Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79125.t1 | XP_024635745.1 | 99.2 | 365 | 3 | 0 | 1 | 365 | 1 | 365 | 5.00E-187 | 663.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79125.t1 | Q9FX53 | 69.5 | 334 | 63 | 5 | 66 | 364 | 76 | 405 | 4.8e-130 | 465.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79125.t1 | G7J2H9 | 92.8 | 390 | 3 | 1 | 1 | 365 | 1 | 390 | 5.3e-183 | 649.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene79125.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75566 | MS.gene79125 | PPI |
| MS.gene79125 | MS.gene045226 | PPI |
| MS.gene79125 | MS.gene067040 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79125.t1 | MTR_3g085960 | 93.077 | 390 | 2 | 1 | 1 | 365 | 1 | 390 | 0.0 | 745 |
| MS.gene79125.t1 | MTR_5g026540 | 36.364 | 121 | 69 | 3 | 50 | 168 | 19 | 133 | 1.92e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79125.t1 | AT1G13450 | 63.971 | 408 | 93 | 8 | 5 | 364 | 4 | 405 | 3.02e-173 | 488 |
| MS.gene79125.t1 | AT3G25990 | 63.003 | 373 | 92 | 3 | 21 | 364 | 16 | 371 | 1.50e-167 | 473 |
| MS.gene79125.t1 | AT1G13450 | 59.420 | 276 | 60 | 7 | 1 | 230 | 1 | 270 | 9.23e-94 | 281 |
| MS.gene79125.t1 | AT1G13450 | 59.420 | 276 | 60 | 7 | 1 | 230 | 1 | 270 | 9.23e-94 | 281 |
| MS.gene79125.t1 | AT1G13450 | 56.757 | 222 | 47 | 5 | 5 | 182 | 4 | 220 | 3.03e-65 | 207 |
| MS.gene79125.t1 | AT2G38250 | 43.878 | 98 | 43 | 2 | 40 | 137 | 17 | 102 | 1.63e-15 | 76.6 |
| MS.gene79125.t1 | AT5G01380 | 45.902 | 61 | 33 | 0 | 77 | 137 | 52 | 112 | 1.25e-11 | 65.5 |
Find 108 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCTAATTGCCTCCTTTA+TGG | 0.202289 | 3.1:+68707419 | None:intergenic |
| CAGGTTTCCGCGCGTTTCTT+TGG | 0.225470 | 3.1:+68711372 | None:intergenic |
| AAGCCATAAAGGAGGCAATT+AGG | 0.234916 | 3.1:-68707422 | MS.gene79125:CDS |
| GATGATGCCAACATTTCTTT+TGG | 0.253442 | 3.1:-68709094 | MS.gene79125:CDS |
| CGAAGTCGAATAAGCATCTT+TGG | 0.254316 | 3.1:-68711284 | MS.gene79125:CDS |
| CGACTATGTGTACTGATAAA+TGG | 0.279079 | 3.1:-68711215 | MS.gene79125:CDS |
| TCAACTCACGCCTCGGTATA+TGG | 0.284610 | 3.1:+68706896 | None:intergenic |
| CGAGGTGGTGGAAGTGGTTC+TGG | 0.294738 | 3.1:-68711150 | MS.gene79125:CDS |
| ATAGCATAGCTTACCATTTC+CGG | 0.308477 | 3.1:+68707614 | None:intergenic |
| TAAGAGAATTTGATGGTTAT+AGG | 0.317322 | 3.1:-68706953 | MS.gene79125:CDS |
| TGAGAACTAAACGTGCATTT+TGG | 0.331340 | 3.1:-68707386 | MS.gene79125:CDS |
| ATTGCCTCCTTTATGGCTTC+CGG | 0.339890 | 3.1:+68707426 | None:intergenic |
| TTATAGGAATATTGACAATA+TGG | 0.365204 | 3.1:-68706937 | MS.gene79125:CDS |
| CAAAGAAACGCGCGGAAACC+TGG | 0.365216 | 3.1:-68711371 | MS.gene79125:CDS |
| CTTCAGTATGCACAGGGATA+TGG | 0.367649 | 3.1:+68707039 | None:intergenic |
| ACTCAATCTTGAGAGAAGTT+TGG | 0.367954 | 3.1:-68707718 | MS.gene79125:CDS |
| GCGGAGTCCCTCCTTGGAAT+TGG | 0.368477 | 3.1:-68707647 | MS.gene79125:CDS |
| CTGGCACGTCGGGCTTGGAC+AGG | 0.391303 | 3.1:-68706978 | MS.gene79125:CDS |
| TGGTGGTGGTGTTGCGGCGG+TGG | 0.393366 | 3.1:+68711471 | None:intergenic |
| TGTTGCGGCGGTGGCGGTGG+TGG | 0.396652 | 3.1:+68711480 | None:intergenic |
| TAGCATAGCTTACCATTTCC+GGG | 0.400255 | 3.1:+68707615 | None:intergenic |
| TGCAACATCTGCTGCGGCAA+TGG | 0.406749 | 3.1:+68707674 | None:intergenic |
| AGCCATAAAGGAGGCAATTA+GGG | 0.407648 | 3.1:-68707421 | MS.gene79125:CDS |
| ATTGACCGTGACATGCCTAT+TGG | 0.408632 | 3.1:-68707333 | MS.gene79125:CDS |
| TGGTGTTGCGGCGGTGGCGG+TGG | 0.409366 | 3.1:+68711477 | None:intergenic |
| GAAGGGTTATATCAGTCAAA+TGG | 0.412587 | 3.1:-68707485 | MS.gene79125:CDS |
| TTCAGCGAAGATGAGAGAAA+AGG | 0.415899 | 3.1:-68711253 | MS.gene79125:CDS |
| GTCATATAGGCATACTTTGA+TGG | 0.420087 | 3.1:+68707070 | None:intergenic |
| TGGTGGTGTTGCGGCGGTGG+CGG | 0.425610 | 3.1:+68711474 | None:intergenic |
| TCTTCTTTGTAGAAATCGAT+TGG | 0.427495 | 3.1:+68711552 | None:intergenic |
| TGCGGCGGTGGCGGTGGTGG+TGG | 0.431040 | 3.1:+68711483 | None:intergenic |
| GACGAGACACGAAGCCTCAT+TGG | 0.438362 | 3.1:-68711342 | MS.gene79125:CDS |
| GGAGCTTTGATCTCCATCTC+AGG | 0.439885 | 3.1:+68711393 | None:intergenic |
| TCGTGTCTCGTCTTGAACCC+AGG | 0.453965 | 3.1:+68711353 | None:intergenic |
| GTTGTTGTTGAAGGTGGTGG+TGG | 0.455795 | 3.1:+68711457 | None:intergenic |
| TTTGCGGTTGTTGTTGTTGA+AGG | 0.456172 | 3.1:+68711448 | None:intergenic |
| TGGAGAGAAACTCCCGGAAA+TGG | 0.457751 | 3.1:-68707627 | MS.gene79125:intron |
| TGGCACTCCGGAAGCCATAA+AGG | 0.457915 | 3.1:-68707433 | MS.gene79125:CDS |
| AAGGGTTATATCAGTCAAAT+GGG | 0.461970 | 3.1:-68707484 | MS.gene79125:CDS |
| TGAAGAGTGTAATTTCCAAT+AGG | 0.462773 | 3.1:+68707318 | None:intergenic |
| TATGGTCAGACTCGTCATAT+AGG | 0.466782 | 3.1:+68707057 | None:intergenic |
| TCAGCGAAGATGAGAGAAAA+GGG | 0.467180 | 3.1:-68711252 | MS.gene79125:CDS |
| TACACTCTTCACCTTGATGA+AGG | 0.469365 | 3.1:-68707306 | MS.gene79125:intron |
| ATCTTCTCTTCAGTATGCAC+AGG | 0.472173 | 3.1:+68707032 | None:intergenic |
| CATGATCGAGGTGGTGGAAG+TGG | 0.472652 | 3.1:-68711156 | MS.gene79125:CDS |
| CAGCAAGCGGAGTCCCTCCT+TGG | 0.479134 | 3.1:-68707653 | MS.gene79125:CDS |
| CGGTGGTGGTGGTTGAAGAT+CGG | 0.482702 | 3.1:+68711494 | None:intergenic |
| CTTCTTTGTAGAAATCGATT+GGG | 0.484762 | 3.1:+68711553 | None:intergenic |
| TTCAAAGACATACCTTCAAC+GGG | 0.487539 | 3.1:+68709070 | None:intergenic |
