Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043784.t1 | XP_013464042.1 | 84 | 595 | 74 | 4 | 3 | 596 | 2 | 576 | 6.80E-234 | 820.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043784.t1 | Q56X72 | 56.9 | 267 | 112 | 2 | 289 | 554 | 173 | 437 | 7.4e-80 | 299.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043784.t1 | A0A072V8B4 | 84.0 | 595 | 74 | 4 | 3 | 596 | 2 | 576 | 4.9e-234 | 820.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene043784 | MS.gene36496 | PPI |
| MS.gene043784 | MS.gene35163 | PPI |
| MS.gene043784 | MS.gene028296 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043784.t1 | MTR_2g460800 | 91.765 | 595 | 28 | 4 | 3 | 596 | 2 | 576 | 0.0 | 1047 |
| MS.gene043784.t1 | MTR_2g460800 | 90.457 | 503 | 27 | 4 | 3 | 504 | 2 | 484 | 0.0 | 845 |
| MS.gene043784.t1 | MTR_2g090620 | 34.866 | 261 | 154 | 5 | 332 | 579 | 112 | 369 | 5.61e-46 | 167 |
| MS.gene043784.t1 | MTR_4g078740 | 37.097 | 248 | 150 | 4 | 311 | 556 | 25 | 268 | 1.86e-44 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043784.t1 | AT5G58000 | 40.641 | 593 | 250 | 21 | 7 | 559 | 17 | 547 | 1.45e-109 | 341 |
| MS.gene043784.t1 | AT5G58000 | 56.934 | 274 | 110 | 5 | 289 | 559 | 173 | 441 | 7.66e-107 | 330 |
| MS.gene043784.t1 | AT2G20590 | 36.782 | 261 | 156 | 3 | 304 | 559 | 122 | 378 | 5.02e-44 | 162 |
| MS.gene043784.t1 | AT2G20590 | 37.229 | 231 | 143 | 2 | 330 | 559 | 136 | 365 | 1.22e-43 | 161 |
| MS.gene043784.t1 | AT4G28430 | 39.070 | 215 | 129 | 2 | 346 | 559 | 193 | 406 | 5.86e-39 | 149 |
| MS.gene043784.t1 | AT2G20590 | 38.202 | 178 | 104 | 2 | 327 | 499 | 142 | 318 | 3.34e-30 | 121 |
Find 111 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGGGTTTGGAGAAATTT+TGG | 0.157130 | 2.1:-40030474 | None:intergenic |
| CTAGACTCTGCAACTTGTTT+TGG | 0.174874 | 2.1:-40030642 | None:intergenic |
| TGAAAATTTCTTACTTGAAT+TGG | 0.195478 | 2.1:-40030491 | None:intergenic |
| TTTCCTTTGGAAATCTGAAT+TGG | 0.240670 | 2.1:-40029710 | None:intergenic |
| CTTATCTTTCTTGATTGAAT+TGG | 0.242851 | 2.1:-40029794 | None:intergenic |
| AGTACTATTTCAGGCTTCTT+TGG | 0.243221 | 2.1:+40031815 | MS.gene043784:intron |
| CTACTGCGTTCTTCTTCTTT+TGG | 0.250422 | 2.1:-40030607 | None:intergenic |
| TTATTATTACCTGCAAATTA+AGG | 0.251225 | 2.1:-40031147 | None:intergenic |
| GTGGAAGTTTCATAACTATT+TGG | 0.254654 | 2.1:+40031676 | MS.gene043784:CDS |
| TTGTGTTGTTTCTGTCTAAC+TGG | 0.259168 | 2.1:-40034108 | None:intergenic |
| TTTCTTCTGTTCTGCTTCAT+TGG | 0.263708 | 2.1:-40030314 | None:intergenic |
| TCTATAGATCCTTAATTTGC+AGG | 0.277885 | 2.1:+40031138 | MS.gene043784:CDS |
| GACAAGAATTCATTCAAATA+AGG | 0.278389 | 2.1:-40031495 | None:intergenic |
| ATGAAGAGTGATCAAGTTAA+AGG | 0.286954 | 2.1:+40029575 | MS.gene043784:CDS |
| TAAGAGAACAAGATGCAATT+TGG | 0.296512 | 2.1:+40031454 | MS.gene043784:CDS |
| TCAGCATTTGTGTTTGGAAT+TGG | 0.312327 | 2.1:+40030785 | MS.gene043784:CDS |
| TTATCTTTCTTGATTGAATT+GGG | 0.312571 | 2.1:-40029793 | None:intergenic |
| AAAGAATGAATTTGATGAAT+TGG | 0.314502 | 2.1:+40029958 | MS.gene043784:CDS |
| TTTCTTCGGTTCTGCTTCAT+TGG | 0.314912 | 2.1:-40030344 | None:intergenic |
| TCATTAACATTCTTATTGAT+TGG | 0.318213 | 2.1:-40029878 | None:intergenic |
| TGAATCAACAAGAAAATGAT+AGG | 0.319395 | 2.1:+40030230 | MS.gene043784:CDS |
| CATCTGTTGTTGCTCGCATT+TGG | 0.323883 | 2.1:+40033878 | MS.gene043784:CDS |
| ATGAAATGGAAGACTCTTCT+TGG | 0.325297 | 2.1:-40029762 | None:intergenic |
| TGCAATTTGGATGCTGAAAT+TGG | 0.325517 | 2.1:+40031467 | MS.gene043784:CDS |
| GAAAATTTCTTACTTGAATT+GGG | 0.330039 | 2.1:-40030490 | None:intergenic |
| TTTCTTACTTGAATTGGGTT+TGG | 0.336832 | 2.1:-40030485 | None:intergenic |
| GAATCCTTTCTTGACTTTGT+TGG | 0.339840 | 2.1:-40034142 | None:intergenic |
| CCAACATGAACCACTGATTC+AGG | 0.347212 | 2.1:-40030088 | None:intergenic |
| ATACTATCAACAACACTATA+TGG | 0.360600 | 2.1:+40034029 | MS.gene043784:CDS |
| TAGGCATATTCGGTCTAGTA+TGG | 0.366112 | 2.1:+40033848 | MS.gene043784:CDS |
| ACTACAAGAGGAACAGAAAC+TGG | 0.385936 | 2.1:-40030412 | None:intergenic |
| TTGGCATTCACCACTTTCTT+CGG | 0.387650 | 2.1:-40030358 | None:intergenic |
| ATCTGTTGTTGCTCGCATTT+GGG | 0.390664 | 2.1:+40033879 | MS.gene043784:CDS |
| AGATTGAGAAGAACCTCAAT+TGG | 0.400011 | 2.1:+40029662 | MS.gene043784:CDS |
| TCAAGATCAGCATTTGTGTT+TGG | 0.401200 | 2.1:+40030779 | MS.gene043784:CDS |
| TTCCTTTGGAAATCTGAATT+GGG | 0.411037 | 2.1:-40029709 | None:intergenic |
| TTTCATAACTATTTGGAAGA+TGG | 0.416263 | 2.1:+40031683 | MS.gene043784:CDS |
| GAATTTGATGAATTGGATGA+TGG | 0.435863 | 2.1:+40029965 | MS.gene043784:CDS |
| GAAGAAGGAGGAGGAAATGT+TGG | 0.436336 | 2.1:+40029632 | MS.gene043784:CDS |
