AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044608

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044608.t1 MTR_7g033165 97.638 381 9 0 1 381 1 381 0.0 780
MS.gene044608.t1 MTR_7g033165 97.000 300 9 0 1 300 1 300 0.0 601
MS.gene044608.t1 MTR_7g033150 52.850 386 172 4 1 378 1 384 7.90e-146 419
MS.gene044608.t1 MTR_7g033155 52.778 396 168 4 1 378 4 398 1.32e-145 419
MS.gene044608.t1 MTR_7g087190 52.486 362 163 6 26 381 36 394 1.79e-132 385
MS.gene044608.t1 MTR_6g007090 49.612 387 172 9 3 378 4 378 3.12e-129 376
MS.gene044608.t1 MTR_1g030220 51.451 379 174 5 8 381 14 387 5.75e-127 371
MS.gene044608.t1 MTR_8g089805 48.138 376 185 6 7 376 14 385 4.43e-123 361
MS.gene044608.t1 MTR_6g007095 50.646 387 170 9 1 377 4 379 1.75e-122 369
MS.gene044608.t1 MTR_6g007095 48.256 344 149 7 41 379 378 697 1.68e-100 313
MS.gene044608.t1 MTR_1g030340 49.081 381 182 6 5 380 16 389 3.65e-120 353
MS.gene044608.t1 MTR_8g038680 47.656 384 178 11 3 378 4 372 7.78e-120 352
MS.gene044608.t1 MTR_6g007100 46.154 377 185 5 3 379 4 362 2.55e-116 342
MS.gene044608.t1 MTR_1g030275 48.883 358 176 4 25 380 31 383 8.47e-116 342
MS.gene044608.t1 MTR_1g030230 50.142 353 167 4 32 380 31 378 2.21e-115 341
MS.gene044608.t1 MTR_1g030268 48.876 356 175 4 25 378 32 382 1.62e-111 331
MS.gene044608.t1 MTR_8g012540 46.418 349 164 10 3 343 4 337 8.88e-100 300
MS.gene044608.t1 MTR_7g116870 40.584 377 208 6 8 378 9 375 1.35e-99 300
MS.gene044608.t1 MTR_7g113860 42.192 365 192 8 12 370 15 366 6.97e-96 291
MS.gene044608.t1 MTR_8g089805 46.358 302 152 6 81 376 20 317 5.74e-94 284
MS.gene044608.t1 MTR_7g113860 41.398 372 202 10 6 370 10 372 1.04e-93 286
MS.gene044608.t1 MTR_8g028160 39.323 384 209 8 8 378 10 382 1.21e-92 283
MS.gene044608.t1 MTR_1g030265 48.197 305 147 5 81 380 53 351 1.11e-90 277
MS.gene044608.t1 MTR_1g030268 51.625 277 128 3 25 300 32 303 9.93e-89 271
MS.gene044608.t1 MTR_7g111780 40.730 356 176 10 33 379 36 365 4.31e-86 265
MS.gene044608.t1 MTR_1g082390 41.547 349 185 10 30 369 28 366 8.51e-86 265
MS.gene044608.t1 MTR_7g113860 41.077 297 164 6 79 370 8 298 5.45e-74 233
MS.gene044608.t1 MTR_7g111780 39.655 290 142 8 97 379 3 266 3.03e-65 208
MS.gene044608.t1 MTR_3g448360 32.982 379 219 11 9 371 3 362 1.01e-47 166
MS.gene044608.t1 MTR_2g079090 30.319 376 224 9 6 371 3 350 2.27e-47 165
MS.gene044608.t1 MTR_3g463960 32.970 367 211 11 26 375 37 385 7.31e-47 164
MS.gene044608.t1 MTR_3g463950 32.970 367 211 11 26 375 37 385 7.31e-47 164
MS.gene044608.t1 MTR_3g463970 32.970 367 211 11 26 375 37 385 7.31e-47 164
MS.gene044608.t1 MTR_3g463940 32.970 367 211 11 26 375 37 385 7.31e-47 164
MS.gene044608.t1 MTR_2g015650 32.394 355 206 9 31 370 29 364 1.20e-46 163
MS.gene044608.t1 MTR_3g463930 31.967 366 223 10 26 375 37 392 2.38e-46 163
MS.gene044608.t1 MTR_2g043980 32.648 389 208 13 8 380 9 359 3.40e-46 162
MS.gene044608.t1 MTR_2g079080 30.053 376 225 9 6 371 3 350 3.57e-46 162
MS.gene044608.t1 MTR_0029s0050 30.184 381 225 10 1 371 1 350 8.44e-46 161
MS.gene044608.t1 MTR_0029s0100 30.184 381 225 10 1 371 1 350 1.01e-45 160
MS.gene044608.t1 MTR_2g015580 32.778 360 210 11 25 370 39 380 1.51e-45 161
MS.gene044608.t1 MTR_2g015590 31.768 362 211 11 25 370 24 365 1.70e-44 158
MS.gene044608.t1 MTR_3g069780 30.491 387 228 12 1 371 1 362 5.35e-43 154
MS.gene044608.t1 MTR_3g438030 29.843 382 230 10 6 371 3 362 7.47e-43 153
MS.gene044608.t1 MTR_4g104240 30.390 385 221 12 5 370 11 367 7.91e-43 153
MS.gene044608.t1 MTR_2g015670 32.011 353 196 12 31 370 29 350 8.85e-42 150
MS.gene044608.t1 MTR_2g015630 30.199 351 207 13 38 370 36 366 4.19e-41 149
MS.gene044608.t1 MTR_3g069520 30.688 378 230 11 6 371 3 360 2.54e-38 141
MS.gene044608.t1 MTR_5g074270 28.533 375 222 12 1 359 1 345 8.80e-35 132
MS.gene044608.t1 MTR_3g052580 29.231 390 219 17 1 371 2 353 6.40e-32 124
MS.gene044608.t1 MTR_3g052580 29.306 389 218 17 1 370 1 351 1.08e-31 124
MS.gene044608.t1 MTR_8g031430 28.382 377 227 9 7 370 10 356 1.44e-31 123
MS.gene044608.t1 MTR_8g014910 28.232 379 213 14 4 363 9 347 1.63e-31 122
MS.gene044608.t1 MTR_2g100620 30.946 349 192 15 32 363 30 346 3.06e-31 122
MS.gene044608.t1 MTR_3g052480 28.385 384 224 15 1 365 1 352 3.41e-31 122
MS.gene044608.t1 MTR_8g031420 29.651 344 200 10 33 365 35 347 4.08e-31 122
MS.gene044608.t1 MTR_2g084585 28.736 348 200 12 32 363 29 344 7.51e-31 120
MS.gene044608.t1 MTR_1g082410 29.275 386 147 16 19 373 15 305 1.38e-30 119
MS.gene044608.t1 MTR_2g033930 29.659 381 220 18 3 369 5 351 1.79e-30 120
MS.gene044608.t1 MTR_3g052490 29.024 379 218 15 11 370 11 357 2.39e-30 119
MS.gene044608.t1 MTR_8g031390 28.446 341 207 10 33 365 37 348 5.34e-30 119
MS.gene044608.t1 MTR_2g044100 26.842 380 236 12 5 368 11 364 1.38e-29 118
MS.gene044608.t1 MTR_4g056160 27.225 382 221 12 1 363 1 344 1.82e-29 117
MS.gene044608.t1 MTR_8g079050 28.906 384 214 16 7 365 11 360 7.07e-29 115
MS.gene044608.t1 MTR_1g025720 28.338 367 215 13 6 354 5 341 2.38e-28 114
MS.gene044608.t1 MTR_2g015590 29.703 303 187 9 25 314 24 313 3.78e-28 113
MS.gene044608.t1 MTR_4g122200 27.461 386 217 13 3 369 15 356 4.45e-28 113
MS.gene044608.t1 MTR_8g022810 26.842 380 234 10 1 366 10 359 6.53e-28 113
MS.gene044608.t1 MTR_8g031400 27.957 372 231 9 3 365 6 349 2.32e-27 111
MS.gene044608.t1 MTR_5g009100 28.286 350 211 13 37 374 50 371 2.55e-27 111
MS.gene044608.t1 MTR_2g033920 29.345 351 219 10 26 369 28 356 3.51e-27 111
MS.gene044608.t1 MTR_5g093090 28.177 362 202 13 32 370 27 353 1.04e-26 109
MS.gene044608.t1 MTR_1g025700 27.128 376 230 13 4 363 16 363 1.95e-26 108
MS.gene044608.t1 MTR_1g024890 29.513 349 200 14 33 366 32 349 3.59e-26 108
MS.gene044608.t1 MTR_3g098270 28.926 363 211 11 20 365 21 353 3.71e-26 108