| ACAGGTCTAAGAGAATTTGA+TGG | 0.489101 | 3.1:-68706960 | MS.gene79125:CDS |
| GTTGTTGTTGTTGAAGGTGG+TGG | 0.490511 | 3.1:+68711454 | None:intergenic |
| TATACCGAGGCGTGAGTTGA+GGG | 0.493005 | 3.1:-68706893 | None:intergenic |
| CATTGGTCTACGACGCGAGA+TGG | 0.494860 | 3.1:-68711325 | MS.gene79125:CDS |
| AGAAGCACGCGACATGATGA+TGG | 0.494994 | 3.1:-68711532 | MS.gene79125:CDS |
| ACAAGACGGATAGGTATTGA+TGG | 0.498257 | 3.1:-68707453 | MS.gene79125:CDS |
| AGGATCGTCGCCGCTGCTCT+CGG | 0.501790 | 3.1:+68711413 | None:intergenic |
| AAGCATCATGATCGAGGTGG+TGG | 0.503110 | 3.1:-68711162 | MS.gene79125:CDS |
| TTGACAATATGGATGATCTT+CGG | 0.509969 | 3.1:-68706926 | MS.gene79125:CDS |
| GCGGTTGTTGTTGTTGAAGG+TGG | 0.510579 | 3.1:+68711451 | None:intergenic |
| GCAGCAGATGTTGCAGCAAG+CGG | 0.510852 | 3.1:-68707666 | MS.gene79125:CDS |
| GAAGTCGAATAAGCATCTTT+GGG | 0.511026 | 3.1:-68711283 | MS.gene79125:CDS |
| GAGAGAAGTTTGGATCATGA+TGG | 0.523270 | 3.1:-68707708 | MS.gene79125:CDS |
| CCTGCCCTCAACTCACGCCT+CGG | 0.526894 | 3.1:+68706889 | None:intergenic |
| CTTCAAAGACATACCTTCAA+CGG | 0.531616 | 3.1:+68709069 | None:intergenic |
| AAAGTCAGTCTTGCTGTGGA+AGG | 0.533418 | 3.1:-68707503 | MS.gene79125:CDS |
| ATATACCGAGGCGTGAGTTG+AGG | 0.537639 | 3.1:-68706894 | None:intergenic |
| AACGGGTCCAAAAGAAATGT+TGG | 0.546852 | 3.1:+68709087 | None:intergenic |
| AGAGAAGTTTGGATCATGAT+GGG | 0.549925 | 3.1:-68707707 | MS.gene79125:CDS |
| AAAGAAACGCGCGGAAACCT+GGG | 0.551251 | 3.1:-68711370 | MS.gene79125:CDS |
| TGAAGGTGGTGGTGGTGTTG+CGG | 0.562582 | 3.1:+68711465 | None:intergenic |
| GGTGGTGGAAGTGGTTCTGG+TGG | 0.566673 | 3.1:-68711147 | MS.gene79125:CDS |
| CTTCTCTCAAGATTGAGTGT+TGG | 0.567585 | 3.1:+68707723 | None:intergenic |
| TTGTAGAAATCGATTGGGCG+AGG | 0.569863 | 3.1:+68711558 | None:intergenic |
| GGAGTTTCTCTCCAATTCCA+AGG | 0.571736 | 3.1:+68707636 | None:intergenic |
| AGGTGGTGGTGGTGTTGCGG+CGG | 0.579610 | 3.1:+68711468 | None:intergenic |
| AAAATCACGGTAATCATCCT+CGG | 0.581502 | 3.1:+68707001 | None:intergenic |
| TCGGCGGTGAGAATCATTTG+CGG | 0.586996 | 3.1:+68711432 | None:intergenic |
| ATTCTCACCGCCGAGAGCAG+CGG | 0.587631 | 3.1:-68711423 | MS.gene79125:CDS |
| TTTCTCTCCAATTCCAAGGA+GGG | 0.589209 | 3.1:+68707640 | None:intergenic |
| CAGCGGCGACGATCCTGAGA+TGG | 0.596039 | 3.1:-68711406 | MS.gene79125:CDS |
| AATATGGATGATCTTCGGCC+TGG | 0.596618 | 3.1:-68706921 | MS.gene79125:CDS |
| GGTGATTATACAAGACGGAT+AGG | 0.598109 | 3.1:-68707462 | MS.gene79125:CDS |
| TGGAATTGGAGAGAAACTCC+CGG | 0.599496 | 3.1:-68707633 | MS.gene79125:CDS |
| AAGTCAGTCTTGCTGTGGAA+GGG | 0.603947 | 3.1:-68707502 | MS.gene79125:CDS |
| ACTGAGCCCAACCTTCATCA+AGG | 0.605750 | 3.1:+68707295 | None:intergenic |
| GGGGAAAGTCAGTCTTGCTG+TGG | 0.620628 | 3.1:-68707507 | MS.gene79125:CDS |
| GATAGGTATTGATGGCACTC+CGG | 0.620845 | 3.1:-68707445 | MS.gene79125:CDS |
| CATTTATCAGTACACATAGT+CGG | 0.622025 | 3.1:+68711216 | None:intergenic |
| GTGGTGGAAGTGGTTCTGGT+GGG | 0.625269 | 3.1:-68711146 | MS.gene79125:CDS |
| TTTAGTTCTCAACCTAAAAG+CGG | 0.625441 | 3.1:+68707398 | None:intergenic |
| TCTGCTGCGGCAATGGCAAG+AGG | 0.628811 | 3.1:+68707681 | None:intergenic |
| ACGCCTCGGTATATGGCACC+AGG | 0.628824 | 3.1:+68706903 | None:intergenic |
| GCTTGCTGCAACATCTGCTG+CGG | 0.629023 | 3.1:+68707668 | None:intergenic |
| TGGTGGTTGAAGATCGGTGT+TGG | 0.640907 | 3.1:+68711500 | None:intergenic |
| CTATGTGTACTGATAAATGG+AGG | 0.647821 | 3.1:-68711212 | MS.gene79125:CDS |
| CCCGACGTGCCAGAAAATCA+CGG | 0.651686 | 3.1:+68706988 | None:intergenic |
| ATCGTCGCCGCTGCTCTCGG+CGG | 0.657648 | 3.1:+68711416 | None:intergenic |
| CGGCCTGGTGCCATATACCG+AGG | 0.668670 | 3.1:-68706906 | MS.gene79125:CDS |
| AATTTCCAATAGGCATGTCA+CGG | 0.669198 | 3.1:+68707328 | None:intergenic |
| AATGGGGTGATTATACAAGA+CGG | 0.669804 | 3.1:-68707467 | MS.gene79125:CDS |
| AAAGCGAAGCATCATGATCG+AGG | 0.672309 | 3.1:-68711168 | MS.gene79125:CDS |
| TCTTCTCTTCAGTATGCACA+GGG | 0.678271 | 3.1:+68707033 | None:intergenic |
| GTTTCTCTCCAATTCCAAGG+AGG | 0.688298 | 3.1:+68707639 | None:intergenic |
| TCTCGCGTCGTAGACCAATG+AGG | 0.690034 | 3.1:+68711328 | None:intergenic |
| CAAAGCTCCAAAGAAACGCG+CGG | 0.692450 | 3.1:-68711379 | MS.gene79125:CDS |
| CACTCCGGAAGCCATAAAGG+AGG | 0.698747 | 3.1:-68707430 | MS.gene79125:CDS |
| GCGAAGCATCATGATCGAGG+TGG | 0.709157 | 3.1:-68711165 | MS.gene79125:CDS |
| AGGGTTATATCAGTCAAATG+GGG | 0.717478 | 3.1:-68707483 | MS.gene79125:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATAATAAAAGCTTA+AGG | + | chr3.1:68708963-68708982 | None:intergenic | 10.0% |
| !!! | AGTATATATATATTTTTTAG+GGG | - | chr3.1:68709953-68709972 | MS.gene79125:intron | 10.0% |
| !! | AATAATATGTATTCACAAAA+TGG | - | chr3.1:68709842-68709861 | MS.gene79125:intron | 15.0% |
| !! | ATAATATGTATTCACAAAAT+GGG | - | chr3.1:68709843-68709862 | MS.gene79125:intron | 15.0% |
| !! | CATATAACGATAAAAAAAAT+TGG | - | chr3.1:68710368-68710387 | MS.gene79125:intron | 15.0% |
| !! | CTATAATATATTAACCTATT+AGG | + | chr3.1:68710037-68710056 | None:intergenic | 15.0% |
| !! | GAAAAATATGAAATAATCTT+AGG | + | chr3.1:68709483-68709502 | None:intergenic | 15.0% |
| !! | GATAATAATAATAATGTTTG+TGG | - | chr3.1:68707534-68707553 | MS.gene79125:intron | 15.0% |
| !!! | ATTTGAATTTTCATTTCAAT+AGG | + | chr3.1:68710422-68710441 | None:intergenic | 15.0% |