| GAATACGAAGAGCAGATCTT+TGG | 0.436812 | 2.1:-40031851 | None:intergenic |
| AGAAGAGGTGTGGTTGCTGC+AGG | 0.437201 | 2.1:+40029533 | MS.gene043784:CDS |
| TTGATTCACAGTAACAACTT+TGG | 0.439920 | 2.1:-40030215 | None:intergenic |
| GCTGTGGCTCTAGGCATATT+CGG | 0.445263 | 2.1:+40033838 | MS.gene043784:CDS |
| ATTGGGCTTCTTGTATGAAA+TGG | 0.447927 | 2.1:-40029776 | None:intergenic |
| TTTGTGATGAAATCTCATAT+TGG | 0.448436 | 2.1:-40030377 | None:intergenic |
| AAGGGTGGTGGTGAAGCTGC+AGG | 0.452129 | 2.1:+40029830 | MS.gene043784:CDS |
| ATTACCTTCATTGTGGTGCC+AGG | 0.452683 | 2.1:-40031546 | None:intergenic |
| TCAGCACAATTAACTGCATA+TGG | 0.452909 | 2.1:+40031872 | MS.gene043784:CDS |
| GTAACAACTTTGGATTCTGC+TGG | 0.465322 | 2.1:-40030205 | None:intergenic |
| ATTTCTGCAATGTCCTATGT+AGG | 0.468181 | 2.1:+40031089 | MS.gene043784:CDS |
| ATTTGGAAGATGGCTAAAAT+CGG | 0.474250 | 2.1:+40031693 | MS.gene043784:CDS |
| TCGTCGATTCCGGGATGCAT+GGG | 0.478641 | 2.1:+40033795 | MS.gene043784:CDS |
| GTTGTTGCTCGCATTTGGGC+AGG | 0.478972 | 2.1:+40033883 | MS.gene043784:CDS |
| TTAATGATTCAATTGAATTG+AGG | 0.479489 | 2.1:+40029894 | MS.gene043784:CDS |
| GAATGGGTGGAAGATGAAAC+AGG | 0.491736 | 2.1:+40034060 | MS.gene043784:CDS |
| ACTATATGGTGAGGGATGAA+TGG | 0.492619 | 2.1:+40034043 | MS.gene043784:CDS |
| TTCGTCGATTCCGGGATGCA+TGG | 0.499984 | 2.1:+40033794 | MS.gene043784:CDS |
| AACAATCCCCTACAATCAAA+AGG | 0.507778 | 2.1:+40030437 | MS.gene043784:CDS |
| ATGCAAAGGATATCAATTTG+AGG | 0.510644 | 2.1:+40030834 | MS.gene043784:CDS |
| GTGAAGCTGCAGGGAAATTG+AGG | 0.515270 | 2.1:+40029840 | MS.gene043784:CDS |
| TGCAAATTAAGGATCTATAG+AGG | 0.521117 | 2.1:-40031136 | None:intergenic |
| GATTGAGAAGAACCTCAATT+GGG | 0.529558 | 2.1:+40029663 | MS.gene043784:CDS |
| CTATATGGTGAGGGATGAAT+GGG | 0.530924 | 2.1:+40034044 | MS.gene043784:CDS |
| AAGATAGACAAGGCCTACAT+AGG | 0.541659 | 2.1:-40031102 | None:intergenic |
| AATTTGATGAATTGGATGAT+GGG | 0.543422 | 2.1:+40029966 | MS.gene043784:CDS |
| GAAGGAGGAGGAAATGTTGG+TGG | 0.543510 | 2.1:+40029635 | MS.gene043784:CDS |
| GGGGATTGTTTCACTACAAG+AGG | 0.543889 | 2.1:-40030424 | None:intergenic |
| TCAAAATTCACCTGAATCAG+TGG | 0.544044 | 2.1:+40030078 | MS.gene043784:CDS |
| GCTACCAACAAAGTCAAGAA+AGG | 0.545347 | 2.1:+40034138 | MS.gene043784:CDS |
| AGCCCAATTCAGATTTCCAA+AGG | 0.554864 | 2.1:+40029707 | MS.gene043784:CDS |
| TTCTTGAACTCGATCCAACT+CGG | 0.555375 | 2.1:-40029927 | None:intergenic |
| TACTTAAATTACCTTCATTG+TGG | 0.555434 | 2.1:-40031553 | None:intergenic |
| AGATCCTGGCACCACAATGA+AGG | 0.555506 | 2.1:+40031542 | MS.gene043784:CDS |
| GAATGAAAGCTTTGATGTGA+AGG | 0.555982 | 2.1:+40030171 | MS.gene043784:CDS |
| GATAAGATCTGATATGCAGA+AGG | 0.555989 | 2.1:+40029811 | MS.gene043784:CDS |
| CAAAACAAGTTGCAGAGTCT+AGG | 0.557021 | 2.1:+40030643 | MS.gene043784:CDS |
| TGGTTGCTGCAGGGTCAGTG+TGG | 0.558063 | 2.1:+40029543 | MS.gene043784:CDS |
| TTGGTTCCATCAGAAATGCA+TGG | 0.559390 | 2.1:-40029743 | None:intergenic |
| AGTCTCATCTTCTTATGCAA+AGG | 0.559905 | 2.1:+40030820 | MS.gene043784:CDS |
| TCTCTTTGAAGACCCAATTG+AGG | 0.560301 | 2.1:-40029675 | None:intergenic |
| TGAAGCAGAACCGAAGAAAG+TGG | 0.562780 | 2.1:+40030348 | MS.gene043784:CDS |
| TGCATGAATCCCATGCATCC+CGG | 0.564871 | 2.1:-40033804 | None:intergenic |
| GAGGAACCATGCATTTCTGA+TGG | 0.565807 | 2.1:+40029737 | MS.gene043784:CDS |
| TGAAGCAGAACAGAAGAAAG+TGG | 0.569576 | 2.1:+40030318 | MS.gene043784:CDS |
| TGAGAAAGATGAAAATGTTG+AGG | 0.571155 | 2.1:+40030006 | MS.gene043784:CDS |
| AAGAGTGATCAAGTTAAAGG+TGG | 0.572772 | 2.1:+40029578 | MS.gene043784:CDS |
| GAGGAAGACGAAATCCGAGT+TGG | 0.576151 | 2.1:+40029913 | MS.gene043784:CDS |
| TGAGGAAATTGAAATTGAGA+TGG | 0.583763 | 2.1:+40030147 | MS.gene043784:CDS |
| TGGTGAGGTTGAAGATGATG+AGG | 0.590184 | 2.1:+40030129 | MS.gene043784:CDS |
| AGAATTCATTCAAATAAGGT+AGG | 0.591737 | 2.1:-40031491 | None:intergenic |
| GGTTGCTGCAGGGTCAGTGT+GGG | 0.592884 | 2.1:+40029544 | MS.gene043784:CDS |
| CAACAGTGGATTTAATAATG+TGG | 0.598108 | 2.1:+40030747 | MS.gene043784:intron |
| CCTGAATCAGTGGTTCATGT+TGG | 0.600898 | 2.1:+40030088 | MS.gene043784:CDS |
| AAACAGGATGTGATGAAGCA+TGG | 0.601103 | 2.1:+40034076 | MS.gene043784:CDS |
| TATGGTGAGGGATGAATGGG+TGG | 0.602229 | 2.1:+40034047 | MS.gene043784:CDS |
| GAATCAGTGGTTCATGTTGG+TGG | 0.602680 | 2.1:+40030091 | MS.gene043784:CDS |
| ATCAACAACACTATATGGTG+AGG | 0.602777 | 2.1:+40034034 | MS.gene043784:CDS |
| GATATCAAGCAATGTTGATG+TGG | 0.605869 | 2.1:+40030054 | MS.gene043784:CDS |
| TCAATGGATAATAAAAGAAG+AGG | 0.607494 | 2.1:+40029518 | None:intergenic |
