Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047008.t1 | PNY09036.1 | 90.8 | 666 | 30 | 3 | 7 | 646 | 16 | 676 | 1.00E-251 | 879.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047008.t1 | Q9LM25 | 62.8 | 658 | 207 | 4 | 5 | 632 | 9 | 658 | 2.9e-162 | 573.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047008.t1 | A0A2K3P165 | 90.8 | 666 | 30 | 3 | 7 | 646 | 16 | 676 | 7.3e-252 | 879.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47967 | MS.gene047008 | PPI |
| MS.gene047008 | MS.gene57360 | PPI |
| MS.gene27997 | MS.gene047008 | PPI |
| MS.gene030876 | MS.gene047008 | PPI |
| MS.gene047008 | MS.gene75708 | PPI |
| MS.gene045393 | MS.gene047008 | PPI |
| MS.gene047008 | MS.gene77496 | PPI |
| MS.gene047008 | MS.gene79861 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047008.t1 | MTR_8g107400 | 95.104 | 674 | 5 | 2 | 1 | 646 | 1 | 674 | 0.0 | 1305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047008.t1 | AT1G18260 | 72.111 | 649 | 143 | 4 | 5 | 623 | 9 | 649 | 0.0 | 964 |
| MS.gene047008.t1 | AT1G73570 | 61.212 | 660 | 174 | 7 | 7 | 634 | 11 | 620 | 0.0 | 806 |
Find 201 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCAGCAGCATTCCCTTTC+TGG | 0.111186 | 4.3:-192747 | None:intergenic |
| CTCAACCCAAGCTTCTAATT+TGG | 0.133073 | 4.3:-196480 | None:intergenic |
| TGGGATTGGGATTGGGATTG+GGG | 0.191592 | 4.3:-192197 | None:intergenic |
| GAACATGCTGCTTTACTAAT+TGG | 0.216409 | 4.3:+194451 | MS.gene047008:CDS |
| CTTCCTCTTTGAAGTCTTCC+TGG | 0.216814 | 4.3:-192049 | None:intergenic |
| TTGGGATTGGGATTGGGATT+GGG | 0.229562 | 4.3:-192198 | None:intergenic |
| CTTTCAGATTCTCGAGTATC+AGG | 0.269138 | 4.3:+192723 | MS.gene047008:CDS |
| TTTCTGCAACTAATTTGTAT+AGG | 0.289820 | 4.3:-194180 | None:intergenic |
| CGTTAAGCTTTATGCTGAAT+TGG | 0.295852 | 4.3:+192573 | MS.gene047008:CDS |
| GAACCATGCTGACAGTTTAT+TGG | 0.304241 | 4.3:+194830 | MS.gene047008:CDS |
| TTCGATGACAGGAGAATCTT+TGG | 0.308385 | 4.3:-192626 | None:intergenic |
| GCTCCATTGTGTAGCCTAAC+AGG | 0.313274 | 4.3:-192649 | None:intergenic |
| TCAACCCAAGCTTCTAATTT+GGG | 0.314522 | 4.3:-196479 | None:intergenic |
| CCAAGTTCATTAGGGCGATT+TGG | 0.319646 | 4.3:-196626 | None:intergenic |
| CGAGATCTTCTTCGGATTTG+TGG | 0.319764 | 4.3:-192130 | None:intergenic |
| CTCTTACAAGCTTGTGGGTT+CGG | 0.324705 | 4.3:+194805 | MS.gene047008:CDS |
| CTCCTTTGTCGACGGCCTTA+AGG | 0.327936 | 4.3:-192846 | None:intergenic |
| TTCTGCAACTAATTTGTATA+GGG | 0.339271 | 4.3:-194179 | None:intergenic |
| ATCGGATTGGGATTGGGATT+GGG | 0.340398 | 4.3:-192204 | None:intergenic |
| ATTGGGATTGGGATTGGGAT+TGG | 0.341468 | 4.3:-192199 | None:intergenic |
| GCAGGCACACCAAGTTCATT+AGG | 0.341898 | 4.3:-196635 | None:intergenic |
| CCGGCTGCACAATCAGTGTT+AGG | 0.347506 | 4.3:+192332 | MS.gene047008:CDS |
| GCTTGGATTCTCGACAAATA+TGG | 0.347854 | 4.3:+194328 | MS.gene047008:CDS |
| GCCCTAGAAGCATACTTAAA+AGG | 0.356535 | 4.3:+194232 | MS.gene047008:CDS |
| CCACATAATTGATTCTTTGC+CGG | 0.356912 | 4.3:+196448 | MS.gene047008:CDS |
| TTGGGTTGAGAATGTGCTTT+TGG | 0.359424 | 4.3:+196493 | MS.gene047008:CDS |
| CAAAGGAGAGCCTCGCTCTA+TGG | 0.359917 | 4.3:+192861 | MS.gene047008:CDS |
| CACCTCTATTCTGCTTATAA+TGG | 0.362654 | 4.3:+192973 | MS.gene047008:CDS |
| GTCGGTATCGGATTGGGATT+GGG | 0.365288 | 4.3:-192210 | None:intergenic |
| TGGTTGAGGGTTCGAAGATT+TGG | 0.369315 | 4.3:-192169 | None:intergenic |
| TATCGGATTGGGATTGGGAT+TGG | 0.375739 | 4.3:-192205 | None:intergenic |
| ACAAGACACCCAGGTTATAA+TGG | 0.382368 | 4.3:-193258 | None:intergenic |
| ATTGGAGATGCATATTACTA+TGG | 0.384953 | 4.3:+194469 | MS.gene047008:CDS |
| GTATGCTTCTAGGGCCCATC+TGG | 0.385561 | 4.3:-194224 | None:intergenic |
| GCGAGCTGGTAGAAAGCCTT+TGG | 0.388487 | 4.3:-193358 | None:intergenic |
| CCTCGCTCTATGGAACTTCT+TGG | 0.389738 | 4.3:+192871 | MS.gene047008:CDS |
| GCACAAGCCATGTTCAATCT+TGG | 0.390604 | 4.3:+194672 | MS.gene047008:CDS |
| AGCAGCAGCATTCCCTTTCT+GGG | 0.397407 | 4.3:-192746 | None:intergenic |
| AGCATGTGCATGGGTGAATC+TGG | 0.400739 | 4.3:+194358 | MS.gene047008:CDS |
| ATTGAAACAGCTGCAGAATC+TGG | 0.402527 | 4.3:+192305 | MS.gene047008:CDS |
| TTCATCCCACTCGGCGGAAG+AGG | 0.403275 | 4.3:-192090 | None:intergenic |
| TTTGAGGCGTGACCATTCTA+AGG | 0.404190 | 4.3:+192810 | MS.gene047008:CDS |
| CAATTCAGCATAAAGCTTAA+CGG | 0.408340 | 4.3:-192572 | None:intergenic |
| CATGGAGTTCTTTGTCCAGA+TGG | 0.413844 | 4.3:+194209 | MS.gene047008:CDS |
| GAGATATATGCCAGGGGAGC+AGG | 0.414002 | 4.3:+192895 | MS.gene047008:CDS |
| CTATCCCAAATTAGAAGCTT+GGG | 0.415557 | 4.3:+196475 | MS.gene047008:CDS |
| TCTCTCAACACCTGCTCCCC+TGG | 0.418996 | 4.3:-192905 | None:intergenic |
| AGCAGAATAGAGGTGGTGTT+TGG | 0.420812 | 4.3:-192965 | None:intergenic |
| TCTATCCCAAATTAGAAGCT+TGG | 0.428097 | 4.3:+196474 | MS.gene047008:CDS |
| AGTAAGCCATTCAAAAGCTT+TGG | 0.432560 | 4.3:-192935 | None:intergenic |
| CGTCGGTATCGGATTGGGAT+TGG | 0.434229 | 4.3:-192211 | None:intergenic |
| GAGAGCGTCGGTATCGGATT+GGG | 0.434446 | 4.3:-192216 | None:intergenic |
| AAGCACTCAGAAAGTCTAAA+GGG | 0.435467 | 4.3:+192686 | MS.gene047008:CDS |
| ACTTTGGCCTTCGTGGTTTG+AGG | 0.440005 | 4.3:+192794 | MS.gene047008:CDS |
| TTGTGCATTAGATTGTGATT+TGG | 0.440437 | 4.3:-194655 | None:intergenic |
| GAGATCTTCTTCGGATTTGT+GGG | 0.440968 | 4.3:-192129 | None:intergenic |
| CCAAATCGCCCTAATGAACT+TGG | 0.445548 | 4.3:+196626 | MS.gene047008:CDS |
| GTGGTGGCAAGCTTCTGAGC+AGG | 0.454049 | 4.3:+194423 | MS.gene047008:CDS |
| ACTGGCTCTTACAAGCTTGT+GGG | 0.457829 | 4.3:+194800 | MS.gene047008:CDS |
| TCCGAAGAAGATCTCGATCC+TGG | 0.458601 | 4.3:+192137 | MS.gene047008:CDS |
| CACAAGCCATGTTCAATCTT+GGG | 0.458951 | 4.3:+194673 | MS.gene047008:CDS |
| CTTGTAAGAGCCAGTGTGAC+TGG | 0.459303 | 4.3:-194792 | None:intergenic |
| CACTGGCTCTTACAAGCTTG+TGG | 0.460890 | 4.3:+194799 | MS.gene047008:CDS |
| AAGATTTGGCGCCATGAGCC+AGG | 0.462678 | 4.3:-192155 | None:intergenic |
| CCACTCGGCGGAAGAGGAAT+CGG | 0.463262 | 4.3:-192084 | None:intergenic |