| !!! | CAATTTTTTTTATCGTTATA+TGG | + | chr3.1:68710370-68710389 | None:intergenic | 15.0% |
| !!! | TTATTTTACTTTTAATGTCT+AGG | - | chr3.1:68711238-68711257 | MS.gene79125:CDS | 15.0% |
| !!! | TTTTAATTAAGATAAACTGA+TGG | + | chr3.1:68710576-68710595 | None:intergenic | 15.0% |
| !! | AACAATATATTATCATTTGC+AGG | - | chr3.1:68711377-68711396 | MS.gene79125:CDS | 20.0% |
| !! | AGAACATATATATAACAATC+TGG | - | chr3.1:68710171-68710190 | MS.gene79125:intron | 20.0% |
| !! | ATTACCAATTCACTTAAATT+CGG | + | chr3.1:68709247-68709266 | None:intergenic | 20.0% |
| !! | TAAAGGATTTAGATATATGT+GGG | - | chr3.1:68710632-68710651 | MS.gene79125:intron | 20.0% |
| !! | TACAAAATATCATGAAATAG+CGG | - | chr3.1:68708012-68708031 | MS.gene79125:intron | 20.0% |
| !! | TACAAAATATTGTCAAATAG+CGG | - | chr3.1:68708848-68708867 | MS.gene79125:intron | 20.0% |
| !! | TTAAAGGATTTAGATATATG+TGG | - | chr3.1:68710631-68710650 | MS.gene79125:intron | 20.0% |
| !! | TTATAGGAATATTGACAATA+TGG | - | chr3.1:68711538-68711557 | MS.gene79125:CDS | 20.0% |
| !!! | ATAGTTAGGTTTTTAATAGT+CGG | + | chr3.1:68708632-68708651 | None:intergenic | 20.0% |
| !!! | ATTTTGTACTAAATAGCATA+TGG | + | chr3.1:68708836-68708855 | None:intergenic | 20.0% |
| !!! | GTTTAAAACTTTTATAACTC+CGG | - | chr3.1:68708362-68708381 | MS.gene79125:intron | 20.0% |
| !!! | TCATTTTTTTCTTCTTCTTT+AGG | - | chr3.1:68710897-68710916 | MS.gene79125:intron | 20.0% |
| !!! | TGGATAATTGTTTATGTTTT+TGG | - | chr3.1:68707580-68707599 | MS.gene79125:intron | 20.0% |
| !!! | TTTAAAACTTTTATAACTCC+GGG | - | chr3.1:68708363-68708382 | MS.gene79125:intron | 20.0% |
| !!! | TTTTTCTTTACTCCAAATTT+CGG | + | chr3.1:68709000-68709019 | None:intergenic | 20.0% |
| ! | ACATTATGGCTTGAAATATT+AGG | - | chr3.1:68708562-68708581 | MS.gene79125:intron | 25.0% |
| ! | ATGGAATGTTTACAAGAAAA+AGG | + | chr3.1:68710351-68710370 | None:intergenic | 25.0% |
| ! | CAGTTACAAAAAGAATAGTT+AGG | + | chr3.1:68708646-68708665 | None:intergenic | 25.0% |
| ! | CTTAAACGATAATAATACTG+CGG | - | chr3.1:68707926-68707945 | MS.gene79125:intron | 25.0% |
| ! | TATAAATCACTGCAATTTGA+AGG | - | chr3.1:68709181-68709200 | MS.gene79125:intron | 25.0% |
| ! | TATATTATCATTTGCAGGAA+TGG | - | chr3.1:68711382-68711401 | MS.gene79125:CDS | 25.0% |
| ! | TCTTACATGCAATTTGATAA+AGG | - | chr3.1:68707451-68707470 | MS.gene79125:CDS | 25.0% |
| ! | TTGTACTAAATACTCTATTG+TGG | + | chr3.1:68707997-68708016 | None:intergenic | 25.0% |
| ! | TTTGGAAAATGTAGTTGATT+AGG | + | chr3.1:68708669-68708688 | None:intergenic | 25.0% |
| !! | CACATATTGAAATGTTACTT+TGG | - | chr3.1:68710392-68710411 | MS.gene79125:intron | 25.0% |
| !! | TAAGAGAATTTGATGGTTAT+AGG | - | chr3.1:68711522-68711541 | MS.gene79125:CDS | 25.0% |
| !! | TAGTTAGGTTTTTAATAGTC+GGG | + | chr3.1:68708631-68708650 | None:intergenic | 25.0% |
| !! | TTAAAACTTTTATAACTCCG+GGG | - | chr3.1:68708364-68708383 | MS.gene79125:intron | 25.0% |
| !! | TTGTTTAAAGTTCATGTACT+GGG | - | chr3.1:68711271-68711290 | MS.gene79125:CDS | 25.0% |
| !!! | AAGTGAATCTTTTAGAATGT+CGG | - | chr3.1:68708122-68708141 | MS.gene79125:intron | 25.0% |
| !!! | ATTTGATTTGATGCTATGTT+TGG | - | chr3.1:68707560-68707579 | MS.gene79125:intron | 25.0% |
| !!! | GCTATTTTACATGTTTGTAT+CGG | - | chr3.1:68708734-68708753 | MS.gene79125:intron | 25.0% |
| !!! | GGTATCTTTTTCAAACATTA+TGG | - | chr3.1:68708548-68708567 | MS.gene79125:intron | 25.0% |
| !!! | TTCTTTTGTAAAAAGTGCAT+CGG | + | chr3.1:68707869-68707888 | None:intergenic | 25.0% |
| AAAATTCCACTACGTTATAG+TGG | + | chr3.1:68708792-68708811 | None:intergenic | 30.0% | |
| AACTGTTCCTAAAGACAAAA+TGG | + | chr3.1:68709330-68709349 | None:intergenic | 30.0% | |
| AAGAAAAAGGAACAGCAAAA+GGG | + | chr3.1:68710338-68710357 | None:intergenic | 30.0% | |
| AAGGGTTATATCAGTCAAAT+GGG | - | chr3.1:68710991-68711010 | MS.gene79125:intron | 30.0% | |
| AATGTCCAGTAGTAGTATTT+AGG | - | chr3.1:68710594-68710613 | MS.gene79125:intron | 30.0% | |
| ACAAATTTGGTCCAAAAAGA+AGG | - | chr3.1:68708517-68708536 | MS.gene79125:intron | 30.0% | |
| ACTGTTCCTAAAGACAAAAT+GGG | + | chr3.1:68709329-68709348 | None:intergenic | 30.0% | |
| ACTTCATAATACAAGAAGCA+CGG | + | chr3.1:68708588-68708607 | None:intergenic | 30.0% | |
| ATGTCCAGTAGTAGTATTTA+GGG | - | chr3.1:68710595-68710614 | MS.gene79125:intron | 30.0% | |
| CAAACCGAATTTAAGTGAAT+TGG | - | chr3.1:68709240-68709259 | MS.gene79125:intron | 30.0% | |
| CAAATTTGGTCCAAAAAGAA+GGG | - | chr3.1:68708518-68708537 | MS.gene79125:intron | 30.0% | |
| CACTATAATTCGAAACAAAC+AGG | + | chr3.1:68707823-68707842 | None:intergenic | 30.0% | |
| CATTTATCAGTACACATAGT+CGG | + | chr3.1:68707262-68707281 | None:intergenic | 30.0% | |
| CTGTTTGTTTCGAATTATAG+TGG | - | chr3.1:68707821-68707840 | MS.gene79125:intron | 30.0% | |
| CTTCTTTGTAGAAATCGATT+GGG | + | chr3.1:68706925-68706944 | None:intergenic | 30.0% | |
| GACCTGATATCAATTGATAT+GGG | + | chr3.1:68709112-68709131 | None:intergenic | 30.0% | |
| GCTATATCATAATTGCATAG+TGG | - | chr3.1:68708037-68708056 | MS.gene79125:intron | 30.0% | |
| TATGTTCATTAACAATGCAC+TGG | - | chr3.1:68710143-68710162 | MS.gene79125:intron | 30.0% | |
| TATTGTTACGTCAACAGAAA+CGG | + | chr3.1:68711364-68711383 | None:intergenic | 30.0% | |
| TCTCATCATTCTCAAATACT+TGG | - | chr3.1:68710711-68710730 | MS.gene79125:intron | 30.0% | |
