Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045479.t1 | XP_024638558.1 | 97.9 | 424 | 9 | 0 | 1 | 424 | 1 | 424 | 1.90E-246 | 861.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045479.t1 | P46643 | 81.0 | 406 | 77 | 0 | 19 | 424 | 25 | 430 | 1.6e-201 | 703.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045479.t1 | G7JCN3 | 97.9 | 424 | 9 | 0 | 1 | 424 | 1 | 424 | 1.4e-246 | 861.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene016021 | MS.gene045479 | PPI |
| MS.gene060918 | MS.gene045479 | PPI |
| MS.gene33167 | MS.gene045479 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045479.t1 | MTR_4g080140 | 97.877 | 424 | 9 | 0 | 1 | 424 | 1 | 424 | 0.0 | 874 |
| MS.gene045479.t1 | MTR_4g080130 | 88.235 | 425 | 38 | 3 | 1 | 424 | 1 | 414 | 0.0 | 779 |
| MS.gene045479.t1 | MTR_3g110065 | 51.128 | 399 | 193 | 1 | 25 | 421 | 16 | 414 | 1.29e-146 | 423 |
| MS.gene045479.t1 | MTR_3g110065 | 51.128 | 399 | 193 | 1 | 25 | 421 | 56 | 454 | 7.03e-146 | 423 |
| MS.gene045479.t1 | MTR_3g110065 | 51.064 | 376 | 182 | 1 | 25 | 398 | 56 | 431 | 3.54e-137 | 400 |
| MS.gene045479.t1 | MTR_1g013050 | 48.101 | 395 | 203 | 2 | 25 | 417 | 63 | 457 | 1.31e-134 | 394 |
| MS.gene045479.t1 | MTR_4g014910 | 46.269 | 67 | 33 | 1 | 280 | 343 | 5 | 71 | 2.91e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045479.t1 | AT2G30970 | 78.404 | 426 | 90 | 1 | 1 | 424 | 5 | 430 | 0.0 | 716 |
| MS.gene045479.t1 | AT2G30970 | 78.404 | 426 | 90 | 1 | 1 | 424 | 5 | 430 | 0.0 | 716 |
| MS.gene045479.t1 | AT5G11520 | 51.493 | 402 | 193 | 1 | 25 | 424 | 47 | 448 | 2.87e-146 | 424 |
| MS.gene045479.t1 | AT5G19550 | 50.251 | 398 | 196 | 1 | 23 | 418 | 1 | 398 | 3.52e-146 | 422 |
| MS.gene045479.t1 | AT1G62800 | 47.368 | 399 | 210 | 0 | 23 | 421 | 1 | 399 | 8.49e-137 | 398 |
| MS.gene045479.t1 | AT1G62800 | 47.132 | 401 | 210 | 1 | 23 | 421 | 1 | 401 | 3.72e-135 | 394 |
| MS.gene045479.t1 | AT4G31990 | 45.894 | 414 | 221 | 3 | 6 | 417 | 33 | 445 | 1.59e-132 | 389 |
| MS.gene045479.t1 | AT4G31990 | 45.894 | 414 | 221 | 3 | 6 | 417 | 33 | 445 | 1.59e-132 | 389 |
| MS.gene045479.t1 | AT4G31990 | 45.894 | 414 | 221 | 3 | 6 | 417 | 33 | 445 | 2.06e-132 | 389 |
| MS.gene045479.t1 | AT4G31990 | 47.089 | 395 | 207 | 2 | 25 | 417 | 46 | 440 | 2.54e-132 | 388 |
| MS.gene045479.t1 | AT1G62800 | 47.198 | 339 | 177 | 1 | 23 | 359 | 1 | 339 | 2.82e-111 | 330 |
Find 112 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATGATGGTCATTTATT+AGG | 0.163800 | 4.2:+29847554 | MS.gene045479:CDS |
| ACGAGAGAATTTGGAAAATA+TGG | 0.190604 | 4.2:+29848649 | MS.gene045479:CDS |
| GCTGCAGTTCAGGCTTTATC+TGG | 0.203926 | 4.2:+29846670 | MS.gene045479:CDS |
| AACTACACTACGAGAGAATT+TGG | 0.231543 | 4.2:+29848640 | MS.gene045479:CDS |
| ACTCCAACATTAACTTTGTT+TGG | 0.243943 | 4.2:-29844578 | None:intergenic |
| AAATCCAACCCTTTAGATTC+AGG | 0.281836 | 4.2:-29846978 | None:intergenic |
| TGGGAACTGGTATATAGATT+TGG | 0.284181 | 4.2:-29846747 | None:intergenic |
| TGGACTGATGGATGACATTA+AGG | 0.291323 | 4.2:+29847004 | MS.gene045479:CDS |
| AAAACTTGACTCACATGAAT+TGG | 0.295790 | 4.2:-29844980 | None:intergenic |
| GATTCATGTCTTCGTGGTTC+AGG | 0.309930 | 4.2:+29844489 | MS.gene045479:CDS |
| TAGTAACGGTATGTCTTTAT+TGG | 0.320777 | 4.2:-29846951 | None:intergenic |
| AGCCACAACTTCTTCAAGTC+TGG | 0.343190 | 4.2:-29848047 | None:intergenic |
| TACAGCAATCCACCTCTTCA+TGG | 0.366324 | 4.2:+29847993 | MS.gene045479:CDS |
| GAAGCAGAGAGGAGAATTGC+AGG | 0.369047 | 4.2:+29844954 | MS.gene045479:CDS |
| GTCAAACGATCAACCTGTTC+TGG | 0.382951 | 4.2:-29848973 | None:intergenic |
| AATTATAACAGGGCGCATAT+CGG | 0.387711 | 4.2:+29844892 | MS.gene045479:intron |
| TGACTCGTAATGGTCGTATA+AGG | 0.390208 | 4.2:+29849016 | MS.gene045479:CDS |
| ATTACAGCCACCATAACATT+TGG | 0.393881 | 4.2:+29846913 | MS.gene045479:intron |
| GGGAACTGGTATATAGATTT+GGG | 0.398341 | 4.2:-29846746 | None:intergenic |
| CGAGAGAATTTGGAAAATAT+GGG | 0.406108 | 4.2:+29848650 | MS.gene045479:CDS |
| TAAACGAATAGCTGCAGTTC+AGG | 0.408353 | 4.2:+29846660 | MS.gene045479:CDS |
| TCAACGGACAATTTCTCAAC+CGG | 0.420413 | 4.2:+29844447 | MS.gene045479:CDS |
| CATATTTACATGACTCGTAA+TGG | 0.427237 | 4.2:+29849006 | MS.gene045479:CDS |
| CAGCATCTCTCCAAATGTTA+TGG | 0.427253 | 4.2:-29846923 | None:intergenic |
| GACTTGGACCAGGTGGGAAC+TGG | 0.436048 | 4.2:-29846760 | None:intergenic |
| CTTGTCGTTTCAACTGTCCT+TGG | 0.436753 | 4.2:+29848020 | MS.gene045479:CDS |
| CAGTATGGCTGGTCTTAATA+CGG | 0.443084 | 4.2:+29849147 | MS.gene045479:intron |
| GAATCACTGAAGCTGGCATA+TGG | 0.444094 | 4.2:+29846613 | MS.gene045479:CDS |
| ATTATAACAGGGCGCATATC+GGG | 0.453076 | 4.2:+29844893 | MS.gene045479:intron |
| GTTATGGCAGACCGCATCAT+TGG | 0.454392 | 4.2:+29848611 | MS.gene045479:CDS |
| TGGTATATAGATTTGGGTGT+TGG | 0.456286 | 4.2:-29846740 | None:intergenic |
| TATGATTGTTTGCAGGCTAA+AGG | 0.462192 | 4.2:+29847449 | MS.gene045479:intron |