MS.gene044608.t1 MTR_4g056280 26.738 374 228 13 3 363 4 344 4.87e-26 107
MS.gene044608.t1 MTR_8g022790 30.086 349 190 9 33 366 37 346 5.67e-26 107
MS.gene044608.t1 MTR_3g114090 27.200 375 227 12 7 363 4 350 6.30e-26 107
MS.gene044608.t1 MTR_1g025760 26.374 364 224 12 4 353 51 384 1.86e-25 106
MS.gene044608.t1 MTR_4g087985 26.613 372 220 14 13 361 16 357 3.57e-25 105
MS.gene044608.t1 MTR_2g043990 32.203 295 147 10 8 288 71 326 4.17e-25 104
MS.gene044608.t1 MTR_8g087890 27.966 354 216 11 32 374 30 355 5.56e-25 104
MS.gene044608.t1 MTR_1g025680 28.107 338 201 12 30 354 31 339 8.46e-25 105
MS.gene044608.t1 MTR_3g082830 27.666 347 213 11 28 363 33 352 9.69e-25 104
MS.gene044608.t1 MTR_0565s0010 26.629 353 223 10 32 374 31 357 1.29e-24 103
MS.gene044608.t1 MTR_3g005650 26.110 383 233 11 2 374 7 349 1.40e-24 103
MS.gene044608.t1 MTR_5g022630 26.781 351 217 11 32 369 42 365 2.86e-24 102
MS.gene044608.t1 MTR_5g084750 25.722 381 236 12 1 367 1 348 4.11e-24 102
MS.gene044608.t1 MTR_5g078210 28.571 371 213 15 14 367 6 341 6.29e-24 101
MS.gene044608.t1 MTR_8g031390 28.620 297 179 9 33 321 37 308 1.02e-23 100
MS.gene044608.t1 MTR_5g022640 25.066 379 234 12 7 369 20 364 1.14e-23 101
MS.gene044608.t1 MTR_5g084770 26.801 347 209 13 32 363 27 343 3.59e-23 99.8
MS.gene044608.t1 MTR_4g019880 27.297 381 215 17 6 366 13 351 6.84e-23 99.0
MS.gene044608.t1 MTR_2g461580 26.862 376 216 12 6 365 3 335 9.36e-23 98.6
MS.gene044608.t1 MTR_0009s0250 26.796 362 213 15 24 372 24 346 9.71e-23 98.2
MS.gene044608.t1 MTR_3g464730 25.737 373 231 13 6 364 4 344 1.80e-22 97.4
MS.gene044608.t1 MTR_8g075230 27.887 355 206 13 32 369 35 356 1.91e-22 97.8
MS.gene044608.t1 MTR_8g012520 32.716 162 55 3 169 310 7 134 2.26e-22 92.4
MS.gene044608.t1 MTR_3g435540 27.746 346 196 12 37 363 27 337 2.94e-22 97.1
MS.gene044608.t1 MTR_3g024510 26.420 352 224 9 32 374 37 362 3.67e-22 97.1
MS.gene044608.t1 MTR_1g079540 28.409 352 200 15 33 366 31 348 4.66e-22 96.7
MS.gene044608.t1 MTR_7g116520 27.366 391 221 16 3 374 12 358 5.42e-22 96.7
MS.gene044608.t1 MTR_8g074560 25.849 383 225 14 7 365 5 352 7.73e-22 95.9
MS.gene044608.t1 MTR_3g021460 26.862 376 216 13 6 365 3 335 8.90e-22 95.5
MS.gene044608.t1 MTR_4g035353 25.260 384 245 13 2 374 3 355 9.48e-22 95.9
MS.gene044608.t1 MTR_8g075220 26.912 353 211 13 30 364 37 360 1.45e-21 95.1
MS.gene044608.t1 MTR_5g087690 24.926 337 217 8 31 360 48 355 1.63e-21 95.1
MS.gene044608.t1 MTR_1g069175 27.344 384 225 15 8 374 13 359 1.68e-21 95.1
MS.gene044608.t1 MTR_7g116500 28.329 353 199 14 33 366 33 350 1.69e-21 95.1
MS.gene044608.t1 MTR_8g087870 26.053 380 227 14 6 374 7 343 2.83e-21 94.4
MS.gene044608.t1 MTR_3g023220 25.294 340 195 12 32 356 32 327 2.95e-21 94.4
MS.gene044608.t1 MTR_1g025780 25.668 374 238 12 1 363 9 353 5.94e-21 93.6
MS.gene044608.t1 MTR_5g084790 25.788 349 217 11 28 363 27 346 7.00e-21 93.2
MS.gene044608.t1 MTR_4g108690 26.590 346 200 11 37 363 31 341 9.04e-21 92.8
MS.gene044608.t1 MTR_2g015080 25.886 367 220 16 13 356 17 354 9.23e-21 92.8
MS.gene044608.t1 MTR_3g005660 26.158 367 234 11 6 359 7 349 1.17e-20 92.8
MS.gene044608.t1 MTR_8g075200 25.401 374 219 13 30 381 38 373 1.47e-20 92.8
MS.gene044608.t1 MTR_1g025910 27.078 373 224 15 5 363 10 348 3.31e-20 91.7
MS.gene044608.t1 MTR_5g074210 31.579 152 90 2 208 359 64 201 4.20e-20 88.2
MS.gene044608.t1 MTR_8g022810 31.148 244 134 8 1 230 10 233 5.37e-20 90.1
MS.gene044608.t1 MTR_7g116570 24.468 376 235 12 6 366 10 351 7.74e-20 90.5
MS.gene044608.t1 MTR_2g017875 24.646 353 219 13 32 372 33 350 2.01e-18 86.3
MS.gene044608.t1 MTR_5g093090 28.344 314 171 13 7 300 11 290 2.03e-18 85.5
MS.gene044608.t1 MTR_8g074570 25.260 384 219 14 9 365 14 356 2.24e-18 86.3
MS.gene044608.t1 MTR_1g030262 59.649 57 23 0 25 81 28 84 6.34e-18 78.6
MS.gene044608.t1 MTR_3g114120 25.648 347 219 11 28 363 42 360 1.01e-17 84.0
MS.gene044608.t1 MTR_6g021530 25.723 346 210 13 37 366 33 347 1.21e-17 84.0
MS.gene044608.t1 MTR_1g092690 23.795 332 206 11 34 357 52 344 3.61e-17 82.4
MS.gene044608.t1 MTR_2g017965 25.926 351 192 12 32 359 32 337 9.25e-17 81.3
MS.gene044608.t1 MTR_5g078210 27.190 331 198 14 14 326 6 311 1.68e-16 80.1
MS.gene044608.t1 MTR_1g060490 26.012 346 200 14 24 354 26 330 1.75e-16 80.1
MS.gene044608.t1 MTR_1g092740 24.269 342 205 11 34 362 39 339 3.63e-16 79.3
MS.gene044608.t1 MTR_2g017955 25.405 370 224 13 5 362 10 339 4.15e-16 79.3
MS.gene044608.t1 MTR_2g033920 28.169 284 183 8 26 302 28 297 2.91e-15 76.3
MS.gene044608.t1 MTR_1108s0010 29.677 155 95 3 209 363 63 203 3.81e-15 74.3
MS.gene044608.t1 MTR_1g079530 27.731 357 205 18 33 374 29 347 6.63e-15 75.9
MS.gene044608.t1 MTR_2g058390 44.444 63 34 1 166 227 7 69 3.54e-14 67.4
MS.gene044608.t1 MTR_5g083040 23.964 338 221 11 26 349 22 337 3.74e-14 73.6
MS.gene044608.t1 MTR_7g008060 23.947 380 232 13 1 366 1 337 1.40e-13 71.6
MS.gene044608.t1 MTR_8g012460 44.737 76 38 3 185 259 39 111 4.40e-13 65.5
MS.gene044608.t1 MTR_1g060500 24.251 334 207 12 34 354 41 341 5.45e-13 70.1
MS.gene044608.t1 MTR_8g074580 25.845 414 222 13 8 365 19 403 1.27e-12 69.3
MS.gene044608.t1 MTR_0127s0040 23.113 212 138 4 157 361 26 219 2.15e-11 63.9
MS.gene044608.t1 MTR_4g036385 32.174 115 70 3 249 363 22 128 4.62e-11 60.5
MS.gene044608.t1 MTR_6g049230 35.922 103 56 2 209 309 73 167 5.18e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044608.t1 AT5G14450 67.632 380 122 1 3 381 10 389 0.0 546
MS.gene044608.t1 AT3G26430 48.187 386 188 7 1 380 1 380 8.04e-125 365
MS.gene044608.t1 AT3G27950 49.722 360 170 4 21 378 20 370 5.76e-122 357
MS.gene044608.t1 AT1G67830 50.437 343 160 6 29 365 26 364 5.98e-113 334
MS.gene044608.t1 AT1G54790 41.398 372 199 8 5 370 11 369 1.61e-94 288