| AACAGGATGTGATGAAGCAT+GGG | 0.612508 | 2.1:+40034077 | MS.gene043784:CDS |
| GAATCAACAAGAAAATGATA+GGG | 0.618015 | 2.1:+40030231 | MS.gene043784:CDS |
| TCTGATATGCAGAAGGGTGG+TGG | 0.626002 | 2.1:+40029818 | MS.gene043784:CDS |
| GAAGAGGTGTGGTTGCTGCA+GGG | 0.627693 | 2.1:+40029534 | MS.gene043784:CDS |
| GGATAATAAAAGAAGAGGTG+TGG | 0.630363 | 2.1:+40029523 | MS.gene043784:CDS |
| AGGGTGGTGGTGAAGCTGCA+GGG | 0.632751 | 2.1:+40029831 | MS.gene043784:CDS |
| AGATCTGATATGCAGAAGGG+TGG | 0.640604 | 2.1:+40029815 | MS.gene043784:CDS |
| TCAACAACACTATATGGTGA+GGG | 0.642871 | 2.1:+40034035 | MS.gene043784:CDS |
| GGTGGTGATTCTGAATCAGA+TGG | 0.664264 | 2.1:+40030109 | MS.gene043784:CDS |
| TGATTCTGAATCAGATGGTG+AGG | 0.669622 | 2.1:+40030114 | MS.gene043784:CDS |
| ATAAGATCTGATATGCAGAA+GGG | 0.678384 | 2.1:+40029812 | MS.gene043784:CDS |
| AGATAACTGCAAGATAGACA+AGG | 0.714341 | 2.1:-40031112 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAATATATAAATAAAG+GGG | + | chr2.1:40032582-40032601 | MS.gene043784:intron | 10.0% |
| !!! | TATTTTGAAAATGATTATAT+AGG | + | chr2.1:40033610-40033629 | MS.gene043784:intron | 10.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | - | chr2.1:40032545-40032564 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr2.1:40032646-40032665 | MS.gene043784:intron | 15.0% |
| !! | TAATTAATAAATACATCACA+TGG | + | chr2.1:40033196-40033215 | MS.gene043784:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr2.1:40032645-40032664 | MS.gene043784:intron | 15.0% |
| !!! | ATACATATTTTTCATTTTCA+GGG | + | chr2.1:40032877-40032896 | MS.gene043784:intron | 15.0% |
| !!! | TATACATATTTTTCATTTTC+AGG | + | chr2.1:40032876-40032895 | MS.gene043784:intron | 15.0% |
| !!! | TCAGATTTTTTTTTTTTGAT+GGG | + | chr2.1:40031391-40031410 | MS.gene043784:intron | 15.0% |
| !!! | TTATTATTATTGCTAGTTTT+AGG | + | chr2.1:40032786-40032805 | MS.gene043784:intron | 15.0% |
| !!! | TTCAGATTTTTTTTTTTTGA+TGG | + | chr2.1:40031390-40031409 | MS.gene043784:intron | 15.0% |
| !! | AAAGAATGAATTTGATGAAT+TGG | + | chr2.1:40029958-40029977 | MS.gene043784:CDS | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr2.1:40032605-40032624 | MS.gene043784:intron | 20.0% |
| !! | AATATCACGTGTATAAAAAA+TGG | - | chr2.1:40032380-40032399 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr2.1:40032678-40032697 | MS.gene043784:intron | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | - | chr2.1:40032546-40032565 | None:intergenic | 20.0% |
| !! | GAAAATTTCTTACTTGAATT+GGG | - | chr2.1:40030493-40030512 | None:intergenic | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr2.1:40032679-40032698 | MS.gene043784:intron | 20.0% |
| !! | TCAACAAAACTTAATGTATT+TGG | - | chr2.1:40030957-40030976 | None:intergenic | 20.0% |
| !! | TCAACATAAATTGTTGTATT+TGG | + | chr2.1:40030917-40030936 | MS.gene043784:intron | 20.0% |
| !! | TCATAATAATCGTAACATAA+TGG | + | chr2.1:40033372-40033391 | MS.gene043784:intron | 20.0% |
| !! | TCATTAACATTCTTATTGAT+TGG | - | chr2.1:40029881-40029900 | None:intergenic | 20.0% |
| !! | TGAAAATTTCTTACTTGAAT+TGG | - | chr2.1:40030494-40030513 | None:intergenic | 20.0% |
| !! | TTAAGGACAAATTATATAGT+GGG | + | chr2.1:40031360-40031379 | MS.gene043784:intron | 20.0% |
| !! | TTAATGATTCAATTGAATTG+AGG | + | chr2.1:40029894-40029913 | MS.gene043784:CDS | 20.0% |
| !! | TTATCTTTCTTGATTGAATT+GGG | - | chr2.1:40029796-40029815 | None:intergenic | 20.0% |
| !! | TTATTATTACCTGCAAATTA+AGG | - | chr2.1:40031150-40031169 | None:intergenic | 20.0% |
| !! | TTTAAGGACAAATTATATAG+TGG | + | chr2.1:40031359-40031378 | MS.gene043784:intron | 20.0% |
| !!! | ACATTTGGAGTTTATATTTA+AGG | + | chr2.1:40031343-40031362 | MS.gene043784:intron | 20.0% |
| !!! | ACCAATTTTTGCTTATATTT+TGG | + | chr2.1:40030976-40030995 | MS.gene043784:intron | 20.0% |
| !!! | ATCAGTATTTTTAAGACATT+TGG | + | chr2.1:40031283-40031302 | MS.gene043784:intron | 20.0% |
| !!! | ATTGTTTTACATTGACATAT+TGG | - | chr2.1:40033640-40033659 | None:intergenic | 20.0% |
| !!! | CAACATTAAATTTGTTTTTG+TGG | + | chr2.1:40032063-40032082 | MS.gene043784:intron | 20.0% |
| !!! | CAGTCAATTTTGTATTTTTT+GGG | + | chr2.1:40030522-40030541 | MS.gene043784:intron | 20.0% |
| !!! | CCAATTTTTGCTTATATTTT+GGG | + | chr2.1:40030977-40030996 | MS.gene043784:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr2.1:40032715-40032734 | MS.gene043784:intron | 20.0% |
| !!! | GATATGATAAAGCAAATTTT+TGG | + | chr2.1:40033770-40033789 | MS.gene043784:intron | 20.0% |
| !!! | TACATATCTACTCTTTTATA+CGG | + | chr2.1:40031998-40032017 | MS.gene043784:intron | 20.0% |
| !!! | TCAGTCAATTTTGTATTTTT+TGG | + | chr2.1:40030521-40030540 | MS.gene043784:intron | 20.0% |
