 0.375349 2.2:+8308436 None:intergenic
TTCAATTTCGTCATCATGTT+GGG 0.377251 2.2:+8308697 None:intergenic
GGCTCCGGAGGATGGGAATT+CGG 0.378060 2.2:-8309998 MS.gene043495:CDS
GGGGAAATTCGAGTAGATAA+TGG 0.378135 2.2:-8308272 MS.gene043495:CDS
CATCTCACATCCGATGGACT+TGG 0.390431 2.2:-8309227 MS.gene043495:CDS
GAAGCATGGCGTTGGAGAAA+TGG 0.393841 2.2:-8309389 MS.gene043495:CDS
AGTGATAGCTCCTCGGCGTC+CGG 0.402526 2.2:-8308082 MS.gene043495:CDS
TGAGGTATGGCATGGATTAT+GGG 0.405998 2.2:-8309012 MS.gene043495:CDS
TACCTGCTTGTCTTTCTCTC+GGG 0.411814 2.2:+8308419 None:intergenic
CAACGGATGGCTGGGAGGTA+TGG 0.413417 2.2:-8309697 MS.gene043495:CDS
ACATCCTCCGCAAACTCCTT+TGG 0.418265 2.2:+8309163 None:intergenic
GAAGAGAAACAACGGATGGC+TGG 0.423094 2.2:-8309706 MS.gene043495:CDS
ATACCTGCTTGTCTTTCTCT+CGG 0.424151 2.2:+8308418 None:intergenic
GACTTCTTGTTACTCTCAGC+AGG 0.426666 2.2:+8309427 None:intergenic
GAATAGAACTGGTTCGCCTT+AGG 0.428319 2.2:+8309487 None:intergenic
CACTCTGAGGTAGCTTCTGC+AGG 0.429357 2.2:-8309610 MS.gene043495:CDS
GGAGGATAAAGTTAATTCCT+TGG 0.435615 2.2:-8310127 MS.gene043495:CDS
ATTCCGAATTGGAATAGAAC+TGG 0.439085 2.2:+8309476 None:intergenic
CAGCATTATTCGAGGAAAGA+TGG 0.443395 2.2:-8309066 MS.gene043495:CDS
GGGAAATTCGAGTAGATAAT+GGG 0.444542 2.2:-8308271 MS.gene043495:CDS
ACCGCCACAGTCACTGTTGA+TGG 0.445839 2.2:-8310072 MS.gene043495:CDS
CCATGACATATAATCCTAAA+GGG 0.451805 2.2:-8309120 MS.gene043495:CDS
GATCATTAAGAAACAAAATT+CGG 0.453860 2.2:-8308726 MS.gene043495:CDS
CTTCAATTTCGTCATCATGT+TGG 0.459358 2.2:+8308696 None:intergenic
AAGCATGGCGTTGGAGAAAT+GGG 0.460416 2.2:-8309388 MS.gene043495:CDS
GCCATGACATATAATCCTAA+AGG 0.461758 2.2:-8309121 MS.gene043495:CDS
AAGAGATGCGGGAGATTAAG+AGG 0.463397 2.2:-8309777 MS.gene043495:CDS
TGTGTCTGTGGATCGTTATA+AGG 0.467282 2.2:-8309662 MS.gene043495:CDS
TCCCCTTGCACAGGCAAGGA+TGG 0.467964 2.2:+8308290 None:intergenic
TAGTCTTGATGTTGTTCAGC+TGG 0.468758 2.2:-8309896 MS.gene043495:CDS
GATAAGAAGGGGTTGGAGAA+TGG 0.469340 2.2:-8309832 MS.gene043495:CDS
TACACGCCAGTTAAGTGTAA+TGG 0.471994 2.2:-8309563 MS.gene043495:CDS
ATCGTTATAAGGTTGATAAT+GGG 0.472951 2.2:-8309651 MS.gene043495:CDS
TTGATGGGACGAAGGATAAC+GGG 0.473241 2.2:-8310056 MS.gene043495:CDS
CCCCTTGCACAGGCAAGGAT+GGG 0.474347 2.2:+8308291 None:intergenic
TTATCGTCACATCTTAAAGC+TGG 0.477773 2.2:+8309850 None:intergenic
CCCTTTAGGATTATATGTCA+TGG 0.480279 2.2:+8309120 None:intergenic
TTATCCGGATCGTTTGCCTT+CGG 0.482533 2.2:+8308833 None:intergenic
TTTAAGATGTGACGATAAGA+AGG 0.482700 2.2:-8309845 MS.gene043495:CDS
AAAGCCGAAGGCAAACGATC+CGG 0.484204 2.2:-8308837 MS.gene043495:CDS
GAACCAGTTCTATTCCAATT+CGG 0.484886 2.2:-8309479 MS.gene043495:CDS
TGTGGATGCAGAGACTCTTT+GGG 0.487754 2.2:-8308660 MS.gene043495:CDS
GAGATTAAGAGGAAGCTTGA+GGG 0.487765 2.2:-8309766 MS.gene043495:CDS
CCAGTGGATGTTGAACGTCT+TGG 0.491052 2.2:-8309271 MS.gene043495:CDS
GTCAAGCTCATGGGATTTGG+AGG 0.494301 2.2:+8308887 None:intergenic
TCTAGCTTGAATAGCAAGTT+CGG 0.494718 2.2:+8308580 None:intergenic
GTCGAGTTTGTATCGTAAGC+AGG 0.496356 2.2:-8309929 MS.gene043495:CDS
AGTCGAGGCTGAGCAAGAAT+TGG 0.497693 2.2:-8309195 MS.gene043495:CDS
TTGGAGAATGGTGTTAAGAA+TGG 0.503549 2.2:-8309820 MS.gene043495:CDS
TTAAGAATGGACTGGCTTCA+CGG 0.503952 2.2:-8309807 MS.gene043495:CDS
ATTGTAATGTGACTCTATAA+TGG 0.505035 2.2:+8309042 None:intergenic
TAATGTTTCTGCTCAGCAGT+TGG 0.506764 2.2:-8310031 MS.gene043495:CDS
CCCTTGCACAGGCAAGGATG+GGG 0.511507 2.2:+8308292 None:intergenic
TCCAACCTAGAATTCACAAC+TGG 0.516769 2.2:+8309970 None:intergenic
CATGGAAAGAAGCATGGCGT+TGG 0.520162 2.2:-8309397 MS.gene043495:CDS
GTGATAGCTCCTCGGCGTCC+GGG 0.521986 2.2:-8308081 MS.gene043495:CDS