| TGGATTGCTGTACATGGGTC+TGG | 0.465606 | 4.2:-29847982 | None:intergenic |
| TGCATTCAACTGAACCTGAT+TGG | 0.467234 | 4.2:-29848699 | None:intergenic |
| GCTTGTGCTCACAATCCTAC+TGG | 0.469061 | 4.2:+29847301 | MS.gene045479:CDS |
| AATCCAACCCTTTAGATTCA+GGG | 0.470231 | 4.2:-29846977 | None:intergenic |
| TCTCTCCATTGTTCTTCTGA+AGG | 0.474653 | 4.2:-29847331 | None:intergenic |
| CAGCGGGATGACACCAGAAC+AGG | 0.474884 | 4.2:+29848960 | MS.gene045479:CDS |
| GTTCAGGCTTTATCTGGGAC+TGG | 0.478849 | 4.2:+29846676 | MS.gene045479:CDS |
| TACTATCACCCTGAATCTAA+AGG | 0.480649 | 4.2:+29846969 | MS.gene045479:CDS |
| ACTATCACCCTGAATCTAAA+GGG | 0.481415 | 4.2:+29846970 | MS.gene045479:CDS |
| GGTATATAGATTTGGGTGTT+GGG | 0.481546 | 4.2:-29846739 | None:intergenic |
| ACTCCGAGGATTGGATCCTT+AGG | 0.493438 | 4.2:-29844527 | None:intergenic |
| ATGGAATCACATAACCAATC+AGG | 0.493504 | 4.2:+29848685 | MS.gene045479:CDS |
| TAGCTCCGGTGACGGAGCTC+CGG | 0.500615 | 4.2:-29844466 | None:intergenic |
| GCTTCGGTAACTCCGAGGAT+TGG | 0.504812 | 4.2:-29844536 | None:intergenic |
| GAGCAGGGAGTATCTTCCCA+TGG | 0.505060 | 4.2:+29846567 | MS.gene045479:intron |
| CTGATCCGCAAGAAAAGCTT+CGG | 0.505274 | 4.2:-29844552 | None:intergenic |
| ACCTAAGGCATCCAACTCTC+TGG | 0.511639 | 4.2:-29847616 | None:intergenic |
| GAACATCGAACCAGCTCCTA+AGG | 0.511927 | 4.2:+29844511 | MS.gene045479:CDS |
| CTGCAGTTCAGGCTTTATCT+GGG | 0.514039 | 4.2:+29846671 | MS.gene045479:CDS |
| CATGGGTGGAAGCATACATA+TGG | 0.514364 | 4.2:+29846585 | MS.gene045479:CDS |
| TGTTATCATGACAGTATGGC+TGG | 0.514770 | 4.2:+29849136 | MS.gene045479:intron |
| CTCAACCGGAGCTCCGTCAC+CGG | 0.515163 | 4.2:+29844461 | MS.gene045479:CDS |
| CATAACATTTGGAGAGATGC+TGG | 0.515488 | 4.2:+29846924 | MS.gene045479:CDS |
| TACGGGCAACGTTGGATATG+TGG | 0.515504 | 4.2:+29849165 | MS.gene045479:CDS |
| CATATGTATGCTTCCACCCA+TGG | 0.520422 | 4.2:-29846584 | None:intergenic |
| AGGATTGGATCCTTAGGAGC+TGG | 0.523663 | 4.2:-29844521 | None:intergenic |
| TCATTTCCCTTTGTTTGACA+TGG | 0.525399 | 4.2:+29847472 | MS.gene045479:CDS |
| GGTTCAAGAATCACTGAAGC+TGG | 0.525800 | 4.2:+29846606 | MS.gene045479:CDS |
| ATAGAGATGTAAAAGCCATC+AGG | 0.526430 | 4.2:+29847525 | MS.gene045479:CDS |
| GAGCTAGATTCATGTCTTCG+TGG | 0.529355 | 4.2:+29844483 | MS.gene045479:CDS |
| AGTCCAAACAAAGTTAATGT+TGG | 0.529361 | 4.2:+29844575 | MS.gene045479:CDS |
| AGCAGGGAGTATCTTCCCAT+GGG | 0.532326 | 4.2:+29846568 | MS.gene045479:intron |
| AAGAGGTGGATTGCTGTACA+TGG | 0.536615 | 4.2:-29847988 | None:intergenic |
| AGCAGAAAGAAAGAACCGTC+TGG | 0.539208 | 4.2:-29847274 | None:intergenic |
| ATCCAGACTTGAAGAAGTTG+TGG | 0.545968 | 4.2:+29848045 | MS.gene045479:CDS |
| TCACCCTGAATCTAAAGGGT+TGG | 0.547557 | 4.2:+29846974 | MS.gene045479:CDS |
| GAGAAGATTGCGAATCGCCA+TGG | 0.553263 | 4.2:-29844426 | None:intergenic |
| GGACTGTATGGCCAGAGAGT+TGG | 0.555960 | 4.2:+29847605 | MS.gene045479:CDS |
| AGAGATCTCTTCTCAAATGA+AGG | 0.556653 | 4.2:+29847351 | MS.gene045479:CDS |
| TTGGCATGTTCTGCTACAGC+GGG | 0.561910 | 4.2:+29848944 | MS.gene045479:CDS |
| CTAACACATTCAAGAACCAC+AGG | 0.564027 | 4.2:-29844930 | None:intergenic |
| GGTATGCCATGTCAAACAAA+GGG | 0.565688 | 4.2:-29847478 | None:intergenic |
| AGTATGGCTGGTCTTAATAC+GGG | 0.570434 | 4.2:+29849148 | MS.gene045479:intron |
| GCCAGAGAGTTGGATGCCTT+AGG | 0.572080 | 4.2:+29847615 | MS.gene045479:CDS |
| TCTGAAGGATCTACTCCAGT+AGG | 0.572848 | 4.2:-29847316 | None:intergenic |
| GGTCTTAATACGGGCAACGT+TGG | 0.573230 | 4.2:+29849157 | MS.gene045479:CDS |
| TGGTATGCCATGTCAAACAA+AGG | 0.574053 | 4.2:-29847479 | None:intergenic |
| GTTATGTGATTCCATGGCAA+TGG | 0.584912 | 4.2:-29848677 | None:intergenic |
| GCTCCTAAGGATCCAATCCT+CGG | 0.593427 | 4.2:+29844524 | MS.gene045479:CDS |
| TAGATTCAGGGTGATAGTAA+CGG | 0.595480 | 4.2:-29846965 | None:intergenic |
| CATGAATCTAGCTCCGGTGA+CGG | 0.597404 | 4.2:-29844474 | None:intergenic |
| TCTATATACCAGTTCCCACC+TGG | 0.597915 | 4.2:+29846752 | MS.gene045479:CDS |
| ATATGGGGTCTCCATTGCCA+TGG | 0.599296 | 4.2:+29848666 | MS.gene045479:CDS |
| CATCTCTCCAAATGTTATGG+TGG | 0.599838 | 4.2:-29846920 | None:intergenic |
| TGATTGGTTATGTGATTCCA+TGG | 0.602248 | 4.2:-29848683 | None:intergenic |
| CGAAGACATGAATCTAGCTC+CGG | 0.602634 | 4.2:-29844480 | None:intergenic |
| GTTGTGGCTTAAAGAAGTCA+AGG | 0.603954 | 4.2:+29848061 | MS.gene045479:CDS |
| ATTGGCATGTTCTGCTACAG+CGG | 0.606237 | 4.2:+29848943 | MS.gene045479:CDS |
| TAGATCCTTCAGAAGAACAA+TGG | 0.608072 | 4.2:+29847326 | MS.gene045479:CDS |
| ATATGTATGCTTCCACCCAT+GGG | 0.618917 | 4.2:-29846583 | None:intergenic |
| GGCGCATATCGGGATGACAA+TGG | 0.620903 | 4.2:+29844903 | MS.gene045479:CDS |
| ACGACAAGTGCTCCATGAAG+AGG | 0.624499 | 4.2:-29848005 | None:intergenic |
| AGATGATTCTGAGTTCATCA+AGG | 0.634967 | 4.2:+29846636 | MS.gene045479:CDS |
| GAGAGAATTTGGAAAATATG+GGG | 0.638249 | 4.2:+29848651 | MS.gene045479:CDS |
| GATTTCCACTAGCAAAACGT+TGG | 0.643685 | 4.2:-29847499 | None:intergenic |