| !!! | TCTTTTATTTTGGTAAACTA+GGG | + | chr2.1:40033334-40033353 | MS.gene043784:intron | 20.0% |
| !!! | TGTGGATTTTTTTTTTTTTG+AGG | + | chr2.1:40032081-40032100 | MS.gene043784:intron | 20.0% |
| !!! | TGTGTTTTACTAATCTTTTA+AGG | + | chr2.1:40030577-40030596 | MS.gene043784:intron | 20.0% |
| !!! | TTTTCTTATTCTAAGACATT+TGG | + | chr2.1:40031328-40031347 | MS.gene043784:intron | 20.0% |
| ! | AATTTGATGAATTGGATGAT+GGG | + | chr2.1:40029966-40029985 | MS.gene043784:CDS | 25.0% |
| ! | AGAATTCATTCAAATAAGGT+AGG | - | chr2.1:40031494-40031513 | None:intergenic | 25.0% |
| ! | ATACTATCAACAACACTATA+TGG | + | chr2.1:40034029-40034048 | MS.gene043784:CDS | 25.0% |
| ! | ATAGTGTAGAATAGATTAGA+CGG | + | chr2.1:40031925-40031944 | MS.gene043784:intron | 25.0% |
| ! | CCCAAAATATAAGCAAAAAT+TGG | - | chr2.1:40030980-40030999 | None:intergenic | 25.0% |
| ! | CTTATCTTTCTTGATTGAAT+TGG | - | chr2.1:40029797-40029816 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr2.1:40032604-40032623 | MS.gene043784:intron | 25.0% |
| ! | GAATCAACAAGAAAATGATA+GGG | + | chr2.1:40030231-40030250 | MS.gene043784:CDS | 25.0% |
| ! | GACAAGAATTCATTCAAATA+AGG | - | chr2.1:40031498-40031517 | None:intergenic | 25.0% |
| ! | TAAGGACAAATTATATAGTG+GGG | + | chr2.1:40031361-40031380 | MS.gene043784:intron | 25.0% |
| ! | TACTTAAATTACCTTCATTG+TGG | - | chr2.1:40031556-40031575 | None:intergenic | 25.0% |
| ! | TAGTAATAATGTAGATCTGA+CGG | + | chr2.1:40032441-40032460 | MS.gene043784:intron | 25.0% |
| ! | TATATAAATAAAGGGGAAAG+TGG | + | chr2.1:40032589-40032608 | MS.gene043784:intron | 25.0% |
| ! | TCTACATTATTACTATGCAT+TGG | - | chr2.1:40032436-40032455 | None:intergenic | 25.0% |
| ! | TGAATCAACAAGAAAATGAT+AGG | + | chr2.1:40030230-40030249 | MS.gene043784:CDS | 25.0% |
| ! | TTTCATAACTATTTGGAAGA+TGG | + | chr2.1:40031683-40031702 | MS.gene043784:CDS | 25.0% |
| ! | TTTGTGATGAAATCTCATAT+TGG | - | chr2.1:40030380-40030399 | None:intergenic | 25.0% |
| !! | TAAAATCGGTAAGTTTTCAA+AGG | + | chr2.1:40031707-40031726 | MS.gene043784:intron | 25.0% |
| !! | TTCAAAACAATCTTCTTTTC+TGG | - | chr2.1:40030271-40030290 | None:intergenic | 25.0% |
| !!! | ATTATTGCTAGTTTTAGGTT+TGG | + | chr2.1:40032791-40032810 | MS.gene043784:intron | 25.0% |
| !!! | CACACACATTTTCTAAAATT+AGG | - | chr2.1:40030561-40030580 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr2.1:40032714-40032733 | MS.gene043784:intron | 25.0% |
| !!! | GTCTTTTATTTTGGTAAACT+AGG | + | chr2.1:40033333-40033352 | MS.gene043784:intron | 25.0% |
| !!! | GTGACAATTGTCTTTTATTT+TGG | + | chr2.1:40033324-40033343 | MS.gene043784:intron | 25.0% |
| !!! | TTGAATTCCTTTTGATTGTA+GGG | - | chr2.1:40030447-40030466 | None:intergenic | 25.0% |
| !!! | TTTGAATTCCTTTTGATTGT+AGG | - | chr2.1:40030448-40030467 | None:intergenic | 25.0% |
| !!! | TTTTTGAGGAATTGTTTTTC+TGG | + | chr2.1:40032095-40032114 | MS.gene043784:intron | 25.0% |
| !!! | TTTTTTTTTTGATGGGTTCA+GGG | + | chr2.1:40031398-40031417 | MS.gene043784:intron | 25.0% |
| !!! | TTTTTTTTTTTGATGGGTTC+AGG | + | chr2.1:40031397-40031416 | MS.gene043784:intron | 25.0% |
| AAATAAGACTGCAAAAAGCA+AGG | - | chr2.1:40031073-40031092 | None:intergenic | 30.0% | |
| AATAAGACTGCAAAAAGCAA+GGG | - | chr2.1:40031072-40031091 | None:intergenic | 30.0% | |
| AATCACCACTCTAATTTAGT+TGG | + | chr2.1:40031193-40031212 | MS.gene043784:intron | 30.0% | |
| ACACTAGTTAAACTAATGTG+TGG | + | chr2.1:40033960-40033979 | MS.gene043784:intron | 30.0% | |
| ACGAAAAGTAAAGACAAAAG+AGG | - | chr2.1:40033466-40033485 | None:intergenic | 30.0% | |
| ACTAACTCTAGTACTATTTC+AGG | + | chr2.1:40031806-40031825 | MS.gene043784:intron | 30.0% | |
| AGTAATAATGTAGATCTGAC+GGG | + | chr2.1:40032442-40032461 | MS.gene043784:intron | 30.0% | |
| ATAAGATCTGATATGCAGAA+GGG | + | chr2.1:40029812-40029831 | MS.gene043784:CDS | 30.0% | |
| ATACGACAAAGATATAAGGA+AGG | + | chr2.1:40032346-40032365 | MS.gene043784:intron | 30.0% | |
| ATCACCACTCTAATTTAGTT+GGG | + | chr2.1:40031194-40031213 | MS.gene043784:intron | 30.0% | |
| ATGAAGAGTGATCAAGTTAA+AGG | + | chr2.1:40029575-40029594 | MS.gene043784:CDS | 30.0% | |
| ATGCAAAGGATATCAATTTG+AGG | + | chr2.1:40030834-40030853 | MS.gene043784:CDS | 30.0% | |
| ATTTGGAAGATGGCTAAAAT+CGG | + | chr2.1:40031693-40031712 | MS.gene043784:CDS | 30.0% | |
| CATTATTAAATCCACTGTTG+AGG | - | chr2.1:40030747-40030766 | None:intergenic | 30.0% | |
| GAATGAATCAGAGAAAAAAG+TGG | + | chr2.1:40030288-40030307 | MS.gene043784:CDS | 30.0% | |
| GAATTTGATGAATTGGATGA+TGG | + | chr2.1:40029965-40029984 | MS.gene043784:CDS | 30.0% | |
| GTGGAAGTTTCATAACTATT+TGG | + | chr2.1:40031676-40031695 | MS.gene043784:CDS | 30.0% | |