MS.gene044608.t1 AT1G54790 39.623 371 208 8 6 370 8 368 3.70e-90 276
MS.gene044608.t1 AT1G56670 40.838 382 193 10 11 380 13 373 1.37e-89 275
MS.gene044608.t1 AT4G01130 40.909 352 193 5 27 370 28 372 2.35e-87 269
MS.gene044608.t1 AT1G09390 42.286 350 172 10 32 373 36 363 1.98e-86 266
MS.gene044608.t1 AT1G54790 37.028 397 208 9 6 370 8 394 2.11e-84 263
MS.gene044608.t1 AT3G05180 39.943 353 194 10 31 374 34 377 2.16e-80 251
MS.gene044608.t1 AT3G62280 40.000 350 180 7 32 374 35 361 4.53e-77 242
MS.gene044608.t1 AT1G56670 42.282 298 151 8 11 300 13 297 2.02e-69 220
MS.gene044608.t1 AT4G01130 42.446 278 149 4 27 300 28 298 8.67e-69 220
MS.gene044608.t1 AT4G01130 37.201 293 169 5 86 370 1 286 9.77e-62 201
MS.gene044608.t1 AT3G62280 40.794 277 144 6 32 304 35 295 2.85e-59 194
MS.gene044608.t1 AT1G28600 33.159 383 221 13 13 380 10 372 2.20e-51 176
MS.gene044608.t1 AT5G45910 32.405 395 218 14 1 371 1 370 2.66e-51 176
MS.gene044608.t1 AT1G28580 32.353 374 228 11 8 370 12 371 3.20e-48 168
MS.gene044608.t1 AT1G28610 30.769 377 223 11 12 371 10 365 8.53e-47 164
MS.gene044608.t1 AT1G28650 32.558 387 223 14 3 371 6 372 1.67e-46 163
MS.gene044608.t1 AT1G28570 31.926 379 224 13 8 370 8 368 1.29e-45 161
MS.gene044608.t1 AT1G31550 31.063 367 218 11 20 370 22 369 1.44e-45 161
MS.gene044608.t1 AT2G27360 30.133 375 236 11 8 370 8 368 7.11e-45 159
MS.gene044608.t1 AT1G28640 31.522 368 214 11 22 371 23 370 4.09e-44 157
MS.gene044608.t1 AT1G31550 30.790 367 216 12 20 370 22 366 1.43e-43 155
MS.gene044608.t1 AT1G28590 29.600 375 229 10 12 370 15 370 2.81e-42 152
MS.gene044608.t1 AT1G28670 30.667 375 213 12 20 371 21 371 5.01e-40 146
MS.gene044608.t1 AT1G28660 31.148 366 218 12 22 371 23 370 2.11e-39 144
MS.gene044608.t1 AT3G48460 29.477 363 203 12 31 370 36 368 7.08e-39 143
MS.gene044608.t1 AT1G28660 31.319 364 219 12 22 371 23 369 1.83e-38 142
MS.gene044608.t1 AT5G03820 27.807 374 224 14 6 363 6 349 1.30e-31 123
MS.gene044608.t1 AT5G22810 29.032 372 220 14 6 363 10 351 1.62e-31 122
MS.gene044608.t1 AT5G03820 28.342 374 222 15 6 363 34 377 3.21e-31 122
MS.gene044608.t1 AT1G28580 30.640 297 187 9 79 370 8 290 5.94e-31 120
MS.gene044608.t1 AT2G23540 28.941 387 217 15 6 365 16 371 8.46e-31 121
MS.gene044608.t1 AT5G03810 26.882 372 229 12 6 363 3 345 9.71e-31 120
MS.gene044608.t1 AT5G08460 29.121 364 213 13 23 369 38 373 1.17e-30 121
MS.gene044608.t1 AT3G50400 28.389 391 221 17 1 365 1 358 2.15e-30 120
MS.gene044608.t1 AT1G23500 29.598 348 201 12 26 365 28 339 8.18e-27 109
MS.gene044608.t1 AT4G10950 26.554 354 220 12 32 373 70 395 8.75e-27 110
MS.gene044608.t1 AT1G71120 27.019 359 205 13 25 365 23 342 1.94e-26 108
MS.gene044608.t1 AT4G26790 27.273 352 209 11 28 363 23 343 2.51e-26 108
MS.gene044608.t1 AT4G26790 27.273 352 209 11 28 363 23 343 2.51e-26 108
MS.gene044608.t1 AT1G20132 28.267 329 198 9 32 349 60 361 2.89e-26 108
MS.gene044608.t1 AT2G30220 26.260 377 234 10 1 362 1 348 3.46e-26 108
MS.gene044608.t1 AT5G63170 28.779 344 177 12 31 354 26 321 5.79e-26 107
MS.gene044608.t1 AT1G29670 27.895 380 230 12 5 374 10 355 6.68e-26 107
MS.gene044608.t1 AT2G30310 26.216 370 227 10 8 360 7 347 6.83e-26 107
MS.gene044608.t1 AT3G16370 28.977 352 205 16 32 368 29 350 7.71e-26 107
MS.gene044608.t1 AT5G40990 28.906 384 219 17 3 365 7 357 1.69e-25 106
MS.gene044608.t1 AT1G29670 27.895 380 230 12 5 374 78 423 2.26e-25 107
MS.gene044608.t1 AT3G53100 26.158 367 222 13 11 363 12 343 2.44e-25 105
MS.gene044608.t1 AT3G14820 27.851 377 223 14 1 363 1 342 4.25e-25 105
MS.gene044608.t1 AT1G59406 26.415 371 228 13 5 364 6 342 6.58e-25 104
MS.gene044608.t1 AT1G59030 26.415 371 228 13 5 364 6 342 6.58e-25 104
MS.gene044608.t1 AT1G58725 26.415 371 228 13 5 364 6 342 6.58e-25 104
MS.gene044608.t1 AT1G71691 26.361 349 213 8 32 368 54 370 7.93e-25 104
MS.gene044608.t1 AT5G42170 27.089 347 218 10 30 368 47 366 8.31e-25 104
MS.gene044608.t1 AT1G06990 26.453 344 198 12 31 354 35 343 1.59e-24 103
MS.gene044608.t1 AT5G15720 27.193 342 207 12 32 359 29 342 2.54e-24 103
MS.gene044608.t1 AT1G71250 26.629 353 213 10 32 369 40 361 4.34e-24 102
MS.gene044608.t1 AT1G73610 26.667 375 210 12 7 363 9 336 4.64e-24 102
MS.gene044608.t1 AT2G40250 25.266 376 241 9 6 367 9 358 2.03e-23 100
MS.gene044608.t1 AT4G10950 26.685 356 213 14 32 373 70 391 2.70e-23 100
MS.gene044608.t1 AT1G53920 26.301 346 213 12 33 365 48 364 2.86e-23 100
MS.gene044608.t1 AT2G19060 27.273 363 200 13 32 375 29 346 5.42e-23 99.0
MS.gene044608.t1 AT2G42990 26.536 358 221 13 17 360 10 339 1.09e-22 98.2
MS.gene044608.t1 AT2G31540 23.636 385 241 11 4 367 6 358 1.26e-22 98.2
MS.gene044608.t1 AT2G24560 24.324 370 234 11 8 360 7 347 1.36e-22 98.2
MS.gene044608.t1 AT1G53940 26.579 380 232 13 6 365 7 359 1.49e-22 98.2
MS.gene044608.t1 AT2G19050 27.762 353 199 12 32 370 30 340 2.54e-22 97.1
MS.gene044608.t1 AT1G58430 23.861 373 238 10 4 360 6 348 2.61e-22 97.4
MS.gene044608.t1 AT5G33370 27.035 344 207 13 37 366 34 347 4.87e-22 96.7
MS.gene044608.t1 AT5G03980 25.401 374 199 13 4 364 6 312 6.15e-22 95.9
MS.gene044608.t1 AT3G04290 26.455 378 219 17 7 366 10 346 8.38e-22 95.9
MS.gene044608.t1 AT1G29660 26.062 353 224 11 32 374 31 356 1.41e-21 95.5
MS.gene044608.t1 AT1G53990 25.722 381 231 13 3 365 2 348 2.15e-21 94.7
MS.gene044608.t1 AT1G28570 31.188 202 127 6 174 370 11 205 2.79e-21 91.7
MS.gene044608.t1 AT5G37690 30.058 346 188 17 35 362 29 338 3.02e-21 94.4
MS.gene044608.t1 AT3G14225 28.406 345 215 12 33 365 37 361 3.15e-21 94.4
MS.gene044608.t1 AT2G04570 26.074 349 216 13 32 367 27 346 4.03e-21 94.0
MS.gene044608.t1 AT3G14225 28.406 345 211 11 33 365 37 357 7.12e-21 93.6
MS.gene044608.t1 AT1G28570 31.188 202 127 6 174 370 102 296 7.12e-21 92.4