CCAAAGACCTCACCGTTTCA+AGG 0.522247 2.2:+8309740 None:intergenic
GTTGATGGGACGAAGGATAA+CGG 0.523599 2.2:-8310057 MS.gene043495:CDS
GCCAGTTGTGAATTCTAGGT+TGG 0.525168 2.2:-8309971 MS.gene043495:CDS
AGCATTATTCGAGGAAAGAT+GGG 0.527838 2.2:-8309065 MS.gene043495:CDS
AGTGTAATGGTGTTAGAGAA+TGG 0.529484 2.2:-8309550 MS.gene043495:CDS
TGATGAAACACAAGCACGGT+TGG 0.531315 2.2:-8309306 MS.gene043495:CDS
CCCATCCTTGCCTGTGCAAG+GGG 0.531370 2.2:-8308291 MS.gene043495:CDS
ACGGTCAAAGCAAGAGATGC+GGG 0.533396 2.2:-8309788 MS.gene043495:CDS
GCCCCGAGAGAAAGACAAGC+AGG 0.535875 2.2:-8308421 MS.gene043495:intron
CCCCATCCTTGCCTGTGCAA+GGG 0.536347 2.2:-8308292 MS.gene043495:CDS
AAGAGAAACAACGGATGGCT+GGG 0.537737 2.2:-8309705 MS.gene043495:CDS
CAAATCACCAAAGGAGTTTG+CGG 0.541456 2.2:-8309170 MS.gene043495:CDS
TACAATCATGAGATGAGGTA+TGG 0.542192 2.2:-8309025 MS.gene043495:CDS
ATCAACAGTGACTGTGGCGG+TGG 0.543115 2.2:+8310074 None:intergenic
GATGAAACACAAGCACGGTT+GGG 0.544423 2.2:-8309305 MS.gene043495:CDS
CGGCGTCCGGGTCTGATGCA+GGG 0.544623 2.2:-8308069 MS.gene043495:CDS
AGGGCAAGATGTTCATGTAA+TGG 0.545167 2.2:-8309101 MS.gene043495:CDS
TCATGTCAAGAGGTGGTGGC+CGG 0.545589 2.2:+8308942 None:intergenic
ATGTGACGATAAGAAGGGGT+TGG 0.545752 2.2:-8309839 MS.gene043495:CDS
TATAAGGTTGATAATGGGAG+TGG 0.547430 2.2:-8309646 MS.gene043495:CDS
CCAAGACGTTCAACATCCAC+TGG 0.547510 2.2:+8309271 None:intergenic
GGGGACTGTAGTTGAAGATA+AGG 0.547595 2.2:-8310214 MS.gene043495:CDS
AATTTCCCCTTGCACAGGCA+AGG 0.547685 2.2:+8308286 None:intergenic
ACTCGAATTTCCCCTTGCAC+AGG 0.550360 2.2:+8308281 None:intergenic
GATGTTGTTCAGCTGGAAGA+TGG 0.557828 2.2:-8309889 MS.gene043495:CDS
ATCTCACATCCGATGGACTT+GGG 0.558638 2.2:-8309226 MS.gene043495:CDS
GGTTAGTGAAAGTGTTGAGA+AGG 0.559698 2.2:-8309521 MS.gene043495:CDS
ACCTGCTTGTCTTTCTCTCG+GGG 0.559840 2.2:+8308420 None:intergenic
CCGCCACAGTCACTGTTGAT+GGG 0.560509 2.2:-8310071 MS.gene043495:CDS
GCTTGAGGGCGACCTTGAAA+CGG 0.560792 2.2:-8309752 MS.gene043495:CDS
CACCACCTCTTGACATGAGA+AGG 0.560962 2.2:-8308937 MS.gene043495:CDS
AGGTGAAGGTGCAGAAATCG+CGG 0.564222 2.2:+8308988 None:intergenic
TATTATCATCTCACATCCGA+TGG 0.564977 2.2:-8309233 MS.gene043495:CDS
CGGATGGCTGGGAGGTATGG+TGG 0.565095 2.2:-8309694 MS.gene043495:CDS
AAAGTTTGAGCAAATACAAG+AGG 0.565822 2.2:-8308607 MS.gene043495:CDS
GTAGCACCAGAATGAGTATG+AGG 0.566136 2.2:+8310096 None:intergenic
TTCTGATAGTGATAGCTCCT+CGG 0.567271 2.2:-8308089 MS.gene043495:CDS
GTAAACCTATTAGCCTCTCT+CGG 0.567513 2.2:+8309583 None:intergenic
AGCTGAACGAGTCAAGCTCA+TGG 0.568868 2.2:+8308877 None:intergenic
GGAGCCGAATTCCCATCCTC+CGG 0.570922 2.2:+8309994 None:intergenic
CTTCTCATGTCAAGAGGTGG+TGG 0.571582 2.2:+8308938 None:intergenic
TTAAGATGTGACGATAAGAA+GGG 0.571812 2.2:-8309844 MS.gene043495:CDS
ACATGATGACGAAATTGAAG+TGG 0.579909 2.2:-8308693 MS.gene043495:CDS
TTCTGCAGGTGTTCCGAGAG+AGG 0.582364 2.2:-8309596 MS.gene043495:CDS
ATGTGACCCTGCATCAGACC+CGG 0.584453 2.2:+8308063 None:intergenic
TGTGAATTCTAGGTTGGACG+TGG 0.587021 2.2:-8309965 MS.gene043495:CDS
GTCTTTCTAGACAGAGGTGA+AGG 0.587573 2.2:+8308974 None:intergenic
TCATGAGATGAGGTATGGCA+TGG 0.589064 2.2:-8309020 MS.gene043495:CDS
TGAAGTGGACATTGATAGTG+TGG 0.589368 2.2:-8308678 MS.gene043495:CDS
GCTGAACGAGTCAAGCTCAT+GGG 0.590216 2.2:+8308878 None:intergenic
TGGTGTTAGAGAATGGTCAC+GGG 0.593335 2.2:-8309543 MS.gene043495:CDS
AGATGTTCATGTAATGGCGG+AGG 0.593716 2.2:-8309095 MS.gene043495:CDS
ATGGTGTTAGAGAATGGTCA+CGG 0.594200 2.2:-8309544 MS.gene043495:CDS
TGAGCGAATTGCCCAGCAGA+AGG 0.599288 2.2:-8308549 MS.gene043495:intron
GGTGAAGGTGCAGAAATCGC+GGG 0.600461 2.2:+8308989 None:intergenic
