Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067040.t1 | XP_024635745.1 | 99.2 | 365 | 3 | 0 | 1 | 365 | 1 | 365 | 5.00E-187 | 663.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067040.t1 | Q9FX53 | 69.5 | 334 | 63 | 5 | 66 | 364 | 76 | 405 | 4.8e-130 | 465.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067040.t1 | G7J2H9 | 92.8 | 390 | 3 | 1 | 1 | 365 | 1 | 390 | 5.3e-183 | 649.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene067040.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75566 | MS.gene067040 | PPI |
| MS.gene045226 | MS.gene067040 | PPI |
| MS.gene067040 | MS.gene045226 | PPI |
| MS.gene79125 | MS.gene067040 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067040.t1 | MTR_3g085960 | 93.077 | 390 | 2 | 1 | 1 | 365 | 1 | 390 | 0.0 | 745 |
| MS.gene067040.t1 | MTR_5g026540 | 36.364 | 121 | 69 | 3 | 50 | 168 | 19 | 133 | 1.92e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067040.t1 | AT1G13450 | 63.971 | 408 | 93 | 8 | 5 | 364 | 4 | 405 | 3.02e-173 | 488 |
| MS.gene067040.t1 | AT3G25990 | 63.003 | 373 | 92 | 3 | 21 | 364 | 16 | 371 | 1.50e-167 | 473 |
| MS.gene067040.t1 | AT1G13450 | 59.420 | 276 | 60 | 7 | 1 | 230 | 1 | 270 | 9.23e-94 | 281 |
| MS.gene067040.t1 | AT1G13450 | 59.420 | 276 | 60 | 7 | 1 | 230 | 1 | 270 | 9.23e-94 | 281 |
| MS.gene067040.t1 | AT1G13450 | 56.757 | 222 | 47 | 5 | 5 | 182 | 4 | 220 | 3.03e-65 | 207 |
| MS.gene067040.t1 | AT2G38250 | 43.878 | 98 | 43 | 2 | 40 | 137 | 17 | 102 | 1.63e-15 | 76.6 |
| MS.gene067040.t1 | AT5G01380 | 45.902 | 61 | 33 | 0 | 77 | 137 | 52 | 112 | 1.25e-11 | 65.5 |
Find 108 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCTAATTGCCTCCTTTA+TGG | 0.202289 | 3.4:+80207411 | None:intergenic |
| CAGGTTTCCGCGCGTTTCTT+TGG | 0.225470 | 3.4:+80211367 | None:intergenic |
| AAGCCATAAAGGAGGCAATT+AGG | 0.234916 | 3.4:-80207414 | MS.gene067040:CDS |
| GATGATGCCAACATTTCTTT+TGG | 0.253442 | 3.4:-80209088 | MS.gene067040:CDS |
| CGAAGTCGAATAAGCATCTT+TGG | 0.254316 | 3.4:-80211279 | MS.gene067040:CDS |
| CGACTATGTGTACTGATAAA+TGG | 0.279079 | 3.4:-80211210 | MS.gene067040:CDS |
| TCAACTCACGCCTCGGTATA+TGG | 0.284610 | 3.4:+80206888 | None:intergenic |
| CGAGGTGGTGGAAGTGGTTC+TGG | 0.294738 | 3.4:-80211145 | MS.gene067040:CDS |
| ATAGCATAGCTTACCATTTC+CGG | 0.308477 | 3.4:+80207606 | None:intergenic |
| TAAGAGAATTTGATGGTTAT+AGG | 0.317322 | 3.4:-80206945 | MS.gene067040:CDS |
| TGAGAACTAAACGTGCATTT+TGG | 0.331340 | 3.4:-80207378 | MS.gene067040:CDS |
| ATTGCCTCCTTTATGGCTTC+CGG | 0.339890 | 3.4:+80207418 | None:intergenic |
| TTATAGGAATATTGACAATA+TGG | 0.365204 | 3.4:-80206929 | MS.gene067040:CDS |
| CAAAGAAACGCGCGGAAACC+TGG | 0.365216 | 3.4:-80211366 | MS.gene067040:CDS |
| CTTCAGTATGCACAGGGATA+TGG | 0.367649 | 3.4:+80207031 | None:intergenic |
| ACTCAATCTTGAGAGAAGTT+TGG | 0.367954 | 3.4:-80207710 | MS.gene067040:CDS |
| GCGGAGTCCCTCCTTGGAAT+TGG | 0.368477 | 3.4:-80207639 | MS.gene067040:CDS |
| CTGGCACGTCGGGCTTGGAC+AGG | 0.391303 | 3.4:-80206970 | MS.gene067040:CDS |
| TGGTGGTGGTGTTGCGGCGG+TGG | 0.393366 | 3.4:+80211466 | None:intergenic |
| TGTTGCGGCGGTGGCGGTGG+TGG | 0.396652 | 3.4:+80211475 | None:intergenic |
| TAGCATAGCTTACCATTTCC+GGG | 0.400255 | 3.4:+80207607 | None:intergenic |
| TGCAACATCTGCTGCGGCAA+TGG | 0.406749 | 3.4:+80207666 | None:intergenic |
| AGCCATAAAGGAGGCAATTA+GGG | 0.407648 | 3.4:-80207413 | MS.gene067040:CDS |
| ATTGACCGTGACATGCCTAT+TGG | 0.408632 | 3.4:-80207325 | MS.gene067040:CDS |
| TGGTGTTGCGGCGGTGGCGG+TGG | 0.409366 | 3.4:+80211472 | None:intergenic |
| GAAGGGTTATATCAGTCAAA+TGG | 0.412587 | 3.4:-80207477 | MS.gene067040:CDS |
| TTCAGCGAAGATGAGAGAAA+AGG | 0.415899 | 3.4:-80211248 | MS.gene067040:CDS |
| GTCATATAGGCATACTTTGA+TGG | 0.420087 | 3.4:+80207062 | None:intergenic |
| TGGTGGTGTTGCGGCGGTGG+CGG | 0.425610 | 3.4:+80211469 | None:intergenic |
| TCTTCTTTGTAGAAATCGAT+TGG | 0.427495 | 3.4:+80211547 | None:intergenic |
| TGCGGCGGTGGCGGTGGTGG+TGG | 0.431040 | 3.4:+80211478 | None:intergenic |
| GACGAGACACGAAGCCTCAT+TGG | 0.438362 | 3.4:-80211337 | MS.gene067040:CDS |
| GGAGCTTTGATCTCCATCTC+AGG | 0.439885 | 3.4:+80211388 | None:intergenic |
| TCGTGTCTCGTCTTGAACCC+AGG | 0.453965 | 3.4:+80211348 | None:intergenic |
| GTTGTTGTTGAAGGTGGTGG+TGG | 0.455795 | 3.4:+80211452 | None:intergenic |
| TTTGCGGTTGTTGTTGTTGA+AGG | 0.456172 | 3.4:+80211443 | None:intergenic |
| TGGAGAGAAACTCCCGGAAA+TGG | 0.457751 | 3.4:-80207619 | MS.gene067040:intron |
| TGGCACTCCGGAAGCCATAA+AGG | 0.457915 | 3.4:-80207425 | MS.gene067040:CDS |
| AAGGGTTATATCAGTCAAAT+GGG | 0.461970 | 3.4:-80207476 | MS.gene067040:CDS |
| TGAAGAGTGTAATTTCCAAT+AGG | 0.462773 | 3.4:+80207310 | None:intergenic |
| TATGGTCAGACTCGTCATAT+AGG | 0.466782 | 3.4:+80207049 | None:intergenic |
| TCAGCGAAGATGAGAGAAAA+GGG | 0.467180 | 3.4:-80211247 | MS.gene067040:CDS |
| TACACTCTTCACCTTGATGA+AGG | 0.469365 | 3.4:-80207298 | MS.gene067040:intron |
| ATCTTCTCTTCAGTATGCAC+AGG | 0.472173 | 3.4:+80207024 | None:intergenic |
| CATGATCGAGGTGGTGGAAG+TGG | 0.472652 | 3.4:-80211151 | MS.gene067040:CDS |
| CAGCAAGCGGAGTCCCTCCT+TGG | 0.479134 | 3.4:-80207645 | MS.gene067040:CDS |
| CGGTGGTGGTGGTTGAAGAT+CGG | 0.482702 | 3.4:+80211489 | None:intergenic |
| CTTCTTTGTAGAAATCGATT+GGG | 0.484762 | 3.4:+80211548 | None:intergenic |
| TTCAAAGACATACCTTCAAC+GGG | 0.487539 | 3.4:+80209064 | None:intergenic |