| TAAATATAAGCATGCACGAT+CGG | - | chr2.1:40031978-40031997 | None:intergenic | 30.0% | |
| TAAGAGAACAAGATGCAATT+TGG | + | chr2.1:40031454-40031473 | MS.gene043784:CDS | 30.0% | |
| TCCAATACGACAAAGATATA+AGG | + | chr2.1:40032342-40032361 | MS.gene043784:intron | 30.0% | |
| TCCTTATATCTTTGTCGTAT+TGG | - | chr2.1:40032346-40032365 | None:intergenic | 30.0% | |
| TGAGAAAGATGAAAATGTTG+AGG | + | chr2.1:40030006-40030025 | MS.gene043784:CDS | 30.0% | |
| TGAGGAAATTGAAATTGAGA+TGG | + | chr2.1:40030147-40030166 | MS.gene043784:CDS | 30.0% | |
| TGCAAATTAAGGATCTATAG+AGG | - | chr2.1:40031139-40031158 | None:intergenic | 30.0% | |
| TTGATTCACAGTAACAACTT+TGG | - | chr2.1:40030218-40030237 | None:intergenic | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | - | chr2.1:40032541-40032560 | None:intergenic | 30.0% | |
| TTTCTTACTTGAATTGGGTT+TGG | - | chr2.1:40030488-40030507 | None:intergenic | 30.0% | |
| ! | AATTGGGTTTGGAGAAATTT+TGG | - | chr2.1:40030477-40030496 | None:intergenic | 30.0% |
| ! | CAACAGTGGATTTAATAATG+TGG | + | chr2.1:40030747-40030766 | MS.gene043784:intron | 30.0% |
| ! | GGTAAATTTCCTGATTTTGA+TGG | + | chr2.1:40031893-40031912 | MS.gene043784:intron | 30.0% |
| ! | TGTTTATTTCATGCGAGTTT+TGG | + | chr2.1:40032313-40032332 | MS.gene043784:intron | 30.0% |
| ! | TTCCTTTGGAAATCTGAATT+GGG | - | chr2.1:40029712-40029731 | None:intergenic | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr2.1:40032692-40032711 | MS.gene043784:intron | 30.0% |
| ! | TTTCCTTTGGAAATCTGAAT+TGG | - | chr2.1:40029713-40029732 | None:intergenic | 30.0% |
| ! | TTTTCATCATACTAGTGTAG+TGG | - | chr2.1:40033497-40033516 | None:intergenic | 30.0% |
| !! | AAACACAGTATTGTTGACTT+TGG | - | chr2.1:40033424-40033443 | None:intergenic | 30.0% |
| !! | AACACAGTATTGTTGACTTT+GGG | - | chr2.1:40033423-40033442 | None:intergenic | 30.0% |
| !! | TCTATAGATCCTTAATTTGC+AGG | + | chr2.1:40031138-40031157 | MS.gene043784:CDS | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr2.1:40032693-40032712 | MS.gene043784:intron | 30.0% |
| !! | TGAATTCCTTTTGATTGTAG+GGG | - | chr2.1:40030446-40030465 | None:intergenic | 30.0% |
| !! | TTTCCTGATTTTGATGGTAT+AGG | + | chr2.1:40031899-40031918 | MS.gene043784:intron | 30.0% |
| !!! | TTTGGTTTTCTTTTAGCCAA+TGG | + | chr2.1:40033228-40033247 | MS.gene043784:intron | 30.0% |
| !!! | TTTTTTTTTGATGGGTTCAG+GGG | + | chr2.1:40031399-40031418 | MS.gene043784:intron | 30.0% |
| AAAAAACATGATTGCGCCAT+TGG | - | chr2.1:40033247-40033266 | None:intergenic | 35.0% | |
| AAACTAGGGAACACAATTGT+TGG | + | chr2.1:40033348-40033367 | MS.gene043784:intron | 35.0% | |
| AAATATCCAGAGAGAGTCAT+TGG | + | chr2.1:40033557-40033576 | MS.gene043784:intron | 35.0% | |
| AAATGTGTACGAATTGCAGT+TGG | + | chr2.1:40031626-40031645 | MS.gene043784:intron | 35.0% | |
| AACAATCCCCTACAATCAAA+AGG | + | chr2.1:40030437-40030456 | MS.gene043784:CDS | 35.0% | |
| AAGAGTGATCAAGTTAAAGG+TGG | + | chr2.1:40029578-40029597 | MS.gene043784:CDS | 35.0% | |
| ACCTTACAAGTGATAAGAGA+GGG | - | chr2.1:40032256-40032275 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr2.1:40032728-40032747 | MS.gene043784:intron | 35.0% | |
| AGATAACTGCAAGATAGACA+AGG | - | chr2.1:40031115-40031134 | None:intergenic | 35.0% | |
| AGATTGAGAAGAACCTCAAT+TGG | + | chr2.1:40029662-40029681 | MS.gene043784:CDS | 35.0% | |
| AGTACTATTTCAGGCTTCTT+TGG | + | chr2.1:40031815-40031834 | MS.gene043784:intron | 35.0% | |
| AGTCTCATCTTCTTATGCAA+AGG | + | chr2.1:40030820-40030839 | MS.gene043784:CDS | 35.0% | |
| ATCAACAACACTATATGGTG+AGG | + | chr2.1:40034034-40034053 | MS.gene043784:CDS | 35.0% | |
| ATGAAATGGAAGACTCTTCT+TGG | - | chr2.1:40029765-40029784 | None:intergenic | 35.0% | |
| ATTGGGCTTCTTGTATGAAA+TGG | - | chr2.1:40029779-40029798 | None:intergenic | 35.0% | |
| ATTTCTGCAATGTCCTATGT+AGG | + | chr2.1:40031089-40031108 | MS.gene043784:CDS | 35.0% | |
| CAAAGGCCTAACAAAATGAT+GGG | + | chr2.1:40031724-40031743 | MS.gene043784:intron | 35.0% | |
| CAACCTATACCATCAAAATC+AGG | - | chr2.1:40031905-40031924 | None:intergenic | 35.0% | |
| CCTACGTGTTAAAATTAGAG+TGG | - | chr2.1:40031227-40031246 | None:intergenic | 35.0% | |
| CGATATAACGCTTACTGTTT+CGG | + | chr2.1:40031029-40031048 | MS.gene043784:intron | 35.0% | |
| CTAGTTAAACTAATGTGTGG+TGG | + | chr2.1:40033963-40033982 | MS.gene043784:intron | 35.0% | |
| CTATATAGAGTTTACTCCCT+CGG | + | chr2.1:40030870-40030889 | MS.gene043784:intron | 35.0% | |
| GAAAAAGAAGAAGAAGAAGG+AGG | + | chr2.1:40029620-40029639 | MS.gene043784:CDS | 35.0% | |
| GAATCCTTTCTTGACTTTGT+TGG | - | chr2.1:40034145-40034164 | None:intergenic | 35.0% | |