| GAAGAGGAATCGGAATCAGC+GGG | 0.465967 | 4.3:-192074 | None:intergenic |
| CTGGTAGTACATGAACTAGA+TGG | 0.467890 | 4.3:-196660 | None:intergenic |
| GGGATTGGGATTGGGATTGG+GGG | 0.469505 | 4.3:-192196 | None:intergenic |
| TATTTGTACGTCAAAGGCTA+TGG | 0.472526 | 4.3:+193003 | MS.gene047008:CDS |
| AGGCAAGCTGTTGTTGTAGC+TGG | 0.473119 | 4.3:+196590 | MS.gene047008:CDS |
| GCCAGGATCGAGATCTTCTT+CGG | 0.476479 | 4.3:-192138 | None:intergenic |
| ATCAGCGGGCACATTCTTTG+TGG | 0.476723 | 4.3:+194404 | MS.gene047008:CDS |
| TTCCTCTTTGAAGTCTTCCT+GGG | 0.477460 | 4.3:-192048 | None:intergenic |
| CTACGTTCTCGTCCTTTCCC+AGG | 0.477744 | 4.3:+192031 | MS.gene047008:CDS |
| CAGGCACACCAAGTTCATTA+GGG | 0.479473 | 4.3:-196634 | None:intergenic |
| GGCACTCTCATGGTTCCTTA+AGG | 0.482247 | 4.3:+192831 | MS.gene047008:CDS |
| TCCGCCGAGTGGGATGAATT+CGG | 0.482359 | 4.3:+192095 | MS.gene047008:CDS |
| CCTAACACTGATTGTGCAGC+CGG | 0.484541 | 4.3:-192332 | None:intergenic |
| TCTAATTTGGGATAGACATC+CGG | 0.486599 | 4.3:-196467 | None:intergenic |
| CGGCTGCACAATCAGTGTTA+GGG | 0.491821 | 4.3:+192333 | MS.gene047008:CDS |
| TAGAAGAGAGAGAAACAACT+TGG | 0.492781 | 4.3:-191970 | None:intergenic |
| TCTTATGTCAGGGAACTGCC+AGG | 0.493614 | 4.3:+194598 | MS.gene047008:intron |
| ATGGAGTTCTTTGTCCAGAT+GGG | 0.494613 | 4.3:+194210 | MS.gene047008:CDS |
| TACAAATTAGTTGCAGAAAG+AGG | 0.498474 | 4.3:+194184 | MS.gene047008:CDS |
| AGCTTCATCATAGTAACGCT+TGG | 0.499212 | 4.3:-194742 | None:intergenic |
| CATTCTTGAGTACAACATAT+AGG | 0.500669 | 4.3:-194269 | None:intergenic |
| CAGAAAGTCTAAAGGGGAAG+AGG | 0.501798 | 4.3:+192693 | MS.gene047008:CDS |
| GTCTTGTATCTCAAAGGGAT+TGG | 0.502155 | 4.3:+193274 | MS.gene047008:CDS |
| AACGTAGGGACGAGCGGCGA+CGG | 0.502357 | 4.3:-192015 | None:intergenic |
| AGCCTAACAGGTTCGATGAC+AGG | 0.503789 | 4.3:-192637 | None:intergenic |
| AGCAGCTCGGTCATAATCCC+TGG | 0.507473 | 4.3:-194616 | None:intergenic |
| CCCGCAGATACAGCACAGTT+AGG | 0.510812 | 4.3:-196556 | None:intergenic |
| CTGTGCTGTATCTGCGGGAG+AGG | 0.511204 | 4.3:+196561 | MS.gene047008:CDS |
| CTGGGTGTCTTGTATCTCAA+AGG | 0.513773 | 4.3:+193268 | MS.gene047008:CDS |
| CTATATGTTGTACTCAAGAA+TGG | 0.515930 | 4.3:+194270 | MS.gene047008:CDS |
| TGATGCAGAAAGGCATCAGC+GGG | 0.520042 | 4.3:+194390 | MS.gene047008:CDS |
| TGCAGCTGTTTCAATCTCGC+CGG | 0.520981 | 4.3:-192297 | None:intergenic |
| TCTTGAACCCAACACCAAGA+TGG | 0.522594 | 4.3:-193390 | None:intergenic |
| AGAGAGCGTCGGTATCGGAT+TGG | 0.523428 | 4.3:-192217 | None:intergenic |
| ATCGGTTATTTGTACGTCAA+AGG | 0.524544 | 4.3:+192997 | MS.gene047008:CDS |
| AGCTAATGACAGGGGATGCT+AGG | 0.525671 | 4.3:+192258 | MS.gene047008:CDS |
| AGCCTTTGGTTGACCGTGGT+TGG | 0.525956 | 4.3:-193344 | None:intergenic |
| GTGACTGGCAACTTAGCTGC+AGG | 0.528860 | 4.3:-194777 | None:intergenic |
| CAGTTAGGAGGCACGCAAAG+AGG | 0.529036 | 4.3:-196541 | None:intergenic |
| TCCTAACTGTGCTGTATCTG+CGG | 0.531215 | 4.3:+196555 | MS.gene047008:CDS |
| TGCCATTATAAGCAGAATAG+AGG | 0.532353 | 4.3:-192975 | None:intergenic |
| GAGATGCATATTACTATGGC+CGG | 0.532375 | 4.3:+194473 | MS.gene047008:CDS |
| GTAGTAGAGAGCGTCGGTAT+CGG | 0.537121 | 4.3:-192222 | None:intergenic |
| GCCGTCGCTAAGCTAATGAC+AGG | 0.537549 | 4.3:+192248 | MS.gene047008:CDS |
| GCATACTTAAAAGGCGATGT+TGG | 0.538174 | 4.3:+194241 | MS.gene047008:CDS |
| GGTTGGAGGCCATTATAACC+TGG | 0.538907 | 4.3:+193249 | MS.gene047008:CDS |
| CCTAACTGTGCTGTATCTGC+GGG | 0.539131 | 4.3:+196556 | MS.gene047008:CDS |
| TCGAGTATCAGGCCCAGAAA+GGG | 0.539269 | 4.3:+192734 | MS.gene047008:CDS |
| TATTCTGCTTATAATGGCAT+CGG | 0.539588 | 4.3:+192979 | MS.gene047008:CDS |
| TACTCAAGAATGGCTGAGAT+GGG | 0.540274 | 4.3:+194280 | MS.gene047008:CDS |
| TTCTTGGAGAGATATATGCC+AGG | 0.541938 | 4.3:+192887 | MS.gene047008:CDS |
| TGGCACAGAGCAATGCTGCT+TGG | 0.542410 | 4.3:+194311 | MS.gene047008:CDS |
| GAAGCACTCAGAAAGTCTAA+AGG | 0.545764 | 4.3:+192685 | MS.gene047008:CDS |
| CTTTGAAGTCTTCCTGGGAA+AGG | 0.546194 | 4.3:-192043 | None:intergenic |
| CTCGAGTATCAGGCCCAGAA+AGG | 0.546827 | 4.3:+192733 | MS.gene047008:CDS |
| GTACTCAAGAATGGCTGAGA+TGG | 0.546890 | 4.3:+194279 | MS.gene047008:CDS |
| TGGGTGTCTTGTATCTCAAA+GGG | 0.547469 | 4.3:+193269 | MS.gene047008:CDS |
| ACCATGAGAGTGCCTTAGAA+TGG | 0.547779 | 4.3:-192822 | None:intergenic |
| GGCATGTAAATTCTTTATTG+TGG | 0.547891 | 4.3:+193318 | MS.gene047008:CDS |
| CTCCTGTCATCGAACCTGTT+AGG | 0.549324 | 4.3:+192635 | MS.gene047008:CDS |
| GGGACGAGCGGCGACGGAGA+GGG | 0.550536 | 4.3:-192009 | None:intergenic |
| AAGATCTCGATCCTGGCTCA+TGG | 0.552357 | 4.3:+192144 | MS.gene047008:CDS |
| AGCTAAGTTGCCAGTCACAC+TGG | 0.552431 | 4.3:+194782 | MS.gene047008:CDS |
| ATCTGCGGGAGAGGCAAAGA+AGG | 0.552687 | 4.3:+196570 | MS.gene047008:CDS |
| GAAGGTCAAGAGGAAGTCCT+TGG | 0.553360 | 4.3:-194713 | None:intergenic |
| AGCGGGCACATTCTTTGTGG+TGG | 0.557705 | 4.3:+194407 | MS.gene047008:CDS |
| CGATTCCTCTTCCGCCGAGT+GGG | 0.558351 | 4.3:+192085 | MS.gene047008:CDS |
| GACGAGAACGTAGGGACGAG+CGG | 0.563841 | 4.3:-192021 | None:intergenic |
| GCTGCTGATAACGAAGAGGT+TGG | 0.564461 | 4.3:+193232 | MS.gene047008:CDS |
| CTGATGCAGAAAGGCATCAG+CGG | 0.569709 | 4.3:+194389 | MS.gene047008:CDS |
| GATGGAAAATCTTTGCGAGC+TGG | 0.569784 | 4.3:-193372 | None:intergenic |
| TACATGAACTAGATGGGTGC+AGG | 0.570563 | 4.3:-196653 | None:intergenic |
| GCTGATAACGAAGAGGTTGG+AGG | 0.571487 | 4.3:+193235 | MS.gene047008:CDS |
| TGGTGGCAAGCTTCTGAGCA+GGG | 0.573319 | 4.3:+194424 | MS.gene047008:CDS |
| TGGGAAAGGACGAGAACGTA+GGG | 0.573995 | 4.3:-192029 | None:intergenic |
| TTCCTTAAGGCCGTCGACAA+AGG | 0.580842 | 4.3:+192844 | MS.gene047008:CDS |
| CTTAAAAGGCGATGTTGGCA+AGG | 0.581519 | 4.3:+194246 | MS.gene047008:CDS |
| GGATTATGACCGAGCTGCTG+AGG | 0.581564 | 4.3:+194620 | MS.gene047008:CDS |
| CCGGCAAAGAATCAATTATG+TGG | 0.581872 | 4.3:-196448 | None:intergenic |
| TGGTAGTACATGAACTAGAT+GGG | 0.582581 | 4.3:-196659 | None:intergenic |