| ACAGGTCTAAGAGAATTTGA+TGG | 0.489101 | 3.4:-80206952 | MS.gene067040:CDS |
| GTTGTTGTTGTTGAAGGTGG+TGG | 0.490511 | 3.4:+80211449 | None:intergenic |
| TATACCGAGGCGTGAGTTGA+GGG | 0.493005 | 3.4:-80206885 | None:intergenic |
| CATTGGTCTACGACGCGAGA+TGG | 0.494860 | 3.4:-80211320 | MS.gene067040:CDS |
| AGAAGCACGCGACATGATGA+TGG | 0.494994 | 3.4:-80211527 | MS.gene067040:CDS |
| ACAAGACGGATAGGTATTGA+TGG | 0.498257 | 3.4:-80207445 | MS.gene067040:CDS |
| AGGATCGTCGCCGCTGCTCT+CGG | 0.501790 | 3.4:+80211408 | None:intergenic |
| AAGCATCATGATCGAGGTGG+TGG | 0.503110 | 3.4:-80211157 | MS.gene067040:CDS |
| TTGACAATATGGATGATCTT+CGG | 0.509969 | 3.4:-80206918 | MS.gene067040:CDS |
| GCGGTTGTTGTTGTTGAAGG+TGG | 0.510579 | 3.4:+80211446 | None:intergenic |
| GCAGCAGATGTTGCAGCAAG+CGG | 0.510852 | 3.4:-80207658 | MS.gene067040:CDS |
| GAAGTCGAATAAGCATCTTT+GGG | 0.511026 | 3.4:-80211278 | MS.gene067040:CDS |
| GAGAGAAGTTTGGATCATGA+TGG | 0.523270 | 3.4:-80207700 | MS.gene067040:CDS |
| CCTGCCCTCAACTCACGCCT+CGG | 0.526894 | 3.4:+80206881 | None:intergenic |
| CTTCAAAGACATACCTTCAA+CGG | 0.531616 | 3.4:+80209063 | None:intergenic |
| AAAGTCAGTCTTGCTGTGGA+AGG | 0.533418 | 3.4:-80207495 | MS.gene067040:CDS |
| ATATACCGAGGCGTGAGTTG+AGG | 0.537639 | 3.4:-80206886 | None:intergenic |
| AACGGGTCCAAAAGAAATGT+TGG | 0.546852 | 3.4:+80209081 | None:intergenic |
| AGAGAAGTTTGGATCATGAT+GGG | 0.549925 | 3.4:-80207699 | MS.gene067040:CDS |
| AAAGAAACGCGCGGAAACCT+GGG | 0.551251 | 3.4:-80211365 | MS.gene067040:CDS |
| TGAAGGTGGTGGTGGTGTTG+CGG | 0.562582 | 3.4:+80211460 | None:intergenic |
| GGTGGTGGAAGTGGTTCTGG+TGG | 0.566673 | 3.4:-80211142 | MS.gene067040:CDS |
| CTTCTCTCAAGATTGAGTGT+TGG | 0.567585 | 3.4:+80207715 | None:intergenic |
| TTGTAGAAATCGATTGGGCG+AGG | 0.569863 | 3.4:+80211553 | None:intergenic |
| GGAGTTTCTCTCCAATTCCA+AGG | 0.571736 | 3.4:+80207628 | None:intergenic |
| AGGTGGTGGTGGTGTTGCGG+CGG | 0.579610 | 3.4:+80211463 | None:intergenic |
| AAAATCACGGTAATCATCCT+CGG | 0.581502 | 3.4:+80206993 | None:intergenic |
| TCGGCGGTGAGAATCATTTG+CGG | 0.586996 | 3.4:+80211427 | None:intergenic |
| ATTCTCACCGCCGAGAGCAG+CGG | 0.587631 | 3.4:-80211418 | MS.gene067040:CDS |
| TTTCTCTCCAATTCCAAGGA+GGG | 0.589209 | 3.4:+80207632 | None:intergenic |
| CAGCGGCGACGATCCTGAGA+TGG | 0.596039 | 3.4:-80211401 | MS.gene067040:CDS |
| AATATGGATGATCTTCGGCC+TGG | 0.596618 | 3.4:-80206913 | MS.gene067040:CDS |
| GGTGATTATACAAGACGGAT+AGG | 0.598109 | 3.4:-80207454 | MS.gene067040:CDS |
| TGGAATTGGAGAGAAACTCC+CGG | 0.599496 | 3.4:-80207625 | MS.gene067040:CDS |
| AAGTCAGTCTTGCTGTGGAA+GGG | 0.603947 | 3.4:-80207494 | MS.gene067040:CDS |
| ATTGAGCCCAACCTTCATCA+AGG | 0.614772 | 3.4:+80207287 | None:intergenic |
| GGGGAAAGTCAGTCTTGCTG+TGG | 0.620628 | 3.4:-80207499 | MS.gene067040:CDS |
| GATAGGTATTGATGGCACTC+CGG | 0.620845 | 3.4:-80207437 | MS.gene067040:CDS |
| CATTTATCAGTACACATAGT+CGG | 0.622025 | 3.4:+80211211 | None:intergenic |
| GTGGTGGAAGTGGTTCTGGT+GGG | 0.625269 | 3.4:-80211141 | MS.gene067040:CDS |
| TTTAGTTCTCAACCTAAAAG+CGG | 0.625441 | 3.4:+80207390 | None:intergenic |
| TCTGCTGCGGCAATGGCAAG+AGG | 0.628811 | 3.4:+80207673 | None:intergenic |
| ACGCCTCGGTATATGGCACC+AGG | 0.628824 | 3.4:+80206895 | None:intergenic |
| GCTTGCTGCAACATCTGCTG+CGG | 0.629023 | 3.4:+80207660 | None:intergenic |
| TGGTGGTTGAAGATCGGTGT+TGG | 0.640907 | 3.4:+80211495 | None:intergenic |
| CTATGTGTACTGATAAATGG+AGG | 0.647821 | 3.4:-80211207 | MS.gene067040:CDS |
| CCCGACGTGCCAGAAAATCA+CGG | 0.651686 | 3.4:+80206980 | None:intergenic |
| ATCGTCGCCGCTGCTCTCGG+CGG | 0.657648 | 3.4:+80211411 | None:intergenic |
| CGGCCTGGTGCCATATACCG+AGG | 0.668670 | 3.4:-80206898 | MS.gene067040:CDS |
| AATTTCCAATAGGCATGTCA+CGG | 0.669198 | 3.4:+80207320 | None:intergenic |
| AATGGGGTGATTATACAAGA+CGG | 0.669804 | 3.4:-80207459 | MS.gene067040:CDS |
| AAAGCGAAGCATCATGATCG+AGG | 0.672309 | 3.4:-80211163 | MS.gene067040:CDS |
| TCTTCTCTTCAGTATGCACA+GGG | 0.678271 | 3.4:+80207025 | None:intergenic |
| GTTTCTCTCCAATTCCAAGG+AGG | 0.688298 | 3.4:+80207631 | None:intergenic |
| TCTCGCGTCGTAGACCAATG+AGG | 0.690034 | 3.4:+80211323 | None:intergenic |
| CAAAGCTCCAAAGAAACGCG+CGG | 0.692450 | 3.4:-80211374 | MS.gene067040:CDS |
| CACTCCGGAAGCCATAAAGG+AGG | 0.698747 | 3.4:-80207422 | MS.gene067040:CDS |
| GCGAAGCATCATGATCGAGG+TGG | 0.709157 | 3.4:-80211160 | MS.gene067040:CDS |
| AGGGTTATATCAGTCAAATG+GGG | 0.717478 | 3.4:-80207475 | MS.gene067040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATAATAAAAGCTTA+AGG | + | chr3.4:80208955-80208974 | None:intergenic | 10.0% |
| !!! | AGTATATATATATTTTTTAG+GGG | - | chr3.4:80209948-80209967 | MS.gene067040:intron | 10.0% |
| !! | AATAATATGTATTCACAAAA+TGG | - | chr3.4:80209837-80209856 | MS.gene067040:intron | 15.0% |
| !! | ATAATATGTATTCACAAAAT+GGG | - | chr3.4:80209838-80209857 | MS.gene067040:intron | 15.0% |
| !! | CTATAATATATTAACCTATT+AGG | + | chr3.4:80210032-80210051 | None:intergenic | 15.0% |
| !! | GAAAAATATGAAATAATCTT+AGG | + | chr3.4:80209476-80209495 | None:intergenic | 15.0% |
| !! | GATAATAATAATAATGTTTG+TGG | - | chr3.4:80207526-80207545 | MS.gene067040:intron | 15.0% |
| !!! | ATTTGAATTTTCATTTCAAT+AGG | + | chr3.4:80210417-80210436 | None:intergenic | 15.0% |
| !!! | TTATTTTACTTTTAATGTCT+AGG | - | chr3.4:80211233-80211252 | MS.gene067040:CDS | 15.0% |