| ACAAGTGCTCCATGAAGAGG+TGG | 0.644744 | 4.2:-29848002 | None:intergenic |
| GAATACTGACTTGGACCAGG+TGG | 0.647698 | 4.2:-29846767 | None:intergenic |
| TAGTTCTCATTCCAATGATG+CGG | 0.649874 | 4.2:-29848622 | None:intergenic |
| ATTGAATACTGACTTGGACC+AGG | 0.652138 | 4.2:-29846770 | None:intergenic |
| AGGGAGTATCTTCCCATGGG+TGG | 0.652799 | 4.2:+29846571 | MS.gene045479:intron |
| AATACTGACTTGGACCAGGT+GGG | 0.664893 | 4.2:-29846766 | None:intergenic |
| GCGATTCGCAATCTTCTCAA+CGG | 0.664921 | 4.2:+29844431 | MS.gene045479:CDS |
| GGATGACAATGGAAAGCCTG+TGG | 0.668054 | 4.2:+29844914 | MS.gene045479:CDS |
| CGAAAATGAGAAACAAGCCG+TGG | 0.673088 | 4.2:+29847932 | MS.gene045479:CDS |
| CTTACACAGAGTGCTCCAGA+CGG | 0.687623 | 4.2:+29847259 | MS.gene045479:intron |
| GAAAAGCTTCGGTAACTCCG+AGG | 0.698605 | 4.2:-29844541 | None:intergenic |
| AATGTGTTAGAGAAGCAGAG+AGG | 0.730380 | 4.2:+29844943 | MS.gene045479:CDS |
| AGAGGTGGATTGCTGTACAT+GGG | 0.738190 | 4.2:-29847987 | None:intergenic |
| TCTTCAAGTCTGGATCACCA+AGG | 0.760746 | 4.2:-29848037 | None:intergenic |
| TGTGGCTAACGCTATCAACG+AGG | 0.769825 | 4.2:+29849183 | MS.gene045479:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAACTTAATTTCTTA+TGG | + | chr4.2:29846396-29846415 | MS.gene045479:intron | 10.0% |
| !! | TAACAAAAAAAAATATTTGA+AGG | - | chr4.2:29845182-29845201 | None:intergenic | 10.0% |
| !! | TATATTAATATAGAATAACA+TGG | - | chr4.2:29848463-29848482 | None:intergenic | 10.0% |
| !!! | AAATAAATATTTGTTATTTG+TGG | - | chr4.2:29845401-29845420 | None:intergenic | 10.0% |
| !!! | AAATATATAATTTCTACTTT+TGG | + | chr4.2:29845468-29845487 | MS.gene045479:intron | 10.0% |
| !!! | CAAGTTTTTTTTTTTTTTTT+TGG | + | chr4.2:29844995-29845014 | MS.gene045479:intron | 10.0% |
| !!! | TTTTTTCAACTTTATTTAAT+GGG | + | chr4.2:29845541-29845560 | MS.gene045479:intron | 10.0% |
| !! | AATAGTTGTTGTAATAATAA+TGG | + | chr4.2:29845087-29845106 | MS.gene045479:intron | 15.0% |
| !! | TGATTTACTAAATTTAAGAA+TGG | - | chr4.2:29848511-29848530 | None:intergenic | 15.0% |
| !! | TTTCAAAGATAAATATTTGT+GGG | + | chr4.2:29845797-29845816 | MS.gene045479:intron | 15.0% |
| !!! | AAACTTTGAAATATTTCTTT+TGG | - | chr4.2:29845965-29845984 | None:intergenic | 15.0% |
| !!! | GTTTTTTCAACTTTATTTAA+TGG | + | chr4.2:29845540-29845559 | MS.gene045479:intron | 15.0% |
| !!! | TTAATATCATTTTAAAACAG+TGG | - | chr4.2:29846359-29846378 | None:intergenic | 15.0% |
| !!! | TTATACCATAAAGTTTTTTA+GGG | - | chr4.2:29848168-29848187 | None:intergenic | 15.0% |
| !!! | TTTATACCATAAAGTTTTTT+AGG | - | chr4.2:29848169-29848188 | None:intergenic | 15.0% |
| !! | AATAATTAAAGTGAGACTAA+TGG | - | chr4.2:29847195-29847214 | None:intergenic | 20.0% |
| !! | AATATATAAGAAAAAGTCTG+AGG | - | chr4.2:29848368-29848387 | None:intergenic | 20.0% |
| !! | AATGATATGTATGTAAACAT+TGG | + | chr4.2:29847797-29847816 | MS.gene045479:intron | 20.0% |
| !! | ATTACAAGATCAATAATTCT+AGG | - | chr4.2:29846886-29846905 | None:intergenic | 20.0% |
| !! | CAATCATATGCAAAAAATAT+GGG | + | chr4.2:29847584-29847603 | MS.gene045479:CDS | 20.0% |
| !! | CTAATACTAATCAATAAGAA+TGG | - | chr4.2:29847649-29847668 | None:intergenic | 20.0% |
| !! | CTTTAATTAATCTACAAGAA+TGG | + | chr4.2:29846267-29846286 | MS.gene045479:intron | 20.0% |
| !! | GCAAACCAATAAAAATTTAA+GGG | - | chr4.2:29845831-29845850 | None:intergenic | 20.0% |
| !! | GTTTCAAAGATAAATATTTG+TGG | + | chr4.2:29845796-29845815 | MS.gene045479:intron | 20.0% |
| !! | TAAGAAATAACCAATTTAAG+AGG | - | chr4.2:29847243-29847262 | None:intergenic | 20.0% |
| !! | TCAATCATATGCAAAAAATA+TGG | + | chr4.2:29847583-29847602 | MS.gene045479:CDS | 20.0% |
| !! | TGGATGAATTTCATTTATTA+TGG | - | chr4.2:29848325-29848344 | None:intergenic | 20.0% |
| !! | TGTCTTCTTAAATTATCATT+TGG | - | chr4.2:29848488-29848507 | None:intergenic | 20.0% |
| !! | TTCAAAGATAAATATTTGTG+GGG | + | chr4.2:29845798-29845817 | MS.gene045479:intron | 20.0% |
| !!! | AGTAATTTGTTTCTTTCTTT+AGG | + | chr4.2:29845723-29845742 | MS.gene045479:intron | 20.0% |
| !!! | CATTCTTATTGATTAGTATT+AGG | + | chr4.2:29847647-29847666 | MS.gene045479:intron | 20.0% |
| !!! | TCTCACTTTTAGAAATATTT+TGG | - | chr4.2:29846056-29846075 | None:intergenic | 20.0% |
| !!! | TTAATGCTAACATTGATTTT+AGG | + | chr4.2:29845018-29845037 | MS.gene045479:intron | 20.0% |
| !!! | TTGATTTGCAAATTATAACA+GGG | + | chr4.2:29844882-29844901 | MS.gene045479:intron | 20.0% |
| !!! | TTTGATTTGCAAATTATAAC+AGG | + | chr4.2:29844881-29844900 | MS.gene045479:intron | 20.0% |
| !!! | TTTTTCCCTAAAAAACTTTA+TGG | + | chr4.2:29848160-29848179 | MS.gene045479:intron | 20.0% |
| ! | AAATCAATGGCAGTATTTAA+AGG | - | chr4.2:29846805-29846824 | None:intergenic | 25.0% |
| ! | AACCATAAAAATAAGAGAGA+AGG | - | chr4.2:29848789-29848808 | None:intergenic | 25.0% |
| ! | AACTCATAGTATAAGAGAAA+TGG | - | chr4.2:29849076-29849095 | None:intergenic | 25.0% |
