Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045226.t1 | XP_024635745.1 | 99.2 | 365 | 3 | 0 | 1 | 365 | 1 | 365 | 5.00E-187 | 663.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045226.t1 | Q9FX53 | 69.5 | 334 | 63 | 5 | 66 | 364 | 76 | 405 | 4.8e-130 | 465.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045226.t1 | G7J2H9 | 92.8 | 390 | 3 | 1 | 1 | 365 | 1 | 390 | 5.3e-183 | 649.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene045226.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045226 | MS.gene067040 | PPI |
| MS.gene79125 | MS.gene045226 | PPI |
| MS.gene067040 | MS.gene045226 | PPI |
| MS.gene75566 | MS.gene045226 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045226.t1 | MTR_3g085960 | 93.077 | 390 | 2 | 1 | 1 | 365 | 1 | 390 | 0.0 | 745 |
| MS.gene045226.t1 | MTR_5g026540 | 36.364 | 121 | 69 | 3 | 50 | 168 | 19 | 133 | 1.92e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045226.t1 | AT1G13450 | 63.971 | 408 | 93 | 8 | 5 | 364 | 4 | 405 | 3.02e-173 | 488 |
| MS.gene045226.t1 | AT3G25990 | 63.003 | 373 | 92 | 3 | 21 | 364 | 16 | 371 | 1.50e-167 | 473 |
| MS.gene045226.t1 | AT1G13450 | 59.420 | 276 | 60 | 7 | 1 | 230 | 1 | 270 | 9.23e-94 | 281 |
| MS.gene045226.t1 | AT1G13450 | 59.420 | 276 | 60 | 7 | 1 | 230 | 1 | 270 | 9.23e-94 | 281 |
| MS.gene045226.t1 | AT1G13450 | 56.757 | 222 | 47 | 5 | 5 | 182 | 4 | 220 | 3.03e-65 | 207 |
| MS.gene045226.t1 | AT2G38250 | 43.878 | 98 | 43 | 2 | 40 | 137 | 17 | 102 | 1.63e-15 | 76.6 |
| MS.gene045226.t1 | AT5G01380 | 45.902 | 61 | 33 | 0 | 77 | 137 | 52 | 112 | 1.25e-11 | 65.5 |
Find 108 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCTAATTGCCTCCTTTA+TGG | 0.202289 | 3.3:+71687726 | None:intergenic |
| CAGGTTTCCGCGCGTTTCTT+TGG | 0.225470 | 3.3:+71691680 | None:intergenic |
| AAGCCATAAAGGAGGCAATT+AGG | 0.234916 | 3.3:-71687729 | MS.gene045226:CDS |
| GATGATGCCAACATTTCTTT+TGG | 0.253442 | 3.3:-71689401 | MS.gene045226:CDS |
| CGAAGTCGAATAAGCATCTT+TGG | 0.254316 | 3.3:-71691592 | MS.gene045226:CDS |
| CGACTATGTGTACTGATAAA+TGG | 0.279079 | 3.3:-71691523 | MS.gene045226:CDS |
| TCAACTCACGCCTCGGTATA+TGG | 0.284610 | 3.3:+71687203 | None:intergenic |
| CGAGGTGGTGGAAGTGGTTC+TGG | 0.294738 | 3.3:-71691458 | MS.gene045226:CDS |
| ATAGCATAGCTTACCATTTC+CGG | 0.308477 | 3.3:+71687921 | None:intergenic |
| TAAGAGAATTTGATGGTTAT+AGG | 0.317322 | 3.3:-71687260 | MS.gene045226:CDS |
| TGAGAACTAAACGTGCATTT+TGG | 0.331340 | 3.3:-71687693 | MS.gene045226:CDS |
| ATTGCCTCCTTTATGGCTTC+CGG | 0.339890 | 3.3:+71687733 | None:intergenic |
| TTATAGGAATATTGACAATA+TGG | 0.365204 | 3.3:-71687244 | MS.gene045226:CDS |
| CAAAGAAACGCGCGGAAACC+TGG | 0.365216 | 3.3:-71691679 | MS.gene045226:CDS |
| CTTCAGTATGCACAGGGATA+TGG | 0.367649 | 3.3:+71687346 | None:intergenic |
| ACTCAATCTTGAGAGAAGTT+TGG | 0.367954 | 3.3:-71688025 | MS.gene045226:CDS |
| GCGGAGTCCCTCCTTGGAAT+TGG | 0.368477 | 3.3:-71687954 | MS.gene045226:CDS |
| CTGGCACGTCGGGCTTGGAC+AGG | 0.391303 | 3.3:-71687285 | MS.gene045226:CDS |
| TGGTGGTGGTGTTGCGGCGG+TGG | 0.393366 | 3.3:+71691779 | None:intergenic |
| TGTTGCGGCGGTGGCGGTGG+TGG | 0.396652 | 3.3:+71691788 | None:intergenic |
| TAGCATAGCTTACCATTTCC+GGG | 0.400255 | 3.3:+71687922 | None:intergenic |
| TGCAACATCTGCTGCGGCAA+TGG | 0.406749 | 3.3:+71687981 | None:intergenic |
| AGCCATAAAGGAGGCAATTA+GGG | 0.407648 | 3.3:-71687728 | MS.gene045226:CDS |
| ATTGACCGTGACATGCCTAT+TGG | 0.408632 | 3.3:-71687640 | MS.gene045226:CDS |
| TGGTGTTGCGGCGGTGGCGG+TGG | 0.409366 | 3.3:+71691785 | None:intergenic |
| GAAGGGTTATATCAGTCAAA+TGG | 0.412587 | 3.3:-71687792 | MS.gene045226:CDS |
| TTCAGCGAAGATGAGAGAAA+AGG | 0.415899 | 3.3:-71691561 | MS.gene045226:CDS |
| GTCATATAGGCATACTTTGA+TGG | 0.420087 | 3.3:+71687377 | None:intergenic |
| TGGTGGTGTTGCGGCGGTGG+CGG | 0.425610 | 3.3:+71691782 | None:intergenic |
| TCTTCTTTGTAGAAATCGAT+TGG | 0.427495 | 3.3:+71691860 | None:intergenic |
| TGCGGCGGTGGCGGTGGTGG+TGG | 0.431040 | 3.3:+71691791 | None:intergenic |
| GACGAGACACGAAGCCTCAT+TGG | 0.438362 | 3.3:-71691650 | MS.gene045226:CDS |
| GGAGCTTTGATCTCCATCTC+AGG | 0.439885 | 3.3:+71691701 | None:intergenic |
| TCGTGTCTCGTCTTGAACCC+AGG | 0.453965 | 3.3:+71691661 | None:intergenic |
| GTTGTTGTTGAAGGTGGTGG+TGG | 0.455795 | 3.3:+71691765 | None:intergenic |
| TTTGCGGTTGTTGTTGTTGA+AGG | 0.456172 | 3.3:+71691756 | None:intergenic |
| TGGAGAGAAACTCCCGGAAA+TGG | 0.457751 | 3.3:-71687934 | MS.gene045226:intron |
| TGGCACTCCGGAAGCCATAA+AGG | 0.457915 | 3.3:-71687740 | MS.gene045226:CDS |
| AAGGGTTATATCAGTCAAAT+GGG | 0.461970 | 3.3:-71687791 | MS.gene045226:CDS |
| TGAAGAGTGTAATTTCCAAT+AGG | 0.462773 | 3.3:+71687625 | None:intergenic |
| TATGGTCAGACTCGTCATAT+AGG | 0.466782 | 3.3:+71687364 | None:intergenic |
| TCAGCGAAGATGAGAGAAAA+GGG | 0.467180 | 3.3:-71691560 | MS.gene045226:CDS |
| TACACTCTTCACCTTGATGA+AGG | 0.469365 | 3.3:-71687613 | MS.gene045226:intron |
| ATCTTCTCTTCAGTATGCAC+AGG | 0.472173 | 3.3:+71687339 | None:intergenic |
| CATGATCGAGGTGGTGGAAG+TGG | 0.472652 | 3.3:-71691464 | MS.gene045226:CDS |
| CAGCAAGCGGAGTCCCTCCT+TGG | 0.479134 | 3.3:-71687960 | MS.gene045226:CDS |
| CGGTGGTGGTGGTTGAAGAT+CGG | 0.482702 | 3.3:+71691802 | None:intergenic |
| CTTCTTTGTAGAAATCGATT+GGG | 0.484762 | 3.3:+71691861 | None:intergenic |