| !!! | TTTTAATTAAGATAAACTGA+TGG | + | chr3.4:80210571-80210590 | None:intergenic | 15.0% |
| !! | AACAATATATTATCATTTGC+AGG | - | chr3.4:80211372-80211391 | MS.gene067040:CDS | 20.0% |
| !! | AGAACATATATATAACAATC+TGG | - | chr3.4:80210166-80210185 | MS.gene067040:intron | 20.0% |
| !! | ATTACCAATTCACTTAAATT+CGG | + | chr3.4:80209240-80209259 | None:intergenic | 20.0% |
| !! | CATATAACGATAAAAAGAAT+TGG | - | chr3.4:80210363-80210382 | MS.gene067040:intron | 20.0% |
| !! | TAAAGGATTTAGATATATGT+GGG | - | chr3.4:80210627-80210646 | MS.gene067040:intron | 20.0% |
| !! | TACAAAATATCATGAAATAG+CGG | - | chr3.4:80208004-80208023 | MS.gene067040:intron | 20.0% |
| !! | TACAAAATATTGTCAAATAG+CGG | - | chr3.4:80208840-80208859 | MS.gene067040:intron | 20.0% |
| !! | TTAAAGGATTTAGATATATG+TGG | - | chr3.4:80210626-80210645 | MS.gene067040:intron | 20.0% |
| !! | TTATAGGAATATTGACAATA+TGG | - | chr3.4:80211533-80211552 | MS.gene067040:CDS | 20.0% |
| !!! | ATAGTTAGGTTTTTAATAGT+CGG | + | chr3.4:80208624-80208643 | None:intergenic | 20.0% |
| !!! | ATTTTGTACTAAATAGCATA+TGG | + | chr3.4:80208828-80208847 | None:intergenic | 20.0% |
| !!! | CAATTCTTTTTATCGTTATA+TGG | + | chr3.4:80210365-80210384 | None:intergenic | 20.0% |
| !!! | GTTTAAAACTTTTATAACTC+CGG | - | chr3.4:80208354-80208373 | MS.gene067040:intron | 20.0% |
| !!! | TCATTTTTTTCTTCTTCTTT+AGG | - | chr3.4:80210892-80210911 | MS.gene067040:intron | 20.0% |
| !!! | TGGATAATTGTTTATGTTTT+TGG | - | chr3.4:80207572-80207591 | MS.gene067040:intron | 20.0% |
| !!! | TTTAAAACTTTTATAACTCC+GGG | - | chr3.4:80208355-80208374 | MS.gene067040:intron | 20.0% |
| !!! | TTTTTCTTTACTCCAAATTT+CGG | + | chr3.4:80208992-80209011 | None:intergenic | 20.0% |
| ! | ACATTATGGCTTGAAATATT+AGG | - | chr3.4:80208554-80208573 | MS.gene067040:intron | 25.0% |
| ! | ATGGAATGTTTACAAGAAAA+AGG | + | chr3.4:80210346-80210365 | None:intergenic | 25.0% |
| ! | CAGTTACAAAAAGAATAGTT+AGG | + | chr3.4:80208638-80208657 | None:intergenic | 25.0% |
| ! | CTTAAACGATAATAATACTG+CGG | - | chr3.4:80207918-80207937 | MS.gene067040:intron | 25.0% |
| ! | TATAAATCACTGCAATTTGA+AGG | - | chr3.4:80209174-80209193 | MS.gene067040:intron | 25.0% |
| ! | TATATTATCATTTGCAGGAA+TGG | - | chr3.4:80211377-80211396 | MS.gene067040:CDS | 25.0% |
| ! | TCTTACATGCAATTTGATAA+AGG | - | chr3.4:80207443-80207462 | MS.gene067040:CDS | 25.0% |
| ! | TTGTACTAAATACTCTATTG+TGG | + | chr3.4:80207989-80208008 | None:intergenic | 25.0% |
| ! | TTTGGAAAATGTAGTTGATT+AGG | + | chr3.4:80208661-80208680 | None:intergenic | 25.0% |
| !! | CACATATTGAAATGTTACTT+TGG | - | chr3.4:80210387-80210406 | MS.gene067040:intron | 25.0% |
| !! | TAAGAGAATTTGATGGTTAT+AGG | - | chr3.4:80211517-80211536 | MS.gene067040:CDS | 25.0% |
| !! | TAGTTAGGTTTTTAATAGTC+GGG | + | chr3.4:80208623-80208642 | None:intergenic | 25.0% |
| !! | TTAAAACTTTTATAACTCCG+GGG | - | chr3.4:80208356-80208375 | MS.gene067040:intron | 25.0% |
| !! | TTGTTTAAAGTTCATGTACT+GGG | - | chr3.4:80211266-80211285 | MS.gene067040:CDS | 25.0% |
| !!! | AAGTGAATCTTTTAGAATGT+CGG | - | chr3.4:80208114-80208133 | MS.gene067040:intron | 25.0% |
| !!! | ATTTGATTTGATGCTATGTT+TGG | - | chr3.4:80207552-80207571 | MS.gene067040:intron | 25.0% |
| !!! | GCTATTTTACATGTTTGTAT+CGG | - | chr3.4:80208726-80208745 | MS.gene067040:intron | 25.0% |
| !!! | GGTATCTTTTTCAAACATTA+TGG | - | chr3.4:80208540-80208559 | MS.gene067040:intron | 25.0% |
| !!! | TTCTTTTGTAAAAAGTGCAT+CGG | + | chr3.4:80207861-80207880 | None:intergenic | 25.0% |
| AAAATTCCACTACGTTATAG+TGG | + | chr3.4:80208784-80208803 | None:intergenic | 30.0% | |
| AACTGTTCCTAAAGACAAAA+TGG | + | chr3.4:80209323-80209342 | None:intergenic | 30.0% | |
| AAGAAAAAGGAACAGCAAAA+GGG | + | chr3.4:80210333-80210352 | None:intergenic | 30.0% | |
| AAGGGTTATATCAGTCAAAT+GGG | - | chr3.4:80210986-80211005 | MS.gene067040:intron | 30.0% | |
| AATGTCCAGTAGTAGTATTT+AGG | - | chr3.4:80210589-80210608 | MS.gene067040:intron | 30.0% | |
| ACAAATTTGGTCCAAAAAGA+AGG | - | chr3.4:80208509-80208528 | MS.gene067040:intron | 30.0% | |
| ACTGTTCCTAAAGACAAAAT+GGG | + | chr3.4:80209322-80209341 | None:intergenic | 30.0% | |
| ACTTCATAATACAAGAAGCA+CGG | + | chr3.4:80208580-80208599 | None:intergenic | 30.0% | |
| AGACCTGATATCAATTGATA+TGG | + | chr3.4:80209105-80209124 | None:intergenic | 30.0% | |
| ATGTCCAGTAGTAGTATTTA+GGG | - | chr3.4:80210590-80210609 | MS.gene067040:intron | 30.0% | |
| CAAACCGAATTTAAGTGAAT+TGG | - | chr3.4:80209233-80209252 | MS.gene067040:intron | 30.0% | |
| CAAATTTGGTCCAAAAAGAA+GGG | - | chr3.4:80208510-80208529 | MS.gene067040:intron | 30.0% | |
| CACTATAATTCGAAACAAAC+AGG | + | chr3.4:80207815-80207834 | None:intergenic | 30.0% | |
| CATTTATCAGTACACATAGT+CGG | + | chr3.4:80207254-80207273 | None:intergenic | 30.0% | |
| CTGTTTGTTTCGAATTATAG+TGG | - | chr3.4:80207813-80207832 | MS.gene067040:intron | 30.0% | |
| CTTCTTTGTAGAAATCGATT+GGG | + | chr3.4:80206917-80206936 | None:intergenic | 30.0% | |
| GACCTGATATCAATTGATAT+GGG | + | chr3.4:80209104-80209123 | None:intergenic | 30.0% | |
| GCTATATCATAATTGCATAG+TGG | - | chr3.4:80208029-80208048 | MS.gene067040:intron | 30.0% | |
| TATGTTCATTAACAATGCAC+TGG | - | chr3.4:80210138-80210157 | MS.gene067040:intron | 30.0% | |
| TATTGTTACGTCAACAGAAA+CGG | + | chr3.4:80211359-80211378 | None:intergenic | 30.0% | |