GAAGGAGAAGAGAACACCTA+AGG 0.603536 2.2:-8309503 MS.gene043495:CDS
GGAGATTAAGAGGAAGCTTG+AGG 0.608055 2.2:-8309767 MS.gene043495:CDS
CACGGTCAAAGCAAGAGATG+CGG 0.609503 2.2:-8309789 MS.gene043495:CDS
AACCTAGAATTCACAACTGG+CGG 0.610102 2.2:+8309973 None:intergenic
GAGATACAAAGATACTCGGA+GGG 0.610462 2.2:-8310183 MS.gene043495:CDS
GGCGTTGGAGAAATGGGACA+TGG 0.610803 2.2:-8309382 MS.gene043495:CDS
GGAGCTATCAGCATTATTCG+AGG 0.611908 2.2:-8309074 MS.gene043495:CDS
CACATTACAATCATGAGATG+AGG 0.614532 2.2:-8309030 MS.gene043495:CDS
TTCACAGTACCCAAGTCCAT+CGG 0.615883 2.2:+8309217 None:intergenic
CGTCCCATCAACAGTGACTG+TGG 0.618620 2.2:+8310068 None:intergenic
AGTATGAGGAACAACTTCCA+AGG 0.625080 2.2:+8310110 None:intergenic
ATCCTTCTCATGTCAAGAGG+TGG 0.625638 2.2:+8308935 None:intergenic
TTTGAGCAAATACAAGAGGA+AGG 0.629083 2.2:-8308603 MS.gene043495:CDS
TGCATCAGACCCGGACGCCG+AGG 0.630733 2.2:+8308072 None:intergenic
TCAATCCTTCTCATGTCAAG+AGG 0.631076 2.2:+8308932 None:intergenic
TTGGGTGTTTAATACTCCAG+TGG 0.632618 2.2:-8309287 MS.gene043495:CDS
AAATCACATGGAAAGAAGCA+TGG 0.633912 2.2:-8309403 MS.gene043495:CDS
TGGTGGTTTGAATGTGTCTG+TGG 0.636743 2.2:-8309674 MS.gene043495:CDS
CCTTGCACAGGCAAGGATGG+GGG 0.638520 2.2:+8308293 None:intergenic
AACAAGAAGTCAAAATCACA+TGG 0.638541 2.2:-8309415 MS.gene043495:CDS
TAAAGAGATACAAAGATACT+CGG 0.640359 2.2:-8310187 MS.gene043495:CDS
GATTCTGGCTCGTCATCAAG+TGG 0.644686 2.2:-8308215 MS.gene043495:intron
TAAGATGTGACGATAAGAAG+GGG 0.650485 2.2:-8309843 MS.gene043495:CDS
TTCTTGTTACTCTCAGCAGG+CGG 0.655387 2.2:+8309430 None:intergenic
ATGGCTGGGAGGTATGGTGG+TGG 0.655927 2.2:-8309691 MS.gene043495:CDS
GCATGAGTCTTTCTAGACAG+AGG 0.658883 2.2:+8308968 None:intergenic
CCCATCAACAGTGACTGTGG+CGG 0.662429 2.2:+8310071 None:intergenic
GGGGCCTCAACTATAACTGG+TGG 0.663312 2.2:+8308439 None:intergenic
AGCTAAGCGTGCTCACTCTG+AGG 0.664777 2.2:-8309623 MS.gene043495:CDS
GAATGGTGTTAAGAATGGAC+TGG 0.666740 2.2:-8309815 MS.gene043495:CDS
GCAAGATGTTCATGTAATGG+CGG 0.668019 2.2:-8309098 MS.gene043495:CDS
AGAGATACAAAGATACTCGG+AGG 0.670086 2.2:-8310184 MS.gene043495:CDS
AGAACCACCAGTTATAGTTG+AGG 0.671032 2.2:-8308443 MS.gene043495:CDS
ATCACCAAAGGAGTTTGCGG+AGG 0.671626 2.2:-8309167 MS.gene043495:CDS
GATTGAAGAGAAACAACGGA+TGG 0.679746 2.2:-8309710 MS.gene043495:CDS
ATAGCATCTAGTTTATCAGG+TGG 0.681272 2.2:+8308755 None:intergenic
AGGGCGACCTTGAAACGGTG+AGG 0.686080 2.2:-8309747 MS.gene043495:CDS
GAATTGGTACAAATCACCAA+AGG 0.690101 2.2:-8309179 MS.gene043495:CDS
AGTCACTGTTGATGGGACGA+AGG 0.691119 2.2:-8310064 MS.gene043495:CDS
AGAAACAACGGATGGCTGGG+AGG 0.697772 2.2:-8309702 MS.gene043495:CDS
AAGTTGATGAAACACAAGCA+CGG 0.699310 2.2:-8309310 MS.gene043495:CDS
TTAGGATTGAAGAGAAACAA+CGG 0.702409 2.2:-8309714 MS.gene043495:CDS
ACTTGGGTACTGTGAAGTCG+AGG 0.713645 2.2:-8309210 MS.gene043495:CDS
GGTGTTAGAGAATGGTCACG+GGG 0.773902 2.2:-8309542 MS.gene043495:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTGTATAACCATAAATTAT+GGG + chr2.2:8310124-8310143 None:intergenic 20.0%
!! GAGAAAAAATTTCAAAGTTT+CGG - chr2.2:8308134-8308153 MS.gene043495:intron 20.0%
!! GATCATTAAGAAACAAAATT+CGG - chr2.2:8309556-8309575 MS.gene043495:CDS 20.0%
! AAAAAATTTCAAAGTTTCGG+AGG - chr2.2:8308137-8308156 MS.gene043495:intron 25.0%
! ATTGTAATGTGACTCTATAA+TGG + chr2.2:8309243-8309262 None:intergenic 25.0%
! CCATAATTTATGGTTATACA+AGG - chr2.2:8310122-8310141 MS.gene043495:CDS 25.0%
! CCTTGTATAACCATAAATTA+TGG + chr2.2:8310125-8310144 None:intergenic 25.0%
! TAAAGAGATACAAAGATACT+CGG - chr2.2:8308095-8308114 MS.gene043495:intron 25.0%
! TATATCTGTCCCATAATTTA+TGG - chr2.2:8310112-8310131 MS.gene043495:CDS 25.0%