| TTCAAAGACATACCTTCAAC+GGG | 0.487539 | 3.3:+71689377 | None:intergenic |
| ACAGGTCTAAGAGAATTTGA+TGG | 0.489101 | 3.3:-71687267 | MS.gene045226:CDS |
| GTTGTTGTTGTTGAAGGTGG+TGG | 0.490511 | 3.3:+71691762 | None:intergenic |
| TATACCGAGGCGTGAGTTGA+GGG | 0.493005 | 3.3:-71687200 | None:intergenic |
| CATTGGTCTACGACGCGAGA+TGG | 0.494860 | 3.3:-71691633 | MS.gene045226:CDS |
| AGAAGCACGCGACATGATGA+TGG | 0.494994 | 3.3:-71691840 | MS.gene045226:CDS |
| ACAAGACGGATAGGTATTGA+TGG | 0.498257 | 3.3:-71687760 | MS.gene045226:CDS |
| AGGATCGTCGCCGCTGCTCT+CGG | 0.501790 | 3.3:+71691721 | None:intergenic |
| AAGCATCATGATCGAGGTGG+TGG | 0.503110 | 3.3:-71691470 | MS.gene045226:CDS |
| TTGACAATATGGATGATCTT+CGG | 0.509969 | 3.3:-71687233 | MS.gene045226:CDS |
| GCGGTTGTTGTTGTTGAAGG+TGG | 0.510579 | 3.3:+71691759 | None:intergenic |
| GCAGCAGATGTTGCAGCAAG+CGG | 0.510852 | 3.3:-71687973 | MS.gene045226:CDS |
| GAAGTCGAATAAGCATCTTT+GGG | 0.511026 | 3.3:-71691591 | MS.gene045226:CDS |
| GAGAGAAGTTTGGATCATGA+TGG | 0.523270 | 3.3:-71688015 | MS.gene045226:CDS |
| CCTGCCCTCAACTCACGCCT+CGG | 0.526894 | 3.3:+71687196 | None:intergenic |
| CTTCAAAGACATACCTTCAA+CGG | 0.531616 | 3.3:+71689376 | None:intergenic |
| AAAGTCAGTCTTGCTGTGGA+AGG | 0.533418 | 3.3:-71687810 | MS.gene045226:CDS |
| ATATACCGAGGCGTGAGTTG+AGG | 0.537639 | 3.3:-71687201 | None:intergenic |
| AACGGGTCCAAAAGAAATGT+TGG | 0.546852 | 3.3:+71689394 | None:intergenic |
| AGAGAAGTTTGGATCATGAT+GGG | 0.549925 | 3.3:-71688014 | MS.gene045226:CDS |
| AAAGAAACGCGCGGAAACCT+GGG | 0.551251 | 3.3:-71691678 | MS.gene045226:CDS |
| TGAAGGTGGTGGTGGTGTTG+CGG | 0.562582 | 3.3:+71691773 | None:intergenic |
| GGTGGTGGAAGTGGTTCTGG+TGG | 0.566673 | 3.3:-71691455 | MS.gene045226:CDS |
| CTTCTCTCAAGATTGAGTGT+TGG | 0.567585 | 3.3:+71688030 | None:intergenic |
| TTGTAGAAATCGATTGGGCG+AGG | 0.569863 | 3.3:+71691866 | None:intergenic |
| GGAGTTTCTCTCCAATTCCA+AGG | 0.571736 | 3.3:+71687943 | None:intergenic |
| AGGTGGTGGTGGTGTTGCGG+CGG | 0.579610 | 3.3:+71691776 | None:intergenic |
| AAAATCACGGTAATCATCCT+CGG | 0.581502 | 3.3:+71687308 | None:intergenic |
| TCGGCGGTGAGAATCATTTG+CGG | 0.586996 | 3.3:+71691740 | None:intergenic |
| ATTCTCACCGCCGAGAGCAG+CGG | 0.587631 | 3.3:-71691731 | MS.gene045226:CDS |
| TTTCTCTCCAATTCCAAGGA+GGG | 0.589209 | 3.3:+71687947 | None:intergenic |
| CAGCGGCGACGATCCTGAGA+TGG | 0.596039 | 3.3:-71691714 | MS.gene045226:CDS |
| AATATGGATGATCTTCGGCC+TGG | 0.596618 | 3.3:-71687228 | MS.gene045226:CDS |
| GGTGATTATACAAGACGGAT+AGG | 0.598109 | 3.3:-71687769 | MS.gene045226:CDS |
| TGGAATTGGAGAGAAACTCC+CGG | 0.599496 | 3.3:-71687940 | MS.gene045226:CDS |
| AAGTCAGTCTTGCTGTGGAA+GGG | 0.603947 | 3.3:-71687809 | MS.gene045226:CDS |
| ACTGAGCCCAACCTTCATCA+AGG | 0.605750 | 3.3:+71687602 | None:intergenic |
| GGGGAAAGTCAGTCTTGCTG+TGG | 0.620628 | 3.3:-71687814 | MS.gene045226:CDS |
| GATAGGTATTGATGGCACTC+CGG | 0.620845 | 3.3:-71687752 | MS.gene045226:CDS |
| CATTTATCAGTACACATAGT+CGG | 0.622025 | 3.3:+71691524 | None:intergenic |
| GTGGTGGAAGTGGTTCTGGT+GGG | 0.625269 | 3.3:-71691454 | MS.gene045226:CDS |
| TTTAGTTCTCAACCTAAAAG+CGG | 0.625441 | 3.3:+71687705 | None:intergenic |
| TCTGCTGCGGCAATGGCAAG+AGG | 0.628811 | 3.3:+71687988 | None:intergenic |
| ACGCCTCGGTATATGGCACC+AGG | 0.628824 | 3.3:+71687210 | None:intergenic |
| GCTTGCTGCAACATCTGCTG+CGG | 0.629023 | 3.3:+71687975 | None:intergenic |
| TGGTGGTTGAAGATCGGTGT+TGG | 0.640907 | 3.3:+71691808 | None:intergenic |
| CTATGTGTACTGATAAATGG+AGG | 0.647821 | 3.3:-71691520 | MS.gene045226:CDS |
| CCCGACGTGCCAGAAAATCA+CGG | 0.651686 | 3.3:+71687295 | None:intergenic |
| ATCGTCGCCGCTGCTCTCGG+CGG | 0.657648 | 3.3:+71691724 | None:intergenic |
| CGGCCTGGTGCCATATACCG+AGG | 0.668670 | 3.3:-71687213 | MS.gene045226:CDS |
| AATTTCCAATAGGCATGTCA+CGG | 0.669198 | 3.3:+71687635 | None:intergenic |
| AATGGGGTGATTATACAAGA+CGG | 0.669804 | 3.3:-71687774 | MS.gene045226:CDS |
| AAAGCGAAGCATCATGATCG+AGG | 0.672309 | 3.3:-71691476 | MS.gene045226:CDS |
| TCTTCTCTTCAGTATGCACA+GGG | 0.678271 | 3.3:+71687340 | None:intergenic |
| GTTTCTCTCCAATTCCAAGG+AGG | 0.688298 | 3.3:+71687946 | None:intergenic |
| TCTCGCGTCGTAGACCAATG+AGG | 0.690034 | 3.3:+71691636 | None:intergenic |
| CAAAGCTCCAAAGAAACGCG+CGG | 0.692450 | 3.3:-71691687 | MS.gene045226:CDS |
| CACTCCGGAAGCCATAAAGG+AGG | 0.698747 | 3.3:-71687737 | MS.gene045226:CDS |
| GCGAAGCATCATGATCGAGG+TGG | 0.709157 | 3.3:-71691473 | MS.gene045226:CDS |
| AGGGTTATATCAGTCAAATG+GGG | 0.717478 | 3.3:-71687790 | MS.gene045226:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATAATAAAAGCTTA+AGG | + | chr3.3:71689270-71689289 | None:intergenic | 10.0% |
| !!! | AGTATATATATATTTTTTAG+GGG | - | chr3.3:71690261-71690280 | MS.gene045226:intron | 10.0% |
| !! | AATAATATGTATTCACAAAA+TGG | - | chr3.3:71690150-71690169 | MS.gene045226:intron | 15.0% |
| !! | ATAATATGTATTCACAAAAT+GGG | - | chr3.3:71690151-71690170 | MS.gene045226:intron | 15.0% |
| !! | CATATAACGATAAAAAAAAT+TGG | - | chr3.3:71690676-71690695 | MS.gene045226:intron | 15.0% |
| !! | CTATAATATATTAACCTATT+AGG | + | chr3.3:71690345-71690364 | None:intergenic | 15.0% |
| !! | GAAAAATATGAAATAATCTT+AGG | + | chr3.3:71689791-71689810 | None:intergenic | 15.0% |
| !! | GATAATAATAATAATGTTTG+TGG | - | chr3.3:71687841-71687860 | MS.gene045226:intron | 15.0% |