| ! | ACCATAAAAATAAGAGAGAA+GGG | - | chr4.2:29848788-29848807 | None:intergenic | 25.0% |
| ! | AGAAAATGAACTTACATAGA+TGG | + | chr4.2:29848577-29848596 | MS.gene045479:intron | 25.0% |
| ! | AGCATCTAACTTTAGTTAAA+AGG | + | chr4.2:29845311-29845330 | MS.gene045479:intron | 25.0% |
| ! | ATTTGTGGAATTCTTAACAT+TGG | - | chr4.2:29845386-29845405 | None:intergenic | 25.0% |
| ! | CAATAAAAATTTAAGGGATG+CGG | - | chr4.2:29845825-29845844 | None:intergenic | 25.0% |
| ! | CAATGCTCAATTAACATAAT+TGG | + | chr4.2:29848403-29848422 | MS.gene045479:intron | 25.0% |
| ! | CATGTTAAAAGATAGAGTTA+TGG | - | chr4.2:29847744-29847763 | None:intergenic | 25.0% |
| ! | CGCAAACCAATAAAAATTTA+AGG | - | chr4.2:29845832-29845851 | None:intergenic | 25.0% |
| ! | CTTTCTGTTAGAAAAAAGTA+CGG | + | chr4.2:29846014-29846033 | MS.gene045479:intron | 25.0% |
| ! | TATATGTTATCATGACAGTA+TGG | + | chr4.2:29849132-29849151 | MS.gene045479:intron | 25.0% |
| ! | TTTGATATTTCGTAGATATC+TGG | + | chr4.2:29846860-29846879 | MS.gene045479:intron | 25.0% |
| !! | AAAAGTACGGATAATTAATC+AGG | + | chr4.2:29846027-29846046 | MS.gene045479:intron | 25.0% |
| !! | CAAAGTGTTAAAAACTTAGT+TGG | + | chr4.2:29848882-29848901 | MS.gene045479:intron | 25.0% |
| !! | TTTCTTTCTTTAGGTGTTTT+GGG | + | chr4.2:29845732-29845751 | MS.gene045479:intron | 25.0% |
| !!! | CTCTTATTTTTATGGTTACT+TGG | + | chr4.2:29848792-29848811 | MS.gene045479:intron | 25.0% |
| !!! | TAATTGGTTTTGTAGAATGT+GGG | + | chr4.2:29845923-29845942 | MS.gene045479:intron | 25.0% |
| !!! | TTTTTTAGGGAAAAAAGCAA+AGG | - | chr4.2:29848155-29848174 | None:intergenic | 25.0% |
| AAAACTTGACTCACATGAAT+TGG | - | chr4.2:29844983-29845002 | None:intergenic | 30.0% | |
| AATGAAATTCATCCAATCCT+AGG | + | chr4.2:29848330-29848349 | MS.gene045479:intron | 30.0% | |
| ACATTGGACAAATGTTAACA+TGG | - | chr4.2:29845370-29845389 | None:intergenic | 30.0% | |
| ACGAGAGAATTTGGAAAATA+TGG | + | chr4.2:29848649-29848668 | MS.gene045479:CDS | 30.0% | |
| ACTCCAACATTAACTTTGTT+TGG | - | chr4.2:29844581-29844600 | None:intergenic | 30.0% | |
| ACTCTTCTTACCTCTTAAAT+TGG | + | chr4.2:29847230-29847249 | MS.gene045479:intron | 30.0% | |
| AGTCATAAGTGTTATCTTTG+CGG | - | chr4.2:29847888-29847907 | None:intergenic | 30.0% | |
| AGTCCAAACAAAGTTAATGT+TGG | + | chr4.2:29844575-29844594 | MS.gene045479:CDS | 30.0% | |
| ATCATCAACAAAAATCCTGA+TGG | - | chr4.2:29847543-29847562 | None:intergenic | 30.0% | |
| ATGACCGAAATTCATAGTAA+CGG | + | chr4.2:29845898-29845917 | MS.gene045479:intron | 30.0% | |
| CATATTTACATGACTCGTAA+TGG | + | chr4.2:29849006-29849025 | MS.gene045479:CDS | 30.0% | |
| CCATAAAAATAAGAGAGAAG+GGG | - | chr4.2:29848787-29848806 | None:intergenic | 30.0% | |
| CGAGAGAATTTGGAAAATAT+GGG | + | chr4.2:29848650-29848669 | MS.gene045479:CDS | 30.0% | |
| CGTACATAGAAACTTTAGTT+GGG | + | chr4.2:29845288-29845307 | MS.gene045479:intron | 30.0% | |
| GAGAGAATTTGGAAAATATG+GGG | + | chr4.2:29848651-29848670 | MS.gene045479:CDS | 30.0% | |
| GCACAGAAAATAAGAAAAAG+TGG | - | chr4.2:29848736-29848755 | None:intergenic | 30.0% | |
| GCAGTATTTAAAGGAAGATT+TGG | - | chr4.2:29846796-29846815 | None:intergenic | 30.0% | |
| GCATACTGCAGAATTATATA+TGG | - | chr4.2:29848194-29848213 | None:intergenic | 30.0% | |
| GTAGTGTAAAAAACTGTTTC+AGG | - | chr4.2:29846501-29846520 | None:intergenic | 30.0% | |
| TACTCCGTTACTATGAATTT+CGG | - | chr4.2:29845905-29845924 | None:intergenic | 30.0% | |
| TAGTAACGGTATGTCTTTAT+TGG | - | chr4.2:29846954-29846973 | None:intergenic | 30.0% | |
| TCTAAAAGTGAGAAGAAAAC+TGG | + | chr4.2:29846063-29846082 | MS.gene045479:intron | 30.0% | |
| TCTCTTATACTATGAGTTCT+TGG | + | chr4.2:29849078-29849097 | MS.gene045479:intron | 30.0% | |
| TCTTCTCAAATGAAGGTTAA+AGG | + | chr4.2:29847358-29847377 | MS.gene045479:intron | 30.0% | |
| TTACAGCTTATAGCACAAAT+AGG | + | chr4.2:29846108-29846127 | MS.gene045479:intron | 30.0% | |
| TTCTGTAGACTCAAAATCAA+TGG | - | chr4.2:29846818-29846837 | None:intergenic | 30.0% | |
| TTTCAGGAGAATGTTACTAA+GGG | - | chr4.2:29846485-29846504 | None:intergenic | 30.0% | |
| ! | ATTCATAGTAACGGAGTAAT+TGG | + | chr4.2:29845907-29845926 | MS.gene045479:intron | 30.0% |
| ! | ATTTGGATTGAATACTGACT+TGG | - | chr4.2:29846779-29846798 | None:intergenic | 30.0% |
| ! | CGCATCCCTTAAATTTTTAT+TGG | + | chr4.2:29845823-29845842 | MS.gene045479:intron | 30.0% |
| ! | GTTTCTTTCTTTAGGTGTTT+TGG | + | chr4.2:29845731-29845750 | MS.gene045479:intron | 30.0% |
| ! | TTTAAAACAGTGGCGATAAA+AGG | - | chr4.2:29846349-29846368 | None:intergenic | 30.0% |
| !! | ATCAGGATTTTTGTTGATGA+TGG | + | chr4.2:29847542-29847561 | MS.gene045479:CDS | 30.0% |
| !! | GTTGATGATGGTCATTTATT+AGG | + | chr4.2:29847554-29847573 | MS.gene045479:CDS | 30.0% |
| !!! | AGTATGCTATTTTTCTAAGG+TGG | + | chr4.2:29848207-29848226 | MS.gene045479:intron | 30.0% |
| !!! | CGTACTTTTTTCTAACAGAA+AGG | - | chr4.2:29846016-29846035 | None:intergenic | 30.0% |