| GCATGTAAGCCTCAGCAGCT+CGG | 0.584759 | 4.3:-194629 | None:intergenic |
| TGCCAACCACGGTCAACCAA+AGG | 0.585107 | 4.3:+193342 | MS.gene047008:CDS |
| CATGTACCCAAGATTGAACA+TGG | 0.588032 | 4.3:-194679 | None:intergenic |
| GTTCAAGAAGAACGTTCCGT+TGG | 0.590782 | 4.3:+193405 | MS.gene047008:CDS |
| TACATGCATGAGCATGGCCA+AGG | 0.593236 | 4.3:+194696 | MS.gene047008:CDS |
| AGCTGCAGAATCTGGTCACC+CGG | 0.594384 | 4.3:+192313 | MS.gene047008:CDS |
| AGATGCATATTACTATGGCC+GGG | 0.594389 | 4.3:+194474 | MS.gene047008:CDS |
| CTTATGTCAGGGAACTGCCA+GGG | 0.594647 | 4.3:+194599 | MS.gene047008:intron |
| CCCTGTCATTAGCTTAGCGA+CGG | 0.596197 | 4.3:-192249 | None:intergenic |
| AGCTGTTGTTGTAGCTGGAG+AGG | 0.596230 | 4.3:+196595 | MS.gene047008:CDS |
| AGTTAGGAGGCACGCAAAGA+GGG | 0.597506 | 4.3:-196540 | None:intergenic |
| CCGATTCCTCTTCCGCCGAG+TGG | 0.598866 | 4.3:+192084 | MS.gene047008:CDS |
| AGGATCATAGAAGAGGGCTC+CGG | 0.599402 | 4.3:+192278 | MS.gene047008:CDS |
| AATGGCTGAGATGGGCTATG+AGG | 0.600102 | 4.3:+194288 | MS.gene047008:CDS |
| ACCATTCTAAGGCACTCTCA+TGG | 0.600969 | 4.3:+192821 | MS.gene047008:CDS |
| CTTGGGTACATGCATGAGCA+TGG | 0.601824 | 4.3:+194690 | MS.gene047008:CDS |
| GGAAGAGGAATCGGAATCAG+CGG | 0.605062 | 4.3:-192075 | None:intergenic |
| TTTATTGTGGCTGCCAACCA+CGG | 0.607057 | 4.3:+193331 | MS.gene047008:CDS |
| TGGAGAACGAAGCATGTGCA+TGG | 0.609705 | 4.3:+194348 | MS.gene047008:CDS |
| TCTTGGAGAGATATATGCCA+GGG | 0.613142 | 4.3:+192888 | MS.gene047008:CDS |
| CCGTCGCTAAGCTAATGACA+GGG | 0.614941 | 4.3:+192249 | MS.gene047008:CDS |
| AGTAACGCTTGGCTAGATGA+AGG | 0.615333 | 4.3:-194731 | None:intergenic |
| GCAGATACAGCACAGTTAGG+AGG | 0.616456 | 4.3:-196553 | None:intergenic |
| GCTGCTGCTATGTACAAAGT+CGG | 0.618345 | 4.3:+192760 | MS.gene047008:CDS |
| TCACCAATAAACTGTCAGCA+TGG | 0.619540 | 4.3:-194833 | None:intergenic |
| GTTGGAGGCCATTATAACCT+GGG | 0.621285 | 4.3:+193250 | MS.gene047008:CDS |
| CTAACACTGATTGTGCAGCC+GGG | 0.623985 | 4.3:-192331 | None:intergenic |
| AGTGAAAAGAGATGTCAAGT+TGG | 0.627405 | 4.3:+193297 | MS.gene047008:CDS |
| GGATGCTAGGATCATAGAAG+AGG | 0.627897 | 4.3:+192271 | MS.gene047008:CDS |
| AGAAGAGAGAGAAACAACTT+GGG | 0.628704 | 4.3:-191969 | None:intergenic |
| TTGGCTAGATGAAGGTCAAG+AGG | 0.635355 | 4.3:-194723 | None:intergenic |
| TGTCATTAGCTTAGCGACGG+CGG | 0.640658 | 4.3:-192246 | None:intergenic |
| GATGCTAGGATCATAGAAGA+GGG | 0.642173 | 4.3:+192272 | MS.gene047008:CDS |
| AGGGACGAGCGGCGACGGAG+AGG | 0.645419 | 4.3:-192010 | None:intergenic |
| AGCACTCAGAAAGTCTAAAG+GGG | 0.648367 | 4.3:+192687 | MS.gene047008:CDS |
| TTCCCAGGAAGACTTCAAAG+AGG | 0.649010 | 4.3:+192046 | MS.gene047008:CDS |
| CATCTGGACAAAGAACTCCA+TGG | 0.650425 | 4.3:-194208 | None:intergenic |
| GCGAGGCTCTCCTTTGTCGA+CGG | 0.651834 | 4.3:-192854 | None:intergenic |
| CTGGGAAAGGACGAGAACGT+AGG | 0.654943 | 4.3:-192030 | None:intergenic |
| AGAAAGCCTTTGGTTGACCG+TGG | 0.656771 | 4.3:-193348 | None:intergenic |
| CATTATAAGCAGAATAGAGG+TGG | 0.658072 | 4.3:-192972 | None:intergenic |
| AGAGAGAGAAACAACTTGGG+TGG | 0.661851 | 4.3:-191966 | None:intergenic |
| GGCTGAGATGGGCTATGAGG+TGG | 0.663373 | 4.3:+194291 | MS.gene047008:CDS |
| CCAAGAAGTTCCATAGAGCG+AGG | 0.664738 | 4.3:-192871 | None:intergenic |
| GTCACCGAATTCATCCCACT+CGG | 0.672938 | 4.3:-192099 | None:intergenic |
| TAGTTGCAGAAAGAGGTCCA+TGG | 0.680024 | 4.3:+194191 | MS.gene047008:CDS |
| CTTTGAGATACAAGACACCC+AGG | 0.682977 | 4.3:-193267 | None:intergenic |
| AAAGGCTGCTGATAACGAAG+AGG | 0.689088 | 4.3:+193228 | MS.gene047008:CDS |
| ACCGAATTCATCCCACTCGG+CGG | 0.692055 | 4.3:-192096 | None:intergenic |
| GGAGAACGAAGCATGTGCAT+GGG | 0.696482 | 4.3:+194349 | MS.gene047008:CDS |
| CTTGGAGAGATATATGCCAG+GGG | 0.717789 | 4.3:+192889 | MS.gene047008:CDS |
| GAACCTGTTAGGCTACACAA+TGG | 0.719174 | 4.3:+192646 | MS.gene047008:CDS |
| CGTCGCTAAGCTAATGACAG+GGG | 0.719990 | 4.3:+192250 | MS.gene047008:CDS |
| AAGAGGAATCGGAATCAGCG+GGG | 0.738604 | 4.3:-192073 | None:intergenic |
| GGCGGAGTAGTAGAGAGCGT+CGG | 0.742864 | 4.3:-192228 | None:intergenic |
| GGTCACGCCTCAAACCACGA+AGG | 0.781390 | 4.3:-192801 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATATATTAAAATAGGT+TGG | - | chr4.3:195157-195176 | None:intergenic | 10.0% |
| !! | GAGTAATAATATATTAAAAT+AGG | - | chr4.3:195161-195180 | None:intergenic | 10.0% |
| !!! | AAAAAGTAAATTTTAAAAAG+CGG | - | chr4.3:195105-195124 | None:intergenic | 10.0% |
| !!! | TTATAATAAATATGTTTCTA+AGG | - | chr4.3:195183-195202 | None:intergenic | 10.0% |
| !!! | TTTTATTTTATTTATACCTA+GGG | - | chr4.3:196155-196174 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTATTTATACCT+AGG | - | chr4.3:196156-196175 | None:intergenic | 10.0% |
| !! | AATATTAAATTTGTGATCTT+AGG | + | chr4.3:194150-194169 | MS.gene047008:intron | 15.0% |
| !! | AATGTTATGTAAATAAAGAA+AGG | - | chr4.3:193082-193101 | None:intergenic | 15.0% |
| !! | ACGATTCATAAATTTAATAT+TGG | - | chr4.3:194061-194080 | None:intergenic | 15.0% |
| !! | CGATTCATAAATTTAATATT+GGG | - | chr4.3:194060-194079 | None:intergenic | 15.0% |
| !! | TTATGATATAATAGTCATTA+GGG | - | chr4.3:194097-194116 | None:intergenic | 15.0% |
| !! | TTGATTCATTAATTAAGAAT+AGG | - | chr4.3:192514-192533 | None:intergenic | 15.0% |
| !! | TTTATGATATAATAGTCATT+AGG | - | chr4.3:194098-194117 | None:intergenic | 15.0% |
| !!! | AAAAAAAGTTTTTATGAAAG+AGG | + | chr4.3:193728-193747 | MS.gene047008:intron | 15.0% |
| !!! | AAAAGTAAATTTTAAAAAGC+GGG | - | chr4.3:195104-195123 | None:intergenic | 15.0% |
| !!! | AAACTATTTTTCGATAAAAT+AGG | - | chr4.3:196239-196258 | None:intergenic | 15.0% |
| !!! | AACTTTTTTTTTTGCAAATT+CGG | - | chr4.3:193718-193737 | None:intergenic | 15.0% |
| !!! | ATTTTTATGATTTTATTCCT+AGG | + | chr4.3:196099-196118 | MS.gene047008:intron | 15.0% |
| !!! | TAAAAAACTTTTTTCAAAAG+AGG | - | chr4.3:195213-195232 | None:intergenic | 15.0% |
| !! | AATAAAATAAAAACCATTCC+CGG | + | chr4.3:196163-196182 | MS.gene047008:intron | 20.0% |