| GATAAGATCTGATATGCAGA+AGG | + | chr2.1:40029811-40029830 | MS.gene043784:CDS | 35.0% | |
| GATATCAAGCAATGTTGATG+TGG | + | chr2.1:40030054-40030073 | MS.gene043784:CDS | 35.0% | |
| GATTGAGAAGAACCTCAATT+GGG | + | chr2.1:40029663-40029682 | MS.gene043784:CDS | 35.0% | |
| GATTTCCAAAGGAAAAACAG+AGG | + | chr2.1:40029718-40029737 | MS.gene043784:CDS | 35.0% | |
| GCAATTCGTACACATTTAGA+GGG | - | chr2.1:40031623-40031642 | None:intergenic | 35.0% | |
| GCAGAAAAAGAAGAAGAAGA+AGG | + | chr2.1:40029617-40029636 | MS.gene043784:CDS | 35.0% | |
| GGATAATAAAAGAAGAGGTG+TGG | + | chr2.1:40029523-40029542 | MS.gene043784:CDS | 35.0% | |
| TACCTTACAAGTGATAAGAG+AGG | - | chr2.1:40032257-40032276 | None:intergenic | 35.0% | |
| TCAAAATTCACCTGAATCAG+TGG | + | chr2.1:40030078-40030097 | MS.gene043784:CDS | 35.0% | |
| TCAAAGGCCTAACAAAATGA+TGG | + | chr2.1:40031723-40031742 | MS.gene043784:intron | 35.0% | |
| TCAACAACACTATATGGTGA+GGG | + | chr2.1:40034035-40034054 | MS.gene043784:CDS | 35.0% | |
| TCAAGATCAGCATTTGTGTT+TGG | + | chr2.1:40030779-40030798 | MS.gene043784:CDS | 35.0% | |
| TCAGCACAATTAACTGCATA+TGG | + | chr2.1:40031872-40031891 | MS.gene043784:CDS | 35.0% | |
| TCCCAAAATGTAAGCACAAA+CGG | + | chr2.1:40030893-40030912 | MS.gene043784:intron | 35.0% | |
| TGATTACACTGACAGACAAA+TGG | + | chr2.1:40031774-40031793 | MS.gene043784:intron | 35.0% | |
| TGCAATTCGTACACATTTAG+AGG | - | chr2.1:40031624-40031643 | None:intergenic | 35.0% | |
| TGCAATTTGGATGCTGAAAT+TGG | + | chr2.1:40031467-40031486 | MS.gene043784:CDS | 35.0% | |
| TGGAGTCAACATAGAATAGA+AGG | - | chr2.1:40032416-40032435 | None:intergenic | 35.0% | |
| TTATGATTTCTCCTCAACAG+TGG | + | chr2.1:40030733-40030752 | MS.gene043784:intron | 35.0% | |
| TTCTCCCAACTAAATTAGAG+TGG | - | chr2.1:40031201-40031220 | None:intergenic | 35.0% | |
| TTGATCCCATTACTTGCATT+GGG | + | chr2.1:40033287-40033306 | MS.gene043784:intron | 35.0% | |
| TTTCTTCTGTTCTGCTTCAT+TGG | - | chr2.1:40030317-40030336 | None:intergenic | 35.0% | |
| TTTGATCCCATTACTTGCAT+TGG | + | chr2.1:40033286-40033305 | MS.gene043784:intron | 35.0% | |
| ! | GAAAGACCCATCATTTTGTT+AGG | - | chr2.1:40031733-40031752 | None:intergenic | 35.0% |
| ! | GAATGAAAGCTTTGATGTGA+AGG | + | chr2.1:40030171-40030190 | MS.gene043784:CDS | 35.0% |
| ! | TCAGCATTTGTGTTTGGAAT+TGG | + | chr2.1:40030785-40030804 | MS.gene043784:CDS | 35.0% |
| !! | AGCTAGTTTGATTTTGTCGT+TGG | - | chr2.1:40033135-40033154 | None:intergenic | 35.0% |
| !! | AGTATTGTTGACTTTGGGAT+TGG | - | chr2.1:40033418-40033437 | None:intergenic | 35.0% |
| !! | ATCACATGGATTAGCATCTT+TGG | + | chr2.1:40033210-40033229 | MS.gene043784:intron | 35.0% |
| !! | CCACTCTAATTTTAACACGT+AGG | + | chr2.1:40031224-40031243 | MS.gene043784:intron | 35.0% |
| !! | GTATTGTTGACTTTGGGATT+GGG | - | chr2.1:40033417-40033436 | None:intergenic | 35.0% |
| !! | TAGACTCTGCAACTTGTTTT+GGG | - | chr2.1:40030644-40030663 | None:intergenic | 35.0% |
| !! | TTGTGTTGTTTCTGTCTAAC+TGG | - | chr2.1:40034111-40034130 | None:intergenic | 35.0% |
| !!! | AAACTGAAAGCACTTTTCTC+TGG | + | chr2.1:40031519-40031538 | MS.gene043784:CDS | 35.0% |
| !!! | ATTTTTGGATTCGTCGATTC+CGG | + | chr2.1:40033785-40033804 | MS.gene043784:CDS | 35.0% |
| !!! | CTATTTGTTTTGGCAAGATG+TGG | + | chr2.1:40031657-40031676 | MS.gene043784:CDS | 35.0% |
| !!! | GGCAGTTTTGCTATTTGTTT+TGG | + | chr2.1:40031647-40031666 | MS.gene043784:CDS | 35.0% |
| !!! | TTGCTTATATTTTGGGACAG+AGG | + | chr2.1:40030984-40031003 | MS.gene043784:intron | 35.0% |
| AAACAGGATGTGATGAAGCA+TGG | + | chr2.1:40034076-40034095 | MS.gene043784:CDS | 40.0% | |
| AAAGAAGAAGAAGAAGGAGG+AGG | + | chr2.1:40029623-40029642 | MS.gene043784:CDS | 40.0% | |
| AAATTATACTCCCTCCGTTC+CGG | - | chr2.1:40032750-40032769 | None:intergenic | 40.0% | |
| AACAGGATGTGATGAAGCAT+GGG | + | chr2.1:40034077-40034096 | MS.gene043784:CDS | 40.0% | |
| AAGAGACCCAATGCAAGTAA+TGG | - | chr2.1:40033296-40033315 | None:intergenic | 40.0% | |
| AAGATAGACAAGGCCTACAT+AGG | - | chr2.1:40031105-40031124 | None:intergenic | 40.0% | |
| ACTACAAGAGGAACAGAAAC+TGG | - | chr2.1:40030415-40030434 | None:intergenic | 40.0% | |
| ACTATATGGTGAGGGATGAA+TGG | + | chr2.1:40034043-40034062 | MS.gene043784:CDS | 40.0% | |
| AGAGACCCAATGCAAGTAAT+GGG | - | chr2.1:40033295-40033314 | None:intergenic | 40.0% | |
| AGCCCAATTCAGATTTCCAA+AGG | + | chr2.1:40029707-40029726 | MS.gene043784:CDS | 40.0% | |
| ATCATACTAGTGTAGTGGCT+GGG | - | chr2.1:40033492-40033511 | None:intergenic | 40.0% | |
| ATCTGTTGTTGCTCGCATTT+GGG | + | chr2.1:40033879-40033898 | MS.gene043784:CDS | 40.0% | |