| TCTGGTTATTGCAATTTACT+AGG | - | chr3.1:68710470-68710489 | MS.gene79125:intron | 30.0% | |
| TCTTCTTTGTAGAAATCGAT+TGG | + | chr3.1:68706926-68706945 | None:intergenic | 30.0% | |
| TTCTTTGTGAAACCGAAATT+TGG | - | chr3.1:68708985-68709004 | MS.gene79125:intron | 30.0% | |
| TTGACAATATGGATGATCTT+CGG | - | chr3.1:68711549-68711568 | MS.gene79125:CDS | 30.0% | |
| TTGTACTAAATAGCATATGG+TGG | + | chr3.1:68708833-68708852 | None:intergenic | 30.0% | |
| TTTCAGCTCATAAATCATGT+AGG | - | chr3.1:68709499-68709518 | MS.gene79125:intron | 30.0% | |
| ! | AAAGTGATTTGTGAATACTC+TGG | - | chr3.1:68708212-68708231 | MS.gene79125:intron | 30.0% |
| ! | AAGTGATTTGTGAATACTCT+GGG | - | chr3.1:68708213-68708232 | MS.gene79125:intron | 30.0% |
| ! | AAGTGTTGTCAATAACAAGT+TGG | + | chr3.1:68708404-68708423 | None:intergenic | 30.0% |
| ! | ACATGAAGGAACTTTTACTT+TGG | + | chr3.1:68710690-68710709 | None:intergenic | 30.0% |
| ! | AGAGAAGATATTTTATACCG+AGG | - | chr3.1:68711457-68711476 | MS.gene79125:CDS | 30.0% |
| ! | ATTTTCCAATACAGCAATCT+AGG | + | chr3.1:68709570-68709589 | None:intergenic | 30.0% |
| ! | GAAGATTCAACTTTAGAAGT+AGG | + | chr3.1:68707433-68707452 | None:intergenic | 30.0% |
| ! | GTTGTTTAAAGTTCATGTAC+TGG | - | chr3.1:68711270-68711289 | MS.gene79125:CDS | 30.0% |
| ! | TCTTTTTGGACCAAATTTGT+TGG | + | chr3.1:68708517-68708536 | None:intergenic | 30.0% |
| ! | TGAAGAGTGTAATTTCCAAT+AGG | + | chr3.1:68711160-68711179 | None:intergenic | 30.0% |
| !! | ACTATAACGTAGTGGAATTT+TGG | - | chr3.1:68708791-68708810 | MS.gene79125:intron | 30.0% |
| !! | GATACTGGTTCTTACTATTA+TGG | - | chr3.1:68710940-68710959 | MS.gene79125:intron | 30.0% |
| !! | GTAAAGAAAAAGCATTGAGT+TGG | - | chr3.1:68709009-68709028 | MS.gene79125:intron | 30.0% |
| !! | TTTAGTTCTCAACCTAAAAG+CGG | + | chr3.1:68711080-68711099 | None:intergenic | 30.0% |
| !!! | AAAGTTTTAAACACCATCAC+TGG | + | chr3.1:68708354-68708373 | None:intergenic | 30.0% |
| !!! | TGTGACTTTTGAGGTAATAA+TGG | - | chr3.1:68708296-68708315 | MS.gene79125:intron | 30.0% |
| AAAATCACGGTAATCATCCT+CGG | + | chr3.1:68711477-68711496 | None:intergenic | 35.0% | |
| AATGGGGTGATTATACAAGA+CGG | - | chr3.1:68711008-68711027 | MS.gene79125:intron | 35.0% | |
| AATTTCCAATAGGCATGTCA+CGG | + | chr3.1:68711150-68711169 | None:intergenic | 35.0% | |
| ACAGGTCTAAGAGAATTTGA+TGG | - | chr3.1:68711515-68711534 | MS.gene79125:CDS | 35.0% | |
| ACTAATGTGGCAAATACATG+GGG | - | chr3.1:68708177-68708196 | MS.gene79125:intron | 35.0% | |
| ACTCAATCTTGAGAGAAGTT+TGG | - | chr3.1:68710757-68710776 | MS.gene79125:intron | 35.0% | |
| ACTTTGACCAGTATTCAACT+TGG | + | chr3.1:68709646-68709665 | None:intergenic | 35.0% | |
| AGAGAAGTTTGGATCATGAT+GGG | - | chr3.1:68710768-68710787 | MS.gene79125:intron | 35.0% | |
| AGCCCATATCAATTGATATC+AGG | - | chr3.1:68709107-68709126 | MS.gene79125:intron | 35.0% | |
| AGGATTAGAACCAAACCAAA+TGG | + | chr3.1:68709550-68709569 | None:intergenic | 35.0% | |
| AGGGTTATATCAGTCAAATG+GGG | - | chr3.1:68710992-68711011 | MS.gene79125:intron | 35.0% | |
| AGTAGTAGTATTTAGGGAAG+GGG | - | chr3.1:68710601-68710620 | MS.gene79125:intron | 35.0% | |
| AGTGTATGCCCTAAATGTAA+GGG | + | chr3.1:68711313-68711332 | None:intergenic | 35.0% | |
| ATAGCATAGCTTACCATTTC+CGG | + | chr3.1:68710864-68710883 | None:intergenic | 35.0% | |
| CAAGAAAAAGGAACAGCAAA+AGG | + | chr3.1:68710339-68710358 | None:intergenic | 35.0% | |
| CACTACGTTATAGTGGTATA+GGG | + | chr3.1:68708785-68708804 | None:intergenic | 35.0% | |
| CAGTAGTAGTATTTAGGGAA+GGG | - | chr3.1:68710600-68710619 | MS.gene79125:intron | 35.0% | |
| CGACCTGATATCAATTGATA+TGG | + | chr3.1:68709113-68709132 | None:intergenic | 35.0% | |
| CTAATCCTAGATTGCTGTAT+TGG | - | chr3.1:68709562-68709581 | MS.gene79125:intron | 35.0% | |
| CTTCAAAGACATACCTTCAA+CGG | + | chr3.1:68709409-68709428 | None:intergenic | 35.0% | |
| GAAGGGTTATATCAGTCAAA+TGG | - | chr3.1:68710990-68711009 | MS.gene79125:intron | 35.0% | |
| GAAGTCGAATAAGCATCTTT+GGG | - | chr3.1:68707192-68707211 | MS.gene79125:intron | 35.0% | |
| GACTAATGTGGCAAATACAT+GGG | - | chr3.1:68708176-68708195 | MS.gene79125:intron | 35.0% | |
| GAGAATGATGAGAAACATGA+AGG | + | chr3.1:68710704-68710723 | None:intergenic | 35.0% | |
| GTCATATAGGCATACTTTGA+TGG | + | chr3.1:68711408-68711427 | None:intergenic | 35.0% | |
| GTGAATTTAACTGCTACCAT+AGG | - | chr3.1:68710302-68710321 | MS.gene79125:intron | 35.0% | |
| GTGCTTCTTGTATTATGAAG+TGG | - | chr3.1:68708587-68708606 | MS.gene79125:intron | 35.0% | |
| GTGTGGTGTGAAATAAAATC+CGG | - | chr3.1:68707783-68707802 | MS.gene79125:intron | 35.0% | |
| TAACCTATTAGGTCCAATCT+CGG | + | chr3.1:68710026-68710045 | None:intergenic | 35.0% | |
| TCAACCAAGTCCAACAAATT+TGG | - | chr3.1:68708504-68708523 | MS.gene79125:intron | 35.0% | |
| TCCTACAGATTACACTAGTA+CGG | + | chr3.1:68710446-68710465 | None:intergenic | 35.0% | |
| TGGCAGAGATTTGATCTAAT+AGG | - | chr3.1:68710191-68710210 | MS.gene79125:intron | 35.0% | |
| TGGTAAGCTATGCTATGTAA+AGG | - | chr3.1:68710868-68710887 | MS.gene79125:intron | 35.0% | |
| TGTAATCTGTAGGAATGTTC+TGG | - | chr3.1:68710452-68710471 | MS.gene79125:intron | 35.0% | |
| TTAAGAGAGAGAAGTAAGTG+TGG | - | chr3.1:68707385-68707404 | MS.gene79125:CDS | 35.0% | |