MS.gene044608.t1 AT1G58520 26.724 348 207 13 28 364 25 335 8.51e-21 92.8
MS.gene044608.t1 AT1G58525 26.724 348 207 13 28 364 25 335 8.51e-21 92.8
MS.gene044608.t1 AT1G20120 24.860 358 220 11 30 369 75 401 2.45e-20 92.0
MS.gene044608.t1 AT1G74460 27.697 343 200 13 37 363 27 337 2.62e-20 91.7
MS.gene044608.t1 AT5G45950 25.749 334 214 9 22 349 29 334 3.06e-20 91.3
MS.gene044608.t1 AT1G75900 25.937 347 214 11 31 364 41 357 4.69e-20 90.9
MS.gene044608.t1 AT1G75880 27.826 345 210 12 32 364 51 368 4.93e-20 90.9
MS.gene044608.t1 AT1G54030 26.393 341 182 13 34 358 53 340 1.10e-19 90.5
MS.gene044608.t1 AT2G03980 27.826 345 199 16 31 359 41 351 1.49e-19 89.4
MS.gene044608.t1 AT2G03980 27.826 345 199 16 31 359 41 351 1.49e-19 89.4
MS.gene044608.t1 AT2G03980 27.826 345 199 16 31 359 41 351 1.49e-19 89.4
MS.gene044608.t1 AT2G03980 27.826 345 199 16 31 359 41 351 1.49e-19 89.4
MS.gene044608.t1 AT1G28610 32.093 215 120 9 12 213 10 211 2.27e-19 87.0
MS.gene044608.t1 AT1G75920 24.737 380 230 15 5 371 7 343 2.51e-19 88.6
MS.gene044608.t1 AT5G18430 27.143 350 209 14 33 366 28 347 4.15e-19 88.2
MS.gene044608.t1 AT1G28600 31.373 204 122 7 13 207 10 204 4.94e-19 85.5
MS.gene044608.t1 AT1G75880 27.826 345 209 13 32 364 51 367 6.33e-19 87.8
MS.gene044608.t1 AT1G54000 25.424 354 212 13 33 374 36 349 1.76e-18 86.7
MS.gene044608.t1 AT2G19010 27.920 351 201 13 32 370 59 369 2.33e-18 86.3
MS.gene044608.t1 AT1G33811 25.806 341 216 10 32 359 33 349 3.39e-18 85.5
MS.gene044608.t1 AT2G19010 26.571 350 207 12 32 370 29 339 3.56e-18 85.1
MS.gene044608.t1 AT5G15720 26.962 293 181 11 32 310 29 302 3.59e-18 84.7
MS.gene044608.t1 AT5G03610 27.027 333 191 14 34 352 44 338 6.10e-18 84.7
MS.gene044608.t1 AT1G20130 26.036 338 215 11 30 354 201 516 1.34e-17 84.7
MS.gene044608.t1 AT1G75890 25.858 379 225 14 4 361 17 360 2.11e-17 83.2
MS.gene044608.t1 AT1G20130 26.036 338 215 11 30 354 181 496 2.36e-17 84.0
MS.gene044608.t1 AT1G75890 25.936 374 221 14 9 361 51 389 2.50e-17 83.2
MS.gene044608.t1 AT2G19050 27.206 272 155 9 32 289 30 272 2.76e-17 81.6
MS.gene044608.t1 AT1G71691 23.569 297 194 6 77 368 1 269 2.77e-17 81.6
MS.gene044608.t1 AT1G75910 25.641 351 204 14 30 363 25 335 3.50e-17 82.4
MS.gene044608.t1 AT5G15720 25.952 289 180 9 80 359 48 311 4.30e-17 82.0
MS.gene044608.t1 AT1G75890 25.789 380 237 14 4 361 17 373 4.52e-17 82.4
MS.gene044608.t1 AT1G75930 26.498 317 197 10 6 309 6 299 4.60e-17 82.0
MS.gene044608.t1 AT1G54020 25.220 341 203 13 33 363 33 331 5.18e-17 82.0
MS.gene044608.t1 AT5G45960 25.959 339 201 15 33 352 47 354 8.00e-17 81.6
MS.gene044608.t1 AT1G71691 25.979 281 173 7 32 300 54 311 9.79e-17 80.5
MS.gene044608.t1 AT5G37690 28.873 284 159 13 87 362 82 330 1.16e-16 80.9
MS.gene044608.t1 AT3G43550 27.010 311 191 13 1 300 1 286 1.82e-16 79.3
MS.gene044608.t1 AT4G30140 27.841 352 198 15 32 370 32 340 2.50e-16 79.7
MS.gene044608.t1 AT2G24560 24.771 327 206 11 8 314 7 313 4.89e-16 78.6
MS.gene044608.t1 AT1G75920 24.865 370 213 15 30 371 21 353 4.97e-16 79.0
MS.gene044608.t1 AT1G75920 25.000 324 193 14 53 363 21 307 5.96e-16 78.2
MS.gene044608.t1 AT2G31550 23.618 199 133 3 169 362 25 209 1.24e-15 75.9
MS.gene044608.t1 AT5G03600 27.217 327 188 14 32 349 13 298 2.10e-15 77.0
MS.gene044608.t1 AT3G14220 23.547 344 216 13 32 365 31 337 2.71e-15 77.0
MS.gene044608.t1 AT1G53940 28.028 289 166 11 6 275 7 272 3.49e-15 75.9
MS.gene044608.t1 AT5G03600 27.217 327 188 14 32 349 48 333 3.50e-15 76.6
MS.gene044608.t1 AT3G09930 27.052 329 197 13 34 352 40 335 5.50e-15 75.9
MS.gene044608.t1 AT3G09930 27.052 329 197 13 34 352 40 335 5.50e-15 75.9
MS.gene044608.t1 AT2G36325 25.872 344 201 15 34 363 48 351 1.50e-14 74.7
MS.gene044608.t1 AT1G54030 26.667 270 142 11 34 288 53 281 2.57e-13 70.5
MS.gene044608.t1 AT5G33370 26.978 278 168 12 37 300 34 290 3.81e-13 70.1
MS.gene044608.t1 AT3G14210 24.860 358 211 15 33 374 36 351 5.68e-13 70.1
MS.gene044608.t1 AT4G16230 26.562 256 138 11 5 241 11 235 1.79e-11 64.3

Find 85 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATATGGTGTGGGAATTT+AGG 0.220511 7.3:-66439381 MS.gene044608:CDS
AACAAGGAGGGAGGTCATTT+TGG 0.223386 7.3:-66440137 MS.gene044608:CDS
CCGGCATGGTTTCACGAATT+TGG 0.231772 7.3:+66440447 None:intergenic
ATTCGCCCCATGTCTATAAT+TGG 0.236600 7.3:+66440830 None:intergenic
CGATAACATGCTTGTAAAAT+TGG 0.254152 7.3:+66439213 None:intergenic
GTACATCGTGCTTGTAAAAT+AGG 0.257325 7.3:+66440076 None:intergenic
CTTTGACTGCAGAGGCTAAC+TGG 0.317589 7.3:+66440414 None:intergenic
CACTGTCCAATTCACCTTCT+AGG 0.325573 7.3:+66440679 None:intergenic
TTCAGATAAGCACTTAAATA+TGG 0.332768 7.3:+66440864 None:intergenic
GCTTGGTTCTTGCTTTGAAC+TGG 0.346920 7.3:+66440709 None:intergenic
ACTTCTTTCAAGTGAATTGT+TGG 0.351300 7.3:+66440565 None:intergenic
GCTTGTAAAATTGGTGTTGC+TGG 0.354554 7.3:+66439222 None:intergenic
GATGTTTATGCTGCAAAATA+TGG 0.354894 7.3:-66439922 MS.gene044608:CDS
GTTCCAATTCCTTCACCATA+TGG 0.367872 7.3:-66441851 MS.gene044608:CDS
TGACCATATGGTGAAGGAAT+TGG 0.369059 7.3:+66441848 None:intergenic
AACCCAATGGTTAGCAGCTT+CGG 0.369249 7.3:+66439278 None:intergenic
GCAAATGGAAAAGATGTATA+TGG 0.370662 7.3:-66439354 MS.gene044608:CDS
CGGCCCCATTGGATGTTTGC+CGG 0.370784 7.3:-66440103 MS.gene044608:CDS
TGTCTCATTCTGCTTCCTAA+TGG 0.371813 7.3:+66440788 None:intergenic
TGAATTCAACAAGAAGCTTA+AGG 0.382113 7.3:-66439998 MS.gene044608:CDS
GCACTCTACACGTTCGATAT+TGG 0.384305 7.3:-66440512 MS.gene044608:CDS
TCCCAACTCACATACATTGA+TGG 0.386362 7.3:+66439315 None:intergenic
AATGAGACAATATTTCAATA+TGG 0.396163 7.3:-66440774 MS.gene044608:CDS
CAACTGGTGGATCCACCATT+AGG 0.401702 7.3:-66440803 MS.gene044608:CDS
ACCAAGCAACTTTACCTAGA+AGG 0.405312 7.3:-66440693 MS.gene044608:intron
TTTCCTGCAATATACAACTT+TGG 0.407071 7.3:-66441914 MS.gene044608:CDS