| !!! | ATTTGAATTTTCATTTCAAT+AGG | + | chr3.3:71690730-71690749 | None:intergenic | 15.0% |
| !!! | CAATTTTTTTTATCGTTATA+TGG | + | chr3.3:71690678-71690697 | None:intergenic | 15.0% |
| !!! | TTATTTTACTTTTAATGTCT+AGG | - | chr3.3:71691546-71691565 | MS.gene045226:CDS | 15.0% |
| !!! | TTTTAATTAAGATAAACTGA+TGG | + | chr3.3:71690884-71690903 | None:intergenic | 15.0% |
| !! | AACAATATATTATCATTTGC+AGG | - | chr3.3:71691685-71691704 | MS.gene045226:CDS | 20.0% |
| !! | AGAACATATATATAACAATC+TGG | - | chr3.3:71690479-71690498 | MS.gene045226:intron | 20.0% |
| !! | ATTACCAATTCACTTAAATT+CGG | + | chr3.3:71689555-71689574 | None:intergenic | 20.0% |
| !! | TAAAGGATTTAGATATATGT+GGG | - | chr3.3:71690940-71690959 | MS.gene045226:intron | 20.0% |
| !! | TACAAAATATCATGAAATAG+CGG | - | chr3.3:71688319-71688338 | MS.gene045226:intron | 20.0% |
| !! | TACAAAATATTGTCAAATAG+CGG | - | chr3.3:71689155-71689174 | MS.gene045226:intron | 20.0% |
| !! | TTAAAGGATTTAGATATATG+TGG | - | chr3.3:71690939-71690958 | MS.gene045226:intron | 20.0% |
| !! | TTATAGGAATATTGACAATA+TGG | - | chr3.3:71691846-71691865 | MS.gene045226:CDS | 20.0% |
| !!! | ATAGTTAGGTTTTTAATAGT+CGG | + | chr3.3:71688939-71688958 | None:intergenic | 20.0% |
| !!! | ATTTTGTACTAAATAGCATA+TGG | + | chr3.3:71689143-71689162 | None:intergenic | 20.0% |
| !!! | GTTTAAAACTTTTATAACTC+CGG | - | chr3.3:71688669-71688688 | MS.gene045226:intron | 20.0% |
| !!! | TCATTTTTTTCTTCTTCTTT+AGG | - | chr3.3:71691205-71691224 | MS.gene045226:intron | 20.0% |
| !!! | TGGATAATTGTTTATGTTTT+TGG | - | chr3.3:71687887-71687906 | MS.gene045226:intron | 20.0% |
| !!! | TTTAAAACTTTTATAACTCC+GGG | - | chr3.3:71688670-71688689 | MS.gene045226:intron | 20.0% |
| !!! | TTTTTCTTTACTCCAAATTT+CGG | + | chr3.3:71689307-71689326 | None:intergenic | 20.0% |
| ! | ACATTATGGCTTGAAATATT+AGG | - | chr3.3:71688869-71688888 | MS.gene045226:intron | 25.0% |
| ! | ATGGAATGTTTACAAGAAAA+AGG | + | chr3.3:71690659-71690678 | None:intergenic | 25.0% |
| ! | CAGTTACAAAAAGAATAGTT+AGG | + | chr3.3:71688953-71688972 | None:intergenic | 25.0% |
| ! | CTTAAACGATAATAATACTG+CGG | - | chr3.3:71688233-71688252 | MS.gene045226:intron | 25.0% |
| ! | TATAAATCACTGCAATTTGA+AGG | - | chr3.3:71689489-71689508 | MS.gene045226:intron | 25.0% |
| ! | TATATTATCATTTGCAGGAA+TGG | - | chr3.3:71691690-71691709 | MS.gene045226:CDS | 25.0% |
| ! | TCTTACATGCAATTTGATAA+AGG | - | chr3.3:71687758-71687777 | MS.gene045226:CDS | 25.0% |
| ! | TTGTACTAAATACTCTATTG+TGG | + | chr3.3:71688304-71688323 | None:intergenic | 25.0% |
| ! | TTTGGAAAATGTAGTTGATT+AGG | + | chr3.3:71688976-71688995 | None:intergenic | 25.0% |
| !! | CACATATTGAAATGTTACTT+TGG | - | chr3.3:71690700-71690719 | MS.gene045226:intron | 25.0% |
| !! | TAAGAGAATTTGATGGTTAT+AGG | - | chr3.3:71691830-71691849 | MS.gene045226:CDS | 25.0% |
| !! | TAGTTAGGTTTTTAATAGTC+GGG | + | chr3.3:71688938-71688957 | None:intergenic | 25.0% |
| !! | TTAAAACTTTTATAACTCCG+GGG | - | chr3.3:71688671-71688690 | MS.gene045226:intron | 25.0% |
| !! | TTGTTTAAAGTTCATGTACT+GGG | - | chr3.3:71691579-71691598 | MS.gene045226:CDS | 25.0% |
| !!! | AAGTGAATCTTTTAGAATGT+CGG | - | chr3.3:71688429-71688448 | MS.gene045226:intron | 25.0% |
| !!! | ATTTGATTTGATGCTATGTT+TGG | - | chr3.3:71687867-71687886 | MS.gene045226:intron | 25.0% |
| !!! | GCTATTTTACATGTTTGTAT+CGG | - | chr3.3:71689041-71689060 | MS.gene045226:intron | 25.0% |
| !!! | GGTATCTTTTTCAAACATTA+TGG | - | chr3.3:71688855-71688874 | MS.gene045226:intron | 25.0% |
| !!! | TTCTTTTGTAAAAAGTGCAT+CGG | + | chr3.3:71688176-71688195 | None:intergenic | 25.0% |
| AAAATTCCACTACGTTATAG+TGG | + | chr3.3:71689099-71689118 | None:intergenic | 30.0% | |
| AACTGTTCCTAAAGACAAAA+TGG | + | chr3.3:71689638-71689657 | None:intergenic | 30.0% | |
| AAGAAAAAGGAACAGCAAAA+GGG | + | chr3.3:71690646-71690665 | None:intergenic | 30.0% | |
| AAGGGTTATATCAGTCAAAT+GGG | - | chr3.3:71691299-71691318 | MS.gene045226:intron | 30.0% | |
| AATGTCCAGTAGTAGTATTT+AGG | - | chr3.3:71690902-71690921 | MS.gene045226:intron | 30.0% | |
| ACAAATTTGGTCCAAAAAGA+AGG | - | chr3.3:71688824-71688843 | MS.gene045226:intron | 30.0% | |
| ACTGTTCCTAAAGACAAAAT+GGG | + | chr3.3:71689637-71689656 | None:intergenic | 30.0% | |
| ACTTCATAATACAAGAAGCA+CGG | + | chr3.3:71688895-71688914 | None:intergenic | 30.0% | |
| AGACCTGATATCAATTGATA+TGG | + | chr3.3:71689420-71689439 | None:intergenic | 30.0% | |
| ATGTCCAGTAGTAGTATTTA+GGG | - | chr3.3:71690903-71690922 | MS.gene045226:intron | 30.0% | |
| CAAACCGAATTTAAGTGAAT+TGG | - | chr3.3:71689548-71689567 | MS.gene045226:intron | 30.0% | |
| CAAATTTGGTCCAAAAAGAA+GGG | - | chr3.3:71688825-71688844 | MS.gene045226:intron | 30.0% | |
| CACTATAATTCGAAACAAAC+AGG | + | chr3.3:71688130-71688149 | None:intergenic | 30.0% | |
| CATTTATCAGTACACATAGT+CGG | + | chr3.3:71687569-71687588 | None:intergenic | 30.0% | |
| CTGTTTGTTTCGAATTATAG+TGG | - | chr3.3:71688128-71688147 | MS.gene045226:intron | 30.0% | |
| CTTCTTTGTAGAAATCGATT+GGG | + | chr3.3:71687232-71687251 | None:intergenic | 30.0% | |
| GACCTGATATCAATTGATAT+GGG | + | chr3.3:71689419-71689438 | None:intergenic | 30.0% | |
| GCTATATCATAATTGCATAG+TGG | - | chr3.3:71688344-71688363 | MS.gene045226:intron | 30.0% | |
| TATGTTCATTAACAATGCAC+TGG | - | chr3.3:71690451-71690470 | MS.gene045226:intron | 30.0% | |