| TTCAAAGACATACCTTCAAC+GGG | + | chr3.1:68709408-68709427 | None:intergenic | 35.0% | |
| TTCTTACTATTATGGCAGGT+GGG | - | chr3.1:68710948-68710967 | MS.gene79125:intron | 35.0% | |
| TTGCCACATTAGTCCTTAAT+GGG | + | chr3.1:68708170-68708189 | None:intergenic | 35.0% | |
| TTGGTTGAATGCTAACTCTT+TGG | + | chr3.1:68708492-68708511 | None:intergenic | 35.0% | |
| TTGTTGACCCCTTACATTTA+GGG | - | chr3.1:68711302-68711321 | MS.gene79125:CDS | 35.0% | |
| TTTGCCACATTAGTCCTTAA+TGG | + | chr3.1:68708171-68708190 | None:intergenic | 35.0% | |
| TTTGTTGACCCCTTACATTT+AGG | - | chr3.1:68711301-68711320 | MS.gene79125:CDS | 35.0% | |
| ! | AATACTTGGCAATTAGCTTC+TGG | - | chr3.1:68710725-68710744 | MS.gene79125:intron | 35.0% |
| ! | AATAGCATATGGTGGAACAA+TGG | + | chr3.1:68708825-68708844 | None:intergenic | 35.0% |
| ! | ATTCGGTTTGATGATTCAAG+AGG | + | chr3.1:68709230-68709249 | None:intergenic | 35.0% |
| ! | ATTTCGCCCATTTTGTCTTT+AGG | - | chr3.1:68709320-68709339 | MS.gene79125:intron | 35.0% |
| ! | CGACTATGTGTACTGATAAA+TGG | - | chr3.1:68707260-68707279 | MS.gene79125:intron | 35.0% |
| ! | CGTAAAGAATGTGACTTTTG+AGG | - | chr3.1:68708287-68708306 | MS.gene79125:intron | 35.0% |
| ! | CTATGTGTACTGATAAATGG+AGG | - | chr3.1:68707263-68707282 | MS.gene79125:intron | 35.0% |
| ! | CTTGATTAGTTGATTCCATG+TGG | - | chr3.1:68709524-68709543 | MS.gene79125:intron | 35.0% |
| ! | GATGATGCCAACATTTCTTT+TGG | - | chr3.1:68709381-68709400 | MS.gene79125:intron | 35.0% |
| ! | GCAAATACATGGGGTTTTTA+TGG | - | chr3.1:68708186-68708205 | MS.gene79125:intron | 35.0% |
| ! | GCTAACTTGTGCAAATTTCA+TGG | - | chr3.1:68711214-68711233 | MS.gene79125:CDS | 35.0% |
| ! | TATTGACAACACTTGACTTG+TGG | - | chr3.1:68708410-68708429 | MS.gene79125:intron | 35.0% |
| ! | TGAGAACTAAACGTGCATTT+TGG | - | chr3.1:68711089-68711108 | MS.gene79125:intron | 35.0% |
| ! | TTCGGTTTGATGATTCAAGA+GGG | + | chr3.1:68709229-68709248 | None:intergenic | 35.0% |
| ! | TTGACAAATAGCAGCTTTAG+CGG | - | chr3.1:68708759-68708778 | MS.gene79125:intron | 35.0% |
| ! | TTGCATAGTGGAATTTGAAC+AGG | - | chr3.1:68708049-68708068 | MS.gene79125:intron | 35.0% |
| !! | AACTAAACGTGCATTTTGGT+TGG | - | chr3.1:68711093-68711112 | MS.gene79125:intron | 35.0% |
| !! | CGCTTTCTTATTTCTGATAC+TGG | - | chr3.1:68710925-68710944 | MS.gene79125:intron | 35.0% |
| !! | GGGATATCGTTTTGATGTTT+AGG | - | chr3.1:68710652-68710671 | MS.gene79125:intron | 35.0% |
| !! | TGAGAGAAAAGGGTTTTGAT+CGG | - | chr3.1:68707233-68707252 | MS.gene79125:intron | 35.0% |
| AACGGGTCCAAAAGAAATGT+TGG | + | chr3.1:68709391-68709410 | None:intergenic | 40.0% | |
| AAGCCATAAAGGAGGCAATT+AGG | - | chr3.1:68711053-68711072 | MS.gene79125:intron | 40.0% | |
| ACCAGTATTCAACTTGGCTA+GGG | + | chr3.1:68709640-68709659 | None:intergenic | 40.0% | |
| ACTGCAATTTGAAGGTTCTC+AGG | - | chr3.1:68709189-68709208 | MS.gene79125:intron | 40.0% | |
| AGATTTGTCCCTAAAATCGG+TGG | - | chr3.1:68707720-68707739 | MS.gene79125:CDS | 40.0% | |
| AGCCATAAAGGAGGCAATTA+GGG | - | chr3.1:68711054-68711073 | MS.gene79125:intron | 40.0% | |
| ATCTTCTCTTCAGTATGCAC+AGG | + | chr3.1:68711446-68711465 | None:intergenic | 40.0% | |
| ATGACTCAGAACAGCAACTA+GGG | + | chr3.1:68709274-68709293 | None:intergenic | 40.0% | |
| ATGTTGTCTATTGCAGAGAG+TGG | + | chr3.1:68708929-68708948 | None:intergenic | 40.0% | |
| CAGAAACGGTGCACAAAATA+CGG | + | chr3.1:68711350-68711369 | None:intergenic | 40.0% | |
| CAGTGTATGCCCTAAATGTA+AGG | + | chr3.1:68711314-68711333 | None:intergenic | 40.0% | |
| CCACTACGTTATAGTGGTAT+AGG | + | chr3.1:68708786-68708805 | None:intergenic | 40.0% | |
| CCAGTAGTAGTATTTAGGGA+AGG | - | chr3.1:68710599-68710618 | MS.gene79125:intron | 40.0% | |
| CCCAGATTTGTCCCTAAAAT+CGG | - | chr3.1:68707717-68707736 | MS.gene79125:CDS | 40.0% | |
| CCTATACCACTATAACGTAG+TGG | - | chr3.1:68708783-68708802 | MS.gene79125:intron | 40.0% | |
| CCTTCCCTAAATACTACTAC+TGG | + | chr3.1:68710602-68710621 | None:intergenic | 40.0% | |
| CGAACTTCCTAAAGCTATAC+AGG | + | chr3.1:68709035-68709054 | None:intergenic | 40.0% | |
| CGAAGTCGAATAAGCATCTT+TGG | - | chr3.1:68707191-68707210 | MS.gene79125:intron | 40.0% | |
| CGGTTTATGGTTGAACCAAT+CGG | - | chr3.1:68710236-68710255 | MS.gene79125:intron | 40.0% | |
| CTCTCTGCAATAGACAACAT+TGG | - | chr3.1:68708929-68708948 | MS.gene79125:intron | 40.0% | |
| CTGCAATTTGAAGGTTCTCA+GGG | - | chr3.1:68709190-68709209 | MS.gene79125:intron | 40.0% | |
| CTTCTCTCAAGATTGAGTGT+TGG | + | chr3.1:68710755-68710774 | None:intergenic | 40.0% | |
| GACTTATTATGTTGCTGTGC+AGG | - | chr3.1:68709354-68709373 | MS.gene79125:intron | 40.0% | |
| GAGAGAAGTTTGGATCATGA+TGG | - | chr3.1:68710767-68710786 | MS.gene79125:intron | 40.0% | |
| GGACTAATGTGGCAAATACA+TGG | - | chr3.1:68708175-68708194 | MS.gene79125:intron | 40.0% | |
| GGTGATTATACAAGACGGAT+AGG | - | chr3.1:68711013-68711032 | MS.gene79125:intron | 40.0% | |
| GGTGTGAAATAAAATCCGGA+GGG | - | chr3.1:68707787-68707806 | MS.gene79125:intron | 40.0% | |
| GTAGTAGTATTTAGGGAAGG+GGG | - | chr3.1:68710602-68710621 | MS.gene79125:intron | 40.0% | |
| GTGTATGCCCTAAATGTAAG+GGG | + | chr3.1:68711312-68711331 | None:intergenic | 40.0% | |
| GTTCTTACTATTATGGCAGG+TGG | - | chr3.1:68710947-68710966 | MS.gene79125:intron | 40.0% | |
| TACACTCTTCACCTTGATGA+AGG | - | chr3.1:68711169-68711188 | MS.gene79125:CDS | 40.0% | |