| TCAGCTCATAAAAATCATGT+AGG | - | chr3.4:80209494-80209513 | MS.gene067040:intron | 30.0% | |
| TCTCATCATTCTCAAATACT+TGG | - | chr3.4:80210706-80210725 | MS.gene067040:intron | 30.0% | |
| TCTGGTTATTGCAATTTACT+AGG | - | chr3.4:80210465-80210484 | MS.gene067040:intron | 30.0% | |
| TCTTCTTTGTAGAAATCGAT+TGG | + | chr3.4:80206918-80206937 | None:intergenic | 30.0% | |
| TTCTTTGTGAAACCGAAATT+TGG | - | chr3.4:80208977-80208996 | MS.gene067040:intron | 30.0% | |
| TTGACAATATGGATGATCTT+CGG | - | chr3.4:80211544-80211563 | MS.gene067040:CDS | 30.0% | |
| TTGTACTAAATAGCATATGG+TGG | + | chr3.4:80208825-80208844 | None:intergenic | 30.0% | |
| ! | AAAGTGATTTGTGAATACTC+TGG | - | chr3.4:80208204-80208223 | MS.gene067040:intron | 30.0% |
| ! | AAGTGATTTGTGAATACTCT+GGG | - | chr3.4:80208205-80208224 | MS.gene067040:intron | 30.0% |
| ! | AAGTGTTGTCAATAACAAGT+TGG | + | chr3.4:80208396-80208415 | None:intergenic | 30.0% |
| ! | ACATGAAGGAACTTTTACTT+TGG | + | chr3.4:80210685-80210704 | None:intergenic | 30.0% |
| ! | AGAGAAGATATTTTATACCG+AGG | - | chr3.4:80211452-80211471 | MS.gene067040:CDS | 30.0% |
| ! | ATTTTCCAATACAGCAATCT+AGG | + | chr3.4:80209565-80209584 | None:intergenic | 30.0% |
| ! | GAAGATTCAACTTTAGAAGT+AGG | + | chr3.4:80207425-80207444 | None:intergenic | 30.0% |
| ! | GTTGTTTAAAGTTCATGTAC+TGG | - | chr3.4:80211265-80211284 | MS.gene067040:CDS | 30.0% |
| ! | TCTTTTTGGACCAAATTTGT+TGG | + | chr3.4:80208509-80208528 | None:intergenic | 30.0% |
| ! | TGAAGAGTGTAATTTCCAAT+AGG | + | chr3.4:80211155-80211174 | None:intergenic | 30.0% |
| !! | ACTATAACGTAGTGGAATTT+TGG | - | chr3.4:80208783-80208802 | MS.gene067040:intron | 30.0% |
| !! | CTATAACGTAGTGGAATTTT+GGG | - | chr3.4:80208784-80208803 | MS.gene067040:intron | 30.0% |
| !! | GATACTGGTTCTTACTATTA+TGG | - | chr3.4:80210935-80210954 | MS.gene067040:intron | 30.0% |
| !! | GTAAAGAAAAAGCATTGAGT+TGG | - | chr3.4:80209001-80209020 | MS.gene067040:intron | 30.0% |
| !! | TGCTTTCTTATTTCTGATAC+TGG | - | chr3.4:80210920-80210939 | MS.gene067040:intron | 30.0% |
| !! | TTTAGTTCTCAACCTAAAAG+CGG | + | chr3.4:80211075-80211094 | None:intergenic | 30.0% |
| !!! | AAAGTTTTAAACACCATCAC+TGG | + | chr3.4:80208346-80208365 | None:intergenic | 30.0% |
| !!! | TGTGACTTTTGAGGTAATAA+TGG | - | chr3.4:80208288-80208307 | MS.gene067040:intron | 30.0% |
| AAAATCACGGTAATCATCCT+CGG | + | chr3.4:80211472-80211491 | None:intergenic | 35.0% | |
| AATGGGGTGATTATACAAGA+CGG | - | chr3.4:80211003-80211022 | MS.gene067040:intron | 35.0% | |
| AATTTCCAATAGGCATGTCA+CGG | + | chr3.4:80211145-80211164 | None:intergenic | 35.0% | |
| ACAGGTCTAAGAGAATTTGA+TGG | - | chr3.4:80211510-80211529 | MS.gene067040:CDS | 35.0% | |
| ACTAATGTGGCAAATACATG+GGG | - | chr3.4:80208169-80208188 | MS.gene067040:intron | 35.0% | |
| ACTCAATCTTGAGAGAAGTT+TGG | - | chr3.4:80210752-80210771 | MS.gene067040:intron | 35.0% | |
| ACTTTGACCAGTATTCAACT+TGG | + | chr3.4:80209641-80209660 | None:intergenic | 35.0% | |
| AGAGAAGTTTGGATCATGAT+GGG | - | chr3.4:80210763-80210782 | MS.gene067040:intron | 35.0% | |
| AGCCCATATCAATTGATATC+AGG | - | chr3.4:80209099-80209118 | MS.gene067040:intron | 35.0% | |
| AGGATTAGAACCAAACCAAA+TGG | + | chr3.4:80209545-80209564 | None:intergenic | 35.0% | |
| AGGGTTATATCAGTCAAATG+GGG | - | chr3.4:80210987-80211006 | MS.gene067040:intron | 35.0% | |
| AGTAGTAGTATTTAGGGAAG+GGG | - | chr3.4:80210596-80210615 | MS.gene067040:intron | 35.0% | |
| AGTGTATGCCCTAAATGTAA+GGG | + | chr3.4:80211308-80211327 | None:intergenic | 35.0% | |
| ATAGCATAGCTTACCATTTC+CGG | + | chr3.4:80210859-80210878 | None:intergenic | 35.0% | |
| CAAGAAAAAGGAACAGCAAA+AGG | + | chr3.4:80210334-80210353 | None:intergenic | 35.0% | |
| CACTACGTTATAGTGGTATA+GGG | + | chr3.4:80208777-80208796 | None:intergenic | 35.0% | |
| CAGTAGTAGTATTTAGGGAA+GGG | - | chr3.4:80210595-80210614 | MS.gene067040:intron | 35.0% | |
| CTAATCCTAGATTGCTGTAT+TGG | - | chr3.4:80209557-80209576 | MS.gene067040:intron | 35.0% | |
| CTTCAAAGACATACCTTCAA+CGG | + | chr3.4:80209402-80209421 | None:intergenic | 35.0% | |
| GAAGGGTTATATCAGTCAAA+TGG | - | chr3.4:80210985-80211004 | MS.gene067040:intron | 35.0% | |
| GAAGTCGAATAAGCATCTTT+GGG | - | chr3.4:80207184-80207203 | MS.gene067040:intron | 35.0% | |
| GACTAATGTGGCAAATACAT+GGG | - | chr3.4:80208168-80208187 | MS.gene067040:intron | 35.0% | |
| GAGAATGATGAGAAACATGA+AGG | + | chr3.4:80210699-80210718 | None:intergenic | 35.0% | |
| GTCATATAGGCATACTTTGA+TGG | + | chr3.4:80211403-80211422 | None:intergenic | 35.0% | |
| GTGAATTTAACTGCTACCAT+AGG | - | chr3.4:80210297-80210316 | MS.gene067040:intron | 35.0% | |
| GTGCTTCTTGTATTATGAAG+TGG | - | chr3.4:80208579-80208598 | MS.gene067040:intron | 35.0% | |
| GTGTGGTGTGAAATAAAATC+CGG | - | chr3.4:80207775-80207794 | MS.gene067040:intron | 35.0% | |
| TAACCTATTAGGTCCAATCT+CGG | + | chr3.4:80210021-80210040 | None:intergenic | 35.0% | |
| TCAACCAAGTCCAACAAATT+TGG | - | chr3.4:80208496-80208515 | MS.gene067040:intron | 35.0% | |
| TCCTACAGATTACACTAGTA+CGG | + | chr3.4:80210441-80210460 | None:intergenic | 35.0% | |
| TGGCAGAGATTTGATCTAAT+AGG | - | chr3.4:80210186-80210205 | MS.gene067040:intron | 35.0% | |
| TGGTAAGCTATGCTATGTAA+AGG | - | chr3.4:80210863-80210882 | MS.gene067040:intron | 35.0% | |
| TGTAATCTGTAGGAATGTTC+TGG | - | chr3.4:80210447-80210466 | MS.gene067040:intron | 35.0% | |