!!! ATCGTTATAAGGTTGATAAT+GGG - chr2.2:8308631-8308650 MS.gene043495:CDS 25.0%
AAAGTTTGAGCAAATACAAG+AGG - chr2.2:8309675-8309694 MS.gene043495:CDS 30.0%
AACAAGAAGTCAAAATCACA+TGG - chr2.2:8308867-8308886 MS.gene043495:CDS 30.0%
CCATGACATATAATCCTAAA+GGG - chr2.2:8309162-8309181 MS.gene043495:CDS 30.0%
TGTCTGATATTAATGTGCTT+TGG - chr2.2:8310166-8310185 MS.gene043495:CDS 30.0%
TTAAGATGTGACGATAAGAA+GGG - chr2.2:8308438-8308457 MS.gene043495:CDS 30.0%
TTAGGATTGAAGAGAAACAA+CGG - chr2.2:8308568-8308587 MS.gene043495:CDS 30.0%
TTCAATTTCGTCATCATGTT+GGG + chr2.2:8309588-8309607 None:intergenic 30.0%
! ACAATAGCATCTAGTTTATC+AGG + chr2.2:8309533-8309552 None:intergenic 30.0%
! GCTCAAACTTTTCTTATAGT+TGG + chr2.2:8309666-8309685 None:intergenic 30.0%
! TATGTCATGTCTCTTTTATC+CGG + chr2.2:8309467-8309486 None:intergenic 30.0%
! TTTAAGATGTGACGATAAGA+AGG - chr2.2:8308437-8308456 MS.gene043495:CDS 30.0%
!! GATCGTTATAAGGTTGATAA+TGG - chr2.2:8308630-8308649 MS.gene043495:CDS 30.0%
AAATCACATGGAAAGAAGCA+TGG - chr2.2:8308879-8308898 MS.gene043495:CDS 35.0%
AGCATTATTCGAGGAAAGAT+GGG - chr2.2:8309217-8309236 MS.gene043495:CDS 35.0%
ATTCCGAATTGGAATAGAAC+TGG + chr2.2:8308809-8308828 None:intergenic 35.0%
CAACAATAATAGTCCACAAG+CGG + chr2.2:8309892-8309911 None:intergenic 35.0%
CACATTACAATCATGAGATG+AGG - chr2.2:8309252-8309271 MS.gene043495:CDS 35.0%
CAGACATTAAAGTATAAGCG+AGG + chr2.2:8310152-8310171 None:intergenic 35.0%
CTAACACCATTACACTTAAC+TGG + chr2.2:8308728-8308747 None:intergenic 35.0%
CTTCAATTTCGTCATCATGT+TGG + chr2.2:8309589-8309608 None:intergenic 35.0%
GAACCAGTTCTATTCCAATT+CGG - chr2.2:8308803-8308822 MS.gene043495:CDS 35.0%
GAATTGGTACAAATCACCAA+AGG - chr2.2:8309103-8309122 MS.gene043495:CDS 35.0%
GCCATGACATATAATCCTAA+AGG - chr2.2:8309161-8309180 MS.gene043495:CDS 35.0%
GGAGGATAAAGTTAATTCCT+TGG - chr2.2:8308155-8308174 MS.gene043495:intron 35.0%
GGGAAATTCGAGTAGATAAT+GGG - chr2.2:8310011-8310030 MS.gene043495:CDS 35.0%
TAAGATGTGACGATAAGAAG+GGG - chr2.2:8308439-8308458 MS.gene043495:CDS 35.0%
TACAATCATGAGATGAGGTA+TGG - chr2.2:8309257-8309276 MS.gene043495:CDS 35.0%
TATTATCATCTCACATCCGA+TGG - chr2.2:8309049-8309068 MS.gene043495:CDS 35.0%
TTATCGTCACATCTTAAAGC+TGG + chr2.2:8308435-8308454 None:intergenic 35.0%
TTTGAGCAAATACAAGAGGA+AGG - chr2.2:8309679-8309698 MS.gene043495:CDS 35.0%
! ACATGATGACGAAATTGAAG+TGG - chr2.2:8309589-8309608 MS.gene043495:CDS 35.0%
! AGTGTAATGGTGTTAGAGAA+TGG - chr2.2:8308732-8308751 MS.gene043495:CDS 35.0%
! ATAGCATCTAGTTTATCAGG+TGG + chr2.2:8309530-8309549 None:intergenic 35.0%
! TCTAGCTTGAATAGCAAGTT+CGG + chr2.2:8309705-8309724 None:intergenic 35.0%
! TGTCAATTTTACCTTCTGCT+GGG + chr2.2:8309747-8309766 None:intergenic 35.0%
! TTGGAGAATGGTGTTAAGAA+TGG - chr2.2:8308462-8308481 MS.gene043495:intron 35.0%
! TTGTCAATTTTACCTTCTGC+TGG + chr2.2:8309748-8309767 None:intergenic 35.0%
!! AAGTTGATGAAACACAAGCA+CGG - chr2.2:8308972-8308991 MS.gene043495:CDS 35.0%
!! CCCTTTAGGATTATATGTCA+TGG + chr2.2:8309165-8309184 None:intergenic 35.0%
!! TATAAGGTTGATAATGGGAG+TGG - chr2.2:8308636-8308655 MS.gene043495:CDS 35.0%
AACCTAGAATTCACAACTGG+CGG + chr2.2:8308312-8308331 None:intergenic 40.0%
ACATGAACATCTTGCCCTTT+AGG + chr2.2:8309179-8309198 None:intergenic 40.0%
AGAACCACCAGTTATAGTTG+AGG - chr2.2:8309839-8309858 MS.gene043495:CDS 40.0%
AGAGATACAAAGATACTCGG+AGG - chr2.2:8308098-8308117 MS.gene043495:intron 40.0%
AGGGCAAGATGTTCATGTAA+TGG - chr2.2:8309181-8309200 MS.gene043495:CDS 40.0%
AGTATGAGGAACAACTTCCA+AGG + chr2.2:8308175-8308194 None:intergenic 40.0%
ATACCTGCTTGTCTTTCTCT+CGG + chr2.2:8309867-8309886 None:intergenic 40.0%
CAAATCACCAAAGGAGTTTG+CGG - chr2.2:8309112-8309131 MS.gene043495:CDS 40.0%