| TATTGTTACGTCAACAGAAA+CGG | + | chr3.3:71691672-71691691 | None:intergenic | 30.0% | |
| TCTCATCATTCTCAAATACT+TGG | - | chr3.3:71691019-71691038 | MS.gene045226:intron | 30.0% | |
| TCTGGTTATTGCAATTTACT+AGG | - | chr3.3:71690778-71690797 | MS.gene045226:intron | 30.0% | |
| TCTTCTTTGTAGAAATCGAT+TGG | + | chr3.3:71687233-71687252 | None:intergenic | 30.0% | |
| TTCTTTGTGAAACCGAAATT+TGG | - | chr3.3:71689292-71689311 | MS.gene045226:intron | 30.0% | |
| TTGACAATATGGATGATCTT+CGG | - | chr3.3:71691857-71691876 | MS.gene045226:CDS | 30.0% | |
| TTGTACTAAATAGCATATGG+TGG | + | chr3.3:71689140-71689159 | None:intergenic | 30.0% | |
| TTTCAGCTCATAAATCATGT+AGG | - | chr3.3:71689807-71689826 | MS.gene045226:intron | 30.0% | |
| ! | AAAGTGATTTGTGAATACTC+TGG | - | chr3.3:71688519-71688538 | MS.gene045226:intron | 30.0% |
| ! | AAGTGATTTGTGAATACTCT+GGG | - | chr3.3:71688520-71688539 | MS.gene045226:intron | 30.0% |
| ! | AAGTGTTGTCAATAACAAGT+TGG | + | chr3.3:71688711-71688730 | None:intergenic | 30.0% |
| ! | ACATGAAGGAACTTTTACTT+TGG | + | chr3.3:71690998-71691017 | None:intergenic | 30.0% |
| ! | AGAGAAGATATTTTATACCG+AGG | - | chr3.3:71691765-71691784 | MS.gene045226:CDS | 30.0% |
| ! | ATTTTCCAATACAGCAATCT+AGG | + | chr3.3:71689878-71689897 | None:intergenic | 30.0% |
| ! | GAAGATTCAACTTTAGAAGT+AGG | + | chr3.3:71687740-71687759 | None:intergenic | 30.0% |
| ! | GTTGTTTAAAGTTCATGTAC+TGG | - | chr3.3:71691578-71691597 | MS.gene045226:CDS | 30.0% |
| ! | TCTTTTTGGACCAAATTTGT+TGG | + | chr3.3:71688824-71688843 | None:intergenic | 30.0% |
| ! | TGAAGAGTGTAATTTCCAAT+AGG | + | chr3.3:71691468-71691487 | None:intergenic | 30.0% |
| !! | ACTATAACGTAGTGGAATTT+TGG | - | chr3.3:71689098-71689117 | MS.gene045226:intron | 30.0% |
| !! | GATACTGGTTCTTACTATTA+TGG | - | chr3.3:71691248-71691267 | MS.gene045226:intron | 30.0% |
| !! | GTAAAGAAAAAGCATTGAGT+TGG | - | chr3.3:71689316-71689335 | MS.gene045226:intron | 30.0% |
| !! | TTTAGTTCTCAACCTAAAAG+CGG | + | chr3.3:71691388-71691407 | None:intergenic | 30.0% |
| !!! | AAAGTTTTAAACACCATCAC+TGG | + | chr3.3:71688661-71688680 | None:intergenic | 30.0% |
| !!! | TGTGACTTTTGAGGTAATAA+TGG | - | chr3.3:71688603-71688622 | MS.gene045226:intron | 30.0% |
| AAAATCACGGTAATCATCCT+CGG | + | chr3.3:71691785-71691804 | None:intergenic | 35.0% | |
| AATGGGGTGATTATACAAGA+CGG | - | chr3.3:71691316-71691335 | MS.gene045226:intron | 35.0% | |
| AATTTCCAATAGGCATGTCA+CGG | + | chr3.3:71691458-71691477 | None:intergenic | 35.0% | |
| ACAGGTCTAAGAGAATTTGA+TGG | - | chr3.3:71691823-71691842 | MS.gene045226:CDS | 35.0% | |
| ACTAATGTGGCAAATACATG+GGG | - | chr3.3:71688484-71688503 | MS.gene045226:intron | 35.0% | |
| ACTCAATCTTGAGAGAAGTT+TGG | - | chr3.3:71691065-71691084 | MS.gene045226:intron | 35.0% | |
| ACTTTGACCAGTATTCAACT+TGG | + | chr3.3:71689954-71689973 | None:intergenic | 35.0% | |
| AGAGAAGTTTGGATCATGAT+GGG | - | chr3.3:71691076-71691095 | MS.gene045226:intron | 35.0% | |
| AGCCCATATCAATTGATATC+AGG | - | chr3.3:71689414-71689433 | MS.gene045226:intron | 35.0% | |
| AGGATTAGAACCAAACCAAA+TGG | + | chr3.3:71689858-71689877 | None:intergenic | 35.0% | |
| AGGGTTATATCAGTCAAATG+GGG | - | chr3.3:71691300-71691319 | MS.gene045226:intron | 35.0% | |
| AGTAGTAGTATTTAGGGAAG+GGG | - | chr3.3:71690909-71690928 | MS.gene045226:intron | 35.0% | |
| AGTGTATGCCCTAAATGTAA+GGG | + | chr3.3:71691621-71691640 | None:intergenic | 35.0% | |
| ATAGCATAGCTTACCATTTC+CGG | + | chr3.3:71691172-71691191 | None:intergenic | 35.0% | |
| CAAGAAAAAGGAACAGCAAA+AGG | + | chr3.3:71690647-71690666 | None:intergenic | 35.0% | |
| CACTACGTTATAGTGGTATA+GGG | + | chr3.3:71689092-71689111 | None:intergenic | 35.0% | |
| CAGTAGTAGTATTTAGGGAA+GGG | - | chr3.3:71690908-71690927 | MS.gene045226:intron | 35.0% | |
| CTAATCCTAGATTGCTGTAT+TGG | - | chr3.3:71689870-71689889 | MS.gene045226:intron | 35.0% | |
| CTTCAAAGACATACCTTCAA+CGG | + | chr3.3:71689717-71689736 | None:intergenic | 35.0% | |
| GAAGGGTTATATCAGTCAAA+TGG | - | chr3.3:71691298-71691317 | MS.gene045226:intron | 35.0% | |
| GAAGTCGAATAAGCATCTTT+GGG | - | chr3.3:71687499-71687518 | MS.gene045226:intron | 35.0% | |
| GACTAATGTGGCAAATACAT+GGG | - | chr3.3:71688483-71688502 | MS.gene045226:intron | 35.0% | |
| GAGAATGATGAGAAACATGA+AGG | + | chr3.3:71691012-71691031 | None:intergenic | 35.0% | |
| GTCATATAGGCATACTTTGA+TGG | + | chr3.3:71691716-71691735 | None:intergenic | 35.0% | |
| GTGAATTTAACTGCTACCAT+AGG | - | chr3.3:71690610-71690629 | MS.gene045226:intron | 35.0% | |
| GTGCTTCTTGTATTATGAAG+TGG | - | chr3.3:71688894-71688913 | MS.gene045226:intron | 35.0% | |
| GTGTGGTGTGAAATAAAATC+CGG | - | chr3.3:71688090-71688109 | MS.gene045226:intron | 35.0% | |
| TAACCTATTAGGTCCAATCT+CGG | + | chr3.3:71690334-71690353 | None:intergenic | 35.0% | |
| TCAACCAAGTCCAACAAATT+TGG | - | chr3.3:71688811-71688830 | MS.gene045226:intron | 35.0% | |
| TCCTACAGATTACACTAGTA+CGG | + | chr3.3:71690754-71690773 | None:intergenic | 35.0% | |
| TGGCAGAGATTTGATCTAAT+AGG | - | chr3.3:71690499-71690518 | MS.gene045226:intron | 35.0% | |
| TGGTAAGCTATGCTATGTAA+AGG | - | chr3.3:71691176-71691195 | MS.gene045226:intron | 35.0% | |
| TGTAATCTGTAGGAATGTTC+TGG | - | chr3.3:71690760-71690779 | MS.gene045226:intron | 35.0% | |
| TTAAGAGAGAGAAGTAAGTG+TGG | - | chr3.3:71687692-71687711 | MS.gene045226:CDS | 35.0% | |