| !! | ATAATTATGATGGTCATTAT+TGG | + | chr4.3:194020-194039 | MS.gene047008:intron | 20.0% |
| !! | GAAAGGAAAAAAAAAATGTA+AGG | - | chr4.3:193065-193084 | None:intergenic | 20.0% |
| !! | GGAATGGTAATAAAAAAAAA+AGG | + | chr4.3:196186-196205 | MS.gene047008:intron | 20.0% |
| !! | GTATTTAGAAAAAAGATGTT+TGG | + | chr4.3:195934-195953 | MS.gene047008:intron | 20.0% |
| !! | TATACTAAAATAAATTGCAG+AGG | - | chr4.3:193528-193547 | None:intergenic | 20.0% |
| !! | TCATTAGAACATAATTATGA+TGG | + | chr4.3:194010-194029 | MS.gene047008:intron | 20.0% |
| !! | TTACCTATGATCTATTTAAA+TGG | + | chr4.3:195539-195558 | MS.gene047008:intron | 20.0% |
| !! | TTATGTTCTAATGAATTATG+TGG | - | chr4.3:194004-194023 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTCCAAAAGAAAA+TGG | - | chr4.3:196011-196030 | None:intergenic | 20.0% |
| !!! | AATAAAGTTCCCTATTTTTA+AGG | - | chr4.3:195984-196003 | None:intergenic | 20.0% |
| !!! | AATGAAGACTAATCTTATTT+GGG | + | chr4.3:193114-193133 | MS.gene047008:intron | 20.0% |
| !!! | AGTTTACTAAATTTTATTCC+CGG | - | chr4.3:196057-196076 | None:intergenic | 20.0% |
| !!! | ATGTGCTTATTGTTTTTATT+AGG | + | chr4.3:196424-196443 | MS.gene047008:intron | 20.0% |
| !!! | GGAAATTTGGATTTTTAATA+CGG | + | chr4.3:195032-195051 | MS.gene047008:intron | 20.0% |
| !!! | GTCTTTAAAAATGATATTGA+AGG | + | chr4.3:193643-193662 | MS.gene047008:intron | 20.0% |
| !!! | TGATGAAGTTTTTAATATTG+CGG | + | chr4.3:195662-195681 | MS.gene047008:intron | 20.0% |
| !!! | TTTTGTTTTGTATTATACAC+TGG | + | chr4.3:193674-193693 | MS.gene047008:intron | 20.0% |
| ! | AAATGAACATAAACTACAAC+AGG | - | chr4.3:195485-195504 | None:intergenic | 25.0% |
| ! | AACAGTGAATACTGAATTAA+TGG | - | chr4.3:193952-193971 | None:intergenic | 25.0% |
| ! | ACTAAACCAAACTTATAGTT+CGG | - | chr4.3:193767-193786 | None:intergenic | 25.0% |
| ! | AGAAAAAATAACACAACAGA+AGG | - | chr4.3:196363-196382 | None:intergenic | 25.0% |
| ! | AGTAAACTTGTAACAAACAT+AGG | + | chr4.3:196069-196088 | MS.gene047008:intron | 25.0% |
| ! | AGTTATATTTGTAGATTCCT+AGG | - | chr4.3:196119-196138 | None:intergenic | 25.0% |
| ! | ATAAAATAAAAACCATTCCC+GGG | + | chr4.3:196164-196183 | MS.gene047008:intron | 25.0% |
| ! | ATATAATAGTCATTAGGGAA+TGG | - | chr4.3:194092-194111 | None:intergenic | 25.0% |
| ! | ATTTCTACCTTTATATTCCA+AGG | - | chr4.3:195903-195922 | None:intergenic | 25.0% |
| ! | CATTGGAGTAAAATACAAAT+TGG | - | chr4.3:196271-196290 | None:intergenic | 25.0% |
| ! | GAATGAAGACTAATCTTATT+TGG | + | chr4.3:193113-193132 | MS.gene047008:intron | 25.0% |
| ! | GTTGTAGTTTATGTTCATTT+AGG | + | chr4.3:195485-195504 | MS.gene047008:intron | 25.0% |
| ! | TACATAACATTCATTCTGTA+TGG | + | chr4.3:193091-193110 | MS.gene047008:intron | 25.0% |
| ! | TAGCCATTTAAATAGATCAT+AGG | - | chr4.3:195545-195564 | None:intergenic | 25.0% |
| ! | TTATTAGCACGTATATTTGT+TGG | - | chr4.3:194132-194151 | None:intergenic | 25.0% |
| !! | AAGGTAGAAATTTTATTCCA+AGG | + | chr4.3:195912-195931 | MS.gene047008:intron | 25.0% |
| !! | AATTTGGATTTTTAATACGG+AGG | + | chr4.3:195035-195054 | MS.gene047008:intron | 25.0% |
| !! | ATAAAAAATAGAGTTTTCGC+AGG | + | chr4.3:195310-195329 | MS.gene047008:intron | 25.0% |
| !! | ATGAAGACTAATCTTATTTG+GGG | + | chr4.3:193115-193134 | MS.gene047008:intron | 25.0% |
| !! | ATTAAGAATTAGCTTACCAA+CGG | - | chr4.3:193424-193443 | None:intergenic | 25.0% |
| !! | GTTTACTAAATTTTATTCCC+GGG | - | chr4.3:196056-196075 | None:intergenic | 25.0% |
| !! | TTCTGCAACTAATTTGTATA+GGG | - | chr4.3:194182-194201 | None:intergenic | 25.0% |
| !! | TTTCTGCAACTAATTTGTAT+AGG | - | chr4.3:194183-194202 | None:intergenic | 25.0% |
| !!! | ATTATTGTGTTTTGTTGCTA+TGG | + | chr4.3:195253-195272 | MS.gene047008:intron | 25.0% |
| !!! | CATCTTTTTTCTAAATACCT+TGG | - | chr4.3:195932-195951 | None:intergenic | 25.0% |
| !!! | GAAAAATTGTTGATTAGCTT+AGG | + | chr4.3:193474-193493 | MS.gene047008:intron | 25.0% |
| !!! | TTAAAATAGGTTGGTACTTA+TGG | - | chr4.3:195148-195167 | None:intergenic | 25.0% |
| !!! | TTTTTTTTATTACCATTCCC+CGG | - | chr4.3:196185-196204 | None:intergenic | 25.0% |
| AATTAGTAAGTTGTTATGGG+CGG | + | chr4.3:193825-193844 | MS.gene047008:intron | 30.0% | |
| AGTTTATTGGTGAGTTTCTT+TGG | + | chr4.3:194843-194862 | MS.gene047008:intron | 30.0% | |
| ATAGATATGAGTAGGAAACA+AGG | - | chr4.3:193587-193606 | None:intergenic | 30.0% | |
| ATCACGTAATAGATATGAGT+AGG | - | chr4.3:193595-193614 | None:intergenic | 30.0% | |
| ATTGGAGATGCATATTACTA+TGG | + | chr4.3:194469-194488 | MS.gene047008:CDS | 30.0% | |
| CAATTCAGCATAAAGCTTAA+CGG | - | chr4.3:192575-192594 | None:intergenic | 30.0% | |
| CAGTCATTTATATGAACACT+TGG | + | chr4.3:195726-195745 | MS.gene047008:intron | 30.0% | |
| CATTCTTGAGTACAACATAT+AGG | - | chr4.3:194272-194291 | None:intergenic | 30.0% | |
| CTATATGTTGTACTCAAGAA+TGG | + | chr4.3:194270-194289 | MS.gene047008:CDS | 30.0% | |
| GCTATTCCTAGGAATAAATT+TGG | - | chr4.3:195877-195896 | None:intergenic | 30.0% | |
| GGCATGTAAATTCTTTATTG+TGG | + | chr4.3:193318-193337 | MS.gene047008:CDS | 30.0% | |
| GGGAATTAGTAAGTTGTTAT+GGG | + | chr4.3:193822-193841 | MS.gene047008:intron | 30.0% | |
| TAAAATAAAAACCATTCCCG+GGG | + | chr4.3:196165-196184 | MS.gene047008:intron | 30.0% | |
| TAAATGACTGAGTTGTGTTA+AGG | - | chr4.3:195716-195735 | None:intergenic | 30.0% | |
| TACAAATTAGTTGCAGAAAG+AGG | + | chr4.3:194184-194203 | MS.gene047008:CDS | 30.0% | |
| TAGCATTCCTTGGAATATAA+AGG | + | chr4.3:195893-195912 | MS.gene047008:intron | 30.0% | |
| TATTCTGCTTATAATGGCAT+CGG | + | chr4.3:192979-192998 | MS.gene047008:CDS | 30.0% | |
| TCCAAGGAACCTTAAAAATA+GGG | + | chr4.3:195972-195991 | MS.gene047008:intron | 30.0% | |
| TGAACATTCAATTTAAGCCA+CGG | + | chr4.3:194538-194557 | MS.gene047008:intron | 30.0% | |
| TGGCAATATGCAATCTAAAA+TGG | + | chr4.3:192433-192452 | MS.gene047008:intron | 30.0% | |
| TGGGAATTAGTAAGTTGTTA+TGG | + | chr4.3:193821-193840 | MS.gene047008:intron | 30.0% | |