CAACTATAACTGGTGGTTCT+TGG + chr2.2:8309839-8309858 None:intergenic 40.0%
CAGCATTATTCGAGGAAAGA+TGG - chr2.2:8309216-8309235 MS.gene043495:CDS 40.0%
CTAGAAAGACTCATGCTTTC+CGG - chr2.2:8309321-8309340 MS.gene043495:CDS 40.0%
GAGAAATGGGACATGGATTT+GGG - chr2.2:8308907-8308926 MS.gene043495:CDS 40.0%
GAGATACAAAGATACTCGGA+GGG - chr2.2:8308099-8308118 MS.gene043495:intron 40.0%
GAGATTAAGAGGAAGCTTGA+GGG - chr2.2:8308516-8308535 MS.gene043495:intron 40.0%
GATTGAAGAGAAACAACGGA+TGG - chr2.2:8308572-8308591 MS.gene043495:CDS 40.0%
GCAAGATGTTCATGTAATGG+CGG - chr2.2:8309184-8309203 MS.gene043495:CDS 40.0%
GGGGAAATTCGAGTAGATAA+TGG - chr2.2:8310010-8310029 MS.gene043495:CDS 40.0%
GTTGTTCCTCATACTCATTC+TGG - chr2.2:8308180-8308199 MS.gene043495:intron 40.0%
TACACGCCAGTTAAGTGTAA+TGG - chr2.2:8308719-8308738 MS.gene043495:CDS 40.0%
TCAATCCTTCTCATGTCAAG+AGG + chr2.2:8309353-8309372 None:intergenic 40.0%
TCCAACCTAGAATTCACAAC+TGG + chr2.2:8308315-8308334 None:intergenic 40.0%
TGTGTCTGTGGATCGTTATA+AGG - chr2.2:8308620-8308639 MS.gene043495:CDS 40.0%
TTGGGTGTTTAATACTCCAG+TGG - chr2.2:8308995-8309014 MS.gene043495:CDS 40.0%
! ATGAGGTATGGCATGGATTA+TGG - chr2.2:8309269-8309288 MS.gene043495:CDS 40.0%
! ATGGTGTTAGAGAATGGTCA+CGG - chr2.2:8308738-8308757 MS.gene043495:CDS 40.0%
! GAATGGTGTTAAGAATGGAC+TGG - chr2.2:8308467-8308486 MS.gene043495:intron 40.0%
! GTAAACCTATTAGCCTCTCT+CGG + chr2.2:8308702-8308721 None:intergenic 40.0%
! TAATGTTTCTGCTCAGCAGT+TGG - chr2.2:8308251-8308270 MS.gene043495:CDS 40.0%
! TAGTCTTGATGTTGTTCAGC+TGG - chr2.2:8308386-8308405 MS.gene043495:intron 40.0%
! TCAGCAGTTGGATAGTGTTT+TGG - chr2.2:8308263-8308282 MS.gene043495:CDS 40.0%
! TGAGGTATGGCATGGATTAT+GGG - chr2.2:8309270-8309289 MS.gene043495:CDS 40.0%
! TTCTGATAGTGATAGCTCCT+CGG - chr2.2:8310193-8310212 MS.gene043495:CDS 40.0%
!! GGTTAGTGAAAGTGTTGAGA+AGG - chr2.2:8308761-8308780 MS.gene043495:CDS 40.0%
!! TGAAGTGGACATTGATAGTG+TGG - chr2.2:8309604-8309623 MS.gene043495:CDS 40.0%
!! TTAAGAATGGACTGGCTTCA+CGG - chr2.2:8308475-8308494 MS.gene043495:intron 40.0%
AAGAGAAACAACGGATGGCT+GGG - chr2.2:8308577-8308596 MS.gene043495:CDS 45.0%
AAGAGATGCGGGAGATTAAG+AGG - chr2.2:8308505-8308524 MS.gene043495:intron 45.0%
AGATGTTCATGTAATGGCGG+AGG - chr2.2:8309187-8309206 MS.gene043495:CDS 45.0%
ATCCTTCTCATGTCAAGAGG+TGG + chr2.2:8309350-8309369 None:intergenic 45.0%
ATGTGACGATAAGAAGGGGT+TGG - chr2.2:8308443-8308462 MS.gene043495:CDS 45.0%
CGCAAGCAAGAATTCCGAAT+TGG + chr2.2:8308820-8308839 None:intergenic 45.0%
GAAGGAGAAGAGAACACCTA+AGG - chr2.2:8308779-8308798 MS.gene043495:CDS 45.0%
GACTTCTTGTTACTCTCAGC+AGG + chr2.2:8308858-8308877 None:intergenic 45.0%
GAGAGAAAGACAAGCAGGTA+TGG - chr2.2:8309866-8309885 MS.gene043495:CDS 45.0%
GATAAGAAGGGGTTGGAGAA+TGG - chr2.2:8308450-8308469 MS.gene043495:CDS 45.0%
GATGAAACACAAGCACGGTT+GGG - chr2.2:8308977-8308996 MS.gene043495:CDS 45.0%
GATGTTGTTCAGCTGGAAGA+TGG - chr2.2:8308393-8308412 MS.gene043495:intron 45.0%
GCATGAGTCTTTCTAGACAG+AGG + chr2.2:8309317-8309336 None:intergenic 45.0%
GCCAGTTGTGAATTCTAGGT+TGG - chr2.2:8308311-8308330 MS.gene043495:intron 45.0%
GGAGAAATGGGACATGGATT+TGG - chr2.2:8308906-8308925 MS.gene043495:CDS 45.0%
GGAGATTAAGAGGAAGCTTG+AGG - chr2.2:8308515-8308534 MS.gene043495:intron 45.0%
GGAGCTATCAGCATTATTCG+AGG - chr2.2:8309208-8309227 MS.gene043495:CDS 45.0%
GGGGACTGTAGTTGAAGATA+AGG - chr2.2:8308068-8308087 MS.gene043495:CDS 45.0%
GTAGCACCAGAATGAGTATG+AGG + chr2.2:8308189-8308208 None:intergenic 45.0%
GTCGAGTTTGTATCGTAAGC+AGG - chr2.2:8308353-8308372 MS.gene043495:intron 45.0%
GTCTTTCTAGACAGAGGTGA+AGG + chr2.2:8309311-8309330 None:intergenic 45.0%