| TTCAAAGACATACCTTCAAC+GGG | + | chr3.3:71689716-71689735 | None:intergenic | 35.0% | |
| TTCTTACTATTATGGCAGGT+GGG | - | chr3.3:71691256-71691275 | MS.gene045226:intron | 35.0% | |
| TTGCCACATTAGTCCTTAAT+GGG | + | chr3.3:71688477-71688496 | None:intergenic | 35.0% | |
| TTGGTTGAATGCTAACTCTT+TGG | + | chr3.3:71688799-71688818 | None:intergenic | 35.0% | |
| TTGTTGACCCCTTACATTTA+GGG | - | chr3.3:71691610-71691629 | MS.gene045226:CDS | 35.0% | |
| TTTGCCACATTAGTCCTTAA+TGG | + | chr3.3:71688478-71688497 | None:intergenic | 35.0% | |
| TTTGTTGACCCCTTACATTT+AGG | - | chr3.3:71691609-71691628 | MS.gene045226:CDS | 35.0% | |
| ! | AATACTTGGCAATTAGCTTC+TGG | - | chr3.3:71691033-71691052 | MS.gene045226:intron | 35.0% |
| ! | AATAGCATATGGTGGAACAA+TGG | + | chr3.3:71689132-71689151 | None:intergenic | 35.0% |
| ! | ATTCGGTTTGATGATTCAAG+AGG | + | chr3.3:71689538-71689557 | None:intergenic | 35.0% |
| ! | ATTTCGCCCATTTTGTCTTT+AGG | - | chr3.3:71689628-71689647 | MS.gene045226:intron | 35.0% |
| ! | CGACTATGTGTACTGATAAA+TGG | - | chr3.3:71687567-71687586 | MS.gene045226:intron | 35.0% |
| ! | CGTAAAGAATGTGACTTTTG+AGG | - | chr3.3:71688594-71688613 | MS.gene045226:intron | 35.0% |
| ! | CTATGTGTACTGATAAATGG+AGG | - | chr3.3:71687570-71687589 | MS.gene045226:intron | 35.0% |
| ! | CTTGATTAGTTGATTCCATG+TGG | - | chr3.3:71689832-71689851 | MS.gene045226:intron | 35.0% |
| ! | GATGATGCCAACATTTCTTT+TGG | - | chr3.3:71689689-71689708 | MS.gene045226:intron | 35.0% |
| ! | GCAAATACATGGGGTTTTTA+TGG | - | chr3.3:71688493-71688512 | MS.gene045226:intron | 35.0% |
| ! | GCTAACTTGTGCAAATTTCA+TGG | - | chr3.3:71691522-71691541 | MS.gene045226:CDS | 35.0% |
| ! | TATTGACAACACTTGACTTG+TGG | - | chr3.3:71688717-71688736 | MS.gene045226:intron | 35.0% |
| ! | TGAGAACTAAACGTGCATTT+TGG | - | chr3.3:71691397-71691416 | MS.gene045226:intron | 35.0% |
| ! | TTCGGTTTGATGATTCAAGA+GGG | + | chr3.3:71689537-71689556 | None:intergenic | 35.0% |
| ! | TTGACAAATAGCAGCTTTAG+CGG | - | chr3.3:71689066-71689085 | MS.gene045226:intron | 35.0% |
| ! | TTGCATAGTGGAATTTGAAC+AGG | - | chr3.3:71688356-71688375 | MS.gene045226:intron | 35.0% |
| !! | AACTAAACGTGCATTTTGGT+TGG | - | chr3.3:71691401-71691420 | MS.gene045226:intron | 35.0% |
| !! | CGCTTTCTTATTTCTGATAC+TGG | - | chr3.3:71691233-71691252 | MS.gene045226:intron | 35.0% |
| !! | GGGATATCGTTTTGATGTTT+AGG | - | chr3.3:71690960-71690979 | MS.gene045226:intron | 35.0% |
| !! | TGAGAGAAAAGGGTTTTGAT+CGG | - | chr3.3:71687540-71687559 | MS.gene045226:intron | 35.0% |
| AACGGGTCCAAAAGAAATGT+TGG | + | chr3.3:71689699-71689718 | None:intergenic | 40.0% | |
| AAGCCATAAAGGAGGCAATT+AGG | - | chr3.3:71691361-71691380 | MS.gene045226:intron | 40.0% | |
| ACCAGTATTCAACTTGGCTA+GGG | + | chr3.3:71689948-71689967 | None:intergenic | 40.0% | |
| ACTGCAATTTGAAGGTTCTC+AGG | - | chr3.3:71689497-71689516 | MS.gene045226:intron | 40.0% | |
| AGATTTGTCCCTAAAATCGG+TGG | - | chr3.3:71688027-71688046 | MS.gene045226:CDS | 40.0% | |
| AGCCATAAAGGAGGCAATTA+GGG | - | chr3.3:71691362-71691381 | MS.gene045226:intron | 40.0% | |
| ATCTTCTCTTCAGTATGCAC+AGG | + | chr3.3:71691754-71691773 | None:intergenic | 40.0% | |
| ATGACTCAGAACAGCAACTA+GGG | + | chr3.3:71689582-71689601 | None:intergenic | 40.0% | |
| ATGTTGTCTATTGCAGAGAG+TGG | + | chr3.3:71689236-71689255 | None:intergenic | 40.0% | |
| CAGAAACGGTGCACAAAATA+CGG | + | chr3.3:71691658-71691677 | None:intergenic | 40.0% | |
| CAGTGTATGCCCTAAATGTA+AGG | + | chr3.3:71691622-71691641 | None:intergenic | 40.0% | |
| CCACTACGTTATAGTGGTAT+AGG | + | chr3.3:71689093-71689112 | None:intergenic | 40.0% | |
| CCAGTAGTAGTATTTAGGGA+AGG | - | chr3.3:71690907-71690926 | MS.gene045226:intron | 40.0% | |
| CCCAGATTTGTCCCTAAAAT+CGG | - | chr3.3:71688024-71688043 | MS.gene045226:CDS | 40.0% | |
| CCTATACCACTATAACGTAG+TGG | - | chr3.3:71689090-71689109 | MS.gene045226:intron | 40.0% | |
| CCTTCCCTAAATACTACTAC+TGG | + | chr3.3:71690910-71690929 | None:intergenic | 40.0% | |
| CGAACTTCCTAAAGCTATAC+AGG | + | chr3.3:71689342-71689361 | None:intergenic | 40.0% | |
| CGAAGTCGAATAAGCATCTT+TGG | - | chr3.3:71687498-71687517 | MS.gene045226:intron | 40.0% | |
| CGGTTTATGGTTGAACCAAT+CGG | - | chr3.3:71690544-71690563 | MS.gene045226:intron | 40.0% | |
| CTCTCTGCAATAGACAACAT+TGG | - | chr3.3:71689236-71689255 | MS.gene045226:intron | 40.0% | |
| CTGCAATTTGAAGGTTCTCA+GGG | - | chr3.3:71689498-71689517 | MS.gene045226:intron | 40.0% | |
| CTTCTCTCAAGATTGAGTGT+TGG | + | chr3.3:71691063-71691082 | None:intergenic | 40.0% | |
| GACTTATTATGTTGCTGTGC+AGG | - | chr3.3:71689662-71689681 | MS.gene045226:intron | 40.0% | |
| GAGAGAAGTTTGGATCATGA+TGG | - | chr3.3:71691075-71691094 | MS.gene045226:intron | 40.0% | |
| GGACTAATGTGGCAAATACA+TGG | - | chr3.3:71688482-71688501 | MS.gene045226:intron | 40.0% | |
| GGTGATTATACAAGACGGAT+AGG | - | chr3.3:71691321-71691340 | MS.gene045226:intron | 40.0% | |
| GGTGTGAAATAAAATCCGGA+GGG | - | chr3.3:71688094-71688113 | MS.gene045226:intron | 40.0% | |
| GTAGTAGTATTTAGGGAAGG+GGG | - | chr3.3:71690910-71690929 | MS.gene045226:intron | 40.0% | |
| GTGTATGCCCTAAATGTAAG+GGG | + | chr3.3:71691620-71691639 | None:intergenic | 40.0% | |
| GTTCTTACTATTATGGCAGG+TGG | - | chr3.3:71691255-71691274 | MS.gene045226:intron | 40.0% | |
| TACACTCTTCACCTTGATGA+AGG | - | chr3.3:71691477-71691496 | MS.gene045226:CDS | 40.0% | |