| TTCCAAGGAACCTTAAAAAT+AGG | + | chr4.3:195971-195990 | MS.gene047008:intron | 30.0% | |
| TTGAGACAGAATATCATATC+AGG | - | chr4.3:195519-195538 | None:intergenic | 30.0% | |
| TTGTGCATTAGATTGTGATT+TGG | - | chr4.3:194658-194677 | None:intergenic | 30.0% | |
| ! | AACATTTTCTCCAATGTAGT+GGG | + | chr4.3:195623-195642 | MS.gene047008:intron | 30.0% |
| ! | AGTTTTCCAAAAGAAAATGG+TGG | - | chr4.3:196008-196027 | None:intergenic | 30.0% |
| ! | GTTTTCCAAAAGAAAATGGT+GGG | - | chr4.3:196007-196026 | None:intergenic | 30.0% |
| ! | TATATTGTCTGTGTTTTCTC+CGG | + | chr4.3:193972-193991 | MS.gene047008:intron | 30.0% |
| ! | TGGAAAACTTTTCTATTTCC+AGG | + | chr4.3:196019-196038 | MS.gene047008:intron | 30.0% |
| ! | TTATTCCCACCATTTTCTTT+TGG | + | chr4.3:195999-196018 | MS.gene047008:intron | 30.0% |
| !! | TAAATTTTAAAAAGCGGGTG+CGG | - | chr4.3:195099-195118 | None:intergenic | 30.0% |
| !!! | TTTTTTTATTACCATTCCCC+GGG | - | chr4.3:196184-196203 | None:intergenic | 30.0% |
| AAGCACTCAGAAAGTCTAAA+GGG | + | chr4.3:192686-192705 | MS.gene047008:CDS | 35.0% | |
| ACAATAAGCACATCACAATC+AGG | - | chr4.3:196417-196436 | None:intergenic | 35.0% | |
| ACTGAACCGAACTATAAGTT+TGG | + | chr4.3:193758-193777 | MS.gene047008:intron | 35.0% | |
| AGAAGAGAGAGAAACAACTT+GGG | - | chr4.3:191972-191991 | None:intergenic | 35.0% | |
| AGCGTACCAAATTTATTCCT+AGG | + | chr4.3:195868-195887 | MS.gene047008:intron | 35.0% | |
| AGTAAGCCATTCAAAAGCTT+TGG | - | chr4.3:192938-192957 | None:intergenic | 35.0% | |
| AGTGAAAAGAGATGTCAAGT+TGG | + | chr4.3:193297-193316 | MS.gene047008:CDS | 35.0% | |
| ATCGGTTATTTGTACGTCAA+AGG | + | chr4.3:192997-193016 | MS.gene047008:CDS | 35.0% | |
| ATGAATTATGTGGTACAGAC+CGG | - | chr4.3:193994-194013 | None:intergenic | 35.0% | |
| CAATGTCAACTTCCACTTAT+TGG | - | chr4.3:194899-194918 | None:intergenic | 35.0% | |
| CACCTCTATTCTGCTTATAA+TGG | + | chr4.3:192973-192992 | MS.gene047008:CDS | 35.0% | |
| CATTATAAGCAGAATAGAGG+TGG | - | chr4.3:192975-192994 | None:intergenic | 35.0% | |
| CTATCCCAAATTAGAAGCTT+GGG | + | chr4.3:196475-196494 | MS.gene047008:CDS | 35.0% | |
| CTTGTCTTTCTCTTATGTCA+GGG | + | chr4.3:194588-194607 | MS.gene047008:intron | 35.0% | |
| TAGAAGAGAGAGAAACAACT+TGG | - | chr4.3:191973-191992 | None:intergenic | 35.0% | |
| TATCATCACTTTGCTTCAGA+GGG | + | chr4.3:192410-192429 | MS.gene047008:intron | 35.0% | |
| TATTTGTACGTCAAAGGCTA+TGG | + | chr4.3:193003-193022 | MS.gene047008:CDS | 35.0% | |
| TCAACCCAAGCTTCTAATTT+GGG | - | chr4.3:196482-196501 | None:intergenic | 35.0% | |
| TCTATCCCAAATTAGAAGCT+TGG | + | chr4.3:196474-196493 | MS.gene047008:CDS | 35.0% | |
| TCTTGTCTTTCTCTTATGTC+AGG | + | chr4.3:194587-194606 | MS.gene047008:intron | 35.0% | |
| TGCCATTATAAGCAGAATAG+AGG | - | chr4.3:192978-192997 | None:intergenic | 35.0% | |
| TTATCATCACTTTGCTTCAG+AGG | + | chr4.3:192409-192428 | MS.gene047008:intron | 35.0% | |
| ! | AAAAATAGAGTTTTCGCAGG+TGG | + | chr4.3:195313-195332 | MS.gene047008:intron | 35.0% |
| ! | AAAATAGAGTTTTCGCAGGT+GGG | + | chr4.3:195314-195333 | MS.gene047008:intron | 35.0% |
| ! | AATCAGTGTTAGGGTTTTTG+TGG | + | chr4.3:192342-192361 | MS.gene047008:CDS | 35.0% |
| ! | ACTACACCAAAGCTTTTGAA+TGG | + | chr4.3:192929-192948 | MS.gene047008:CDS | 35.0% |
| ! | AGTTCATTTTCTTTCACCAG+TGG | - | chr4.3:195775-195794 | None:intergenic | 35.0% |
| ! | ATCAGTGTTAGGGTTTTTGT+GGG | + | chr4.3:192343-192362 | MS.gene047008:CDS | 35.0% |
| ! | ATCTTATTTGGGGAATGCAA+AGG | + | chr4.3:193125-193144 | MS.gene047008:intron | 35.0% |
| ! | CAACATTTTCTCCAATGTAG+TGG | + | chr4.3:195622-195641 | MS.gene047008:intron | 35.0% |
| ! | CCACATAATTGATTCTTTGC+CGG | + | chr4.3:196448-196467 | MS.gene047008:CDS | 35.0% |
| ! | CGTTAAGCTTTATGCTGAAT+TGG | + | chr4.3:192573-192592 | MS.gene047008:CDS | 35.0% |
| ! | GGTTTTTCCCCGTTAAAATT+GGG | - | chr4.3:194988-195007 | None:intergenic | 35.0% |
| ! | GTTTTTCCCCGTTAAAATTG+GGG | - | chr4.3:194987-195006 | None:intergenic | 35.0% |
| ! | TCTAATTTGGGATAGACATC+CGG | - | chr4.3:196470-196489 | None:intergenic | 35.0% |
| ! | TCTTATTTGGGGAATGCAAA+GGG | + | chr4.3:193126-193145 | MS.gene047008:intron | 35.0% |
| ! | TTCAAATTTTACCCCCGATA+TGG | + | chr4.3:195387-195406 | MS.gene047008:intron | 35.0% |
| ! | TTCCAGGAACATTTTATACC+CGG | + | chr4.3:196035-196054 | MS.gene047008:intron | 35.0% |
| ! | TTGGATTTTTAATACGGAGG+CGG | + | chr4.3:195038-195057 | MS.gene047008:intron | 35.0% |
| !! | AAATTTTAAAAAGCGGGTGC+GGG | - | chr4.3:195098-195117 | None:intergenic | 35.0% |
| !! | AAGATTTTCCATCTTGGTGT+TGG | + | chr4.3:193382-193401 | MS.gene047008:CDS | 35.0% |
| !! | ATTATACACTGGTTCTGATC+CGG | + | chr4.3:193685-193704 | MS.gene047008:intron | 35.0% |
| !! | GAACATGCTGCTTTACTAAT+TGG | + | chr4.3:194451-194470 | MS.gene047008:CDS | 35.0% |
| !! | GAGAGTATCATATTGACATC+AGG | - | chr4.3:193506-193525 | None:intergenic | 35.0% |
| !! | GCCTTTTAAGTATGCTTCTA+GGG | - | chr4.3:194236-194255 | None:intergenic | 35.0% |
| !!! | AGATTTTCCATCTTGGTGTT+GGG | + | chr4.3:193383-193402 | MS.gene047008:CDS | 35.0% |
| !!! | GGCAAAGGAGTATTTTGAAA+AGG | + | chr4.3:193210-193229 | MS.gene047008:intron | 35.0% |
| !!! | TCCCTATTTTTAAGGTTCCT+TGG | - | chr4.3:195976-195995 | None:intergenic | 35.0% |
| ACAACAGGTAAGTCTAGACA+TGG | - | chr4.3:195470-195489 | None:intergenic | 40.0% | |
| ACAAGACACCCAGGTTATAA+TGG | - | chr4.3:193261-193280 | None:intergenic | 40.0% | |
| ACTTGAAACAAACACACCCT+AGG | + | chr4.3:196136-196155 | MS.gene047008:intron | 40.0% | |
| AGATGCATATTACTATGGCC+GGG | + | chr4.3:194474-194493 | MS.gene047008:CDS | 40.0% | |
| AGCACTCAGAAAGTCTAAAG+GGG | + | chr4.3:192687-192706 | MS.gene047008:CDS | 40.0% | |
| AGCTTCATCATAGTAACGCT+TGG | - | chr4.3:194745-194764 | None:intergenic | 40.0% | |
| ATGGAGTTCTTTGTCCAGAT+GGG | + | chr4.3:194210-194229 | MS.gene047008:CDS | 40.0% | |
| ATTGAAACAGCTGCAGAATC+TGG | + | chr4.3:192305-192324 | MS.gene047008:CDS | 40.0% | |
| CACAAGCCATGTTCAATCTT+GGG | + | chr4.3:194673-194692 | MS.gene047008:CDS | 40.0% | |