GTCAAAATGATCTCTCTGTT+GGG 0.407663 7.3:-66440490 MS.gene044608:CDS
TCTCCAAAGTTGTATATTGC+AGG 0.411215 7.3:+66441911 None:intergenic
TACATATGTAATTGCAGCCT+CGG 0.424226 7.3:+66439945 None:intergenic
ATGTGAATGATACACATATA+TGG 0.437952 7.3:-66439395 MS.gene044608:CDS
ACCTTCTAGGTAAAGTTGCT+TGG 0.441672 7.3:+66440692 None:intergenic
GGTCAAAATGATCTCTCTGT+TGG 0.447482 7.3:-66440491 MS.gene044608:CDS
GCTAACTGGTTAACTATATC+CGG 0.449387 7.3:+66440428 None:intergenic
CAACACACTGCACACAAGAT+AGG 0.450814 7.3:+66441966 None:intergenic
ACCATCAATGTATGTGAGTT+GGG 0.452258 7.3:-66439316 MS.gene044608:CDS
CTCATTCTGCTTCCTAATGG+TGG 0.456669 7.3:+66440791 None:intergenic
TAGCCACAACAGATCTTCAT+TGG 0.459382 7.3:+66439420 None:intergenic
TGTCTCTACCAAAAGGTTTG+TGG 0.461301 7.3:+66441816 None:intergenic
ATGCCGAAGCTGCTAACCAT+TGG 0.468215 7.3:-66439281 MS.gene044608:CDS
AACCATCAATGTATGTGAGT+TGG 0.476901 7.3:-66439317 MS.gene044608:CDS
TGCCGAAGCTGCTAACCATT+GGG 0.486851 7.3:-66439280 MS.gene044608:CDS
ATACACAACACCGGCCCCAT+TGG 0.488219 7.3:-66440114 MS.gene044608:CDS
TTCACCGGCAAACATCCAAT+GGG 0.494059 7.3:+66440099 None:intergenic
GGGAATTTAGGAACAGCAAA+TGG 0.498658 7.3:-66439369 MS.gene044608:CDS
TCAACAAGAAGCTTAAGGAC+AGG 0.503947 7.3:-66439993 MS.gene044608:CDS
TTAGCGAACTCCTCGGGCAC+AGG 0.505353 7.3:+66440536 None:intergenic
ATTTGAATATCAAGAGAGAA+TGG 0.510430 7.3:+66440744 None:intergenic
CGTAAAAGATCAAAATATGA+TGG 0.510986 7.3:-66440025 MS.gene044608:CDS
AGTGCTTATCTGAATTCACT+TGG 0.521358 7.3:-66440855 MS.gene044608:CDS
CCATCACTGTCTCTACCAAA+AGG 0.532120 7.3:+66441809 None:intergenic
TGCTTGTAAAATAGGTTCAC+CGG 0.533640 7.3:+66440084 None:intergenic
AGTGCCTTAGCGAACTCCTC+GGG 0.543522 7.3:+66440530 None:intergenic
CGGCAAACATCCAATGGGGC+CGG 0.546560 7.3:+66440104 None:intergenic
CTTGTAAAATTGGTGTTGCT+GGG 0.550420 7.3:+66439223 None:intergenic
CAACAAGAAGCTTAAGGACA+GGG 0.551832 7.3:-66439992 MS.gene044608:CDS
ACATATGTAATTGCAGCCTC+GGG 0.556326 7.3:+66439946 None:intergenic
CTTGGAACCAATTATAGACA+TGG 0.557960 7.3:-66440837 MS.gene044608:CDS
TACAAGCACGATGTACCAGC+TGG 0.559249 7.3:-66440069 MS.gene044608:CDS
GTTCACCGGCAAACATCCAA+TGG 0.572369 7.3:+66440098 None:intergenic
GGAGACTCAAACTCAGACAC+TGG 0.576619 7.3:-66441893 MS.gene044608:CDS
CCAAATTCGTGAAACCATGC+CGG 0.581203 7.3:-66440447 MS.gene044608:CDS
CTGGTTAACTATATCCGGCA+TGG 0.589293 7.3:+66440433 None:intergenic
ATTCCTTCACCATATGGTCA+AGG 0.594289 7.3:-66441845 MS.gene044608:CDS
GAGTGCCTTAGCGAACTCCT+CGG 0.597821 7.3:+66440529 None:intergenic
AAGCCTTGACCATATGGTGA+AGG 0.598287 7.3:+66441842 None:intergenic
GTTGCTGATCGAATACTCAA+TGG 0.612695 7.3:-66439258 MS.gene044608:CDS
ATGATACACATATATGGTGT+GGG 0.613124 7.3:-66439389 MS.gene044608:CDS
TATTGCAGGAAAAGCACAAG+AGG 0.614430 7.3:+66441925 None:intergenic
TTGGAACCAATTATAGACAT+GGG 0.615493 7.3:-66440836 MS.gene044608:CDS
TACGGGTCAAAATAGCCAGC+TGG 0.620364 7.3:+66440054 None:intergenic
GCTACTTACTTTGACTGCAG+AGG 0.621603 7.3:+66440406 None:intergenic
TCAATGTATGTGAGTTGGGA+TGG 0.626162 7.3:-66439312 MS.gene044608:CDS
TGTGCCCGAGGAGTTCGCTA+AGG 0.630547 7.3:-66440534 MS.gene044608:CDS
AAGTAAGCTTCCTGTGCCCG+AGG 0.634760 7.3:-66440546 MS.gene044608:CDS
GTATTCGATCAGCAACCCAA+TGG 0.641329 7.3:+66439265 None:intergenic
AGAATATATACGAACAAGGA+GGG 0.642628 7.3:-66440149 MS.gene044608:CDS
AATGATACACATATATGGTG+TGG 0.656371 7.3:-66439390 MS.gene044608:CDS
GACTCAAACTCAGACACTGG+TGG 0.659054 7.3:-66441890 MS.gene044608:CDS
CAGAATATATACGAACAAGG+AGG 0.667877 7.3:-66440150 MS.gene044608:CDS
GCTGAGAACAGAACTTCCCG+AGG 0.676539 7.3:-66439962 MS.gene044608:CDS
TTGCAGAATATATACGAACA+AGG 0.685260 7.3:-66440153 MS.gene044608:intron
TGGAACCAATTATAGACATG+GGG 0.695667 7.3:-66440835 MS.gene044608:CDS
GATCCAATGAAGATCTGTTG+TGG 0.699731 7.3:-66439423 MS.gene044608:CDS
ATATATACGAACAAGGAGGG+AGG 0.707854 7.3:-66440146 MS.gene044608:CDS
TCACCGGCAAACATCCAATG+GGG 0.735990 7.3:+66440100 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAAAAAAAATATTGT+TGG + chr7.3:66441632-66441651 None:intergenic 10.0%
!!! AAATTTTACTTTTATTTTCA+GGG - chr7.3:66441758-66441777 MS.gene044608:intron 10.0%
!!! ATTATAAATATGACAATTTT+GGG - chr7.3:66439661-66439680 MS.gene044608:intron 10.0%
!!! ATTTTCAGTTAAAAAAAAAA+TGG + chr7.3:66439691-66439710 None:intergenic 10.0%
!!! TATTATAAATATGACAATTT+TGG - chr7.3:66439660-66439679 MS.gene044608:intron 10.0%
!!! TTTTTAACTGAAAATAAAAA+TGG - chr7.3:66439696-66439715 MS.gene044608:intron 10.0%
!! ATATGAAATAAAATAAACTC+TGG + chr7.3:66440565-66440584 None:intergenic 15.0%
!! ATATTTAAACAATCAATTTC+AGG + chr7.3:66440173-66440192 None:intergenic 15.0%
!!! AAAATTACTTTTCTTACTTA+TGG - chr7.3:66441534-66441553 MS.gene044608:intron 15.0%
!!! ATTTGATACTATCTATTTTA+TGG - chr7.3:66439981-66440000 MS.gene044608:CDS 15.0%
!!! GAAATTTTACTTTTATTTTC+AGG - chr7.3:66441757-66441776 MS.gene044608:intron 15.0%
!!! TACTTTAAGAAGTATTTTAT+TGG + chr7.3:66440860-66440879 None:intergenic 15.0%
!!! TATATTTTCATAATCTTTCT+AGG - chr7.3:66439916-66439935 MS.gene044608:CDS 15.0%
!! AATGAGACAATATTTCAATA+TGG - chr7.3:66440436-66440455 MS.gene044608:CDS 20.0%
!! ACATTAAATAAAAGGAATGT+TGG + chr7.3:66440595-66440614 None:intergenic 20.0%
!! CTTAAAATTAAATACTTGTG+AGG - chr7.3:66439488-66439507 MS.gene044608:intron 20.0%
!! TCAGTTAAAAAAAAAATGGA+GGG + chr7.3:66439687-66439706 None:intergenic 20.0%
!! TTCAGTTAAAAAAAAAATGG+AGG + chr7.3:66439688-66439707 None:intergenic 20.0%
!!! AAAACCAAAGTTTTAAATCA+TGG - chr7.3:66441393-66441412 MS.gene044608:intron 20.0%
!!! ACTGTCAAATTTTAAAATAG+AGG - chr7.3:66439836-66439855 MS.gene044608:intron 20.0%
!!! ATCAATAAACTAGAAGTATA+TGG - chr7.3:66440191-66440210 MS.gene044608:intron 20.0%
!!! CAATCTTTAAAAATAGGTAT+AGG + chr7.3:66441661-66441680 None:intergenic 20.0%