| ATGCACTCACAAAAAAGCTG+TGG | + | chr2.1:40033822-40033841 | MS.gene043784:CDS | 40.0% | |
| ATTTAGTGTATGCCGACAGA+AGG | - | chr2.1:40032034-40032053 | None:intergenic | 40.0% | |
| CAAAACAAGTTGCAGAGTCT+AGG | + | chr2.1:40030643-40030662 | MS.gene043784:CDS | 40.0% | |
| CCCAAAATGTAAGCACAAAC+GGG | + | chr2.1:40030894-40030913 | MS.gene043784:intron | 40.0% | |
| CTATATGGTGAGGGATGAAT+GGG | + | chr2.1:40034044-40034063 | MS.gene043784:CDS | 40.0% | |
| GAATACGAAGAGCAGATCTT+TGG | - | chr2.1:40031854-40031873 | None:intergenic | 40.0% | |
| GCTACCAACAAAGTCAAGAA+AGG | + | chr2.1:40034138-40034157 | MS.gene043784:CDS | 40.0% | |
| GGATTATGATACCCTTCTGT+CGG | + | chr2.1:40032019-40032038 | MS.gene043784:intron | 40.0% | |
| GTAACAACTTTGGATTCTGC+TGG | - | chr2.1:40030208-40030227 | None:intergenic | 40.0% | |
| GTAGAATAGATTAGACGGTG+CGG | + | chr2.1:40031930-40031949 | MS.gene043784:intron | 40.0% | |
| TAGGCATATTCGGTCTAGTA+TGG | + | chr2.1:40033848-40033867 | MS.gene043784:CDS | 40.0% | |
| TGAAGCAGAACAGAAGAAAG+TGG | + | chr2.1:40030318-40030337 | MS.gene043784:CDS | 40.0% | |
| TGATTCTGAATCAGATGGTG+AGG | + | chr2.1:40030114-40030133 | MS.gene043784:CDS | 40.0% | |
| TGTCAATTAAATTGGGACGG+AGG | - | chr2.1:40032538-40032557 | None:intergenic | 40.0% | |
| TTCTTGAACTCGATCCAACT+CGG | - | chr2.1:40029930-40029949 | None:intergenic | 40.0% | |
| TTGGCATTCACCACTTTCTT+CGG | - | chr2.1:40030361-40030380 | None:intergenic | 40.0% | |
| TTGGTTCCATCAGAAATGCA+TGG | - | chr2.1:40029746-40029765 | None:intergenic | 40.0% | |
| TTTAGTGTATGCCGACAGAA+GGG | - | chr2.1:40032033-40032052 | None:intergenic | 40.0% | |
| TTTCTTCGGTTCTGCTTCAT+TGG | - | chr2.1:40030347-40030366 | None:intergenic | 40.0% | |
| ! | ACCCGTTTGTGCTTACATTT+TGG | - | chr2.1:40030898-40030917 | None:intergenic | 40.0% |
| ! | CCCGTTTGTGCTTACATTTT+GGG | - | chr2.1:40030897-40030916 | None:intergenic | 40.0% |
| ! | CTACTGCGTTCTTCTTCTTT+TGG | - | chr2.1:40030610-40030629 | None:intergenic | 40.0% |
| ! | TCTCTTTGAAGACCCAATTG+AGG | - | chr2.1:40029678-40029697 | None:intergenic | 40.0% |
| !! | CTAGACTCTGCAACTTGTTT+TGG | - | chr2.1:40030645-40030664 | None:intergenic | 40.0% |
| !! | TGGTTCCTCTGTTTTTCCTT+TGG | - | chr2.1:40029726-40029745 | None:intergenic | 40.0% |
| !!! | TGCAACTTGTTTTGGGTTTG+TGG | - | chr2.1:40030637-40030656 | None:intergenic | 40.0% |
| !!! | TTTTTGGATTCGTCGATTCC+GGG | + | chr2.1:40033786-40033805 | MS.gene043784:CDS | 40.0% |
| AGATCTGATATGCAGAAGGG+TGG | + | chr2.1:40029815-40029834 | MS.gene043784:CDS | 45.0% | |
| ATGGGTCAGTTATTCCGGAA+CGG | + | chr2.1:40032733-40032752 | MS.gene043784:intron | 45.0% | |
| ATTACCTTCATTGTGGTGCC+AGG | - | chr2.1:40031549-40031568 | None:intergenic | 45.0% | |
| CACAAAAAAGCTGTGGCTCT+AGG | + | chr2.1:40033829-40033848 | MS.gene043784:CDS | 45.0% | |
| CATCATACTAGTGTAGTGGC+TGG | - | chr2.1:40033493-40033512 | None:intergenic | 45.0% | |
| CATCTGTTGTTGCTCGCATT+TGG | + | chr2.1:40033878-40033897 | MS.gene043784:CDS | 45.0% | |
| CCTGAATCAGTGGTTCATGT+TGG | + | chr2.1:40030088-40030107 | MS.gene043784:CDS | 45.0% | |
| GAAGAAGGAGGAGGAAATGT+TGG | + | chr2.1:40029632-40029651 | MS.gene043784:CDS | 45.0% | |
| GAATCAGTGGTTCATGTTGG+TGG | + | chr2.1:40030091-40030110 | MS.gene043784:CDS | 45.0% | |
| GAATGGGTGGAAGATGAAAC+AGG | + | chr2.1:40034060-40034079 | MS.gene043784:CDS | 45.0% | |
| GAGGAACCATGCATTTCTGA+TGG | + | chr2.1:40029737-40029756 | MS.gene043784:CDS | 45.0% | |
| GAGGGTTCTTCTATCTATGC+TGG | - | chr2.1:40031605-40031624 | None:intergenic | 45.0% | |
| GCAAAACCAATGACTCTCTC+TGG | - | chr2.1:40033566-40033585 | None:intergenic | 45.0% | |
| GCCCTCTCTTATCACTTGTA+AGG | + | chr2.1:40032252-40032271 | MS.gene043784:intron | 45.0% | |
| GGGGATTGTTTCACTACAAG+AGG | - | chr2.1:40030427-40030446 | None:intergenic | 45.0% | |
| GGTGGTGATTCTGAATCAGA+TGG | + | chr2.1:40030109-40030128 | MS.gene043784:CDS | 45.0% | |
| TGAAGCAGAACCGAAGAAAG+TGG | + | chr2.1:40030348-40030367 | MS.gene043784:CDS | 45.0% | |
| TGGTGAGGTTGAAGATGATG+AGG | + | chr2.1:40030129-40030148 | MS.gene043784:CDS | 45.0% | |
| !! | CCAACATGAACCACTGATTC+AGG | - | chr2.1:40030091-40030110 | None:intergenic | 45.0% |
| !!! | TGCTTACATTTTGGGACCGA+GGG | - | chr2.1:40030889-40030908 | None:intergenic | 45.0% |
| !! | AAGAAAAATATATAAATAAA+GGG | + | chr2.1:40032581-40032600 | MS.gene043784:intron | 5.0% |
| !! | TAAGAAAAATATATAAATAA+AGG | + | chr2.1:40032580-40032599 | MS.gene043784:intron | 5.0% |
| AATGGTCCTCCACATCCTTG+TGG | + | chr2.1:40033390-40033409 | MS.gene043784:intron | 50.0% | |
| AGATCCTGGCACCACAATGA+AGG | + | chr2.1:40031542-40031561 | MS.gene043784:CDS | 50.0% | |