| TAGCATAGCTTACCATTTCC+GGG | + | chr3.1:68710863-68710882 | None:intergenic | 40.0% | |
| TATAGCAATCTAGCCGAGAT+TGG | - | chr3.1:68710010-68710029 | MS.gene79125:intron | 40.0% | |
| TATGGTCAGACTCGTCATAT+AGG | + | chr3.1:68711421-68711440 | None:intergenic | 40.0% | |
| TATGTAGGCTTTCAAACGTG+TGG | - | chr3.1:68707766-68707785 | MS.gene79125:intron | 40.0% | |
| TCACAAGTGCGTGTTTATGT+AGG | - | chr3.1:68707751-68707770 | MS.gene79125:intron | 40.0% | |
| TCAGCGAAGATGAGAGAAAA+GGG | - | chr3.1:68707223-68707242 | MS.gene79125:intron | 40.0% | |
| TCCAAAAAGAAGGGCTGATT+TGG | - | chr3.1:68708527-68708546 | MS.gene79125:intron | 40.0% | |
| TCTTACTATTATGGCAGGTG+GGG | - | chr3.1:68710949-68710968 | MS.gene79125:intron | 40.0% | |
| TCTTCACCTTGATGAAGGTT+GGG | - | chr3.1:68711174-68711193 | MS.gene79125:CDS | 40.0% | |
| TCTTCTCTTCAGTATGCACA+GGG | + | chr3.1:68711445-68711464 | None:intergenic | 40.0% | |
| TGATAGCACTTGCACAAACA+GGG | - | chr3.1:68708096-68708115 | MS.gene79125:intron | 40.0% | |
| TGCAATTTGAAGGTTCTCAG+GGG | - | chr3.1:68709191-68709210 | MS.gene79125:intron | 40.0% | |
| TGGTGTGAAATAAAATCCGG+AGG | - | chr3.1:68707786-68707805 | MS.gene79125:intron | 40.0% | |
| TTCAGCGAAGATGAGAGAAA+AGG | - | chr3.1:68707222-68707241 | MS.gene79125:intron | 40.0% | |
| TTCATATCCTGCTACGCAAA+AGG | + | chr3.1:68707959-68707978 | None:intergenic | 40.0% | |
| TTGTCAAATAGCGGCTATAG+TGG | - | chr3.1:68708857-68708876 | MS.gene79125:intron | 40.0% | |
| TTTCTCTCCAATTCCAAGGA+GGG | + | chr3.1:68710838-68710857 | None:intergenic | 40.0% | |
| ! | AACCAAGATGCACACCTTTT+GGG | + | chr3.1:68708708-68708727 | None:intergenic | 40.0% |
| ! | ACCAAATCAGCCCTTCTTTT+TGG | + | chr3.1:68708531-68708550 | None:intergenic | 40.0% |
| ! | ATCTAATAGGTTGACCACAC+AGG | - | chr3.1:68710204-68710223 | MS.gene79125:intron | 40.0% |
| ! | ATGGGCTGAGTATCTACTAA+GGG | + | chr3.1:68709094-68709113 | None:intergenic | 40.0% |
| ! | ATTTCTTTTGGACCCGTTGA+AGG | - | chr3.1:68709393-68709412 | MS.gene79125:intron | 40.0% |
| ! | CGAATTATAGTGGAAGCATG+CGG | - | chr3.1:68707831-68707850 | MS.gene79125:intron | 40.0% |
| ! | CGATTGGTTCAACCATAAAC+CGG | + | chr3.1:68710238-68710257 | None:intergenic | 40.0% |
| ! | CTGGTTCTTACTATTATGGC+AGG | - | chr3.1:68710944-68710963 | MS.gene79125:intron | 40.0% |
| ! | CTGTTCTGAGTCATGACATT+TGG | - | chr3.1:68709280-68709299 | MS.gene79125:intron | 40.0% |
| ! | GGATGATTACCGTGATTTTC+TGG | - | chr3.1:68711478-68711497 | MS.gene79125:CDS | 40.0% |
| ! | GTTTGATGATTCAAGAGGGT+AGG | + | chr3.1:68709225-68709244 | None:intergenic | 40.0% |
| ! | TAACCAAGATGCACACCTTT+TGG | + | chr3.1:68708709-68708728 | None:intergenic | 40.0% |
| ! | TATGGGCTGAGTATCTACTA+AGG | + | chr3.1:68709095-68709114 | None:intergenic | 40.0% |
| ! | TGGATTTAAGTTTGATGCCC+CGG | + | chr3.1:68708384-68708403 | None:intergenic | 40.0% |
| ! | TTCAACTTGGCTAGGGTATT+AGG | + | chr3.1:68709633-68709652 | None:intergenic | 40.0% |
| ! | TTGATAGCACTTGCACAAAC+AGG | - | chr3.1:68708095-68708114 | MS.gene79125:intron | 40.0% |
| ! | TTTGCGGTTGTTGTTGTTGA+AGG | + | chr3.1:68707030-68707049 | None:intergenic | 40.0% |
| !! | ACAAGACGGATAGGTATTGA+TGG | - | chr3.1:68711022-68711041 | MS.gene79125:intron | 40.0% |
| !! | ACCGATTTTAGGGACAAATC+TGG | + | chr3.1:68707721-68707740 | None:intergenic | 40.0% |
| !! | ATAGCTTTAGGAAGTTCGCT+TGG | - | chr3.1:68709037-68709056 | MS.gene79125:intron | 40.0% |
| !! | CCGATTTTAGGGACAAATCT+GGG | + | chr3.1:68707720-68707739 | None:intergenic | 40.0% |
| !! | CGATTTTAGGGACAAATCTG+GGG | + | chr3.1:68707719-68707738 | None:intergenic | 40.0% |
| !! | GGACTGGATTTGTTGGAATT+TGG | + | chr3.1:68708687-68708706 | None:intergenic | 40.0% |
| !! | TGGACCAAATTTGTTGGACT+TGG | + | chr3.1:68708511-68708530 | None:intergenic | 40.0% |
| !!! | TAAACGTGCATTTTGGTTGG+AGG | - | chr3.1:68711096-68711115 | MS.gene79125:intron | 40.0% |
| AAAGGGTAACAGGTCACCTA+TGG | + | chr3.1:68710321-68710340 | None:intergenic | 45.0% | |
| AACCAAACCAAATGGCCACA+TGG | + | chr3.1:68709542-68709561 | None:intergenic | 45.0% | |
| AATATGGATGATCTTCGGCC+TGG | - | chr3.1:68711554-68711573 | MS.gene79125:CDS | 45.0% | |
| ACGGTGCACAAAATACGGTT+TGG | + | chr3.1:68711345-68711364 | None:intergenic | 45.0% | |
| AGGAACAGCAAAAGGGTAAC+AGG | + | chr3.1:68710331-68710350 | None:intergenic | 45.0% | |
| ATTGACCGTGACATGCCTAT+TGG | - | chr3.1:68711142-68711161 | MS.gene79125:CDS | 45.0% | |
| ATTGCCTCCTTTATGGCTTC+CGG | + | chr3.1:68711052-68711071 | None:intergenic | 45.0% | |
| CAATTTGAAGGTTCTCAGGG+GGG | - | chr3.1:68709193-68709212 | MS.gene79125:intron | 45.0% | |
| CATGACTCAGAACAGCAACT+AGG | + | chr3.1:68709275-68709294 | None:intergenic | 45.0% | |
| CCAACAAATCCAGTCCCAAA+AGG | - | chr3.1:68708691-68708710 | MS.gene79125:intron | 45.0% | |
| CTCTTCACCTTGATGAAGGT+TGG | - | chr3.1:68711173-68711192 | MS.gene79125:CDS | 45.0% | |
| CTTCAGTATGCACAGGGATA+TGG | + | chr3.1:68711439-68711458 | None:intergenic | 45.0% | |
| GAAGTCATTCAGCTCATGTC+TGG | - | chr3.1:68710492-68710511 | MS.gene79125:intron | 45.0% | |
| GACCAGTATTCAACTTGGCT+AGG | + | chr3.1:68709641-68709660 | None:intergenic | 45.0% | |
| GCAATTTGAAGGTTCTCAGG+GGG | - | chr3.1:68709192-68709211 | MS.gene79125:intron | 45.0% | |
| GCCGTACTAGTGTAATCTGT+AGG | - | chr3.1:68710442-68710461 | MS.gene79125:intron | 45.0% | |