| CAGTTTCTTGTGTGAGTTAC+AGG | + | chr4.3:193189-193208 | MS.gene047008:intron | 40.0% | |
| CATGTACCCAAGATTGAACA+TGG | - | chr4.3:194682-194701 | None:intergenic | 40.0% | |
| CCGGCAAAGAATCAATTATG+TGG | - | chr4.3:196451-196470 | None:intergenic | 40.0% | |
| CTCAACCCAAGCTTCTAATT+TGG | - | chr4.3:196483-196502 | None:intergenic | 40.0% | |
| CTTATTTGGGGAATGCAAAG+GGG | + | chr4.3:193127-193146 | MS.gene047008:intron | 40.0% | |
| CTTTCAGATTCTCGAGTATC+AGG | + | chr4.3:192723-192742 | MS.gene047008:CDS | 40.0% | |
| GAACCATGCTGACAGTTTAT+TGG | + | chr4.3:194830-194849 | MS.gene047008:CDS | 40.0% | |
| GAGATCTTCTTCGGATTTGT+GGG | - | chr4.3:192132-192151 | None:intergenic | 40.0% | |
| GAGATGCATATTACTATGGC+CGG | + | chr4.3:194473-194492 | MS.gene047008:CDS | 40.0% | |
| GATGCTAGGATCATAGAAGA+GGG | + | chr4.3:192272-192291 | MS.gene047008:CDS | 40.0% | |
| GCATACTTAAAAGGCGATGT+TGG | + | chr4.3:194241-194260 | MS.gene047008:CDS | 40.0% | |
| GCTTGGATTCTCGACAAATA+TGG | + | chr4.3:194328-194347 | MS.gene047008:CDS | 40.0% | |
| GTCTTGTATCTCAAAGGGAT+TGG | + | chr4.3:193274-193293 | MS.gene047008:CDS | 40.0% | |
| TACTCAAGAATGGCTGAGAT+GGG | + | chr4.3:194280-194299 | MS.gene047008:CDS | 40.0% | |
| TCACCAATAAACTGTCAGCA+TGG | - | chr4.3:194836-194855 | None:intergenic | 40.0% | |
| TCCAAAGTCAATCACATACC+CGG | - | chr4.3:194495-194514 | None:intergenic | 40.0% | |
| TCGTAGCAACAACCAATAAG+TGG | + | chr4.3:194884-194903 | MS.gene047008:intron | 40.0% | |
| TCTTGGAGAGATATATGCCA+GGG | + | chr4.3:192888-192907 | MS.gene047008:CDS | 40.0% | |
| TGGGTGTCTTGTATCTCAAA+GGG | + | chr4.3:193269-193288 | MS.gene047008:CDS | 40.0% | |
| TGGTACGCTTGAAACAAACA+GGG | - | chr4.3:195857-195876 | None:intergenic | 40.0% | |
| TTCCAAGGAATGCTATTCCT+AGG | - | chr4.3:195888-195907 | None:intergenic | 40.0% | |
| TTCCTAGGAATAGCATTCCT+TGG | + | chr4.3:195883-195902 | MS.gene047008:intron | 40.0% | |
| TTCGATGACAGGAGAATCTT+TGG | - | chr4.3:192629-192648 | None:intergenic | 40.0% | |
| TTCTTGGAGAGATATATGCC+AGG | + | chr4.3:192887-192906 | MS.gene047008:CDS | 40.0% | |
| TTGGTACGCTTGAAACAAAC+AGG | - | chr4.3:195858-195877 | None:intergenic | 40.0% | |
| ! | AAAACCGATTTAACTGGGTG+CGG | + | chr4.3:195002-195021 | MS.gene047008:intron | 40.0% |
| ! | AAATAGAGTTTTCGCAGGTG+GGG | + | chr4.3:195315-195334 | MS.gene047008:intron | 40.0% |
| ! | AACAGAAGGAGTCGACTTAA+AGG | - | chr4.3:196349-196368 | None:intergenic | 40.0% |
| ! | ATTTTACCCCCGATATGGTT+TGG | + | chr4.3:195392-195411 | MS.gene047008:intron | 40.0% |
| ! | CGGTTTTTCCCCGTTAAAAT+TGG | - | chr4.3:194989-195008 | None:intergenic | 40.0% |
| ! | CTCGCAAAGATTTTCCATCT+TGG | + | chr4.3:193376-193395 | MS.gene047008:CDS | 40.0% |
| ! | GAAGCACTCAGAAAGTCTAA+AGG | + | chr4.3:192685-192704 | MS.gene047008:CDS | 40.0% |
| ! | GAATAGGTCTTTTCAGAGAG+AGG | + | chr4.3:192366-192385 | MS.gene047008:CDS | 40.0% |
| ! | GCCCTAGAAGCATACTTAAA+AGG | + | chr4.3:194232-194251 | MS.gene047008:CDS | 40.0% |
| ! | GGGGAAAAACCGATTTAACT+GGG | + | chr4.3:194997-195016 | MS.gene047008:intron | 40.0% |
| ! | GTCGGTCTCTTTTACTACTT+TGG | + | chr4.3:192778-192797 | MS.gene047008:CDS | 40.0% |
| ! | TCAGTGTTAGGGTTTTTGTG+GGG | + | chr4.3:192344-192363 | MS.gene047008:CDS | 40.0% |
| ! | TCCAGGAACATTTTATACCC+GGG | + | chr4.3:196036-196055 | MS.gene047008:intron | 40.0% |
| ! | TGGATTTTTAATACGGAGGC+GGG | + | chr4.3:195039-195058 | MS.gene047008:intron | 40.0% |
| ! | TTAGGGTTTTTGTGGGGAAT+AGG | + | chr4.3:192350-192369 | MS.gene047008:CDS | 40.0% |
| ! | TTGCAAATTCGGTTCGAAAC+CGG | - | chr4.3:193707-193726 | None:intergenic | 40.0% |
| ! | TTTTACCCCCGATATGGTTT+GGG | + | chr4.3:195393-195412 | MS.gene047008:intron | 40.0% |
| !! | AATTTTAAAAAGCGGGTGCG+GGG | - | chr4.3:195097-195116 | None:intergenic | 40.0% |
| !! | CGCCTTTTAAGTATGCTTCT+AGG | - | chr4.3:194237-194256 | None:intergenic | 40.0% |
| !! | GATTTTGCACTGATGCAGAA+AGG | + | chr4.3:194380-194399 | MS.gene047008:CDS | 40.0% |
| !! | GTTGCTACGAAGTATTGTAG+CGG | - | chr4.3:194874-194893 | None:intergenic | 40.0% |
| !! | TGTGATCGTGAGTTTTTCAG+TGG | + | chr4.3:193614-193633 | MS.gene047008:intron | 40.0% |
| !! | TTCCTCTTTGAAGTCTTCCT+GGG | - | chr4.3:192051-192070 | None:intergenic | 40.0% |
| !! | TTGCTACGAAGTATTGTAGC+GGG | - | chr4.3:194873-194892 | None:intergenic | 40.0% |
| !! | TTTTACTACTTTGGCCTTCG+TGG | + | chr4.3:192787-192806 | MS.gene047008:CDS | 40.0% |
| !!! | TTGGGTTGAGAATGTGCTTT+TGG | + | chr4.3:196493-196512 | MS.gene047008:CDS | 40.0% |
| ACGCTTGAAACAAACAGGGT+GGG | - | chr4.3:195853-195872 | None:intergenic | 45.0% | |
| AGAGAGAGAAACAACTTGGG+TGG | - | chr4.3:191969-191988 | None:intergenic | 45.0% | |
| AGCAGAATAGAGGTGGTGTT+TGG | - | chr4.3:192968-192987 | None:intergenic | 45.0% | |
| AGTAACGCTTGGCTAGATGA+AGG | - | chr4.3:194734-194753 | None:intergenic | 45.0% | |
| ATTCCCAAAAGATGCCTCCT+AGG | - | chr4.3:193808-193827 | None:intergenic | 45.0% | |
| ATTGGGATTGGGATTGGGAT+TGG | - | chr4.3:192202-192221 | None:intergenic | 45.0% | |
| CAGAAAGTCTAAAGGGGAAG+AGG | + | chr4.3:192693-192712 | MS.gene047008:CDS | 45.0% | |
| CAGGCACACCAAGTTCATTA+GGG | - | chr4.3:196637-196656 | None:intergenic | 45.0% | |
| CATCTGGACAAAGAACTCCA+TGG | - | chr4.3:194211-194230 | None:intergenic | 45.0% | |
| CATGGAGTTCTTTGTCCAGA+TGG | + | chr4.3:194209-194228 | MS.gene047008:CDS | 45.0% | |
| CCAAATCGCCCTAATGAACT+TGG | + | chr4.3:196626-196645 | MS.gene047008:CDS | 45.0% | |
| CCAAGTTCATTAGGGCGATT+TGG | - | chr4.3:196629-196648 | None:intergenic | 45.0% | |
| CGAGATCTTCTTCGGATTTG+TGG | - | chr4.3:192133-192152 | None:intergenic | 45.0% | |
| CTCTTACAAGCTTGTGGGTT+CGG | + | chr4.3:194805-194824 | MS.gene047008:CDS | 45.0% | |
| CTGGGTGTCTTGTATCTCAA+AGG | + | chr4.3:193268-193287 | MS.gene047008:CDS | 45.0% | |
| CTTAAAAGGCGATGTTGGCA+AGG | + | chr4.3:194246-194265 | MS.gene047008:CDS | 45.0% | |
| CTTGGAGAGATATATGCCAG+GGG | + | chr4.3:192889-192908 | MS.gene047008:CDS | 45.0% | |