| !!! | GTAATTGGTTTTGTAGAATG+TGG | + | chr4.2:29845922-29845941 | MS.gene045479:intron | 30.0% |
| !!! | TGCAGTATGCTATTTTTCTA+AGG | + | chr4.2:29848204-29848223 | MS.gene045479:intron | 30.0% |
| !!! | TTTCATGTGCCATTTTTTTG+TGG | + | chr4.2:29845575-29845594 | MS.gene045479:intron | 30.0% |
| AAAAGCAGCAGCAATAAAAC+AGG | - | chr4.2:29845772-29845791 | None:intergenic | 35.0% | |
| AAATCCAACCCTTTAGATTC+AGG | - | chr4.2:29846981-29847000 | None:intergenic | 35.0% | |
| AACTACACTACGAGAGAATT+TGG | + | chr4.2:29848640-29848659 | MS.gene045479:CDS | 35.0% | |
| AAGAAGATGCTTAGTAGGTT+AGG | + | chr4.2:29845869-29845888 | MS.gene045479:intron | 35.0% | |
| AAGAATGGTATGAGATTGGA+CGG | + | chr4.2:29846282-29846301 | MS.gene045479:intron | 35.0% | |
| AAGAATGGTCTACTTACCTA+AGG | - | chr4.2:29847634-29847653 | None:intergenic | 35.0% | |
| AATCCAACCCTTTAGATTCA+GGG | - | chr4.2:29846980-29846999 | None:intergenic | 35.0% | |
| AATTATAACAGGGCGCATAT+CGG | + | chr4.2:29844892-29844911 | MS.gene045479:intron | 35.0% | |
| ACGGTTAAGATCAATTACTG+CGG | + | chr4.2:29846301-29846320 | MS.gene045479:intron | 35.0% | |
| ACGTGATCACCACAAAAAAA+TGG | - | chr4.2:29845587-29845606 | None:intergenic | 35.0% | |
| ACTATCACCCTGAATCTAAA+GGG | + | chr4.2:29846970-29846989 | MS.gene045479:CDS | 35.0% | |
| AGAGATCTCTTCTCAAATGA+AGG | + | chr4.2:29847351-29847370 | MS.gene045479:CDS | 35.0% | |
| AGATGATTCTGAGTTCATCA+AGG | + | chr4.2:29846636-29846655 | MS.gene045479:CDS | 35.0% | |
| AGTTTGACATTGTAACCTCT+AGG | + | chr4.2:29847130-29847149 | MS.gene045479:intron | 35.0% | |
| ATACTATGAGTTCTTGGAGA+TGG | + | chr4.2:29849084-29849103 | MS.gene045479:intron | 35.0% | |
| ATAGAGATGTAAAAGCCATC+AGG | + | chr4.2:29847525-29847544 | MS.gene045479:CDS | 35.0% | |
| ATGCTTAGTAGGTTAGGTAT+TGG | + | chr4.2:29845875-29845894 | MS.gene045479:intron | 35.0% | |
| ATGGAATCACATAACCAATC+AGG | + | chr4.2:29848685-29848704 | MS.gene045479:CDS | 35.0% | |
| ATTACAGCCACCATAACATT+TGG | + | chr4.2:29846913-29846932 | MS.gene045479:intron | 35.0% | |
| CTACAAGAATGGTATGAGAT+TGG | + | chr4.2:29846278-29846297 | MS.gene045479:intron | 35.0% | |
| CTAGAAAGAAGATGCTTAGT+AGG | + | chr4.2:29845864-29845883 | MS.gene045479:intron | 35.0% | |
| CTGTTAATCATTAGTGACTG+AGG | + | chr4.2:29848258-29848277 | MS.gene045479:intron | 35.0% | |
| CTGTTACTATTTGTGCAGAT+TGG | + | chr4.2:29848925-29848944 | MS.gene045479:intron | 35.0% | |
| GAGTCATGTATAAAGTGTGT+CGG | - | chr4.2:29847057-29847076 | None:intergenic | 35.0% | |
| GCAAAAAATATGGGACTGTA+TGG | + | chr4.2:29847593-29847612 | MS.gene045479:CDS | 35.0% | |
| GCATGAATAAGTTGTAGCAA+CGG | + | chr4.2:29848552-29848571 | MS.gene045479:intron | 35.0% | |
| GCGTACATAGAAACTTTAGT+TGG | + | chr4.2:29845287-29845306 | MS.gene045479:intron | 35.0% | |
| GGGAACTGGTATATAGATTT+GGG | - | chr4.2:29846749-29846768 | None:intergenic | 35.0% | |
| GGTATATAGATTTGGGTGTT+GGG | - | chr4.2:29846742-29846761 | None:intergenic | 35.0% | |
| GTTTCAGGAGAATGTTACTA+AGG | - | chr4.2:29846486-29846505 | None:intergenic | 35.0% | |
| GTTTGACATTGTAACCTCTA+GGG | + | chr4.2:29847131-29847150 | MS.gene045479:intron | 35.0% | |
| TACATAGATGGCTTCTTTAC+AGG | + | chr4.2:29848589-29848608 | MS.gene045479:intron | 35.0% | |
| TACTATCACCCTGAATCTAA+AGG | + | chr4.2:29846969-29846988 | MS.gene045479:CDS | 35.0% | |
| TACTATGAGTTCTTGGAGAT+GGG | + | chr4.2:29849085-29849104 | MS.gene045479:intron | 35.0% | |
| TAGATCCTTCAGAAGAACAA+TGG | + | chr4.2:29847326-29847345 | MS.gene045479:CDS | 35.0% | |
| TAGATTCAGGGTGATAGTAA+CGG | - | chr4.2:29846968-29846987 | None:intergenic | 35.0% | |
| TAGTTCTCATTCCAATGATG+CGG | - | chr4.2:29848625-29848644 | None:intergenic | 35.0% | |
| TATGATTGTTTGCAGGCTAA+AGG | + | chr4.2:29847449-29847468 | MS.gene045479:intron | 35.0% | |
| TCAAAAAGTAAGCCTAGGAT+TGG | - | chr4.2:29848345-29848364 | None:intergenic | 35.0% | |
| TCATTGCTATGATTGTTTGC+AGG | + | chr4.2:29847442-29847461 | MS.gene045479:intron | 35.0% | |
| TGGGAACTGGTATATAGATT+TGG | - | chr4.2:29846750-29846769 | None:intergenic | 35.0% | |
| TGGTATATAGATTTGGGTGT+TGG | - | chr4.2:29846743-29846762 | None:intergenic | 35.0% | |
| TTAGTATTAGGCCAAAGAGT+TGG | + | chr4.2:29847659-29847678 | MS.gene045479:intron | 35.0% | |
| ! | ACTTTTGGTATACCAACATG+TGG | + | chr4.2:29845483-29845502 | MS.gene045479:intron | 35.0% |
| ! | ATGGCTTTTACATCTCTATC+TGG | - | chr4.2:29847524-29847543 | None:intergenic | 35.0% |
| ! | ATTTTACAACCGTCTTTGAC+GGG | - | chr4.2:29847170-29847189 | None:intergenic | 35.0% |
| ! | CATTTTACAACCGTCTTTGA+CGG | - | chr4.2:29847171-29847190 | None:intergenic | 35.0% |
| ! | GGGGAGTAAAACTTTTATAG+AGG | - | chr4.2:29848121-29848140 | None:intergenic | 35.0% |
| ! | TCATTTCCCTTTGTTTGACA+TGG | + | chr4.2:29847472-29847491 | MS.gene045479:CDS | 35.0% |
| ! | TCTAAAGGGTTGGATTTTTC+TGG | + | chr4.2:29846984-29847003 | MS.gene045479:CDS | 35.0% |
| ! | TGATTGGTTATGTGATTCCA+TGG | - | chr4.2:29848686-29848705 | None:intergenic | 35.0% |