| GCTATAGCACTATTGCACAG+AGG | - | chr3.1:68708881-68708900 | MS.gene79125:intron | 45.0% | |
| GGACCCATTAAGGACTAATG+TGG | - | chr3.1:68708164-68708183 | MS.gene79125:intron | 45.0% | |
| GGAGTTTCTCTCCAATTCCA+AGG | + | chr3.1:68710842-68710861 | None:intergenic | 45.0% | |
| GGGAAGGGGGTTGTATTTAA+AGG | - | chr3.1:68710615-68710634 | MS.gene79125:intron | 45.0% | |
| GTACAATGCATGTCCAGTGA+TGG | - | chr3.1:68708338-68708357 | MS.gene79125:intron | 45.0% | |
| GTATTAGGTTAGTGAGTCGC+TGG | + | chr3.1:68709618-68709637 | None:intergenic | 45.0% | |
| GTGCGTCTAGAAAATGAGAC+AGG | + | chr3.1:68710272-68710291 | None:intergenic | 45.0% | |
| GTTTCTCTCCAATTCCAAGG+AGG | + | chr3.1:68710839-68710858 | None:intergenic | 45.0% | |
| TAGCCGAGATTGGACCTAAT+AGG | - | chr3.1:68710020-68710039 | MS.gene79125:intron | 45.0% | |
| TATGGTTGAACCAATCGGAC+CGG | - | chr3.1:68710241-68710260 | MS.gene79125:intron | 45.0% | |
| TGGAATTGGAGAGAAACTCC+CGG | - | chr3.1:68710842-68710861 | MS.gene79125:intron | 45.0% | |
| TGTGCAAGTGCTATCAACTG+CGG | + | chr3.1:68708092-68708111 | None:intergenic | 45.0% | |
| TTCCATGTGGCCATTTGGTT+TGG | - | chr3.1:68709537-68709556 | MS.gene79125:intron | 45.0% | |
| TTGCAGAGAGTGGAGAATAG+CGG | + | chr3.1:68708919-68708938 | None:intergenic | 45.0% | |
| TTGTAGAAATCGATTGGGCG+AGG | + | chr3.1:68706920-68706939 | None:intergenic | 45.0% | |
| ! | AAAGCGAAGCATCATGATCG+AGG | - | chr3.1:68707307-68707326 | MS.gene79125:CDS | 45.0% |
| ! | AAAGTCAGTCTTGCTGTGGA+AGG | - | chr3.1:68710972-68710991 | MS.gene79125:intron | 45.0% |
| ! | AAGTCAGTCTTGCTGTGGAA+GGG | - | chr3.1:68710973-68710992 | MS.gene79125:intron | 45.0% |
| ! | ACCCTAGCCAAGTTGAATAC+TGG | - | chr3.1:68709636-68709655 | MS.gene79125:intron | 45.0% |
| ! | AGCATATGGTGGAACAATGG+TGG | + | chr3.1:68708822-68708841 | None:intergenic | 45.0% |
| ! | CTATCAACCTTTTGCGTAGC+AGG | - | chr3.1:68707949-68707968 | MS.gene79125:intron | 45.0% |
| ! | GAGTTGGCCTGTATAGCTTT+AGG | - | chr3.1:68709025-68709044 | MS.gene79125:intron | 45.0% |
| ! | GTTGATTCCATGTGGCCATT+TGG | - | chr3.1:68709532-68709551 | MS.gene79125:intron | 45.0% |
| ! | GTTGTTGTTGTTGAAGGTGG+TGG | + | chr3.1:68707024-68707043 | None:intergenic | 45.0% |
| !! | GATAGGTATTGATGGCACTC+CGG | - | chr3.1:68711030-68711049 | MS.gene79125:intron | 45.0% |
| !! | TTGCTGTAGTGGACCCATTA+AGG | - | chr3.1:68708154-68708173 | MS.gene79125:intron | 45.0% |
| !!! | ACTTGTCTGCCACCGATTTT+AGG | + | chr3.1:68707732-68707751 | None:intergenic | 45.0% |
| !!! | CCTTTTGGGACTGGATTTGT+TGG | + | chr3.1:68708694-68708713 | None:intergenic | 45.0% |
| !!! | CTTGTCTGCCACCGATTTTA+GGG | + | chr3.1:68707731-68707750 | None:intergenic | 45.0% |
| !!! | TGCATTTTGGTTGGAGGATG+AGG | - | chr3.1:68711102-68711121 | MS.gene79125:CDS | 45.0% |
| !!! | AAAGTATATATATATTTTTT+AGG | - | chr3.1:68709951-68709970 | MS.gene79125:intron | 5.0% |
| !!! | AAGTATATATATATTTTTTA+GGG | - | chr3.1:68709952-68709971 | MS.gene79125:intron | 5.0% |
| AAAGAAACGCGCGGAAACCT+GGG | - | chr3.1:68707105-68707124 | MS.gene79125:intron | 50.0% | |
| AAGCATCATGATCGAGGTGG+TGG | - | chr3.1:68707313-68707332 | MS.gene79125:CDS | 50.0% | |
| ACTGAGCCCAACCTTCATCA+AGG | + | chr3.1:68711183-68711202 | None:intergenic | 50.0% | |
| AGTGGAATTTGAACAGGCCG+CGG | - | chr3.1:68708055-68708074 | MS.gene79125:intron | 50.0% | |
| CAAAGCTCCAAAGAAACGCG+CGG | - | chr3.1:68707096-68707115 | MS.gene79125:intron | 50.0% | |
| GAAAATGAGACAGGACCAGC+CGG | + | chr3.1:68710263-68710282 | None:intergenic | 50.0% | |
| GGCCCTAATTGCCTCCTTTA+TGG | + | chr3.1:68711059-68711078 | None:intergenic | 50.0% | |
| GGTCACACTAGTTGCTGTAG+TGG | - | chr3.1:68708143-68708162 | MS.gene79125:intron | 50.0% | |
| GTGCTATCAACTGCGGATCA+CGG | + | chr3.1:68708085-68708104 | None:intergenic | 50.0% | |
| TCAACCATAAACCGGACCGA+AGG | + | chr3.1:68710230-68710249 | None:intergenic | 50.0% | |
| TCAACTCACGCCTCGGTATA+TGG | + | chr3.1:68711582-68711601 | None:intergenic | 50.0% | |
| TCATTCAGCTCATGTCTGGC+TGG | - | chr3.1:68710496-68710515 | MS.gene79125:intron | 50.0% | |
| TCGGCGGTGAGAATCATTTG+CGG | + | chr3.1:68707046-68707065 | None:intergenic | 50.0% | |
| TGGAGAGAAACTCCCGGAAA+TGG | - | chr3.1:68710848-68710867 | MS.gene79125:intron | 50.0% | |
| TGGTGGTTGAAGATCGGTGT+TGG | + | chr3.1:68706978-68706997 | None:intergenic | 50.0% | |
| ! | AGAAGCACGCGACATGATGA+TGG | - | chr3.1:68706943-68706962 | MS.gene79125:CDS | 50.0% |
| ! | GCGGTTGTTGTTGTTGAAGG+TGG | + | chr3.1:68707027-68707046 | None:intergenic | 50.0% |
| ! | GGAGCTTTGATCTCCATCTC+AGG | + | chr3.1:68707085-68707104 | None:intergenic | 50.0% |
| ! | GTCCCAAAAGGTGTGCATCT+TGG | - | chr3.1:68708703-68708722 | MS.gene79125:intron | 50.0% |
| ! | GTTGTTGTTGAAGGTGGTGG+TGG | + | chr3.1:68707021-68707040 | None:intergenic | 50.0% |
| !! | ACCGTGATTTTCTGGCACGT+CGG | - | chr3.1:68711486-68711505 | MS.gene79125:CDS | 50.0% |
| !!! | AGATGCACACCTTTTGGGAC+TGG | + | chr3.1:68708703-68708722 | None:intergenic | 50.0% |
| !!! | AGGCAATTAGGGCCGCTTTT+AGG | - | chr3.1:68711065-68711084 | MS.gene79125:intron | 50.0% |
| ACAGGCTATCGTGTTCCCTC+CGG | + | chr3.1:68707805-68707824 | None:intergenic | 55.0% | |
| AGGTTGACCACACAGGCCTT+CGG | - | chr3.1:68710211-68710230 | MS.gene79125:intron | 55.0% | |