| CTTGTGTGAGTTACAGGCAA+AGG | + | chr4.3:193195-193214 | MS.gene047008:intron | 45.0% | |
| GAACCTGTTAGGCTACACAA+TGG | + | chr4.3:192646-192665 | MS.gene047008:CDS | 45.0% | |
| GATGGAAAATCTTTGCGAGC+TGG | - | chr4.3:193375-193394 | None:intergenic | 45.0% | |
| GCACAAGCCATGTTCAATCT+TGG | + | chr4.3:194672-194691 | MS.gene047008:CDS | 45.0% | |
| GCTGCTGCTATGTACAAAGT+CGG | + | chr4.3:192760-192779 | MS.gene047008:CDS | 45.0% | |
| GGATGCTAGGATCATAGAAG+AGG | + | chr4.3:192271-192290 | MS.gene047008:CDS | 45.0% | |
| GGTAAGTCTAGACATGGCAA+CGG | - | chr4.3:195464-195483 | None:intergenic | 45.0% | |
| GTAAGTCTAGACATGGCAAC+GGG | - | chr4.3:195463-195482 | None:intergenic | 45.0% | |
| GTACTCAAGAATGGCTGAGA+TGG | + | chr4.3:194279-194298 | MS.gene047008:CDS | 45.0% | |
| GTCTGATAGGACAATTCCAC+TGG | + | chr4.3:195756-195775 | MS.gene047008:intron | 45.0% | |
| GTTCAAGAAGAACGTTCCGT+TGG | + | chr4.3:193405-193424 | MS.gene047008:CDS | 45.0% | |
| GTTGGAGGCCATTATAACCT+GGG | + | chr4.3:193250-193269 | MS.gene047008:CDS | 45.0% | |
| TAAAAACCATTCCCGGGGAA+TGG | + | chr4.3:196170-196189 | MS.gene047008:intron | 45.0% | |
| TAAGTCTAGACATGGCAACG+GGG | - | chr4.3:195462-195481 | None:intergenic | 45.0% | |
| TACGCTTGAAACAAACAGGG+TGG | - | chr4.3:195854-195873 | None:intergenic | 45.0% | |
| TAGTTGCAGAAAGAGGTCCA+TGG | + | chr4.3:194191-194210 | MS.gene047008:CDS | 45.0% | |
| TCCCGGGTATAAAATGTTCC+TGG | - | chr4.3:196040-196059 | None:intergenic | 45.0% | |
| TCCTAACTGTGCTGTATCTG+CGG | + | chr4.3:196555-196574 | MS.gene047008:CDS | 45.0% | |
| TCTTGAACCCAACACCAAGA+TGG | - | chr4.3:193393-193412 | None:intergenic | 45.0% | |
| TGGTTGAGGGTTCGAAGATT+TGG | - | chr4.3:192172-192191 | None:intergenic | 45.0% | |
| TTATTACCATTCCCCGGGAA+TGG | - | chr4.3:196179-196198 | None:intergenic | 45.0% | |
| TTCCCAAAAGATGCCTCCTA+GGG | - | chr4.3:193807-193826 | None:intergenic | 45.0% | |
| TTCCCAGGAAGACTTCAAAG+AGG | + | chr4.3:192046-192065 | MS.gene047008:CDS | 45.0% | |
| TTGGCTAGATGAAGGTCAAG+AGG | - | chr4.3:194726-194745 | None:intergenic | 45.0% | |
| TTGGGATTGGGATTGGGATT+GGG | - | chr4.3:192201-192220 | None:intergenic | 45.0% | |
| TTTACCCCCGATATGGTTTG+GGG | + | chr4.3:195394-195413 | MS.gene047008:intron | 45.0% | |
| TTTATTGTGGCTGCCAACCA+CGG | + | chr4.3:193331-193350 | MS.gene047008:CDS | 45.0% | |
| TTTCCCCGTTAAAATTGGGG+CGG | - | chr4.3:194984-195003 | None:intergenic | 45.0% | |
| ! | AAACCGATTTAACTGGGTGC+GGG | + | chr4.3:195003-195022 | MS.gene047008:intron | 45.0% |
| ! | AAAGGCTGCTGATAACGAAG+AGG | + | chr4.3:193228-193247 | MS.gene047008:CDS | 45.0% |
| ! | AATAGAGTTTTCGCAGGTGG+GGG | + | chr4.3:195316-195335 | MS.gene047008:intron | 45.0% |
| ! | ACTGGCTCTTACAAGCTTGT+GGG | + | chr4.3:194800-194819 | MS.gene047008:CDS | 45.0% |
| ! | ACTTGGAGCGTTTGTCTGAT+AGG | + | chr4.3:195743-195762 | MS.gene047008:intron | 45.0% |
| ! | AGTCGACTTAAAGGCAAGTC+AGG | - | chr4.3:196340-196359 | None:intergenic | 45.0% |
| ! | ATCGGATTGGGATTGGGATT+GGG | - | chr4.3:192207-192226 | None:intergenic | 45.0% |
| ! | CGGGGAAAAACCGATTTAAC+TGG | + | chr4.3:194996-195015 | MS.gene047008:intron | 45.0% |
| ! | GAAGACAACTTGCTCTCTGT+AGG | + | chr4.3:193847-193866 | MS.gene047008:intron | 45.0% |
| ! | GATTTTTAATACGGAGGCGG+GGG | + | chr4.3:195041-195060 | MS.gene047008:intron | 45.0% |
| ! | GGATTTTTAATACGGAGGCG+GGG | + | chr4.3:195040-195059 | MS.gene047008:intron | 45.0% |
| ! | GGTTGAGAATGTGCTTTTGG+AGG | + | chr4.3:196496-196515 | MS.gene047008:CDS | 45.0% |
| ! | TATCGGATTGGGATTGGGAT+TGG | - | chr4.3:192208-192227 | None:intergenic | 45.0% |
| ! | TGTAGTTAAAGAGTGCACCG+TGG | - | chr4.3:194558-194577 | None:intergenic | 45.0% |
| ! | TTTGAGGCGTGACCATTCTA+AGG | + | chr4.3:192810-192829 | MS.gene047008:CDS | 45.0% |
| !! | ACCATGAGAGTGCCTTAGAA+TGG | - | chr4.3:192825-192844 | None:intergenic | 45.0% |
| !! | ACCATTCTAAGGCACTCTCA+TGG | + | chr4.3:192821-192840 | MS.gene047008:CDS | 45.0% |
| !! | CTTCCTCTTTGAAGTCTTCC+TGG | - | chr4.3:192052-192071 | None:intergenic | 45.0% |
| !! | CTTTGAAGTCTTCCTGGGAA+AGG | - | chr4.3:192046-192065 | None:intergenic | 45.0% |
| !! | CTTTGAGATACAAGACACCC+AGG | - | chr4.3:193270-193289 | None:intergenic | 45.0% |
| !! | GAGAATGTGCTTTTGGAGGA+GGG | + | chr4.3:196500-196519 | MS.gene047008:CDS | 45.0% |
| !! | TGAGAATGTGCTTTTGGAGG+AGG | + | chr4.3:196499-196518 | MS.gene047008:CDS | 45.0% |
| !! | TAAATAAAAATAATATTCAT+TGG | - | chr4.3:196288-196307 | None:intergenic | 5.0% |
| !!! | AATTTTTTAATAATAATCAA+AGG | + | chr4.3:195817-195836 | MS.gene047008:intron | 5.0% |
| !!! | ATTTTTTAATAATAATCAAA+GGG | + | chr4.3:195818-195837 | MS.gene047008:intron | 5.0% |
| AAGAGGAATCGGAATCAGCG+GGG | - | chr4.3:192076-192095 | None:intergenic | 50.0% | |
| AAGATCTCGATCCTGGCTCA+TGG | + | chr4.3:192144-192163 | MS.gene047008:CDS | 50.0% | |
| ACACCCGCACCCAGTTAAAT+CGG | - | chr4.3:195009-195028 | None:intergenic | 50.0% | |
| AGAAAGCCTTTGGTTGACCG+TGG | - | chr4.3:193351-193370 | None:intergenic | 50.0% | |
| AGCAGCAGCATTCCCTTTCT+GGG | - | chr4.3:192749-192768 | None:intergenic | 50.0% | |
| AGCATGTGCATGGGTGAATC+TGG | + | chr4.3:194358-194377 | MS.gene047008:CDS | 50.0% | |
| AGCCTAACAGGTTCGATGAC+AGG | - | chr4.3:192640-192659 | None:intergenic | 50.0% | |
| AGCTAAGTTGCCAGTCACAC+TGG | + | chr4.3:194782-194801 | MS.gene047008:CDS | 50.0% | |
| AGCTAATGACAGGGGATGCT+AGG | + | chr4.3:192258-192277 | MS.gene047008:CDS | 50.0% | |
| AGCTGTTGTTGTAGCTGGAG+AGG | + | chr4.3:196595-196614 | MS.gene047008:CDS | 50.0% | |
| AGGATCATAGAAGAGGGCTC+CGG | + | chr4.3:192278-192297 | MS.gene047008:CDS | 50.0% | |
| AGGCAAGCTGTTGTTGTAGC+TGG | + | chr4.3:196590-196609 | MS.gene047008:CDS | 50.0% | |
| ATCAGCGGGCACATTCTTTG+TGG | + | chr4.3:194404-194423 | MS.gene047008:CDS | 50.0% | |
| ATTTAACTGGGTGCGGGTGT+GGG | + | chr4.3:195009-195028 | MS.gene047008:intron | 50.0% | |
| CATCACTTTGCTTCAGAGGG+TGG | + | chr4.3:192413-192432 | MS.gene047008:intron | 50.0% | |