| TTAAGAGAGAGAAGTAAGTG+TGG | - | chr3.4:80207377-80207396 | MS.gene067040:CDS | 35.0% | |
| TTCAAAGACATACCTTCAAC+GGG | + | chr3.4:80209401-80209420 | None:intergenic | 35.0% | |
| TTCTTACTATTATGGCAGGT+GGG | - | chr3.4:80210943-80210962 | MS.gene067040:intron | 35.0% | |
| TTGCCACATTAGTCCTTAAT+GGG | + | chr3.4:80208162-80208181 | None:intergenic | 35.0% | |
| TTGGTTGAATGCTAACTCTT+TGG | + | chr3.4:80208484-80208503 | None:intergenic | 35.0% | |
| TTGTTGACCCCTTACATTTA+GGG | - | chr3.4:80211297-80211316 | MS.gene067040:CDS | 35.0% | |
| TTTGCCACATTAGTCCTTAA+TGG | + | chr3.4:80208163-80208182 | None:intergenic | 35.0% | |
| TTTGTTGACCCCTTACATTT+AGG | - | chr3.4:80211296-80211315 | MS.gene067040:CDS | 35.0% | |
| ! | AATACTTGGCAATTAGCTTC+TGG | - | chr3.4:80210720-80210739 | MS.gene067040:intron | 35.0% |
| ! | AATAGCATATGGTGGAACAA+TGG | + | chr3.4:80208817-80208836 | None:intergenic | 35.0% |
| ! | ATTCGGTTTGATGATTCAAG+AGG | + | chr3.4:80209223-80209242 | None:intergenic | 35.0% |
| ! | ATTTCGCCCATTTTGTCTTT+AGG | - | chr3.4:80209313-80209332 | MS.gene067040:intron | 35.0% |
| ! | CGACTATGTGTACTGATAAA+TGG | - | chr3.4:80207252-80207271 | MS.gene067040:intron | 35.0% |
| ! | CGTAAAGAATGTGACTTTTG+AGG | - | chr3.4:80208279-80208298 | MS.gene067040:intron | 35.0% |
| ! | CTATGTGTACTGATAAATGG+AGG | - | chr3.4:80207255-80207274 | MS.gene067040:intron | 35.0% |
| ! | CTTGATTAGTTGATTCCATG+TGG | - | chr3.4:80209519-80209538 | MS.gene067040:intron | 35.0% |
| ! | GATGATGCCAACATTTCTTT+TGG | - | chr3.4:80209374-80209393 | MS.gene067040:intron | 35.0% |
| ! | GCAAATACATGGGGTTTTTA+TGG | - | chr3.4:80208178-80208197 | MS.gene067040:intron | 35.0% |
| ! | GCTAACTTGTGCAAATTTCA+TGG | - | chr3.4:80211209-80211228 | MS.gene067040:CDS | 35.0% |
| ! | TATTGACAACACTTGACTTG+TGG | - | chr3.4:80208402-80208421 | MS.gene067040:intron | 35.0% |
| ! | TGAGAACTAAACGTGCATTT+TGG | - | chr3.4:80211084-80211103 | MS.gene067040:intron | 35.0% |
| ! | TTCGGTTTGATGATTCAAGA+GGG | + | chr3.4:80209222-80209241 | None:intergenic | 35.0% |
| ! | TTGACAAATAGCAGCTTTAG+CGG | - | chr3.4:80208751-80208770 | MS.gene067040:intron | 35.0% |
| ! | TTGCATAGTGGAATTTGAAC+AGG | - | chr3.4:80208041-80208060 | MS.gene067040:intron | 35.0% |
| !! | AACTAAACGTGCATTTTGGT+TGG | - | chr3.4:80211088-80211107 | MS.gene067040:intron | 35.0% |
| !! | GGGATATCGTTTTGATGTTT+AGG | - | chr3.4:80210647-80210666 | MS.gene067040:intron | 35.0% |
| !! | TGAGAGAAAAGGGTTTTGAT+CGG | - | chr3.4:80207225-80207244 | MS.gene067040:intron | 35.0% |
| AACGGGTCCAAAAGAAATGT+TGG | + | chr3.4:80209384-80209403 | None:intergenic | 40.0% | |
| AAGCCATAAAGGAGGCAATT+AGG | - | chr3.4:80211048-80211067 | MS.gene067040:intron | 40.0% | |
| ACCAGTATTCAACTTGGCTA+GGG | + | chr3.4:80209635-80209654 | None:intergenic | 40.0% | |
| ACTGCAATTTGAAGGTTCTC+AGG | - | chr3.4:80209182-80209201 | MS.gene067040:intron | 40.0% | |
| AGATTTGTCCCTAAAATCGG+TGG | - | chr3.4:80207712-80207731 | MS.gene067040:CDS | 40.0% | |
| AGCCATAAAGGAGGCAATTA+GGG | - | chr3.4:80211049-80211068 | MS.gene067040:intron | 40.0% | |
| ATCTTCTCTTCAGTATGCAC+AGG | + | chr3.4:80211441-80211460 | None:intergenic | 40.0% | |
| ATGACTCAGAACAGCAACTA+GGG | + | chr3.4:80209267-80209286 | None:intergenic | 40.0% | |
| ATGTTGTCTATTGCAGAGTG+TGG | + | chr3.4:80208921-80208940 | None:intergenic | 40.0% | |
| CACTCTGCAATAGACAACAT+TGG | - | chr3.4:80208921-80208940 | MS.gene067040:intron | 40.0% | |
| CAGAAACGGTGCACAAAATA+CGG | + | chr3.4:80211345-80211364 | None:intergenic | 40.0% | |
| CAGTGTATGCCCTAAATGTA+AGG | + | chr3.4:80211309-80211328 | None:intergenic | 40.0% | |
| CCACTACGTTATAGTGGTAT+AGG | + | chr3.4:80208778-80208797 | None:intergenic | 40.0% | |
| CCAGTAGTAGTATTTAGGGA+AGG | - | chr3.4:80210594-80210613 | MS.gene067040:intron | 40.0% | |
| CCCAGATTTGTCCCTAAAAT+CGG | - | chr3.4:80207709-80207728 | MS.gene067040:CDS | 40.0% | |
| CCTATACCACTATAACGTAG+TGG | - | chr3.4:80208775-80208794 | MS.gene067040:intron | 40.0% | |
| CCTTCCCTAAATACTACTAC+TGG | + | chr3.4:80210597-80210616 | None:intergenic | 40.0% | |
| CGAACTTCCTAAAGCTATAC+AGG | + | chr3.4:80209027-80209046 | None:intergenic | 40.0% | |
| CGAAGTCGAATAAGCATCTT+TGG | - | chr3.4:80207183-80207202 | MS.gene067040:intron | 40.0% | |
| CGGTTTATGGTTGAACCAAT+CGG | - | chr3.4:80210231-80210250 | MS.gene067040:intron | 40.0% | |
| CTGCAATTTGAAGGTTCTCA+GGG | - | chr3.4:80209183-80209202 | MS.gene067040:intron | 40.0% | |
| CTTCTCTCAAGATTGAGTGT+TGG | + | chr3.4:80210750-80210769 | None:intergenic | 40.0% | |
| GACTTATTATGTTGCTGTGC+AGG | - | chr3.4:80209347-80209366 | MS.gene067040:intron | 40.0% | |
| GAGAGAAGTTTGGATCATGA+TGG | - | chr3.4:80210762-80210781 | MS.gene067040:intron | 40.0% | |
| GGACTAATGTGGCAAATACA+TGG | - | chr3.4:80208167-80208186 | MS.gene067040:intron | 40.0% | |
| GGTGATTATACAAGACGGAT+AGG | - | chr3.4:80211008-80211027 | MS.gene067040:intron | 40.0% | |
| GGTGTGAAATAAAATCCGGA+GGG | - | chr3.4:80207779-80207798 | MS.gene067040:intron | 40.0% | |
| GTAGTAGTATTTAGGGAAGG+GGG | - | chr3.4:80210597-80210616 | MS.gene067040:intron | 40.0% | |
| GTGTATGCCCTAAATGTAAG+GGG | + | chr3.4:80211307-80211326 | None:intergenic | 40.0% | |
| GTTCTTACTATTATGGCAGG+TGG | - | chr3.4:80210942-80210961 | MS.gene067040:intron | 40.0% | |
| TACACTCTTCACCTTGATGA+AGG | - | chr3.4:80211164-80211183 | MS.gene067040:CDS | 40.0% | |