| CAAAGAAACGCGCGGAAACC+TGG | - | chr3.1:68707104-68707123 | MS.gene79125:intron | 55.0% | |
| CACTCCGGAAGCCATAAAGG+AGG | - | chr3.1:68711045-68711064 | MS.gene79125:intron | 55.0% | |
| CAGGTTTCCGCGCGTTTCTT+TGG | + | chr3.1:68707106-68707125 | None:intergenic | 55.0% | |
| CCCGACGTGCCAGAAAATCA+CGG | + | chr3.1:68711490-68711509 | None:intergenic | 55.0% | |
| GACGAGACACGAAGCCTCAT+TGG | - | chr3.1:68707133-68707152 | MS.gene79125:intron | 55.0% | |
| GACTTGTGGCACAGATGCAC+AGG | - | chr3.1:68708424-68708443 | MS.gene79125:intron | 55.0% | |
| GCAGCAGATGTTGCAGCAAG+CGG | - | chr3.1:68710809-68710828 | MS.gene79125:intron | 55.0% | |
| GGGGAAAGTCAGTCTTGCTG+TGG | - | chr3.1:68710968-68710987 | MS.gene79125:intron | 55.0% | |
| TCGTGTCTCGTCTTGAACCC+AGG | + | chr3.1:68707125-68707144 | None:intergenic | 55.0% | |
| TCTCGCGTCGTAGACCAATG+AGG | + | chr3.1:68707150-68707169 | None:intergenic | 55.0% | |
| TGCAACATCTGCTGCGGCAA+TGG | + | chr3.1:68710804-68710823 | None:intergenic | 55.0% | |
| TGGCACTCCGGAAGCCATAA+AGG | - | chr3.1:68711042-68711061 | MS.gene79125:intron | 55.0% | |
| ! | CATTGGTCTACGACGCGAGA+TGG | - | chr3.1:68707150-68707169 | MS.gene79125:intron | 55.0% |
| ! | GCGAAGCATCATGATCGAGG+TGG | - | chr3.1:68707310-68707329 | MS.gene79125:CDS | 55.0% |
| ! | GCTTGCTGCAACATCTGCTG+CGG | + | chr3.1:68710810-68710829 | None:intergenic | 55.0% |
| !! | ATTTTCTGGCACGTCGGGCT+TGG | - | chr3.1:68711492-68711511 | MS.gene79125:CDS | 55.0% |
| !! | CATGATCGAGGTGGTGGAAG+TGG | - | chr3.1:68707319-68707338 | MS.gene79125:CDS | 55.0% |
| !! | CCGTGATTTTCTGGCACGTC+GGG | - | chr3.1:68711487-68711506 | MS.gene79125:CDS | 55.0% |
| !! | CGGTGGTGGTGGTTGAAGAT+CGG | + | chr3.1:68706984-68707003 | None:intergenic | 55.0% |
| !! | GTGGTGGAAGTGGTTCTGGT+GGG | - | chr3.1:68707329-68707348 | MS.gene79125:CDS | 55.0% |
| !! | TGAAGGTGGTGGTGGTGTTG+CGG | + | chr3.1:68707013-68707032 | None:intergenic | 55.0% |
| ACGCCTCGGTATATGGCACC+AGG | + | chr3.1:68711575-68711594 | None:intergenic | 60.0% | |
| ATTCTCACCGCCGAGAGCAG+CGG | - | chr3.1:68707052-68707071 | MS.gene79125:CDS | 60.0% | |
| CAGGCCTTCGGTCCGGTTTA+TGG | - | chr3.1:68710223-68710242 | MS.gene79125:intron | 60.0% | |
| CTGCGGATCACGGAAAACCG+CGG | + | chr3.1:68708075-68708094 | None:intergenic | 60.0% | |
| GCGGAGTCCCTCCTTGGAAT+TGG | - | chr3.1:68710828-68710847 | MS.gene79125:intron | 60.0% | |
| GTTGAACCAATCGGACCGGC+TGG | - | chr3.1:68710245-68710264 | MS.gene79125:intron | 60.0% | |
| TCTGCTGCGGCAATGGCAAG+AGG | + | chr3.1:68710797-68710816 | None:intergenic | 60.0% | |
| !! | CGAGGTGGTGGAAGTGGTTC+TGG | - | chr3.1:68707325-68707344 | MS.gene79125:CDS | 60.0% |
| !! | GGTGGTGGAAGTGGTTCTGG+TGG | - | chr3.1:68707328-68707347 | MS.gene79125:CDS | 60.0% |
| AACCGGACCGAAGGCCTGTG+TGG | + | chr3.1:68710221-68710240 | None:intergenic | 65.0% | |
| ACAGGACCAGCCGGTCCGAT+TGG | + | chr3.1:68710254-68710273 | None:intergenic | 65.0% | |
| AGGATCGTCGCCGCTGCTCT+CGG | + | chr3.1:68707065-68707084 | None:intergenic | 65.0% | |
| CAGCAAGCGGAGTCCCTCCT+TGG | - | chr3.1:68710822-68710841 | MS.gene79125:intron | 65.0% | |
| CAGCGGCGACGATCCTGAGA+TGG | - | chr3.1:68707069-68707088 | MS.gene79125:CDS | 65.0% | |
| GACCACACAGGCCTTCGGTC+CGG | - | chr3.1:68710216-68710235 | MS.gene79125:intron | 65.0% | |
| !! | AGGTGGTGGTGGTGTTGCGG+CGG | + | chr3.1:68707010-68707029 | None:intergenic | 65.0% |
| !! | CGGCCTGGTGCCATATACCG+AGG | - | chr3.1:68711569-68711588 | MS.gene79125:CDS | 65.0% |
| ATCGTCGCCGCTGCTCTCGG+CGG | + | chr3.1:68707062-68707081 | None:intergenic | 70.0% | |
| CTGGCACGTCGGGCTTGGAC+AGG | - | chr3.1:68711497-68711516 | MS.gene79125:CDS | 70.0% | |
| !! | TGGTGGTGGTGTTGCGGCGG+TGG | + | chr3.1:68707007-68707026 | None:intergenic | 70.0% |
| !! | TGGTGGTGTTGCGGCGGTGG+CGG | + | chr3.1:68707004-68707023 | None:intergenic | 70.0% |
| ! | TGTTGCGGCGGTGGCGGTGG+TGG | + | chr3.1:68706998-68707017 | None:intergenic | 75.0% |
| !! | TGGTGTTGCGGCGGTGGCGG+TGG | + | chr3.1:68707001-68707020 | None:intergenic | 75.0% |
| !! | TGCGGCGGTGGCGGTGGTGG+TGG | + | chr3.1:68706995-68707014 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 68706896 | 68711601 | 68706896 | ID=MS.gene79125 |
| chr3.1 | mRNA | 68706896 | 68711601 | 68706896 | ID=MS.gene79125.t1;Parent=MS.gene79125 |
| chr3.1 | exon | 68711100 | 68711601 | 68711100 | ID=MS.gene79125.t1.exon1;Parent=MS.gene79125.t1 |
| chr3.1 | CDS | 68711100 | 68711601 | 68711100 | ID=cds.MS.gene79125.t1;Parent=MS.gene79125.t1 |
| chr3.1 | exon | 68709083 | 68709121 | 68709083 | ID=MS.gene79125.t1.exon2;Parent=MS.gene79125.t1 |
| chr3.1 | CDS | 68709083 | 68709121 | 68709083 | ID=cds.MS.gene79125.t1;Parent=MS.gene79125.t1 |
| chr3.1 | exon | 68707628 | 68707756 | 68707628 | ID=MS.gene79125.t1.exon3;Parent=MS.gene79125.t1 |
| chr3.1 | CDS | 68707628 | 68707756 | 68707628 | ID=cds.MS.gene79125.t1;Parent=MS.gene79125.t1 |
| chr3.1 | exon | 68707307 | 68707531 | 68707307 | ID=MS.gene79125.t1.exon4;Parent=MS.gene79125.t1 |
| chr3.1 | CDS | 68707307 | 68707531 | 68707307 | ID=cds.MS.gene79125.t1;Parent=MS.gene79125.t1 |
| chr3.1 | exon | 68706896 | 68707098 | 68706896 | ID=MS.gene79125.t1.exon5;Parent=MS.gene79125.t1 |
| chr3.1 | CDS | 68706896 | 68707098 | 68706896 | ID=cds.MS.gene79125.t1;Parent=MS.gene79125.t1 |
| Gene Sequence |
| Protein sequence |