| !! | CAATTGACTTTTTACAGCCA+CGG | - | chr4.2:29847952-29847971 | None:intergenic | 35.0% |
| !! | CATCTTCTTTCTAGCTAGTT+TGG | - | chr4.2:29845858-29845877 | None:intergenic | 35.0% |
| !! | CTATCTACTTTTGGTCTATG+AGG | + | chr4.2:29847089-29847108 | MS.gene045479:intron | 35.0% |
| !! | GCTGTGTTACTATCTACTTT+TGG | + | chr4.2:29847080-29847099 | MS.gene045479:intron | 35.0% |
| !! | TATTAGAAGCTTGTTGACCA+AGG | - | chr4.2:29846458-29846477 | None:intergenic | 35.0% |
| !!! | AGTTTGCTTTTTTGGTACGT+TGG | + | chr4.2:29845620-29845639 | MS.gene045479:intron | 35.0% |
| !!! | CCCCTTCTCTCTTATTTTTA+TGG | + | chr4.2:29848784-29848803 | MS.gene045479:intron | 35.0% |
| !!! | GCTATTTTTCTAAGGTGGAA+TGG | + | chr4.2:29848212-29848231 | MS.gene045479:intron | 35.0% |
| AAAAAAGCAAACTCAGCTGG+TGG | - | chr4.2:29845613-29845632 | None:intergenic | 40.0% | |
| AAAAAAGCAAAGGCTGTGAG+AGG | - | chr4.2:29848145-29848164 | None:intergenic | 40.0% | |
| AAGTTCTGTAAACCAGCTCA+AGG | - | chr4.2:29847841-29847860 | None:intergenic | 40.0% | |
| AATGTGTTAGAGAAGCAGAG+AGG | + | chr4.2:29844943-29844962 | MS.gene045479:CDS | 40.0% | |
| ACCAAAAAAGCAAACTCAGC+TGG | - | chr4.2:29845616-29845635 | None:intergenic | 40.0% | |
| ACCGTTTCAAATGTTTGAGC+AGG | + | chr4.2:29846551-29846570 | MS.gene045479:intron | 40.0% | |
| AGAACACTGCAACAACAAGT+AGG | - | chr4.2:29845659-29845678 | None:intergenic | 40.0% | |
| AGTAGTTCCAACCAACTCTT+TGG | - | chr4.2:29847673-29847692 | None:intergenic | 40.0% | |
| ATATGTATGCTTCCACCCAT+GGG | - | chr4.2:29846586-29846605 | None:intergenic | 40.0% | |
| ATCATTAGTGACTGAGGCTA+TGG | + | chr4.2:29848264-29848283 | MS.gene045479:intron | 40.0% | |
| ATCCAGACTTGAAGAAGTTG+TGG | + | chr4.2:29848045-29848064 | MS.gene045479:CDS | 40.0% | |
| ATTATAACAGGGCGCATATC+GGG | + | chr4.2:29844893-29844912 | MS.gene045479:intron | 40.0% | |
| CAGCATCTCTCCAAATGTTA+TGG | - | chr4.2:29846926-29846945 | None:intergenic | 40.0% | |
| CATAACATTTGGAGAGATGC+TGG | + | chr4.2:29846924-29846943 | MS.gene045479:CDS | 40.0% | |
| CATCTCTCCAAATGTTATGG+TGG | - | chr4.2:29846923-29846942 | None:intergenic | 40.0% | |
| CCCTGCTCAAACATTTGAAA+CGG | - | chr4.2:29846555-29846574 | None:intergenic | 40.0% | |
| CCGTTTCAAATGTTTGAGCA+GGG | + | chr4.2:29846552-29846571 | MS.gene045479:intron | 40.0% | |
| CTAACACATTCAAGAACCAC+AGG | - | chr4.2:29844933-29844952 | None:intergenic | 40.0% | |
| GATGGCTTCTTTACAGGTTA+TGG | + | chr4.2:29848595-29848614 | MS.gene045479:intron | 40.0% | |
| GATTTCCACTAGCAAAACGT+TGG | - | chr4.2:29847502-29847521 | None:intergenic | 40.0% | |
| GGTATGCCATGTCAAACAAA+GGG | - | chr4.2:29847481-29847500 | None:intergenic | 40.0% | |
| GTGCTTATTGTAGTTGCTTG+AGG | + | chr4.2:29848752-29848771 | MS.gene045479:intron | 40.0% | |
| GTTAACTTAACGCCACATGT+TGG | - | chr4.2:29845498-29845517 | None:intergenic | 40.0% | |
| GTTATGTGATTCCATGGCAA+TGG | - | chr4.2:29848680-29848699 | None:intergenic | 40.0% | |
| GTTGTGGCTTAAAGAAGTCA+AGG | + | chr4.2:29848061-29848080 | MS.gene045479:CDS | 40.0% | |
| TAAACGAATAGCTGCAGTTC+AGG | + | chr4.2:29846660-29846679 | MS.gene045479:CDS | 40.0% | |
| TACTTGGAGACCAAGTATCT+TGG | + | chr4.2:29848808-29848827 | MS.gene045479:intron | 40.0% | |
| TCAACGGACAATTTCTCAAC+CGG | + | chr4.2:29844447-29844466 | MS.gene045479:CDS | 40.0% | |
| TCTATGTACGCACGAGATAA+AGG | - | chr4.2:29845278-29845297 | None:intergenic | 40.0% | |
| TCTCTCCATTGTTCTTCTGA+AGG | - | chr4.2:29847334-29847353 | None:intergenic | 40.0% | |
| TGACTCGTAATGGTCGTATA+AGG | + | chr4.2:29849016-29849035 | MS.gene045479:CDS | 40.0% | |
| TGAGGTCAAAAAGTAAGCCT+AGG | - | chr4.2:29848350-29848369 | None:intergenic | 40.0% | |
| TGCATTCAACTGAACCTGAT+TGG | - | chr4.2:29848702-29848721 | None:intergenic | 40.0% | |
| TGCGGCACATATTTAATGCT+CGG | + | chr4.2:29846319-29846338 | MS.gene045479:intron | 40.0% | |
| TGGTATGCCATGTCAAACAA+AGG | - | chr4.2:29847482-29847501 | None:intergenic | 40.0% | |
| TGTTATCATGACAGTATGGC+TGG | + | chr4.2:29849136-29849155 | MS.gene045479:intron | 40.0% | |
| TTGTAGAATGTGGGACTTGT+TGG | + | chr4.2:29845932-29845951 | MS.gene045479:intron | 40.0% | |
| ! | AGAACAGTGTTGCTCTGTTA+TGG | - | chr4.2:29844720-29844739 | None:intergenic | 40.0% |
| ! | AGTTACCGAAGCTTTTCTTG+CGG | + | chr4.2:29844547-29844566 | MS.gene045479:CDS | 40.0% |
| ! | GAGAAGAAAACTGGTCTGTT+TGG | + | chr4.2:29846072-29846091 | MS.gene045479:intron | 40.0% |
| ! | GTTGGATTTTTCTGGACTGA+TGG | + | chr4.2:29846992-29847011 | MS.gene045479:CDS | 40.0% |
| ! | TATTAGGCCAAAGAGTTGGT+TGG | + | chr4.2:29847663-29847682 | MS.gene045479:intron | 40.0% |
| ! | TGAGCTGGTTTACAGAACTT+TGG | + | chr4.2:29847841-29847860 | MS.gene045479:intron | 40.0% |
| ! | TGGACTGATGGATGACATTA+AGG | + | chr4.2:29847004-29847023 | MS.gene045479:CDS | 40.0% |
| ! | TTTTCGCAAAGTAAGCTGCA+AGG | - | chr4.2:29847918-29847937 | None:intergenic | 40.0% |