!!! CTGTCAAATTTTAAAATAGA+GGG - chr7.3:66439837-66439856 MS.gene044608:intron 20.0%
!!! TAATTTTCCTTATATTGTGA+GGG + chr7.3:66441521-66441540 None:intergenic 20.0%
!!! TTCCTTTTATTTAATGTGTT+TGG - chr7.3:66440598-66440617 MS.gene044608:intron 20.0%
! ATGTAATGAAAAAGAAACAC+TGG - chr7.3:66441689-66441708 MS.gene044608:intron 25.0%
! ATGTGAATGATACACATATA+TGG - chr7.3:66441815-66441834 MS.gene044608:CDS 25.0%
! ATTTGAATATCAAGAGAGAA+TGG + chr7.3:66440469-66440488 None:intergenic 25.0%
! CATAAGTTTAATACCTTTGT+TGG - chr7.3:66440098-66440117 MS.gene044608:CDS 25.0%
! CGTAAAAGATCAAAATATGA+TGG - chr7.3:66441185-66441204 MS.gene044608:intron 25.0%
! GACCAAACACATTAAATAAA+AGG + chr7.3:66440603-66440622 None:intergenic 25.0%
! TTCAGATAAGCACTTAAATA+TGG + chr7.3:66440349-66440368 None:intergenic 25.0%
!! AAACTAGAAGTATATGGTTA+TGG - chr7.3:66440197-66440216 MS.gene044608:intron 25.0%
!! ATTTTCACCATTATCAGATT+TGG - chr7.3:66439633-66439652 MS.gene044608:intron 25.0%
!! CAATTTTACAAGCATGTTAT+CGG - chr7.3:66441998-66442017 MS.gene044608:CDS 25.0%
!! CCATGTTACTTAAAACATAT+CGG + chr7.3:66439726-66439745 None:intergenic 25.0%
!! GTAATTTTCCTTATATTGTG+AGG + chr7.3:66441522-66441541 None:intergenic 25.0%
!! TTTTGCAATATCAAGAATCA+CGG + chr7.3:66441424-66441443 None:intergenic 25.0%
!!! CAAAGTTTTAAATCATGGTT+GGG - chr7.3:66441398-66441417 MS.gene044608:intron 25.0%
!!! GAAGTATTTTATTGGAACAT+TGG + chr7.3:66440852-66440871 None:intergenic 25.0%
AACTACTAAGTAAAATGAGC+CGG - chr7.3:66440241-66440260 MS.gene044608:intron 30.0%
AATGATACACATATATGGTG+TGG - chr7.3:66441820-66441839 MS.gene044608:CDS 30.0%
AGAATATATACGAACAAGGA+GGG - chr7.3:66441061-66441080 MS.gene044608:intron 30.0%
ATAGAGACCAAATCTGATAA+TGG + chr7.3:66439643-66439662 None:intergenic 30.0%
ATCAGCAATACGAAAAATGA+AGG - chr7.3:66441315-66441334 MS.gene044608:intron 30.0%
ATGATACACATATATGGTGT+GGG - chr7.3:66441821-66441840 MS.gene044608:CDS 30.0%
ATTCTTATAAACTCGTTTCC+AGG + chr7.3:66441491-66441510 None:intergenic 30.0%
CGATAACATGCTTGTAAAAT+TGG + chr7.3:66442000-66442019 None:intergenic 30.0%
CGATTGTAGAGTTTAATAAC+CGG - chr7.3:66440146-66440165 MS.gene044608:CDS 30.0%
CGGTTATTAAACTCTACAAT+CGG + chr7.3:66440148-66440167 None:intergenic 30.0%
CTTATGCCTCAATATATATC+AGG + chr7.3:66440084-66440103 None:intergenic 30.0%
GATGTTTATGCTGCAAAATA+TGG - chr7.3:66441288-66441307 MS.gene044608:intron 30.0%
GCAAATGGAAAAGATGTATA+TGG - chr7.3:66441856-66441875 MS.gene044608:CDS 30.0%
GCCAAACTTAAAATAGCTTA+TGG + chr7.3:66439590-66439609 None:intergenic 30.0%
TAAACAATCAATTTCAGGAC+CGG + chr7.3:66440168-66440187 None:intergenic 30.0%
TGAATTCAACAAGAAGCTTA+AGG - chr7.3:66441212-66441231 MS.gene044608:intron 30.0%
TTGCAGAATATATACGAACA+AGG - chr7.3:66441057-66441076 MS.gene044608:intron 30.0%
TTGGAACCAATTATAGACAT+GGG - chr7.3:66440374-66440393 MS.gene044608:intron 30.0%
TTTCCTGCAATATACAACTT+TGG - chr7.3:66439296-66439315 MS.gene044608:CDS 30.0%
! ACATGTTATTCCCAACTTTT+CGG + chr7.3:66440910-66440929 None:intergenic 30.0%
! ACTTCTTTCAAGTGAATTGT+TGG + chr7.3:66440648-66440667 None:intergenic 30.0%
! CCAACCATGATTTAAAACTT+TGG + chr7.3:66441400-66441419 None:intergenic 30.0%
! CCAGCTCAATCTTTAAAAAT+AGG + chr7.3:66441667-66441686 None:intergenic 30.0%
! GCTCATTTTACTTAGTAGTT+AGG + chr7.3:66440241-66440260 None:intergenic 30.0%
! TCCTTATTCTCACAATTTTG+CGG + chr7.3:66439870-66439889 None:intergenic 30.0%
! TGAAAACTTAGTTGCAGTTT+TGG + chr7.3:66439894-66439913 None:intergenic 30.0%
!! CCATTCTTTAAAACACTTAC+TGG - chr7.3:66441003-66441022 MS.gene044608:intron 30.0%
!! CCGATATGTTTTAAGTAACA+TGG - chr7.3:66439723-66439742 MS.gene044608:intron 30.0%
!! CGTGTCATTCTTGATTTTAT+AGG - chr7.3:66439425-66439444 MS.gene044608:CDS 30.0%
!! CTTTAAAACACTTACTGGAA+TGG - chr7.3:66441008-66441027 MS.gene044608:intron 30.0%
!!! ACTTTTATTTTCAGGGTTTG+TGG - chr7.3:66441765-66441784 MS.gene044608:intron 30.0%
!!! CCAAAGTTTTAAATCATGGT+TGG - chr7.3:66441397-66441416 MS.gene044608:intron 30.0%
!!! CCAGTAAGTGTTTTAAAGAA+TGG + chr7.3:66441006-66441025 None:intergenic 30.0%
!!! CCTATTTTTAAAGATTGAGC+TGG - chr7.3:66441664-66441683 MS.gene044608:intron 30.0%
!!! GCCATAAGCTATTTTAAGTT+TGG - chr7.3:66439586-66439605 MS.gene044608:intron 30.0%
AACCATCAATGTATGTGAGT+TGG - chr7.3:66441893-66441912 MS.gene044608:CDS 35.0%
ACCATCAATGTATGTGAGTT+GGG - chr7.3:66441894-66441913 MS.gene044608:CDS 35.0%
ACTACTAAGTAAAATGAGCC+GGG - chr7.3:66440242-66440261 MS.gene044608:intron 35.0%
ACTTTACCTAGAAGGTGAAT+TGG - chr7.3:66440525-66440544 MS.gene044608:CDS 35.0%
AGTGCTTATCTGAATTCACT+TGG - chr7.3:66440355-66440374 MS.gene044608:intron 35.0%
CAGAATATATACGAACAAGG+AGG - chr7.3:66441060-66441079 MS.gene044608:intron 35.0%
CATATATGGTGTGGGAATTT+AGG - chr7.3:66441829-66441848 MS.gene044608:CDS 35.0%
CATGGTAGATTATCTGATGA+TGG - chr7.3:66439741-66439760 MS.gene044608:intron 35.0%
CTTGGAACCAATTATAGACA+TGG - chr7.3:66440373-66440392 MS.gene044608:intron 35.0%
GCTAACTGGTTAACTATATC+CGG + chr7.3:66440785-66440804 None:intergenic 35.0%
GGAATAACATGTTCATTGTG+TGG - chr7.3:66440918-66440937 MS.gene044608:intron 35.0%
GTACATCGTGCTTGTAAAAT+AGG + chr7.3:66441137-66441156 None:intergenic 35.0%
GTCAAAATGATCTCTCTGTT+GGG - chr7.3:66440720-66440739 MS.gene044608:CDS 35.0%
TAAGCATCCCTCACAATATA+AGG - chr7.3:66441511-66441530 MS.gene044608:intron 35.0%
TACAACTTCTTTGCCAACAA+AGG + chr7.3:66440114-66440133 None:intergenic 35.0%
TACATATGTAATTGCAGCCT+CGG + chr7.3:66441268-66441287 None:intergenic 35.0%
TATTCTGCAATGAAGTTCAC+TGG + chr7.3:66441047-66441066 None:intergenic 35.0%
TCCGCAAAATTGTGAGAATA+AGG - chr7.3:66439866-66439885 MS.gene044608:intron 35.0%
TCTCCAAAGTTGTATATTGC+AGG + chr7.3:66439302-66439321 None:intergenic 35.0%