TACCTGCTTGTCTTTCTCTC+GGG + chr2.2:8309866-8309885 None:intergenic 45.0%
TCATGAGATGAGGTATGGCA+TGG - chr2.2:8309262-8309281 MS.gene043495:CDS 45.0%
TGATGAAACACAAGCACGGT+TGG - chr2.2:8308976-8308995 MS.gene043495:CDS 45.0%
TGGTGGTTTGAATGTGTCTG+TGG - chr2.2:8308608-8308627 MS.gene043495:CDS 45.0%
TGTGGATGCAGAGACTCTTT+GGG - chr2.2:8309622-8309641 MS.gene043495:CDS 45.0%
TTATCCGGATCGTTTGCCTT+CGG + chr2.2:8309452-8309471 None:intergenic 45.0%
TTCACAGTACCCAAGTCCAT+CGG + chr2.2:8309068-8309087 None:intergenic 45.0%
TTCTTGTTACTCTCAGCAGG+CGG + chr2.2:8308855-8308874 None:intergenic 45.0%
TTGATGGGACGAAGGATAAC+GGG - chr2.2:8308226-8308245 MS.gene043495:CDS 45.0%
! AAGCATGGCGTTGGAGAAAT+GGG - chr2.2:8308894-8308913 MS.gene043495:CDS 45.0%
! ATCTCACATCCGATGGACTT+GGG - chr2.2:8309056-8309075 MS.gene043495:CDS 45.0%
! GTTGATGGGACGAAGGATAA+CGG - chr2.2:8308225-8308244 MS.gene043495:CDS 45.0%
! TGGTGTTAGAGAATGGTCAC+GGG - chr2.2:8308739-8308758 MS.gene043495:CDS 45.0%
! TGTGAATTCTAGGTTGGACG+TGG - chr2.2:8308317-8308336 MS.gene043495:intron 45.0%
!! GAATAGAACTGGTTCGCCTT+AGG + chr2.2:8308798-8308817 None:intergenic 45.0%
!!! GTTGGATAGTGTTTTGGCTC+CGG - chr2.2:8308269-8308288 MS.gene043495:CDS 45.0%
!!! TCGTTTGCCTTCGGCTTTTT+TGG + chr2.2:8309443-8309462 None:intergenic 45.0%
AAAGCCGAAGGCAAACGATC+CGG - chr2.2:8309445-8309464 MS.gene043495:CDS 50.0%
AATTTCCCCTTGCACAGGCA+AGG + chr2.2:8309999-8310018 None:intergenic 50.0%
ACATCCTCCGCAAACTCCTT+TGG + chr2.2:8309122-8309141 None:intergenic 50.0%
ACCTGCTTGTCTTTCTCTCG+GGG + chr2.2:8309865-8309884 None:intergenic 50.0%
ACGGTCAAAGCAAGAGATGC+GGG - chr2.2:8308494-8308513 MS.gene043495:intron 50.0%
ACTCGAATTTCCCCTTGCAC+AGG + chr2.2:8310004-8310023 None:intergenic 50.0%
AGCAGCTCAAGCAGTGATTC+TGG - chr2.2:8310052-8310071 MS.gene043495:CDS 50.0%
AGCTGAACGAGTCAAGCTCA+TGG + chr2.2:8309408-8309427 None:intergenic 50.0%
AGTCGAGGCTGAGCAAGAAT+TGG - chr2.2:8309087-8309106 MS.gene043495:CDS 50.0%
ATCACCAAAGGAGTTTGCGG+AGG - chr2.2:8309115-8309134 MS.gene043495:CDS 50.0%
CACCACCTCTTGACATGAGA+AGG - chr2.2:8309345-8309364 MS.gene043495:CDS 50.0%
CACGGTCAAAGCAAGAGATG+CGG - chr2.2:8308493-8308512 MS.gene043495:intron 50.0%
CCAAAGACCTCACCGTTTCA+AGG + chr2.2:8308545-8308564 None:intergenic 50.0%
CCAAGACGTTCAACATCCAC+TGG + chr2.2:8309014-8309033 None:intergenic 50.0%
CCAGTGGATGTTGAACGTCT+TGG - chr2.2:8309011-8309030 MS.gene043495:CDS 50.0%
CCTTGAAACGGTGAGGTCTT+TGG - chr2.2:8308542-8308561 MS.gene043495:intron 50.0%
CGAGTCAAGCTCATGGGATT+TGG + chr2.2:8309401-8309420 None:intergenic 50.0%
CTCCGCCAGTTGTGAATTCT+AGG - chr2.2:8308307-8308326 MS.gene043495:CDS 50.0%
CTTCTCATGTCAAGAGGTGG+TGG + chr2.2:8309347-8309366 None:intergenic 50.0%
GAAGAGAAACAACGGATGGC+TGG - chr2.2:8308576-8308595 MS.gene043495:CDS 50.0%
GCTGAACGAGTCAAGCTCAT+GGG + chr2.2:8309407-8309426 None:intergenic 50.0%
GGTGTTAGAGAATGGTCACG+GGG - chr2.2:8308740-8308759 MS.gene043495:CDS 50.0%
GTCAAGCTCATGGGATTTGG+AGG + chr2.2:8309398-8309417 None:intergenic 50.0%
GTGTGGATGCAGAGACTCTT+TGG - chr2.2:8309621-8309640 MS.gene043495:CDS 50.0%
GTGTTCCGAGAGAGGCTAAT+AGG - chr2.2:8308694-8308713 MS.gene043495:CDS 50.0%
TCCTGCTCCAAAAAAGCCGA+AGG - chr2.2:8309433-8309452 MS.gene043495:CDS 50.0%
! ACTTGGGTACTGTGAAGTCG+AGG - chr2.2:8309072-8309091 MS.gene043495:CDS 50.0%
! AGGTGAAGGTGCAGAAATCG+CGG + chr2.2:8309297-8309316 None:intergenic 50.0%
! AGTCACTGTTGATGGGACGA+AGG - chr2.2:8308218-8308237 MS.gene043495:CDS 50.0%
! CATCTCACATCCGATGGACT+TGG - chr2.2:8309055-8309074 MS.gene043495:CDS 50.0%
! CATGGAAAGAAGCATGGCGT+TGG - chr2.2:8308885-8308904 MS.gene043495:CDS 50.0%