| !! | AGTATGGCTGGTCTTAATAC+GGG | + | chr4.2:29849148-29849167 | MS.gene045479:intron | 40.0% |
| !! | ATTGAATACTGACTTGGACC+AGG | - | chr4.2:29846773-29846792 | None:intergenic | 40.0% |
| !! | CAGTATGGCTGGTCTTAATA+CGG | + | chr4.2:29849147-29849166 | MS.gene045479:intron | 40.0% |
| !! | TTTAGTTTGAAGCCTTGAGC+TGG | + | chr4.2:29847826-29847845 | MS.gene045479:intron | 40.0% |
| !!! | ACCAGCTGAGTTTGCTTTTT+TGG | + | chr4.2:29845612-29845631 | MS.gene045479:intron | 40.0% |
| !!! | AGGTGTTTTGGGATGATGTA+GGG | + | chr4.2:29845743-29845762 | MS.gene045479:intron | 40.0% |
| !!! | TAGGTGTTTTGGGATGATGT+AGG | + | chr4.2:29845742-29845761 | MS.gene045479:intron | 40.0% |
| AAGTATCTTGGTAGGGGAGA+GGG | + | chr4.2:29848820-29848839 | MS.gene045479:intron | 45.0% | |
| AGCAGAAAGAAAGAACCGTC+TGG | - | chr4.2:29847277-29847296 | None:intergenic | 45.0% | |
| AGCCACAACTTCTTCAAGTC+TGG | - | chr4.2:29848050-29848069 | None:intergenic | 45.0% | |
| AGGTCAAATCCCGTCAAAGA+CGG | + | chr4.2:29847158-29847177 | MS.gene045479:intron | 45.0% | |
| ATTGGCATGTTCTGCTACAG+CGG | + | chr4.2:29848943-29848962 | MS.gene045479:CDS | 45.0% | |
| CAAGGTAGGTCTGAATCTGA+TGG | - | chr4.2:29846440-29846459 | None:intergenic | 45.0% | |
| CATATGTATGCTTCCACCCA+TGG | - | chr4.2:29846587-29846606 | None:intergenic | 45.0% | |
| CATCAGATTCAGACCTACCT+TGG | + | chr4.2:29846438-29846457 | MS.gene045479:intron | 45.0% | |
| CGAAAATGAGAAACAAGCCG+TGG | + | chr4.2:29847932-29847951 | MS.gene045479:CDS | 45.0% | |
| CTGATCCGCAAGAAAAGCTT+CGG | - | chr4.2:29844555-29844574 | None:intergenic | 45.0% | |
| GAATCACTGAAGCTGGCATA+TGG | + | chr4.2:29846613-29846632 | MS.gene045479:CDS | 45.0% | |
| GAGACCAAGTATCTTGGTAG+GGG | + | chr4.2:29848814-29848833 | MS.gene045479:intron | 45.0% | |
| GAGCTAGATTCATGTCTTCG+TGG | + | chr4.2:29844483-29844502 | MS.gene045479:CDS | 45.0% | |
| GATTCATGTCTTCGTGGTTC+AGG | + | chr4.2:29844489-29844508 | MS.gene045479:CDS | 45.0% | |
| GCGATTCGCAATCTTCTCAA+CGG | + | chr4.2:29844431-29844450 | MS.gene045479:CDS | 45.0% | |
| GGAGACCAAGTATCTTGGTA+GGG | + | chr4.2:29848813-29848832 | MS.gene045479:intron | 45.0% | |
| GGTTCAAGAATCACTGAAGC+TGG | + | chr4.2:29846606-29846625 | MS.gene045479:CDS | 45.0% | |
| GTCAAACGATCAACCTGTTC+TGG | - | chr4.2:29848976-29848995 | None:intergenic | 45.0% | |
| TACAGCAATCCACCTCTTCA+TGG | + | chr4.2:29847993-29848012 | MS.gene045479:CDS | 45.0% | |
| TCACCCTGAATCTAAAGGGT+TGG | + | chr4.2:29846974-29846993 | MS.gene045479:CDS | 45.0% | |
| TCATGATTCCTTGCTCTGTG+TGG | + | chr4.2:29845697-29845716 | MS.gene045479:intron | 45.0% | |
| TCTATATACCAGTTCCCACC+TGG | + | chr4.2:29846752-29846771 | MS.gene045479:CDS | 45.0% | |
| TCTGAAGGATCTACTCCAGT+AGG | - | chr4.2:29847319-29847338 | None:intergenic | 45.0% | |
| TCTTCAAGTCTGGATCACCA+AGG | - | chr4.2:29848040-29848059 | None:intergenic | 45.0% | |
| TGGAGACCAAGTATCTTGGT+AGG | + | chr4.2:29848812-29848831 | MS.gene045479:intron | 45.0% | |
| TTACTACACCACACAGAGCA+AGG | - | chr4.2:29845708-29845727 | None:intergenic | 45.0% | |
| ! | ATTGTAACCTCTAGGGACGA+AGG | + | chr4.2:29847138-29847157 | MS.gene045479:intron | 45.0% |
| ! | CATGGGTGGAAGCATACATA+TGG | + | chr4.2:29846585-29846604 | MS.gene045479:CDS | 45.0% |
| ! | CGAAGACATGAATCTAGCTC+CGG | - | chr4.2:29844483-29844502 | None:intergenic | 45.0% |
| ! | CTGCAGTTCAGGCTTTATCT+GGG | + | chr4.2:29846671-29846690 | MS.gene045479:CDS | 45.0% |
| ! | CTTGTCGTTTCAACTGTCCT+TGG | + | chr4.2:29848020-29848039 | MS.gene045479:CDS | 45.0% |
| ! | GCATACCAACGTTTTGCTAG+TGG | + | chr4.2:29847494-29847513 | MS.gene045479:CDS | 45.0% |
| !! | AAGAGGTGGATTGCTGTACA+TGG | - | chr4.2:29847991-29848010 | None:intergenic | 45.0% |
| !! | AATACTGACTTGGACCAGGT+GGG | - | chr4.2:29846769-29846788 | None:intergenic | 45.0% |
| !! | AGAAGCTTGTTGACCAAGGT+AGG | - | chr4.2:29846454-29846473 | None:intergenic | 45.0% |
| !! | AGAGGTGGATTGCTGTACAT+GGG | - | chr4.2:29847990-29848009 | None:intergenic | 45.0% |
| AAAGCAAAGGCTGTGAGAGG+TGG | - | chr4.2:29848142-29848161 | None:intergenic | 50.0% | |
| AAGCAAAGGCTGTGAGAGGT+GGG | - | chr4.2:29848141-29848160 | None:intergenic | 50.0% | |
| ACAAGTGCTCCATGAAGAGG+TGG | - | chr4.2:29848005-29848024 | None:intergenic | 50.0% | |
| ACGACAAGTGCTCCATGAAG+AGG | - | chr4.2:29848008-29848027 | None:intergenic | 50.0% | |
| ACTCCGAGGATTGGATCCTT+AGG | - | chr4.2:29844530-29844549 | None:intergenic | 50.0% | |
| AGGATTGGATCCTTAGGAGC+TGG | - | chr4.2:29844524-29844543 | None:intergenic | 50.0% | |
| ATATGGGGTCTCCATTGCCA+TGG | + | chr4.2:29848666-29848685 | MS.gene045479:CDS | 50.0% | |
| CAAGTATCTTGGTAGGGGAG+AGG | + | chr4.2:29848819-29848838 | MS.gene045479:intron | 50.0% | |
| CTCTCCCCTACCAAGATACT+TGG | - | chr4.2:29848821-29848840 | None:intergenic | 50.0% | |
| GAAAAGCTTCGGTAACTCCG+AGG | - | chr4.2:29844544-29844563 | None:intergenic | 50.0% | |
| GAACATCGAACCAGCTCCTA+AGG | + | chr4.2:29844511-29844530 | MS.gene045479:CDS | 50.0% | |