TGCTCATTCACTTATATCAG+CGG - chr7.3:66441560-66441579 MS.gene044608:intron 35.0%
TGCTTGTAAAATAGGTTCAC+CGG + chr7.3:66441129-66441148 None:intergenic 35.0%
TGGAACCAATTATAGACATG+GGG - chr7.3:66440375-66440394 MS.gene044608:intron 35.0%
TGTCATATCACCGTATTTGA+TGG - chr7.3:66439804-66439823 MS.gene044608:intron 35.0%
TTCAGATCCTCCATCAAATA+CGG + chr7.3:66439817-66439836 None:intergenic 35.0%
! ACTTTTGAACACCGAAAAGT+TGG - chr7.3:66440896-66440915 MS.gene044608:intron 35.0%
! CTTTTGAACACCGAAAAGTT+GGG - chr7.3:66440897-66440916 MS.gene044608:intron 35.0%
! GAAACTCGATATCTGAAATC+CGG - chr7.3:66440057-66440076 MS.gene044608:CDS 35.0%
! TCATTTTGGATACACAACAC+CGG - chr7.3:66441087-66441106 MS.gene044608:intron 35.0%
!! CTTGTAAAATTGGTGTTGCT+GGG + chr7.3:66441990-66442009 None:intergenic 35.0%
!! GTTTGGCTTAAATGCAGTTT+TGG - chr7.3:66439603-66439622 MS.gene044608:intron 35.0%
ACATATGTAATTGCAGCCTC+GGG + chr7.3:66441267-66441286 None:intergenic 40.0%
ACCAAGCAACTTTACCTAGA+AGG - chr7.3:66440517-66440536 MS.gene044608:CDS 40.0%
ACCTTCTAGGTAAAGTTGCT+TGG + chr7.3:66440521-66440540 None:intergenic 40.0%
ATATATACGAACAAGGAGGG+AGG - chr7.3:66441064-66441083 MS.gene044608:intron 40.0%
ATTCCTTCACCATATGGTCA+AGG - chr7.3:66439365-66439384 MS.gene044608:CDS 40.0%
ATTCGCCCCATGTCTATAAT+TGG + chr7.3:66440383-66440402 None:intergenic 40.0%
CAACAAGAAGCTTAAGGACA+GGG - chr7.3:66441218-66441237 MS.gene044608:intron 40.0%
CATATCACCGTATTTGATGG+AGG - chr7.3:66439807-66439826 MS.gene044608:intron 40.0%
CTACTAAGTAAAATGAGCCG+GGG - chr7.3:66440243-66440262 MS.gene044608:intron 40.0%
CTGATGCAGTCTCCAATATA+AGG - chr7.3:66441465-66441484 MS.gene044608:intron 40.0%
GATCCAATGAAGATCTGTTG+TGG - chr7.3:66441787-66441806 MS.gene044608:CDS 40.0%
GCCTCAATATATATCAGGAC+CGG + chr7.3:66440079-66440098 None:intergenic 40.0%
GGGAATTTAGGAACAGCAAA+TGG - chr7.3:66441841-66441860 MS.gene044608:CDS 40.0%
GGTCAAAATGATCTCTCTGT+TGG - chr7.3:66440719-66440738 MS.gene044608:CDS 40.0%
GTTCCAATTCCTTCACCATA+TGG - chr7.3:66439359-66439378 MS.gene044608:CDS 40.0%
GTTGCTGATCGAATACTCAA+TGG - chr7.3:66441952-66441971 MS.gene044608:CDS 40.0%
TAGCCACAACAGATCTTCAT+TGG + chr7.3:66441793-66441812 None:intergenic 40.0%
TCAACAAGAAGCTTAAGGAC+AGG - chr7.3:66441217-66441236 MS.gene044608:intron 40.0%
TCCCAACTCACATACATTGA+TGG + chr7.3:66441898-66441917 None:intergenic 40.0%
TCCGGTCCTGATATATATTG+AGG - chr7.3:66440075-66440094 MS.gene044608:CDS 40.0%
TGACCATATGGTGAAGGAAT+TGG + chr7.3:66439365-66439384 None:intergenic 40.0%
TGGAAAAAGCCTTGACCATA+TGG + chr7.3:66439377-66439396 None:intergenic 40.0%
TGTCTCATTCTGCTTCCTAA+TGG + chr7.3:66440425-66440444 None:intergenic 40.0%
TGTCTCTACCAAAAGGTTTG+TGG + chr7.3:66439397-66439416 None:intergenic 40.0%
! TATTGCAGGAAAAGCACAAG+AGG + chr7.3:66439288-66439307 None:intergenic 40.0%
! TCAATGTATGTGAGTTGGGA+TGG - chr7.3:66441898-66441917 MS.gene044608:CDS 40.0%
! TGATCTTTTACGCATCCGTA+CGG + chr7.3:66441177-66441196 None:intergenic 40.0%
!! GCTTGTAAAATTGGTGTTGC+TGG + chr7.3:66441991-66442010 None:intergenic 40.0%
!! GGCTTTTTCCACAAACCTTT+TGG - chr7.3:66439386-66439405 MS.gene044608:CDS 40.0%
!!! TTAGACTGGCTTTTGCTATG+TGG - chr7.3:66440274-66440293 MS.gene044608:intron 40.0%
AAAGTGTGGTAGAGGAGACA+AGG - chr7.3:66440955-66440974 MS.gene044608:intron 45.0%
AACCCAATGGTTAGCAGCTT+CGG + chr7.3:66441935-66441954 None:intergenic 45.0%
AAGCCTTGACCATATGGTGA+AGG + chr7.3:66439371-66439390 None:intergenic 45.0%
ACATGTTCATTGTGTGGCCT+CGG - chr7.3:66440924-66440943 MS.gene044608:intron 45.0%
CAACACACTGCACACAAGAT+AGG + chr7.3:66439247-66439266 None:intergenic 45.0%
CACTGTCCAATTCACCTTCT+AGG + chr7.3:66440534-66440553 None:intergenic 45.0%
CCAAATTCGTGAAACCATGC+CGG - chr7.3:66440763-66440782 MS.gene044608:CDS 45.0%
CCATCACTGTCTCTACCAAA+AGG + chr7.3:66439404-66439423 None:intergenic 45.0%
CTCATTCTGCTTCCTAATGG+TGG + chr7.3:66440422-66440441 None:intergenic 45.0%
CTGGTTAACTATATCCGGCA+TGG + chr7.3:66440780-66440799 None:intergenic 45.0%
GCACTCTACACGTTCGATAT+TGG - chr7.3:66440698-66440717 MS.gene044608:CDS 45.0%
GCTACTTACTTTGACTGCAG+AGG + chr7.3:66440807-66440826 None:intergenic 45.0%
GTATTCGATCAGCAACCCAA+TGG + chr7.3:66441948-66441967 None:intergenic 45.0%
TTCACCGGCAAACATCCAAT+GGG + chr7.3:66441114-66441133 None:intergenic 45.0%
! AACAAGGAGGGAGGTCATTT+TGG - chr7.3:66441073-66441092 MS.gene044608:intron 45.0%
! CCTTTTGGTAGAGACAGTGA+TGG - chr7.3:66439401-66439420 MS.gene044608:CDS 45.0%
! CTCGTTTCCAGGCCTTATAT+TGG + chr7.3:66441480-66441499 None:intergenic 45.0%
! GATCTTTTACGCATCCGTAC+GGG + chr7.3:66441176-66441195 None:intergenic 45.0%
! GCTTGGTTCTTGCTTTGAAC+TGG + chr7.3:66440504-66440523 None:intergenic 45.0%
!! TATAATTTATATAATACAAT+TGG - chr7.3:66439958-66439977 MS.gene044608:CDS 5.0%
ATGCCGAAGCTGCTAACCAT+TGG - chr7.3:66441929-66441948 MS.gene044608:CDS 50.0%
CCAGTCTAAACATAACGCCC+CGG + chr7.3:66440263-66440282 None:intergenic 50.0%
CCGGCATGGTTTCACGAATT+TGG + chr7.3:66440766-66440785 None:intergenic 50.0%
CTTTGACTGCAGAGGCTAAC+TGG + chr7.3:66440799-66440818 None:intergenic 50.0%
GACTCAAACTCAGACACTGG+TGG - chr7.3:66439320-66439339 MS.gene044608:CDS 50.0%
GCAGTCTCCAATATAAGGCC+TGG - chr7.3:66441470-66441489 MS.gene044608:intron 50.0%
GGAGACTCAAACTCAGACAC+TGG - chr7.3:66439317-66439336 MS.gene044608:CDS 50.0%
GTTCACCGGCAAACATCCAA+TGG + chr7.3:66441115-66441134 None:intergenic 50.0%
TACAAGCACGATGTACCAGC+TGG - chr7.3:66441141-66441160 MS.gene044608:intron 50.0%
TACGGGTCAAAATAGCCAGC+TGG + chr7.3:66441159-66441178 None:intergenic 50.0%
TAGCGGTCAAAGTGTGGTAG+AGG - chr7.3:66440947-66440966 MS.gene044608:intron 50.0%
TCACCGGCAAACATCCAATG+GGG + chr7.3:66441113-66441132 None:intergenic 50.0%
TGCCGAAGCTGCTAACCATT+GGG - chr7.3:66441930-66441949 MS.gene044608:CDS 50.0%