| TAGCATAGCTTACCATTTCC+GGG | + | chr3.4:80210858-80210877 | None:intergenic | 40.0% | |
| TATAGCAATCTAGCCGAGAT+TGG | - | chr3.4:80210005-80210024 | MS.gene067040:intron | 40.0% | |
| TATGGTCAGACTCGTCATAT+AGG | + | chr3.4:80211416-80211435 | None:intergenic | 40.0% | |
| TATGTAGGCTTTCAAACGTG+TGG | - | chr3.4:80207758-80207777 | MS.gene067040:intron | 40.0% | |
| TCACAAGTGCGTGTTTATGT+AGG | - | chr3.4:80207743-80207762 | MS.gene067040:intron | 40.0% | |
| TCAGCGAAGATGAGAGAAAA+GGG | - | chr3.4:80207215-80207234 | MS.gene067040:intron | 40.0% | |
| TCCAAAAAGAAGGGCTGATT+TGG | - | chr3.4:80208519-80208538 | MS.gene067040:intron | 40.0% | |
| TCTTACTATTATGGCAGGTG+GGG | - | chr3.4:80210944-80210963 | MS.gene067040:intron | 40.0% | |
| TCTTCACCTTGATGAAGGTT+GGG | - | chr3.4:80211169-80211188 | MS.gene067040:CDS | 40.0% | |
| TCTTCTCTTCAGTATGCACA+GGG | + | chr3.4:80211440-80211459 | None:intergenic | 40.0% | |
| TGATAGCACTTGCACAAACA+GGG | - | chr3.4:80208088-80208107 | MS.gene067040:intron | 40.0% | |
| TGCAATTTGAAGGTTCTCAG+GGG | - | chr3.4:80209184-80209203 | MS.gene067040:intron | 40.0% | |
| TGGTGTGAAATAAAATCCGG+AGG | - | chr3.4:80207778-80207797 | MS.gene067040:intron | 40.0% | |
| TTCAGCGAAGATGAGAGAAA+AGG | - | chr3.4:80207214-80207233 | MS.gene067040:intron | 40.0% | |
| TTCATATCCTGCTACGCAAA+AGG | + | chr3.4:80207951-80207970 | None:intergenic | 40.0% | |
| TTGTCAAATAGCGGCTATAG+TGG | - | chr3.4:80208849-80208868 | MS.gene067040:intron | 40.0% | |
| TTTCTCTCCAATTCCAAGGA+GGG | + | chr3.4:80210833-80210852 | None:intergenic | 40.0% | |
| ! | AACCAAGATGCACACCTTTT+GGG | + | chr3.4:80208700-80208719 | None:intergenic | 40.0% |
| ! | ACCAAATCAGCCCTTCTTTT+TGG | + | chr3.4:80208523-80208542 | None:intergenic | 40.0% |
| ! | ATCTAATAGGTTGACCACAC+AGG | - | chr3.4:80210199-80210218 | MS.gene067040:intron | 40.0% |
| ! | ATGGGCTGAGTATCTACTAA+GGG | + | chr3.4:80209086-80209105 | None:intergenic | 40.0% |
| ! | ATTTCTTTTGGACCCGTTGA+AGG | - | chr3.4:80209386-80209405 | MS.gene067040:intron | 40.0% |
| ! | CGAATTATAGTGGAAGCATG+CGG | - | chr3.4:80207823-80207842 | MS.gene067040:intron | 40.0% |
| ! | CGATTGGTTCAACCATAAAC+CGG | + | chr3.4:80210233-80210252 | None:intergenic | 40.0% |
| ! | CTGGTTCTTACTATTATGGC+AGG | - | chr3.4:80210939-80210958 | MS.gene067040:intron | 40.0% |
| ! | CTGTTCTGAGTCATGACATT+TGG | - | chr3.4:80209273-80209292 | MS.gene067040:intron | 40.0% |
| ! | GGATGATTACCGTGATTTTC+TGG | - | chr3.4:80211473-80211492 | MS.gene067040:CDS | 40.0% |
| ! | GTTTGATGATTCAAGAGGGT+AGG | + | chr3.4:80209218-80209237 | None:intergenic | 40.0% |
| ! | TAACCAAGATGCACACCTTT+TGG | + | chr3.4:80208701-80208720 | None:intergenic | 40.0% |
| ! | TATGGGCTGAGTATCTACTA+AGG | + | chr3.4:80209087-80209106 | None:intergenic | 40.0% |
| ! | TGGATTTAAGTTTGATGCCC+CGG | + | chr3.4:80208376-80208395 | None:intergenic | 40.0% |
| ! | TTCAACTTGGCTAGGGTATT+AGG | + | chr3.4:80209628-80209647 | None:intergenic | 40.0% |
| ! | TTGATAGCACTTGCACAAAC+AGG | - | chr3.4:80208087-80208106 | MS.gene067040:intron | 40.0% |
| ! | TTTGCGGTTGTTGTTGTTGA+AGG | + | chr3.4:80207022-80207041 | None:intergenic | 40.0% |
| !! | ACAAGACGGATAGGTATTGA+TGG | - | chr3.4:80211017-80211036 | MS.gene067040:intron | 40.0% |
| !! | ACCGATTTTAGGGACAAATC+TGG | + | chr3.4:80207713-80207732 | None:intergenic | 40.0% |
| !! | ATAGCTTTAGGAAGTTCGCT+TGG | - | chr3.4:80209029-80209048 | MS.gene067040:intron | 40.0% |
| !! | CCGATTTTAGGGACAAATCT+GGG | + | chr3.4:80207712-80207731 | None:intergenic | 40.0% |
| !! | CGATTTTAGGGACAAATCTG+GGG | + | chr3.4:80207711-80207730 | None:intergenic | 40.0% |
| !! | GGACTGGATTTGTTGGAATT+TGG | + | chr3.4:80208679-80208698 | None:intergenic | 40.0% |
| !! | TGGACCAAATTTGTTGGACT+TGG | + | chr3.4:80208503-80208522 | None:intergenic | 40.0% |
| !!! | TAAACGTGCATTTTGGTTGG+AGG | - | chr3.4:80211091-80211110 | MS.gene067040:intron | 40.0% |
| AAAGGGTAACAGGTCACCTA+TGG | + | chr3.4:80210316-80210335 | None:intergenic | 45.0% | |
| AACCAAACCAAATGGCCACA+TGG | + | chr3.4:80209537-80209556 | None:intergenic | 45.0% | |
| AATATGGATGATCTTCGGCC+TGG | - | chr3.4:80211549-80211568 | MS.gene067040:CDS | 45.0% | |
| ACGGTGCACAAAATACGGTT+TGG | + | chr3.4:80211340-80211359 | None:intergenic | 45.0% | |
| AGGAACAGCAAAAGGGTAAC+AGG | + | chr3.4:80210326-80210345 | None:intergenic | 45.0% | |
| ATTGACCGTGACATGCCTAT+TGG | - | chr3.4:80211137-80211156 | MS.gene067040:CDS | 45.0% | |
| ATTGAGCCCAACCTTCATCA+AGG | + | chr3.4:80211178-80211197 | None:intergenic | 45.0% | |
| ATTGCCTCCTTTATGGCTTC+CGG | + | chr3.4:80211047-80211066 | None:intergenic | 45.0% | |
| CAATTTGAAGGTTCTCAGGG+GGG | - | chr3.4:80209186-80209205 | MS.gene067040:intron | 45.0% | |
| CATGACTCAGAACAGCAACT+AGG | + | chr3.4:80209268-80209287 | None:intergenic | 45.0% | |
| CCAACAAATCCAGTCCCAAA+AGG | - | chr3.4:80208683-80208702 | MS.gene067040:intron | 45.0% | |
| CTCTTCACCTTGATGAAGGT+TGG | - | chr3.4:80211168-80211187 | MS.gene067040:CDS | 45.0% | |
| CTTCAGTATGCACAGGGATA+TGG | + | chr3.4:80211434-80211453 | None:intergenic | 45.0% | |
| GAAGTCATTCAGCTCATGTC+TGG | - | chr3.4:80210487-80210506 | MS.gene067040:intron | 45.0% | |
| GACCAGTATTCAACTTGGCT+AGG | + | chr3.4:80209636-80209655 | None:intergenic | 45.0% | |
| GCAATTTGAAGGTTCTCAGG+GGG | - | chr3.4:80209185-80209204 | MS.gene067040:intron | 45.0% | |