! CGGTGAGGTCTTTGGTGATT+AGG - chr2.2:8308550-8308569 MS.gene043495:CDS 50.0%
! GAAGCATGGCGTTGGAGAAA+TGG - chr2.2:8308893-8308912 MS.gene043495:CDS 50.0%
!! GATTCTGGCTCGTCATCAAG+TGG - chr2.2:8310067-8310086 MS.gene043495:CDS 50.0%
!! TCTTGGCTCTACAGGAAGCA+TGG + chr2.2:8309822-8309841 None:intergenic 50.0%
ACCGCCACAGTCACTGTTGA+TGG - chr2.2:8308210-8308229 MS.gene043495:intron 55.0%
AGAAACAACGGATGGCTGGG+AGG - chr2.2:8308580-8308599 MS.gene043495:CDS 55.0%
AGCTAAGCGTGCTCACTCTG+AGG - chr2.2:8308659-8308678 MS.gene043495:CDS 55.0%
ATCAACAGTGACTGTGGCGG+TGG + chr2.2:8308211-8308230 None:intergenic 55.0%
ATGTGACCCTGCATCAGACC+CGG + chr2.2:8310222-8310241 None:intergenic 55.0%
CCCATCAACAGTGACTGTGG+CGG + chr2.2:8308214-8308233 None:intergenic 55.0%
CCGCCACAGTCACTGTTGAT+GGG - chr2.2:8308211-8308230 MS.gene043495:intron 55.0%
CGTCCCATCAACAGTGACTG+TGG + chr2.2:8308217-8308236 None:intergenic 55.0%
CTCGGGGCCTCAACTATAAC+TGG + chr2.2:8309849-8309868 None:intergenic 55.0%
GCTTGAGGGCGACCTTGAAA+CGG - chr2.2:8308530-8308549 MS.gene043495:intron 55.0%
GGGGCCTCAACTATAACTGG+TGG + chr2.2:8309846-8309865 None:intergenic 55.0%
TGAGCGAATTGCCCAGCAGA+AGG - chr2.2:8309733-8309752 MS.gene043495:CDS 55.0%
TTCTGCAGGTGTTCCGAGAG+AGG - chr2.2:8308686-8308705 MS.gene043495:CDS 55.0%
! GGCGTTGGAGAAATGGGACA+TGG - chr2.2:8308900-8308919 MS.gene043495:CDS 55.0%
! GGTGAAGGTGCAGAAATCGC+GGG + chr2.2:8309296-8309315 None:intergenic 55.0%
! TCATGTCAAGAGGTGGTGGC+CGG + chr2.2:8309343-8309362 None:intergenic 55.0%
!! CACTCTGAGGTAGCTTCTGC+AGG - chr2.2:8308672-8308691 MS.gene043495:CDS 55.0%
!! CTGGTGGTTCTTGGCTCTAC+AGG + chr2.2:8309830-8309849 None:intergenic 55.0%
!!! AGTGTTTTGGCTCCGGAGGA+TGG - chr2.2:8308276-8308295 MS.gene043495:CDS 55.0%
!!! GCCTTCGGCTTTTTTGGAGC+AGG + chr2.2:8309437-8309456 None:intergenic 55.0%
!!! GGATAGTGTTTTGGCTCCGG+AGG - chr2.2:8308272-8308291 MS.gene043495:CDS 55.0%
!!! GTGTTTTGGCTCCGGAGGAT+GGG - chr2.2:8308277-8308296 MS.gene043495:CDS 55.0%
AGGGCGACCTTGAAACGGTG+AGG - chr2.2:8308535-8308554 MS.gene043495:intron 60.0%
AGTGATAGCTCCTCGGCGTC+CGG - chr2.2:8310200-8310219 MS.gene043495:CDS 60.0%
CAACGGATGGCTGGGAGGTA+TGG - chr2.2:8308585-8308604 MS.gene043495:CDS 60.0%
CAAGCAGGTATGGCCGCTTG+TGG - chr2.2:8309876-8309895 MS.gene043495:CDS 60.0%
CCCATCCTTGCCTGTGCAAG+GGG - chr2.2:8309991-8310010 MS.gene043495:CDS 60.0%
CCCCATCCTTGCCTGTGCAA+GGG - chr2.2:8309990-8310009 MS.gene043495:CDS 60.0%
CCCCTTGCACAGGCAAGGAT+GGG + chr2.2:8309994-8310013 None:intergenic 60.0%
CCCTTGCACAGGCAAGGATG+GGG + chr2.2:8309993-8310012 None:intergenic 60.0%
CCTTGCACAGGCAAGGATGG+GGG + chr2.2:8309992-8310011 None:intergenic 60.0%
GCCCCGAGAGAAAGACAAGC+AGG - chr2.2:8309861-8309880 MS.gene043495:CDS 60.0%
GGAGCCGAATTCCCATCCTC+CGG + chr2.2:8308291-8308310 None:intergenic 60.0%
GGCTCCGGAGGATGGGAATT+CGG - chr2.2:8308284-8308303 MS.gene043495:CDS 60.0%
TCCCCTTGCACAGGCAAGGA+TGG + chr2.2:8309995-8310014 None:intergenic 60.0%
! ATGGCTGGGAGGTATGGTGG+TGG - chr2.2:8308591-8308610 MS.gene043495:CDS 60.0%
CCCCCATCCTTGCCTGTGCA+AGG - chr2.2:8309989-8310008 MS.gene043495:CDS 65.0%
GTGATAGCTCCTCGGCGTCC+GGG - chr2.2:8310201-8310220 MS.gene043495:CDS 65.0%
! CGGATGGCTGGGAGGTATGG+TGG - chr2.2:8308588-8308607 MS.gene043495:CDS 65.0%
CGGCGTCCGGGTCTGATGCA+GGG - chr2.2:8310213-8310232 MS.gene043495:CDS 70.0%
TCGGCGTCCGGGTCTGATGC+AGG - chr2.2:8310212-8310231 MS.gene043495:CDS 70.0%
TGCATCAGACCCGGACGCCG+AGG + chr2.2:8310213-8310232 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 8308060 8310244 8308060 ID=MS.gene043495
chr2.2 mRNA 8308060 8310244 8308060 ID=MS.gene043495.t1;Parent=MS.gene043495