| TAGCATAGCTTACCATTTCC+GGG | + | chr3.3:71691171-71691190 | None:intergenic | 40.0% | |
| TATAGCAATCTAGCCGAGAT+TGG | - | chr3.3:71690318-71690337 | MS.gene045226:intron | 40.0% | |
| TATGGTCAGACTCGTCATAT+AGG | + | chr3.3:71691729-71691748 | None:intergenic | 40.0% | |
| TATGTAGGCTTTCAAACGTG+TGG | - | chr3.3:71688073-71688092 | MS.gene045226:intron | 40.0% | |
| TCACAAGTGCGTGTTTATGT+AGG | - | chr3.3:71688058-71688077 | MS.gene045226:intron | 40.0% | |
| TCAGCGAAGATGAGAGAAAA+GGG | - | chr3.3:71687530-71687549 | MS.gene045226:intron | 40.0% | |
| TCCAAAAAGAAGGGCTGATT+TGG | - | chr3.3:71688834-71688853 | MS.gene045226:intron | 40.0% | |
| TCTTACTATTATGGCAGGTG+GGG | - | chr3.3:71691257-71691276 | MS.gene045226:intron | 40.0% | |
| TCTTCACCTTGATGAAGGTT+GGG | - | chr3.3:71691482-71691501 | MS.gene045226:CDS | 40.0% | |
| TCTTCTCTTCAGTATGCACA+GGG | + | chr3.3:71691753-71691772 | None:intergenic | 40.0% | |
| TGATAGCACTTGCACAAACA+GGG | - | chr3.3:71688403-71688422 | MS.gene045226:intron | 40.0% | |
| TGCAATTTGAAGGTTCTCAG+GGG | - | chr3.3:71689499-71689518 | MS.gene045226:intron | 40.0% | |
| TGGTGTGAAATAAAATCCGG+AGG | - | chr3.3:71688093-71688112 | MS.gene045226:intron | 40.0% | |
| TTCAGCGAAGATGAGAGAAA+AGG | - | chr3.3:71687529-71687548 | MS.gene045226:intron | 40.0% | |
| TTCATATCCTGCTACGCAAA+AGG | + | chr3.3:71688266-71688285 | None:intergenic | 40.0% | |
| TTGTCAAATAGCGGCTATAG+TGG | - | chr3.3:71689164-71689183 | MS.gene045226:intron | 40.0% | |
| TTTCTCTCCAATTCCAAGGA+GGG | + | chr3.3:71691146-71691165 | None:intergenic | 40.0% | |
| ! | AACCAAGATGCACACCTTTT+GGG | + | chr3.3:71689015-71689034 | None:intergenic | 40.0% |
| ! | ACCAAATCAGCCCTTCTTTT+TGG | + | chr3.3:71688838-71688857 | None:intergenic | 40.0% |
| ! | ATCTAATAGGTTGACCACAC+AGG | - | chr3.3:71690512-71690531 | MS.gene045226:intron | 40.0% |
| ! | ATGGGCTGAGTATCTACTAA+GGG | + | chr3.3:71689401-71689420 | None:intergenic | 40.0% |
| ! | ATTTCTTTTGGACCCGTTGA+AGG | - | chr3.3:71689701-71689720 | MS.gene045226:intron | 40.0% |
| ! | CGAATTATAGTGGAAGCATG+CGG | - | chr3.3:71688138-71688157 | MS.gene045226:intron | 40.0% |
| ! | CGATTGGTTCAACCATAAAC+CGG | + | chr3.3:71690546-71690565 | None:intergenic | 40.0% |
| ! | CTGGTTCTTACTATTATGGC+AGG | - | chr3.3:71691252-71691271 | MS.gene045226:intron | 40.0% |
| ! | CTGTTCTGAGTCATGACATT+TGG | - | chr3.3:71689588-71689607 | MS.gene045226:intron | 40.0% |
| ! | GGATGATTACCGTGATTTTC+TGG | - | chr3.3:71691786-71691805 | MS.gene045226:CDS | 40.0% |
| ! | GTTTGATGATTCAAGAGGGT+AGG | + | chr3.3:71689533-71689552 | None:intergenic | 40.0% |
| ! | TAACCAAGATGCACACCTTT+TGG | + | chr3.3:71689016-71689035 | None:intergenic | 40.0% |
| ! | TATGGGCTGAGTATCTACTA+AGG | + | chr3.3:71689402-71689421 | None:intergenic | 40.0% |
| ! | TGGATTTAAGTTTGATGCCC+CGG | + | chr3.3:71688691-71688710 | None:intergenic | 40.0% |
| ! | TTCAACTTGGCTAGGGTATT+AGG | + | chr3.3:71689941-71689960 | None:intergenic | 40.0% |
| ! | TTGATAGCACTTGCACAAAC+AGG | - | chr3.3:71688402-71688421 | MS.gene045226:intron | 40.0% |
| ! | TTTGCGGTTGTTGTTGTTGA+AGG | + | chr3.3:71687337-71687356 | None:intergenic | 40.0% |
| !! | ACAAGACGGATAGGTATTGA+TGG | - | chr3.3:71691330-71691349 | MS.gene045226:intron | 40.0% |
| !! | ACCGATTTTAGGGACAAATC+TGG | + | chr3.3:71688028-71688047 | None:intergenic | 40.0% |
| !! | ATAGCTTTAGGAAGTTCGCT+TGG | - | chr3.3:71689344-71689363 | MS.gene045226:intron | 40.0% |
| !! | CCGATTTTAGGGACAAATCT+GGG | + | chr3.3:71688027-71688046 | None:intergenic | 40.0% |
| !! | CGATTTTAGGGACAAATCTG+GGG | + | chr3.3:71688026-71688045 | None:intergenic | 40.0% |
| !! | GGACTGGATTTGTTGGAATT+TGG | + | chr3.3:71688994-71689013 | None:intergenic | 40.0% |
| !! | TGGACCAAATTTGTTGGACT+TGG | + | chr3.3:71688818-71688837 | None:intergenic | 40.0% |
| !!! | TAAACGTGCATTTTGGTTGG+AGG | - | chr3.3:71691404-71691423 | MS.gene045226:intron | 40.0% |
| AAAGGGTAACAGGTCACCTA+TGG | + | chr3.3:71690629-71690648 | None:intergenic | 45.0% | |
| AACCAAACCAAATGGCCACA+TGG | + | chr3.3:71689850-71689869 | None:intergenic | 45.0% | |
| AATATGGATGATCTTCGGCC+TGG | - | chr3.3:71691862-71691881 | MS.gene045226:CDS | 45.0% | |
| ACGGTGCACAAAATACGGTT+TGG | + | chr3.3:71691653-71691672 | None:intergenic | 45.0% | |
| AGGAACAGCAAAAGGGTAAC+AGG | + | chr3.3:71690639-71690658 | None:intergenic | 45.0% | |
| ATTGACCGTGACATGCCTAT+TGG | - | chr3.3:71691450-71691469 | MS.gene045226:CDS | 45.0% | |
| ATTGCCTCCTTTATGGCTTC+CGG | + | chr3.3:71691360-71691379 | None:intergenic | 45.0% | |
| CAATTTGAAGGTTCTCAGGG+GGG | - | chr3.3:71689501-71689520 | MS.gene045226:intron | 45.0% | |
| CATGACTCAGAACAGCAACT+AGG | + | chr3.3:71689583-71689602 | None:intergenic | 45.0% | |
| CCAACAAATCCAGTCCCAAA+AGG | - | chr3.3:71688998-71689017 | MS.gene045226:intron | 45.0% | |
| CTCTTCACCTTGATGAAGGT+TGG | - | chr3.3:71691481-71691500 | MS.gene045226:CDS | 45.0% | |
| CTTCAGTATGCACAGGGATA+TGG | + | chr3.3:71691747-71691766 | None:intergenic | 45.0% | |
| GAAGTCATTCAGCTCATGTC+TGG | - | chr3.3:71690800-71690819 | MS.gene045226:intron | 45.0% | |
| GACCAGTATTCAACTTGGCT+AGG | + | chr3.3:71689949-71689968 | None:intergenic | 45.0% | |
| GCAATTTGAAGGTTCTCAGG+GGG | - | chr3.3:71689500-71689519 | MS.gene045226:intron | 45.0% | |
| GCCGTACTAGTGTAATCTGT+AGG | - | chr3.3:71690750-71690769 | MS.gene045226:intron | 45.0% | |