| GCCGTACTAGTGTAATCTGT+AGG | - | chr3.4:80210437-80210456 | MS.gene067040:intron | 45.0% | |
| GCTATAGCACTATTGCACAG+AGG | - | chr3.4:80208873-80208892 | MS.gene067040:intron | 45.0% | |
| GGACCCATTAAGGACTAATG+TGG | - | chr3.4:80208156-80208175 | MS.gene067040:intron | 45.0% | |
| GGAGTTTCTCTCCAATTCCA+AGG | + | chr3.4:80210837-80210856 | None:intergenic | 45.0% | |
| GGGAAGGGGGTTGTATTTAA+AGG | - | chr3.4:80210610-80210629 | MS.gene067040:intron | 45.0% | |
| GTACAATGCATGTCCAGTGA+TGG | - | chr3.4:80208330-80208349 | MS.gene067040:intron | 45.0% | |
| GTATTAGGTTAGTGAGTCGC+TGG | + | chr3.4:80209613-80209632 | None:intergenic | 45.0% | |
| GTGCGTCTAGAAAATGAGAC+AGG | + | chr3.4:80210267-80210286 | None:intergenic | 45.0% | |
| GTTTCTCTCCAATTCCAAGG+AGG | + | chr3.4:80210834-80210853 | None:intergenic | 45.0% | |
| TAGCCGAGATTGGACCTAAT+AGG | - | chr3.4:80210015-80210034 | MS.gene067040:intron | 45.0% | |
| TATGGTTGAACCAATCGGAC+CGG | - | chr3.4:80210236-80210255 | MS.gene067040:intron | 45.0% | |
| TGGAATTGGAGAGAAACTCC+CGG | - | chr3.4:80210837-80210856 | MS.gene067040:intron | 45.0% | |
| TGTGCAAGTGCTATCAACTG+CGG | + | chr3.4:80208084-80208103 | None:intergenic | 45.0% | |
| TTCCATGTGGCCATTTGGTT+TGG | - | chr3.4:80209532-80209551 | MS.gene067040:intron | 45.0% | |
| TTGCAGAGTGTGGAGAATAG+CGG | + | chr3.4:80208911-80208930 | None:intergenic | 45.0% | |
| TTGTAGAAATCGATTGGGCG+AGG | + | chr3.4:80206912-80206931 | None:intergenic | 45.0% | |
| ! | AAAGCGAAGCATCATGATCG+AGG | - | chr3.4:80207299-80207318 | MS.gene067040:CDS | 45.0% |
| ! | AAAGTCAGTCTTGCTGTGGA+AGG | - | chr3.4:80210967-80210986 | MS.gene067040:intron | 45.0% |
| ! | AAGTCAGTCTTGCTGTGGAA+GGG | - | chr3.4:80210968-80210987 | MS.gene067040:intron | 45.0% |
| ! | ACCCTAGCCAAGTTGAATAC+TGG | - | chr3.4:80209631-80209650 | MS.gene067040:intron | 45.0% |
| ! | AGCATATGGTGGAACAATGG+TGG | + | chr3.4:80208814-80208833 | None:intergenic | 45.0% |
| ! | CTATCAACCTTTTGCGTAGC+AGG | - | chr3.4:80207941-80207960 | MS.gene067040:intron | 45.0% |
| ! | GAGTTGGCCTGTATAGCTTT+AGG | - | chr3.4:80209017-80209036 | MS.gene067040:intron | 45.0% |
| ! | GTTGATTCCATGTGGCCATT+TGG | - | chr3.4:80209527-80209546 | MS.gene067040:intron | 45.0% |
| ! | GTTGTTGTTGTTGAAGGTGG+TGG | + | chr3.4:80207016-80207035 | None:intergenic | 45.0% |
| !! | GATAGGTATTGATGGCACTC+CGG | - | chr3.4:80211025-80211044 | MS.gene067040:intron | 45.0% |
| !! | TTGCTGTAGTGGACCCATTA+AGG | - | chr3.4:80208146-80208165 | MS.gene067040:intron | 45.0% |
| !!! | ACTTGTCTGCCACCGATTTT+AGG | + | chr3.4:80207724-80207743 | None:intergenic | 45.0% |
| !!! | CCTTTTGGGACTGGATTTGT+TGG | + | chr3.4:80208686-80208705 | None:intergenic | 45.0% |
| !!! | CTTGTCTGCCACCGATTTTA+GGG | + | chr3.4:80207723-80207742 | None:intergenic | 45.0% |
| !!! | TGCATTTTGGTTGGAGGATG+AGG | - | chr3.4:80211097-80211116 | MS.gene067040:CDS | 45.0% |
| !!! | AAAGTATATATATATTTTTT+AGG | - | chr3.4:80209946-80209965 | MS.gene067040:intron | 5.0% |
| !!! | AAGTATATATATATTTTTTA+GGG | - | chr3.4:80209947-80209966 | MS.gene067040:intron | 5.0% |
| AAAGAAACGCGCGGAAACCT+GGG | - | chr3.4:80207097-80207116 | MS.gene067040:intron | 50.0% | |
| AAGCATCATGATCGAGGTGG+TGG | - | chr3.4:80207305-80207324 | MS.gene067040:CDS | 50.0% | |
| AGTGGAATTTGAACAGGCCG+CGG | - | chr3.4:80208047-80208066 | MS.gene067040:intron | 50.0% | |
| CAAAGCTCCAAAGAAACGCG+CGG | - | chr3.4:80207088-80207107 | MS.gene067040:intron | 50.0% | |
| GAAAATGAGACAGGACCAGC+CGG | + | chr3.4:80210258-80210277 | None:intergenic | 50.0% | |
| GGCCCTAATTGCCTCCTTTA+TGG | + | chr3.4:80211054-80211073 | None:intergenic | 50.0% | |
| GGTCACACTAGTTGCTGTAG+TGG | - | chr3.4:80208135-80208154 | MS.gene067040:intron | 50.0% | |
| GTGCTATCAACTGCGGATCA+CGG | + | chr3.4:80208077-80208096 | None:intergenic | 50.0% | |
| TCAACCATAAACCGGACCGA+AGG | + | chr3.4:80210225-80210244 | None:intergenic | 50.0% | |
| TCAACTCACGCCTCGGTATA+TGG | + | chr3.4:80211577-80211596 | None:intergenic | 50.0% | |
| TCATTCAGCTCATGTCTGGC+TGG | - | chr3.4:80210491-80210510 | MS.gene067040:intron | 50.0% | |
| TCGGCGGTGAGAATCATTTG+CGG | + | chr3.4:80207038-80207057 | None:intergenic | 50.0% | |
| TGGAGAGAAACTCCCGGAAA+TGG | - | chr3.4:80210843-80210862 | MS.gene067040:intron | 50.0% | |
| TGGTGGTTGAAGATCGGTGT+TGG | + | chr3.4:80206970-80206989 | None:intergenic | 50.0% | |
| ! | AGAAGCACGCGACATGATGA+TGG | - | chr3.4:80206935-80206954 | MS.gene067040:CDS | 50.0% |
| ! | GCGGTTGTTGTTGTTGAAGG+TGG | + | chr3.4:80207019-80207038 | None:intergenic | 50.0% |
| ! | GGAGCTTTGATCTCCATCTC+AGG | + | chr3.4:80207077-80207096 | None:intergenic | 50.0% |
| ! | GTCCCAAAAGGTGTGCATCT+TGG | - | chr3.4:80208695-80208714 | MS.gene067040:intron | 50.0% |
| ! | GTTGTTGTTGAAGGTGGTGG+TGG | + | chr3.4:80207013-80207032 | None:intergenic | 50.0% |
| ! | TATACCGAGGCGTGAGTTGA+TGG | - | chr3.4:80211577-80211596 | MS.gene067040:CDS | 50.0% |
| !! | ACCGTGATTTTCTGGCACGT+CGG | - | chr3.4:80211481-80211500 | MS.gene067040:CDS | 50.0% |
| !!! | AGATGCACACCTTTTGGGAC+TGG | + | chr3.4:80208695-80208714 | None:intergenic | 50.0% |
| !!! | AGGCAATTAGGGCCGCTTTT+AGG | - | chr3.4:80211060-80211079 | MS.gene067040:intron | 50.0% |
| ACAGGCTATCGTGTTCCCTC+CGG | + | chr3.4:80207797-80207816 | None:intergenic | 55.0% | |
| AGGTTGACCACACAGGCCTT+CGG | - | chr3.4:80210206-80210225 | MS.gene067040:intron | 55.0% | |