! CAACTGGTGGATCCACCATT+AGG - chr7.3:66440407-66440426 MS.gene044608:intron 50.0%
! CATGGGGCGAATTTTGCAAC+TGG - chr7.3:66440391-66440410 MS.gene044608:intron 50.0%
!!! GCTGGCTATTTTGACCCGTA+CGG - chr7.3:66441159-66441178 MS.gene044608:intron 50.0%
AAGTAAGCTTCCTGTGCCCG+AGG - chr7.3:66440664-66440683 MS.gene044608:intron 55.0%
AGTGCCTTAGCGAACTCCTC+GGG + chr7.3:66440683-66440702 None:intergenic 55.0%
ATACACAACACCGGCCCCAT+TGG - chr7.3:66441096-66441115 MS.gene044608:intron 55.0%
GAGTGCCTTAGCGAACTCCT+CGG + chr7.3:66440684-66440703 None:intergenic 55.0%
GCTGAGAACAGAACTTCCCG+AGG - chr7.3:66441248-66441267 MS.gene044608:intron 55.0%
TCATTGTGTGGCCTCGGTAG+CGG - chr7.3:66440930-66440949 MS.gene044608:intron 55.0%
! CCGGGGCGTTATGTTTAGAC+TGG - chr7.3:66440260-66440279 MS.gene044608:intron 55.0%
! GGGGCGAATTTTGCAACTGG+TGG - chr7.3:66440394-66440413 MS.gene044608:intron 55.0%
CCACACTTTGACCGCTACCG+AGG + chr7.3:66440944-66440963 None:intergenic 60.0%
CGGCAAACATCCAATGGGGC+CGG + chr7.3:66441109-66441128 None:intergenic 60.0%
CGGCCCCATTGGATGTTTGC+CGG - chr7.3:66441107-66441126 MS.gene044608:intron 60.0%
TGTGCCCGAGGAGTTCGCTA+AGG - chr7.3:66440676-66440695 MS.gene044608:intron 60.0%
TTAGCGAACTCCTCGGGCAC+AGG + chr7.3:66440677-66440696 None:intergenic 60.0%
! CCTCGGTAGCGGTCAAAGTG+TGG - chr7.3:66440941-66440960 MS.gene044608:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 66439206 66442026 66439206 ID=MS.gene044608
chr7.3 mRNA 66439206 66442026 66439206 ID=MS.gene044608.t1;Parent=MS.gene044608
chr7.3 exon 66441786 66442026 66441786 ID=MS.gene044608.t1.exon1;Parent=MS.gene044608.t1
chr7.3 CDS 66441786 66442026 66441786 ID=cds.MS.gene044608.t1;Parent=MS.gene044608.t1
chr7.3 exon 66440694 66440903 66440694 ID=MS.gene044608.t1.exon2;Parent=MS.gene044608.t1
chr7.3 CDS 66440694 66440903 66440694 ID=cds.MS.gene044608.t1;Parent=MS.gene044608.t1
chr7.3 exon 66440415 66440587 66440415 ID=MS.gene044608.t1.exon3;Parent=MS.gene044608.t1
chr7.3 CDS 66440415 66440587 66440415 ID=cds.MS.gene044608.t1;Parent=MS.gene044608.t1
chr7.3 exon 66439896 66440169 66439896 ID=MS.gene044608.t1.exon4;Parent=MS.gene044608.t1
chr7.3 CDS 66439896 66440169 66439896 ID=cds.MS.gene044608.t1;Parent=MS.gene044608.t1
chr7.3 exon 66439206 66439453 66439206 ID=MS.gene044608.t1.exon5;Parent=MS.gene044608.t1
chr7.3 CDS 66439206 66439453 66439206 ID=cds.MS.gene044608.t1;Parent=MS.gene044608.t1
Gene Sequence

>MS.gene044608

ATGGGGTTAAGTGTAGTGTTTGTTGTGTTCTTCTTCTTCCTATCTTGTGTGCAGTGTGTTGAACTCAAAGACTCATCATCCTCTTGTGCTTTTCCTGCAATATACAACTTTGGAGACTCAAACTCAGACACTGGTGGCATATCAGCTGCATTTGTTCCAATTCCTTCACCATATGGTCAAGGCTTTTTCCACAAACCTTTTGGTAGAGACAGTGATGGTCGTGTCATTCTTGATTTTATAGGTAAACTGTTTTTTTTTTACAACTTTTTGACACTATGTAAGCTTAAAATTAAATACTTGTGAGGCATTTAGATTGAACTATTTGAATTTATCTATGAACATAAGTAATTTGTTAGAAATAACTTATGAGTTATGACATAGCCATAAGCTATTTTAAGTTTGGCTTAAATGCAGTTTTGGTCTTCATATTTTCACCATTATCAGATTTGGTCTCTATTATAAATATGACAATTTTGGGCCCTCCATTTTTTTTTTAACTGAAAATAAAAATGGTGATCCGATATGTTTTAAGTAACATGGTAGATTATCTGATGATGGAAAAGATCAACGTTAATGAAATGACATTTCATTTAAAACATGTCATATCACCGTATTTGATGGAGGATCTGAACTGTCAAATTTTAAAATAGAGGGATCAATTCCGCAAAATTGTGAGAATAAGGAGCCAAAACTGCAACTAAGTTTTCAAGTATATTTTCATAATCTTTCTAGGATAATTTATGAAAACAGCTTATAATTTATATAATACAATTGGATTTGATACTATCTATTTTATGGCGATAGCGATATACAAATACTATATGCTTATGCTATGTGAACTGTTATTTTCTGAAACTCGATATCTGAAATCCGGTCCTGATATATATTGAGGCATAAGTTTAATACCTTTGTTGGCAAAGAAGTTGTAAGTAAACTAAACCGATTGTAGAGTTTAATAACCGGTCCTGAAATTGATTGTTTAAATATCAATAAACTAGAAGTATATGGTTATGGATGTCGTTAAGCGCAGAACCTAACTACTAAGTAAAATGAGCCGGGGCGTTATGTTTAGACTGGCTTTTGCTATGTGGATTTAATTAAGCTTTGTATTCAAATTGTGCAGCTGAGAAGCTAAAGTTGCCATATTTAAGTGCTTATCTGAATTCACTTGGAACCAATTATAGACATGGGGCGAATTTTGCAACTGGTGGATCCACCATTAGGAAGCAGAATGAGACAATATTTCAATATGGAATAAGTCCATTCTCTCTTGATATTCAAATTGTGCAGTTCAACCAGTTCAAAGCAAGAACCAAGCAACTTTACCTAGAAGGTGAATTGGACAGTGCTATGATTCCAGAGTTTATTTTATTTCATATCTTATAACCAACATTCCTTTTATTTAATGTGTTTGGTCTTTGTTTGTTTGAAAATTTTAGCCAACAATTCACTTGAAAGAAGTAAGCTTCCTGTGCCCGAGGAGTTCGCTAAGGCACTCTACACGTTCGATATTGGTCAAAATGATCTCTCTGTTGGGTTTAGAAAGATGAATTTTGACCAAATTCGTGAAACCATGCCGGATATAGTTAACCAGTTAGCCTCTGCAGTCAAAGTAAGTAGCACTTGTGTGTCTCTACTCTATACCAATGTTCCAATAAAATACTTCTTAAAGTAGTTGTAATTAACTGTGACTTTTGAACACCGAAAAGTTGGGAATAACATGTTCATTGTGTGGCCTCGGTAGCGGTCAAAGTGTGGTAGAGGAGACAAGGAAAATCTTGATGTCACACTCACAGACCATTCTTTAAAACACTTACTGGAATGGTTTTGAAATCTGACCAGTGAACTTCATTGCAGAATATATACGAACAAGGAGGGAGGTCATTTTGGATACACAACACCGGCCCCATTGGATGTTTGCCGGTGAACCTATTTTACAAGCACGATGTACCAGCTGGCTATTTTGACCCGTACGGATGCGTAAAAGATCAAAATATGATGGCTGTTGAATTCAACAAGAAGCTTAAGGACAGGGTTGTCAAGCTGAGAACAGAACTTCCCGAGGCTGCAATTACATATGTAGATGTTTATGCTGCAAAATATGGACTAATCAGCAATACGAAAAATGAAGGTAACTTGTTCATTATTGACATGAATCACTTCATCTACTAGATTCTTATATCATATAAAACCAAAGTTTTAAATCATGGTTGGGCCGTGATTCTTGATATTGCAAAAAAAGAATGTAGTCAAATGTGTCTGATGCAGTCTCCAATATAAGGCCTGGAAACGAGTTTATAAGAATTAAGCATCCCTCACAATATAAGGAAAATTACTTTTCTTACTTATGGAATTGCTCATTCACTTATATCAGCGGTAGTTAACTGTCACTGAAATTTTTTAATAACATACACAAAGACAAACCAACAATATTTTTTTTTTTCTTCATAATCCTATACCTATTTTTAAAGATTGAGCTGGAAATGTAATGAAAAAGAAACACTGGCATATGTGACTACACATTTTTTGTACATTTATCTCACATGCTAATGAAATTTTACTTTTATTTTCAGGGTTTGTGGATCCAATGAAGATCTGTTGTGGCTATCATGTGAATGATACACATATATGGTGTGGGAATTTAGGAACAGCAAATGGAAAAGATGTATATGGTACATCTTGTGAAAAACCATCAATGTATGTGAGTTGGGATGGTGTTCACTATGCCGAAGCTGCTAACCATTGGGTTGCTGATCGAATACTCAATGGCACTTTCACTGACCCAGCAACACCAATTTTACAAGCATGTTATCGGCATTAA
Protein sequence

>MS.gene044608.t1

MGLSVVFVVFFFFLSCVQCVELKDSSSSCAFPAIYNFGDSNSDTGGISAAFVPIPSPYGQGFFHKPFGRDSDGRVILDFIAEKLKLPYLSAYLNSLGTNYRHGANFATGGSTIRKQNETIFQYGISPFSLDIQIVQFNQFKARTKQLYLEANNSLERSKLPVPEEFAKALYTFDIGQNDLSVGFRKMNFDQIRETMPDIVNQLASAVKNIYEQGGRSFWIHNTGPIGCLPVNLFYKHDVPAGYFDPYGCVKDQNMMAVEFNKKLKDRVVKLRTELPEAAITYVDVYAAKYGLISNTKNEGFVDPMKICCGYHVNDTHIWCGNLGTANGKDVYGTSCEKPSMYVSWDGVHYAEAANHWVADRILNGTFTDPATPILQACYRH