| GAAGCAGAGAGGAGAATTGC+AGG | + | chr4.2:29844954-29844973 | MS.gene045479:CDS | 50.0% | |
| GATTTGACCTTCGTCCCTAG+AGG | - | chr4.2:29847148-29847167 | None:intergenic | 50.0% | |
| GCTCCTAAGGATCCAATCCT+CGG | + | chr4.2:29844524-29844543 | MS.gene045479:CDS | 50.0% | |
| GCTTGTGCTCACAATCCTAC+TGG | + | chr4.2:29847301-29847320 | MS.gene045479:CDS | 50.0% | |
| GGATGACAATGGAAAGCCTG+TGG | + | chr4.2:29844914-29844933 | MS.gene045479:CDS | 50.0% | |
| GGTCTTAATACGGGCAACGT+TGG | + | chr4.2:29849157-29849176 | MS.gene045479:CDS | 50.0% | |
| GTTATGGCAGACCGCATCAT+TGG | + | chr4.2:29848611-29848630 | MS.gene045479:CDS | 50.0% | |
| TACGGGCAACGTTGGATATG+TGG | + | chr4.2:29849165-29849184 | MS.gene045479:CDS | 50.0% | |
| TGGATTGCTGTACATGGGTC+TGG | - | chr4.2:29847985-29848004 | None:intergenic | 50.0% | |
| TGTGGCTAACGCTATCAACG+AGG | + | chr4.2:29849183-29849202 | MS.gene045479:CDS | 50.0% | |
| TTGGCATGTTCTGCTACAGC+GGG | + | chr4.2:29848944-29848963 | MS.gene045479:CDS | 50.0% | |
| ! | ACCTAAGGCATCCAACTCTC+TGG | - | chr4.2:29847619-29847638 | None:intergenic | 50.0% |
| ! | CATGAATCTAGCTCCGGTGA+CGG | - | chr4.2:29844477-29844496 | None:intergenic | 50.0% |
| ! | CTTACACAGAGTGCTCCAGA+CGG | + | chr4.2:29847259-29847278 | MS.gene045479:intron | 50.0% |
| ! | GCTGCAGTTCAGGCTTTATC+TGG | + | chr4.2:29846670-29846689 | MS.gene045479:CDS | 50.0% |
| ! | GTTCAGGCTTTATCTGGGAC+TGG | + | chr4.2:29846676-29846695 | MS.gene045479:CDS | 50.0% |
| !! | AGCAGGGAGTATCTTCCCAT+GGG | + | chr4.2:29846568-29846587 | MS.gene045479:intron | 50.0% |
| !! | GAATACTGACTTGGACCAGG+TGG | - | chr4.2:29846770-29846789 | None:intergenic | 50.0% |
| AGCAAAGGCTGTGAGAGGTG+GGG | - | chr4.2:29848140-29848159 | None:intergenic | 55.0% | |
| GCCAGAGAGTTGGATGCCTT+AGG | + | chr4.2:29847615-29847634 | MS.gene045479:CDS | 55.0% | |
| GCTTCGGTAACTCCGAGGAT+TGG | - | chr4.2:29844539-29844558 | None:intergenic | 55.0% | |
| GGACTGTATGGCCAGAGAGT+TGG | + | chr4.2:29847605-29847624 | MS.gene045479:CDS | 55.0% | |
| GGCGCATATCGGGATGACAA+TGG | + | chr4.2:29844903-29844922 | MS.gene045479:CDS | 55.0% | |
| !! | AGGGAGTATCTTCCCATGGG+TGG | + | chr4.2:29846571-29846590 | MS.gene045479:intron | 55.0% |
| !! | GAGCAGGGAGTATCTTCCCA+TGG | + | chr4.2:29846567-29846586 | MS.gene045479:intron | 55.0% |
| CAGCGGGATGACACCAGAAC+AGG | + | chr4.2:29848960-29848979 | MS.gene045479:CDS | 60.0% | |
| GACTTGGACCAGGTGGGAAC+TGG | - | chr4.2:29846763-29846782 | None:intergenic | 60.0% | |
| CTCAACCGGAGCTCCGTCAC+CGG | + | chr4.2:29844461-29844480 | MS.gene045479:CDS | 65.0% | |
| !! | TAGCTCCGGTGACGGAGCTC+CGG | - | chr4.2:29844469-29844488 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 29844428 | 29849222 | 29844428 | ID=MS.gene045479 |
| chr4.2 | mRNA | 29844428 | 29849222 | 29844428 | ID=MS.gene045479.t1;Parent=MS.gene045479 |
| chr4.2 | exon | 29844428 | 29844601 | 29844428 | ID=MS.gene045479.t1.exon1;Parent=MS.gene045479.t1 |
| chr4.2 | CDS | 29844428 | 29844601 | 29844428 | ID=cds.MS.gene045479.t1;Parent=MS.gene045479.t1 |
| chr4.2 | exon | 29844903 | 29844988 | 29844903 | ID=MS.gene045479.t1.exon2;Parent=MS.gene045479.t1 |
| chr4.2 | CDS | 29844903 | 29844988 | 29844903 | ID=cds.MS.gene045479.t1;Parent=MS.gene045479.t1 |
| chr4.2 | exon | 29846573 | 29846779 | 29846573 | ID=MS.gene045479.t1.exon3;Parent=MS.gene045479.t1 |
| chr4.2 | CDS | 29846573 | 29846779 | 29846573 | ID=cds.MS.gene045479.t1;Parent=MS.gene045479.t1 |
| chr4.2 | exon | 29846920 | 29847025 | 29846920 | ID=MS.gene045479.t1.exon4;Parent=MS.gene045479.t1 |
| chr4.2 | CDS | 29846920 | 29847025 | 29846920 | ID=cds.MS.gene045479.t1;Parent=MS.gene045479.t1 |
| chr4.2 | exon | 29847268 | 29847372 | 29847268 | ID=MS.gene045479.t1.exon5;Parent=MS.gene045479.t1 |
| chr4.2 | CDS | 29847268 | 29847372 | 29847268 | ID=cds.MS.gene045479.t1;Parent=MS.gene045479.t1 |
| chr4.2 | exon | 29847464 | 29847636 | 29847464 | ID=MS.gene045479.t1.exon6;Parent=MS.gene045479.t1 |
| chr4.2 | CDS | 29847464 | 29847636 | 29847464 | ID=cds.MS.gene045479.t1;Parent=MS.gene045479.t1 |
| chr4.2 | exon | 29847923 | 29848082 | 29847923 | ID=MS.gene045479.t1.exon7;Parent=MS.gene045479.t1 |
| chr4.2 | CDS | 29847923 | 29848082 | 29847923 | ID=cds.MS.gene045479.t1;Parent=MS.gene045479.t1 |
| chr4.2 | exon | 29848611 | 29848706 | 29848611 | ID=MS.gene045479.t1.exon8;Parent=MS.gene045479.t1 |
| chr4.2 | CDS | 29848611 | 29848706 | 29848611 | ID=cds.MS.gene045479.t1;Parent=MS.gene045479.t1 |
| chr4.2 | exon | 29848943 | 29849037 | 29848943 | ID=MS.gene045479.t1.exon9;Parent=MS.gene045479.t1 |
| chr4.2 | CDS | 29848943 | 29849037 | 29848943 | ID=cds.MS.gene045479.t1;Parent=MS.gene045479.t1 |
| chr4.2 | exon | 29849150 | 29849222 | 29849150 | ID=MS.gene045479.t1.exon10;Parent=MS.gene045479.t1 |
| chr4.2 | CDS | 29849150 | 29849222 | 29849150 | ID=cds.MS.gene045479.t1;Parent=MS.gene045479.t1 |
| Gene Sequence |
| Protein sequence |