| CAAAGAAACGCGCGGAAACC+TGG | - | chr3.4:80207096-80207115 | MS.gene067040:intron | 55.0% | |
| CACTCCGGAAGCCATAAAGG+AGG | - | chr3.4:80211040-80211059 | MS.gene067040:intron | 55.0% | |
| CAGGTTTCCGCGCGTTTCTT+TGG | + | chr3.4:80207098-80207117 | None:intergenic | 55.0% | |
| CCCGACGTGCCAGAAAATCA+CGG | + | chr3.4:80211485-80211504 | None:intergenic | 55.0% | |
| GACGAGACACGAAGCCTCAT+TGG | - | chr3.4:80207125-80207144 | MS.gene067040:intron | 55.0% | |
| GACTTGTGGCACAGATGCAC+AGG | - | chr3.4:80208416-80208435 | MS.gene067040:intron | 55.0% | |
| GCAGCAGATGTTGCAGCAAG+CGG | - | chr3.4:80210804-80210823 | MS.gene067040:intron | 55.0% | |
| GGGGAAAGTCAGTCTTGCTG+TGG | - | chr3.4:80210963-80210982 | MS.gene067040:intron | 55.0% | |
| TCGTGTCTCGTCTTGAACCC+AGG | + | chr3.4:80207117-80207136 | None:intergenic | 55.0% | |
| TCTCGCGTCGTAGACCAATG+AGG | + | chr3.4:80207142-80207161 | None:intergenic | 55.0% | |
| TGCAACATCTGCTGCGGCAA+TGG | + | chr3.4:80210799-80210818 | None:intergenic | 55.0% | |
| TGGCACTCCGGAAGCCATAA+AGG | - | chr3.4:80211037-80211056 | MS.gene067040:intron | 55.0% | |
| ! | CATTGGTCTACGACGCGAGA+TGG | - | chr3.4:80207142-80207161 | MS.gene067040:intron | 55.0% |
| ! | GCGAAGCATCATGATCGAGG+TGG | - | chr3.4:80207302-80207321 | MS.gene067040:CDS | 55.0% |
| ! | GCTTGCTGCAACATCTGCTG+CGG | + | chr3.4:80210805-80210824 | None:intergenic | 55.0% |
| !! | ATTTTCTGGCACGTCGGGCT+TGG | - | chr3.4:80211487-80211506 | MS.gene067040:CDS | 55.0% |
| !! | CATGATCGAGGTGGTGGAAG+TGG | - | chr3.4:80207311-80207330 | MS.gene067040:CDS | 55.0% |
| !! | CCGTGATTTTCTGGCACGTC+GGG | - | chr3.4:80211482-80211501 | MS.gene067040:CDS | 55.0% |
| !! | CGGTGGTGGTGGTTGAAGAT+CGG | + | chr3.4:80206976-80206995 | None:intergenic | 55.0% |
| !! | GTGGTGGAAGTGGTTCTGGT+GGG | - | chr3.4:80207321-80207340 | MS.gene067040:CDS | 55.0% |
| !! | TGAAGGTGGTGGTGGTGTTG+CGG | + | chr3.4:80207005-80207024 | None:intergenic | 55.0% |
| ACGCCTCGGTATATGGCACC+AGG | + | chr3.4:80211570-80211589 | None:intergenic | 60.0% | |
| ATTCTCACCGCCGAGAGCAG+CGG | - | chr3.4:80207044-80207063 | MS.gene067040:CDS | 60.0% | |
| CAGGCCTTCGGTCCGGTTTA+TGG | - | chr3.4:80210218-80210237 | MS.gene067040:intron | 60.0% | |
| CTGCGGATCACGGAAAACCG+CGG | + | chr3.4:80208067-80208086 | None:intergenic | 60.0% | |
| GCGGAGTCCCTCCTTGGAAT+TGG | - | chr3.4:80210823-80210842 | MS.gene067040:intron | 60.0% | |
| GTTGAACCAATCGGACCGGC+TGG | - | chr3.4:80210240-80210259 | MS.gene067040:intron | 60.0% | |
| TCTGCTGCGGCAATGGCAAG+AGG | + | chr3.4:80210792-80210811 | None:intergenic | 60.0% | |
| !! | CGAGGTGGTGGAAGTGGTTC+TGG | - | chr3.4:80207317-80207336 | MS.gene067040:CDS | 60.0% |
| !! | GGTGGTGGAAGTGGTTCTGG+TGG | - | chr3.4:80207320-80207339 | MS.gene067040:CDS | 60.0% |
| AACCGGACCGAAGGCCTGTG+TGG | + | chr3.4:80210216-80210235 | None:intergenic | 65.0% | |
| ACAGGACCAGCCGGTCCGAT+TGG | + | chr3.4:80210249-80210268 | None:intergenic | 65.0% | |
| AGGATCGTCGCCGCTGCTCT+CGG | + | chr3.4:80207057-80207076 | None:intergenic | 65.0% | |
| CAGCAAGCGGAGTCCCTCCT+TGG | - | chr3.4:80210817-80210836 | MS.gene067040:intron | 65.0% | |
| CAGCGGCGACGATCCTGAGA+TGG | - | chr3.4:80207061-80207080 | MS.gene067040:CDS | 65.0% | |
| GACCACACAGGCCTTCGGTC+CGG | - | chr3.4:80210211-80210230 | MS.gene067040:intron | 65.0% | |
| !! | AGGTGGTGGTGGTGTTGCGG+CGG | + | chr3.4:80207002-80207021 | None:intergenic | 65.0% |
| !! | CGGCCTGGTGCCATATACCG+AGG | - | chr3.4:80211564-80211583 | MS.gene067040:CDS | 65.0% |
| ATCGTCGCCGCTGCTCTCGG+CGG | + | chr3.4:80207054-80207073 | None:intergenic | 70.0% | |
| CTGGCACGTCGGGCTTGGAC+AGG | - | chr3.4:80211492-80211511 | MS.gene067040:CDS | 70.0% | |
| !! | TGGTGGTGGTGTTGCGGCGG+TGG | + | chr3.4:80206999-80207018 | None:intergenic | 70.0% |
| !! | TGGTGGTGTTGCGGCGGTGG+CGG | + | chr3.4:80206996-80207015 | None:intergenic | 70.0% |
| ! | TGTTGCGGCGGTGGCGGTGG+TGG | + | chr3.4:80206990-80207009 | None:intergenic | 75.0% |
| !! | TGGTGTTGCGGCGGTGGCGG+TGG | + | chr3.4:80206993-80207012 | None:intergenic | 75.0% |
| !! | TGCGGCGGTGGCGGTGGTGG+TGG | + | chr3.4:80206987-80207006 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 80206888 | 80211596 | 80206888 | ID=MS.gene067040 |
| chr3.4 | mRNA | 80206888 | 80211596 | 80206888 | ID=MS.gene067040.t1;Parent=MS.gene067040 |
| chr3.4 | exon | 80211095 | 80211596 | 80211095 | ID=MS.gene067040.t1.exon1;Parent=MS.gene067040.t1 |
| chr3.4 | CDS | 80211095 | 80211596 | 80211095 | ID=cds.MS.gene067040.t1;Parent=MS.gene067040.t1 |
| chr3.4 | exon | 80209077 | 80209115 | 80209077 | ID=MS.gene067040.t1.exon2;Parent=MS.gene067040.t1 |
| chr3.4 | CDS | 80209077 | 80209115 | 80209077 | ID=cds.MS.gene067040.t1;Parent=MS.gene067040.t1 |
| chr3.4 | exon | 80207620 | 80207748 | 80207620 | ID=MS.gene067040.t1.exon3;Parent=MS.gene067040.t1 |
| chr3.4 | CDS | 80207620 | 80207748 | 80207620 | ID=cds.MS.gene067040.t1;Parent=MS.gene067040.t1 |
| chr3.4 | exon | 80207299 | 80207523 | 80207299 | ID=MS.gene067040.t1.exon4;Parent=MS.gene067040.t1 |
| chr3.4 | CDS | 80207299 | 80207523 | 80207299 | ID=cds.MS.gene067040.t1;Parent=MS.gene067040.t1 |
| chr3.4 | exon | 80206888 | 80207090 | 80206888 | ID=MS.gene067040.t1.exon5;Parent=MS.gene067040.t1 |
| chr3.4 | CDS | 80206888 | 80207090 | 80206888 | ID=cds.MS.gene067040.t1;Parent=MS.gene067040.t1 |
| Gene Sequence |
| Protein sequence |