| GCTATAGCACTATTGCACAG+AGG | - | chr3.3:71689188-71689207 | MS.gene045226:intron | 45.0% | |
| GGACCCATTAAGGACTAATG+TGG | - | chr3.3:71688471-71688490 | MS.gene045226:intron | 45.0% | |
| GGAGTTTCTCTCCAATTCCA+AGG | + | chr3.3:71691150-71691169 | None:intergenic | 45.0% | |
| GGGAAGGGGGTTGTATTTAA+AGG | - | chr3.3:71690923-71690942 | MS.gene045226:intron | 45.0% | |
| GTACAATGCATGTCCAGTGA+TGG | - | chr3.3:71688645-71688664 | MS.gene045226:intron | 45.0% | |
| GTATTAGGTTAGTGAGTCGC+TGG | + | chr3.3:71689926-71689945 | None:intergenic | 45.0% | |
| GTGCGTCTAGAAAATGAGAC+AGG | + | chr3.3:71690580-71690599 | None:intergenic | 45.0% | |
| GTTTCTCTCCAATTCCAAGG+AGG | + | chr3.3:71691147-71691166 | None:intergenic | 45.0% | |
| TAGCCGAGATTGGACCTAAT+AGG | - | chr3.3:71690328-71690347 | MS.gene045226:intron | 45.0% | |
| TATGGTTGAACCAATCGGAC+CGG | - | chr3.3:71690549-71690568 | MS.gene045226:intron | 45.0% | |
| TGGAATTGGAGAGAAACTCC+CGG | - | chr3.3:71691150-71691169 | MS.gene045226:intron | 45.0% | |
| TGTGCAAGTGCTATCAACTG+CGG | + | chr3.3:71688399-71688418 | None:intergenic | 45.0% | |
| TTCCATGTGGCCATTTGGTT+TGG | - | chr3.3:71689845-71689864 | MS.gene045226:intron | 45.0% | |
| TTGCAGAGAGTGGAGAATAG+CGG | + | chr3.3:71689226-71689245 | None:intergenic | 45.0% | |
| TTGTAGAAATCGATTGGGCG+AGG | + | chr3.3:71687227-71687246 | None:intergenic | 45.0% | |
| ! | AAAGCGAAGCATCATGATCG+AGG | - | chr3.3:71687614-71687633 | MS.gene045226:CDS | 45.0% |
| ! | AAAGTCAGTCTTGCTGTGGA+AGG | - | chr3.3:71691280-71691299 | MS.gene045226:intron | 45.0% |
| ! | AAGTCAGTCTTGCTGTGGAA+GGG | - | chr3.3:71691281-71691300 | MS.gene045226:intron | 45.0% |
| ! | ACCCTAGCCAAGTTGAATAC+TGG | - | chr3.3:71689944-71689963 | MS.gene045226:intron | 45.0% |
| ! | AGCATATGGTGGAACAATGG+TGG | + | chr3.3:71689129-71689148 | None:intergenic | 45.0% |
| ! | CTATCAACCTTTTGCGTAGC+AGG | - | chr3.3:71688256-71688275 | MS.gene045226:intron | 45.0% |
| ! | GAGTTGGCCTGTATAGCTTT+AGG | - | chr3.3:71689332-71689351 | MS.gene045226:intron | 45.0% |
| ! | GTTGATTCCATGTGGCCATT+TGG | - | chr3.3:71689840-71689859 | MS.gene045226:intron | 45.0% |
| ! | GTTGTTGTTGTTGAAGGTGG+TGG | + | chr3.3:71687331-71687350 | None:intergenic | 45.0% |
| !! | GATAGGTATTGATGGCACTC+CGG | - | chr3.3:71691338-71691357 | MS.gene045226:intron | 45.0% |
| !! | TTGCTGTAGTGGACCCATTA+AGG | - | chr3.3:71688461-71688480 | MS.gene045226:intron | 45.0% |
| !!! | ACTTGTCTGCCACCGATTTT+AGG | + | chr3.3:71688039-71688058 | None:intergenic | 45.0% |
| !!! | CCTTTTGGGACTGGATTTGT+TGG | + | chr3.3:71689001-71689020 | None:intergenic | 45.0% |
| !!! | CTTGTCTGCCACCGATTTTA+GGG | + | chr3.3:71688038-71688057 | None:intergenic | 45.0% |
| !!! | TGCATTTTGGTTGGAGGATG+AGG | - | chr3.3:71691410-71691429 | MS.gene045226:CDS | 45.0% |
| !!! | AAAGTATATATATATTTTTT+AGG | - | chr3.3:71690259-71690278 | MS.gene045226:intron | 5.0% |
| !!! | AAGTATATATATATTTTTTA+GGG | - | chr3.3:71690260-71690279 | MS.gene045226:intron | 5.0% |
| AAAGAAACGCGCGGAAACCT+GGG | - | chr3.3:71687412-71687431 | MS.gene045226:intron | 50.0% | |
| AAGCATCATGATCGAGGTGG+TGG | - | chr3.3:71687620-71687639 | MS.gene045226:CDS | 50.0% | |
| ACTGAGCCCAACCTTCATCA+AGG | + | chr3.3:71691491-71691510 | None:intergenic | 50.0% | |
| AGTGGAATTTGAACAGGCCG+CGG | - | chr3.3:71688362-71688381 | MS.gene045226:intron | 50.0% | |
| CAAAGCTCCAAAGAAACGCG+CGG | - | chr3.3:71687403-71687422 | MS.gene045226:intron | 50.0% | |
| GAAAATGAGACAGGACCAGC+CGG | + | chr3.3:71690571-71690590 | None:intergenic | 50.0% | |
| GGCCCTAATTGCCTCCTTTA+TGG | + | chr3.3:71691367-71691386 | None:intergenic | 50.0% | |
| GGTCACACTAGTTGCTGTAG+TGG | - | chr3.3:71688450-71688469 | MS.gene045226:intron | 50.0% | |
| GTGCTATCAACTGCGGATCA+CGG | + | chr3.3:71688392-71688411 | None:intergenic | 50.0% | |
| TCAACCATAAACCGGACCGA+AGG | + | chr3.3:71690538-71690557 | None:intergenic | 50.0% | |
| TCAACTCACGCCTCGGTATA+TGG | + | chr3.3:71691890-71691909 | None:intergenic | 50.0% | |
| TCATTCAGCTCATGTCTGGC+TGG | - | chr3.3:71690804-71690823 | MS.gene045226:intron | 50.0% | |
| TCGGCGGTGAGAATCATTTG+CGG | + | chr3.3:71687353-71687372 | None:intergenic | 50.0% | |
| TGGAGAGAAACTCCCGGAAA+TGG | - | chr3.3:71691156-71691175 | MS.gene045226:intron | 50.0% | |
| TGGTGGTTGAAGATCGGTGT+TGG | + | chr3.3:71687285-71687304 | None:intergenic | 50.0% | |
| ! | AGAAGCACGCGACATGATGA+TGG | - | chr3.3:71687250-71687269 | MS.gene045226:CDS | 50.0% |
| ! | GCGGTTGTTGTTGTTGAAGG+TGG | + | chr3.3:71687334-71687353 | None:intergenic | 50.0% |
| ! | GGAGCTTTGATCTCCATCTC+AGG | + | chr3.3:71687392-71687411 | None:intergenic | 50.0% |
| ! | GTCCCAAAAGGTGTGCATCT+TGG | - | chr3.3:71689010-71689029 | MS.gene045226:intron | 50.0% |
| ! | GTTGTTGTTGAAGGTGGTGG+TGG | + | chr3.3:71687328-71687347 | None:intergenic | 50.0% |
| !! | ACCGTGATTTTCTGGCACGT+CGG | - | chr3.3:71691794-71691813 | MS.gene045226:CDS | 50.0% |
| !!! | AGATGCACACCTTTTGGGAC+TGG | + | chr3.3:71689010-71689029 | None:intergenic | 50.0% |
| !!! | AGGCAATTAGGGCCGCTTTT+AGG | - | chr3.3:71691373-71691392 | MS.gene045226:intron | 50.0% |
| ACAGGCTATCGTGTTCCCTC+CGG | + | chr3.3:71688112-71688131 | None:intergenic | 55.0% | |
| AGGTTGACCACACAGGCCTT+CGG | - | chr3.3:71690519-71690538 | MS.gene045226:intron | 55.0% | |