chr2.2 exon 8308550 8310244 8308550 ID=MS.gene043495.t1.exon1;Parent=MS.gene043495.t1
chr2.2 CDS 8308550 8310244 8308550 ID=cds.MS.gene043495.t1;Parent=MS.gene043495.t1
chr2.2 exon 8308422 8308470 8308422 ID=MS.gene043495.t1.exon2;Parent=MS.gene043495.t1
chr2.2 CDS 8308422 8308470 8308422 ID=cds.MS.gene043495.t1;Parent=MS.gene043495.t1
chr2.2 exon 8308216 8308329 8308216 ID=MS.gene043495.t1.exon3;Parent=MS.gene043495.t1
chr2.2 CDS 8308216 8308329 8308216 ID=cds.MS.gene043495.t1;Parent=MS.gene043495.t1
chr2.2 exon 8308060 8308112 8308060 ID=MS.gene043495.t1.exon4;Parent=MS.gene043495.t1
chr2.2 CDS 8308060 8308112 8308060 ID=cds.MS.gene043495.t1;Parent=MS.gene043495.t1
Gene Sequence

>MS.gene043495

ATGGATTCGGGGACTGTAGTTGAAGATAAGGTAGTTAAAGAGATACAAAGATACTCGGAGGGAAAAGTATACACGAGAAAAAATTTCAAAGTTTCGGAGGATAAAGTTAATTCCTTGGAAGTTGTTCCTCATACTCATTCTGGTGCTACCACCGCCACAGTCACTGTTGATGGGACGAAGGATAACGGGAATAATGTTTCTGCTCAGCAGTTGGATAGTGTTTTGGCTCCGGAGGATGGGAATTCGGCTCCGCCAGTTGTGAATTCTAGGTTGGACGTGGTTTCTGAAGATTCGTCGAGTTTGTATCGTAAGCAGGATGAGCATTTTAGTCTTGATGTTGTTCAGCTGGAAGATGGTAATGATTCGTTAGAACCAGCTTTAAGATGTGACGATAAGAAGGGGTTGGAGAATGGTGTTAAGAATGGACTGGCTTCACGGTCAAAGCAAGAGATGCGGGAGATTAAGAGGAAGCTTGAGGGCGACCTTGAAACGGTGAGGTCTTTGGTGATTAGGATTGAAGAGAAACAACGGATGGCTGGGAGGTATGGTGGTGGTTTGAATGTGTCTGTGGATCGTTATAAGGTTGATAATGGGAGTGGAGCTAAGCGTGCTCACTCTGAGGTAGCTTCTGCAGGTGTTCCGAGAGAGGCTAATAGGTTTACACGCCAGTTAAGTGTAATGGTGTTAGAGAATGGTCACGGGGTTAGTGAAAGTGTTGAGAAGGAGAAGAGAACACCTAAGGCGAACCAGTTCTATTCCAATTCGGAATTCTTGCTTGCGAAAGATAAGTTTCCGCCTGCTGAGAGTAACAAGAAGTCAAAATCACATGGAAAGAAGCATGGCGTTGGAGAAATGGGACATGGATTTGGGATAGTATCGAAGTATTTTAAGAACTGTAGCTCATTGCTTGAAAAGTTGATGAAACACAAGCACGGTTGGGTGTTTAATACTCCAGTGGATGTTGAACGTCTTGGTTTGCATGATTATTTTATTATCATCTCACATCCGATGGACTTGGGTACTGTGAAGTCGAGGCTGAGCAAGAATTGGTACAAATCACCAAAGGAGTTTGCGGAGGATGTGAGACTTACTTTTCGTAATGCCATGACATATAATCCTAAAGGGCAAGATGTTCATGTAATGGCGGAGGAGCTATCAGCATTATTCGAGGAAAGATGGGCCATTATAGAGTCACATTACAATCATGAGATGAGGTATGGCATGGATTATGGGCCCGCGATTTCTGCACCTTCACCTCTGTCTAGAAAGACTCATGCTTTCCGGCCACCACCTCTTGACATGAGAAGGATTGATAGATCAGATTCAATTACAAAACCTCCAAATCCCATGAGCTTGACTCGTTCAGCTCGAACTCCTGCTCCAAAAAAGCCGAAGGCAAACGATCCGGATAAAAGAGACATGACATACTATGAAAAGCAAAAACTTAGCACACATCTTCAGAATCTACCACCTGATAAACTAGATGCTATTGTACAGATCATTAAGAAACAAAATTCGGCACTTTCCCAACATGATGACGAAATTGAAGTGGACATTGATAGTGTGGATGCAGAGACTCTTTGGGAGCTTGATAGATATGTTACCAACTATAAGAAAAGTTTGAGCAAATACAAGAGGAAGGCCGAACTTGCTATTCAAGCTAGAGCAGAAGCTGAGCGAATTGCCCAGCAGAAGGTAAAATTGACAATTTCAAAGTTTAATCTTCTTTTGCAAATACTTGTTACTAATTGAATTTATTCCATGCTTCCTGTAGAGCCAAGAACCACCAGTTATAGTTGAGGCCCCGAGAGAAAGACAAGCAGGTATGGCCGCTTGTGGACTATTATTGTTGATCTCTTTTCATCATTCATCAATTAAATTAATTGAAATATTTTGTCTGCTTGTTTCTGAGCAGATGAAAGAAATGATCCCCCATCCTTGCCTGTGCAAGGGGAAATTCGAGTAGATAATGGGAGTAAGACAAGTAGTTCAAGCAGCTCAAGCAGTGATTCTGGCTCGTCATCAAGTGGTATATTAAATAATTATTTAATATATATCTGTCCCATAATTTATGGTTATACAAGGTCAACCTCGCTTATACTTTAATGTCTGATATTAATGTGCTTTGGCAGATTCTGATAGTGATAGCTCCTCGGCGTCCGGGTCTGATGCAGGGTCACATTGA
Protein sequence

>MS.gene043495.t1

MDSGTVVEDKVVKEIQRYSEGKVYTRKNFKVSEDKVNSLEVVPHTHSGATTATVTVDGTKDNGNNVSAQQLDSVLAPEDGNSAPPVVNSRLDVVSEDSSSLYRKQDEHFSLDVVQLEDGNDSLEPALRCDDKKGLENGVKNGLASRSKQEMREIKRKLEGDLETVRSLVIRIEEKQRMAGRYGGGLNVSVDRYKVDNGSGAKRAHSEVASAGVPREANRFTRQLSVMVLENGHGVSESVEKEKRTPKANQFYSNSEFLLAKDKFPPAESNKKSKSHGKKHGVGEMGHGFGIVSKYFKNCSSLLEKLMKHKHGWVFNTPVDVERLGLHDYFIIISHPMDLGTVKSRLSKNWYKSPKEFAEDVRLTFRNAMTYNPKGQDVHVMAEELSALFEERWAIIESHYNHEMRYGMDYGPAISAPSPLSRKTHAFRPPPLDMRRIDRSDSITKPPNPMSLTRSARTPAPKKPKANDPDKRDMTYYEKQKLSTHLQNLPPDKLDAIVQIIKKQNSALSQHDDEIEVDIDSVDAETLWELDRYVTNYKKSLSKYKRKAELAIQARAEAERIAQQKSQEPPVIVEAPRERQADERNDPPSLPVQGEIRVDNGSKTSSSSSSSSDSGSSSSDSDSDSSSASGSDAGSH