| CATGCACGATCGGCTAATGT+GGG | - | chr2.1:40031968-40031987 | None:intergenic | 50.0% | |
| GAAGGAGGAGGAAATGTTGG+TGG | + | chr2.1:40029635-40029654 | MS.gene043784:CDS | 50.0% | |
| GAGGAAGACGAAATCCGAGT+TGG | + | chr2.1:40029913-40029932 | MS.gene043784:CDS | 50.0% | |
| GTCAGTTATTCCGGAACGGA+GGG | + | chr2.1:40032737-40032756 | MS.gene043784:intron | 50.0% | |
| GTGAAGCTGCAGGGAAATTG+AGG | + | chr2.1:40029840-40029859 | MS.gene043784:CDS | 50.0% | |
| TATGGTGAGGGATGAATGGG+TGG | + | chr2.1:40034047-40034066 | MS.gene043784:CDS | 50.0% | |
| TCTGATATGCAGAAGGGTGG+TGG | + | chr2.1:40029818-40029837 | MS.gene043784:CDS | 50.0% | |
| TGCATGAATCCCATGCATCC+CGG | - | chr2.1:40033807-40033826 | None:intergenic | 50.0% | |
| TGTCGTTGGATGAGACGATG+AGG | - | chr2.1:40033121-40033140 | None:intergenic | 50.0% | |
| !! | ACTTTGGGATTGGGACCACA+AGG | - | chr2.1:40033408-40033427 | None:intergenic | 50.0% |
| !! | GCACTTTTCTCTGGAGATCC+TGG | + | chr2.1:40031528-40031547 | MS.gene043784:CDS | 50.0% |
| !! | GCTGTGGCTCTAGGCATATT+CGG | + | chr2.1:40033838-40033857 | MS.gene043784:CDS | 50.0% |
| !!! | GTGCTTACATTTTGGGACCG+AGG | - | chr2.1:40030890-40030909 | None:intergenic | 50.0% |
| AGACGGTGCGGTGCTTTCAT+GGG | + | chr2.1:40031942-40031961 | MS.gene043784:intron | 55.0% | |
| GCATGCACGATCGGCTAATG+TGG | - | chr2.1:40031969-40031988 | None:intergenic | 55.0% | |
| GGATTGGGACCACAAGGATG+TGG | - | chr2.1:40033402-40033421 | None:intergenic | 55.0% | |
| GGTCAGTTATTCCGGAACGG+AGG | + | chr2.1:40032736-40032755 | MS.gene043784:intron | 55.0% | |
| GTTGTTGCTCGCATTTGGGC+AGG | + | chr2.1:40033883-40033902 | MS.gene043784:CDS | 55.0% | |
| TAGACGGTGCGGTGCTTTCA+TGG | + | chr2.1:40031941-40031960 | MS.gene043784:intron | 55.0% | |
| TTGGGACCACAAGGATGTGG+AGG | - | chr2.1:40033399-40033418 | None:intergenic | 55.0% | |
| ! | AGAAGAGGTGTGGTTGCTGC+AGG | + | chr2.1:40029533-40029552 | MS.gene043784:CDS | 55.0% |
| ! | GAAGAGGTGTGGTTGCTGCA+GGG | + | chr2.1:40029534-40029553 | MS.gene043784:CDS | 55.0% |
| !! | TCGTCGATTCCGGGATGCAT+GGG | + | chr2.1:40033795-40033814 | MS.gene043784:CDS | 55.0% |
| !! | TTCGTCGATTCCGGGATGCA+TGG | + | chr2.1:40033794-40033813 | MS.gene043784:CDS | 55.0% |
| GGTTGCTGCAGGGTCAGTGT+GGG | + | chr2.1:40029544-40029563 | MS.gene043784:CDS | 60.0% | |
| TGGTTGCTGCAGGGTCAGTG+TGG | + | chr2.1:40029543-40029562 | MS.gene043784:CDS | 60.0% | |
| ! | AAGGGTGGTGGTGAAGCTGC+AGG | + | chr2.1:40029830-40029849 | MS.gene043784:CDS | 60.0% |
| ! | AGGGTGGTGGTGAAGCTGCA+GGG | + | chr2.1:40029831-40029850 | MS.gene043784:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 40029521 | 40034167 | 40029521 | ID=MS.gene043784 |
| chr2.1 | mRNA | 40029521 | 40034167 | 40029521 | ID=MS.gene043784.t1;Parent=MS.gene043784 |
| chr2.1 | exon | 40029521 | 40030499 | 40029521 | ID=MS.gene043784.t1.exon1;Parent=MS.gene043784.t1 |
| chr2.1 | CDS | 40029521 | 40030499 | 40029521 | ID=cds.MS.gene043784.t1;Parent=MS.gene043784.t1 |
| chr2.1 | exon | 40030599 | 40030664 | 40030599 | ID=MS.gene043784.t1.exon2;Parent=MS.gene043784.t1 |
| chr2.1 | CDS | 40030599 | 40030664 | 40030599 | ID=cds.MS.gene043784.t1;Parent=MS.gene043784.t1 |
| chr2.1 | exon | 40030753 | 40030855 | 40030753 | ID=MS.gene043784.t1.exon3;Parent=MS.gene043784.t1 |
| chr2.1 | CDS | 40030753 | 40030855 | 40030753 | ID=cds.MS.gene043784.t1;Parent=MS.gene043784.t1 |
| chr2.1 | exon | 40031085 | 40031159 | 40031085 | ID=MS.gene043784.t1.exon4;Parent=MS.gene043784.t1 |
| chr2.1 | CDS | 40031085 | 40031159 | 40031085 | ID=cds.MS.gene043784.t1;Parent=MS.gene043784.t1 |
| chr2.1 | exon | 40031419 | 40031563 | 40031419 | ID=MS.gene043784.t1.exon5;Parent=MS.gene043784.t1 |
| chr2.1 | CDS | 40031419 | 40031563 | 40031419 | ID=cds.MS.gene043784.t1;Parent=MS.gene043784.t1 |
| chr2.1 | exon | 40031645 | 40031714 | 40031645 | ID=MS.gene043784.t1.exon6;Parent=MS.gene043784.t1 |
| chr2.1 | CDS | 40031645 | 40031714 | 40031645 | ID=cds.MS.gene043784.t1;Parent=MS.gene043784.t1 |
| chr2.1 | exon | 40031828 | 40031893 | 40031828 | ID=MS.gene043784.t1.exon7;Parent=MS.gene043784.t1 |
| chr2.1 | CDS | 40031828 | 40031893 | 40031828 | ID=cds.MS.gene043784.t1;Parent=MS.gene043784.t1 |
| chr2.1 | exon | 40033782 | 40033904 | 40033782 | ID=MS.gene043784.t1.exon8;Parent=MS.gene043784.t1 |
| chr2.1 | CDS | 40033782 | 40033904 | 40033782 | ID=cds.MS.gene043784.t1;Parent=MS.gene043784.t1 |
| chr2.1 | exon | 40034004 | 40034167 | 40034004 | ID=MS.gene043784.t1.exon9;Parent=MS.gene043784.t1 |
| chr2.1 | CDS | 40034004 | 40034167 | 40034004 | ID=cds.MS.gene043784.t1;Parent=MS.gene043784.t1 |
| Gene Sequence |
| Protein sequence |