| CAAAGAAACGCGCGGAAACC+TGG | - | chr3.3:71687411-71687430 | MS.gene045226:intron | 55.0% | |
| CACTCCGGAAGCCATAAAGG+AGG | - | chr3.3:71691353-71691372 | MS.gene045226:intron | 55.0% | |
| CAGGTTTCCGCGCGTTTCTT+TGG | + | chr3.3:71687413-71687432 | None:intergenic | 55.0% | |
| CCCGACGTGCCAGAAAATCA+CGG | + | chr3.3:71691798-71691817 | None:intergenic | 55.0% | |
| GACGAGACACGAAGCCTCAT+TGG | - | chr3.3:71687440-71687459 | MS.gene045226:intron | 55.0% | |
| GACTTGTGGCACAGATGCAC+AGG | - | chr3.3:71688731-71688750 | MS.gene045226:intron | 55.0% | |
| GCAGCAGATGTTGCAGCAAG+CGG | - | chr3.3:71691117-71691136 | MS.gene045226:intron | 55.0% | |
| GGGGAAAGTCAGTCTTGCTG+TGG | - | chr3.3:71691276-71691295 | MS.gene045226:intron | 55.0% | |
| TCGTGTCTCGTCTTGAACCC+AGG | + | chr3.3:71687432-71687451 | None:intergenic | 55.0% | |
| TCTCGCGTCGTAGACCAATG+AGG | + | chr3.3:71687457-71687476 | None:intergenic | 55.0% | |
| TGCAACATCTGCTGCGGCAA+TGG | + | chr3.3:71691112-71691131 | None:intergenic | 55.0% | |
| TGGCACTCCGGAAGCCATAA+AGG | - | chr3.3:71691350-71691369 | MS.gene045226:intron | 55.0% | |
| ! | CATTGGTCTACGACGCGAGA+TGG | - | chr3.3:71687457-71687476 | MS.gene045226:intron | 55.0% |
| ! | GCGAAGCATCATGATCGAGG+TGG | - | chr3.3:71687617-71687636 | MS.gene045226:CDS | 55.0% |
| ! | GCTTGCTGCAACATCTGCTG+CGG | + | chr3.3:71691118-71691137 | None:intergenic | 55.0% |
| !! | ATTTTCTGGCACGTCGGGCT+TGG | - | chr3.3:71691800-71691819 | MS.gene045226:CDS | 55.0% |
| !! | CATGATCGAGGTGGTGGAAG+TGG | - | chr3.3:71687626-71687645 | MS.gene045226:CDS | 55.0% |
| !! | CCGTGATTTTCTGGCACGTC+GGG | - | chr3.3:71691795-71691814 | MS.gene045226:CDS | 55.0% |
| !! | CGGTGGTGGTGGTTGAAGAT+CGG | + | chr3.3:71687291-71687310 | None:intergenic | 55.0% |
| !! | GTGGTGGAAGTGGTTCTGGT+GGG | - | chr3.3:71687636-71687655 | MS.gene045226:CDS | 55.0% |
| !! | TGAAGGTGGTGGTGGTGTTG+CGG | + | chr3.3:71687320-71687339 | None:intergenic | 55.0% |
| ACGCCTCGGTATATGGCACC+AGG | + | chr3.3:71691883-71691902 | None:intergenic | 60.0% | |
| ATTCTCACCGCCGAGAGCAG+CGG | - | chr3.3:71687359-71687378 | MS.gene045226:CDS | 60.0% | |
| CAGGCCTTCGGTCCGGTTTA+TGG | - | chr3.3:71690531-71690550 | MS.gene045226:intron | 60.0% | |
| CTGCGGATCACGGAAAACCG+CGG | + | chr3.3:71688382-71688401 | None:intergenic | 60.0% | |
| GCGGAGTCCCTCCTTGGAAT+TGG | - | chr3.3:71691136-71691155 | MS.gene045226:intron | 60.0% | |
| GTTGAACCAATCGGACCGGC+TGG | - | chr3.3:71690553-71690572 | MS.gene045226:intron | 60.0% | |
| TCTGCTGCGGCAATGGCAAG+AGG | + | chr3.3:71691105-71691124 | None:intergenic | 60.0% | |
| !! | CGAGGTGGTGGAAGTGGTTC+TGG | - | chr3.3:71687632-71687651 | MS.gene045226:CDS | 60.0% |
| !! | GGTGGTGGAAGTGGTTCTGG+TGG | - | chr3.3:71687635-71687654 | MS.gene045226:CDS | 60.0% |
| AACCGGACCGAAGGCCTGTG+TGG | + | chr3.3:71690529-71690548 | None:intergenic | 65.0% | |
| ACAGGACCAGCCGGTCCGAT+TGG | + | chr3.3:71690562-71690581 | None:intergenic | 65.0% | |
| AGGATCGTCGCCGCTGCTCT+CGG | + | chr3.3:71687372-71687391 | None:intergenic | 65.0% | |
| CAGCAAGCGGAGTCCCTCCT+TGG | - | chr3.3:71691130-71691149 | MS.gene045226:intron | 65.0% | |
| CAGCGGCGACGATCCTGAGA+TGG | - | chr3.3:71687376-71687395 | MS.gene045226:CDS | 65.0% | |
| GACCACACAGGCCTTCGGTC+CGG | - | chr3.3:71690524-71690543 | MS.gene045226:intron | 65.0% | |
| !! | AGGTGGTGGTGGTGTTGCGG+CGG | + | chr3.3:71687317-71687336 | None:intergenic | 65.0% |
| !! | CGGCCTGGTGCCATATACCG+AGG | - | chr3.3:71691877-71691896 | MS.gene045226:CDS | 65.0% |
| ATCGTCGCCGCTGCTCTCGG+CGG | + | chr3.3:71687369-71687388 | None:intergenic | 70.0% | |
| CTGGCACGTCGGGCTTGGAC+AGG | - | chr3.3:71691805-71691824 | MS.gene045226:CDS | 70.0% | |
| !! | TGGTGGTGGTGTTGCGGCGG+TGG | + | chr3.3:71687314-71687333 | None:intergenic | 70.0% |
| !! | TGGTGGTGTTGCGGCGGTGG+CGG | + | chr3.3:71687311-71687330 | None:intergenic | 70.0% |
| ! | TGTTGCGGCGGTGGCGGTGG+TGG | + | chr3.3:71687305-71687324 | None:intergenic | 75.0% |
| !! | TGGTGTTGCGGCGGTGGCGG+TGG | + | chr3.3:71687308-71687327 | None:intergenic | 75.0% |
| !! | TGCGGCGGTGGCGGTGGTGG+TGG | + | chr3.3:71687302-71687321 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 71687203 | 71691909 | 71687203 | ID=MS.gene045226 |
| chr3.3 | mRNA | 71687203 | 71691909 | 71687203 | ID=MS.gene045226.t1;Parent=MS.gene045226 |
| chr3.3 | exon | 71691408 | 71691909 | 71691408 | ID=MS.gene045226.t1.exon1;Parent=MS.gene045226.t1 |
| chr3.3 | CDS | 71691408 | 71691909 | 71691408 | ID=cds.MS.gene045226.t1;Parent=MS.gene045226.t1 |
| chr3.3 | exon | 71689390 | 71689428 | 71689390 | ID=MS.gene045226.t1.exon2;Parent=MS.gene045226.t1 |
| chr3.3 | CDS | 71689390 | 71689428 | 71689390 | ID=cds.MS.gene045226.t1;Parent=MS.gene045226.t1 |
| chr3.3 | exon | 71687935 | 71688063 | 71687935 | ID=MS.gene045226.t1.exon3;Parent=MS.gene045226.t1 |
| chr3.3 | CDS | 71687935 | 71688063 | 71687935 | ID=cds.MS.gene045226.t1;Parent=MS.gene045226.t1 |
| chr3.3 | exon | 71687614 | 71687838 | 71687614 | ID=MS.gene045226.t1.exon4;Parent=MS.gene045226.t1 |
| chr3.3 | CDS | 71687614 | 71687838 | 71687614 | ID=cds.MS.gene045226.t1;Parent=MS.gene045226.t1 |
| chr3.3 | exon | 71687203 | 71687405 | 71687203 | ID=MS.gene045226.t1.exon5;Parent=MS.gene045226.t1 |
| chr3.3 | CDS | 71687203 | 71687405 | 71687203 | ID=cds.MS.gene045226.t1;Parent=MS.gene045226.t1 |
| Gene Sequence |
| Protein sequence |