| CCAAGAAGTTCCATAGAGCG+AGG | - | chr4.3:192874-192893 | None:intergenic | 50.0% | |
| CCGTCGCTAAGCTAATGACA+GGG | + | chr4.3:192249-192268 | MS.gene047008:CDS | 50.0% | |
| CCTAACTGTGCTGTATCTGC+GGG | + | chr4.3:196556-196575 | MS.gene047008:CDS | 50.0% | |
| CCTCGCTCTATGGAACTTCT+TGG | + | chr4.3:192871-192890 | MS.gene047008:CDS | 50.0% | |
| CGGCTGCACAATCAGTGTTA+GGG | + | chr4.3:192333-192352 | MS.gene047008:CDS | 50.0% | |
| CGTCGCTAAGCTAATGACAG+GGG | + | chr4.3:192250-192269 | MS.gene047008:CDS | 50.0% | |
| CTCCTGTCATCGAACCTGTT+AGG | + | chr4.3:192635-192654 | MS.gene047008:CDS | 50.0% | |
| CTTATGTCAGGGAACTGCCA+GGG | + | chr4.3:194599-194618 | MS.gene047008:intron | 50.0% | |
| CTTGAACCATTCACACCCCT+AGG | + | chr4.3:193788-193807 | MS.gene047008:intron | 50.0% | |
| CTTGGGTACATGCATGAGCA+TGG | + | chr4.3:194690-194709 | MS.gene047008:CDS | 50.0% | |
| CTTGTAAGAGCCAGTGTGAC+TGG | - | chr4.3:194795-194814 | None:intergenic | 50.0% | |
| GAAGAGGAATCGGAATCAGC+GGG | - | chr4.3:192077-192096 | None:intergenic | 50.0% | |
| GAAGGTCAAGAGGAAGTCCT+TGG | - | chr4.3:194716-194735 | None:intergenic | 50.0% | |
| GCAGATACAGCACAGTTAGG+AGG | - | chr4.3:196556-196575 | None:intergenic | 50.0% | |
| GCAGGCACACCAAGTTCATT+AGG | - | chr4.3:196638-196657 | None:intergenic | 50.0% | |
| GCCAGGATCGAGATCTTCTT+CGG | - | chr4.3:192141-192160 | None:intergenic | 50.0% | |
| GCGTCTCAGTTACCTCAACA+TGG | + | chr4.3:194943-194962 | MS.gene047008:intron | 50.0% | |
| GCTCCATTGTGTAGCCTAAC+AGG | - | chr4.3:192652-192671 | None:intergenic | 50.0% | |
| GGAAGAGGAATCGGAATCAG+CGG | - | chr4.3:192078-192097 | None:intergenic | 50.0% | |
| GGAGAACGAAGCATGTGCAT+GGG | + | chr4.3:194349-194368 | MS.gene047008:CDS | 50.0% | |
| GGCACTCTCATGGTTCCTTA+AGG | + | chr4.3:192831-192850 | MS.gene047008:CDS | 50.0% | |
| GGTTGGAGGCCATTATAACC+TGG | + | chr4.3:193249-193268 | MS.gene047008:CDS | 50.0% | |
| GTCACCGAATTCATCCCACT+CGG | - | chr4.3:192102-192121 | None:intergenic | 50.0% | |
| TACATGCATGAGCATGGCCA+AGG | + | chr4.3:194696-194715 | MS.gene047008:CDS | 50.0% | |
| TAGCAGCAGCATTCCCTTTC+TGG | - | chr4.3:192750-192769 | None:intergenic | 50.0% | |
| TCCCAAAAGATGCCTCCTAG+GGG | - | chr4.3:193806-193825 | None:intergenic | 50.0% | |
| TCCGAAGAAGATCTCGATCC+TGG | + | chr4.3:192137-192156 | MS.gene047008:CDS | 50.0% | |
| TCGAGTATCAGGCCCAGAAA+GGG | + | chr4.3:192734-192753 | MS.gene047008:CDS | 50.0% | |
| TCTTATGTCAGGGAACTGCC+AGG | + | chr4.3:194598-194617 | MS.gene047008:intron | 50.0% | |
| TGAGTTGCTGCCCACTACAT+TGG | - | chr4.3:195636-195655 | None:intergenic | 50.0% | |
| TGGAGAACGAAGCATGTGCA+TGG | + | chr4.3:194348-194367 | MS.gene047008:CDS | 50.0% | |
| TGGGAAAGGACGAGAACGTA+GGG | - | chr4.3:192032-192051 | None:intergenic | 50.0% | |
| TGGGATTGGGATTGGGATTG+GGG | - | chr4.3:192200-192219 | None:intergenic | 50.0% | |
| TTCCCCGTTAAAATTGGGGC+GGG | - | chr4.3:194983-195002 | None:intergenic | 50.0% | |
| TTCCTTAAGGCCGTCGACAA+AGG | + | chr4.3:192844-192863 | MS.gene047008:CDS | 50.0% | |
| ! | ACTTTGGCCTTCGTGGTTTG+AGG | + | chr4.3:192794-192813 | MS.gene047008:CDS | 50.0% |
| ! | AGTTAGGAGGCACGCAAAGA+GGG | - | chr4.3:196543-196562 | None:intergenic | 50.0% |
| ! | CCCTGTCATTAGCTTAGCGA+CGG | - | chr4.3:192252-192271 | None:intergenic | 50.0% |
| ! | CCTAACACTGATTGTGCAGC+CGG | - | chr4.3:192335-192354 | None:intergenic | 50.0% |
| ! | CGGCTTTTGTTGCCATGTTG+AGG | - | chr4.3:194958-194977 | None:intergenic | 50.0% |
| ! | CTAACACTGATTGTGCAGCC+GGG | - | chr4.3:192334-192353 | None:intergenic | 50.0% |
| ! | GCCGGGTATGTGATTGACTT+TGG | + | chr4.3:194491-194510 | MS.gene047008:intron | 50.0% |
| ! | GCTGATAACGAAGAGGTTGG+AGG | + | chr4.3:193235-193254 | MS.gene047008:CDS | 50.0% |
| ! | GCTGCTGATAACGAAGAGGT+TGG | + | chr4.3:193232-193251 | MS.gene047008:CDS | 50.0% |
| ! | GTCGGTATCGGATTGGGATT+GGG | - | chr4.3:192213-192232 | None:intergenic | 50.0% |
| ! | TCTGTAGGAGCATAGCTCTG+TGG | + | chr4.3:193862-193881 | MS.gene047008:intron | 50.0% |
| ! | TGCAGCTGTTTCAATCTCGC+CGG | - | chr4.3:192300-192319 | None:intergenic | 50.0% |
| ! | TGTCATTAGCTTAGCGACGG+CGG | - | chr4.3:192249-192268 | None:intergenic | 50.0% |
| !! | AATGGCTGAGATGGGCTATG+AGG | + | chr4.3:194288-194307 | MS.gene047008:CDS | 50.0% |
| !! | CACTGGCTCTTACAAGCTTG+TGG | + | chr4.3:194799-194818 | MS.gene047008:CDS | 50.0% |
| !! | CTGATGCAGAAAGGCATCAG+CGG | + | chr4.3:194389-194408 | MS.gene047008:CDS | 50.0% |
| !! | GTAGTAGAGAGCGTCGGTAT+CGG | - | chr4.3:192225-192244 | None:intergenic | 50.0% |
| !! | TGATGCAGAAAGGCATCAGC+GGG | + | chr4.3:194390-194409 | MS.gene047008:CDS | 50.0% |
| !!! | ACCCCTAGGAGGCATCTTTT+GGG | + | chr4.3:193802-193821 | MS.gene047008:intron | 50.0% |
| AAGATTTGGCGCCATGAGCC+AGG | - | chr4.3:192158-192177 | None:intergenic | 55.0% | |
| ACCGAATTCATCCCACTCGG+CGG | - | chr4.3:192099-192118 | None:intergenic | 55.0% | |
| AGCAGCTCGGTCATAATCCC+TGG | - | chr4.3:194619-194638 | None:intergenic | 55.0% | |
| AGCCTTTGGTTGACCGTGGT+TGG | - | chr4.3:193347-193366 | None:intergenic | 55.0% | |
| AGCGGGCACATTCTTTGTGG+TGG | + | chr4.3:194407-194426 | MS.gene047008:CDS | 55.0% | |
| AGCTGCAGAATCTGGTCACC+CGG | + | chr4.3:192313-192332 | MS.gene047008:CDS | 55.0% | |
| ATCTGCGGGAGAGGCAAAGA+AGG | + | chr4.3:196570-196589 | MS.gene047008:CDS | 55.0% | |
| CAAAGGAGAGCCTCGCTCTA+TGG | + | chr4.3:192861-192880 | MS.gene047008:CDS | 55.0% | |
| CCATCCCCAAACCATATCGG+GGG | - | chr4.3:195401-195420 | None:intergenic | 55.0% | |
| CCCATCCCCAAACCATATCG+GGG | - | chr4.3:195402-195421 | None:intergenic | 55.0% | |
| CCCCATCCCCAAACCATATC+GGG | - | chr4.3:195403-195422 | None:intergenic | 55.0% | |
| CCCCCATCCCCAAACCATAT+CGG | - | chr4.3:195404-195423 | None:intergenic | 55.0% | |
| CCCGCAGATACAGCACAGTT+AGG | - | chr4.3:196559-196578 | None:intergenic | 55.0% | |
| CCGGCTGCACAATCAGTGTT+AGG | + | chr4.3:192332-192351 | MS.gene047008:CDS | 55.0% | |
| CTACGTTCTCGTCCTTTCCC+AGG | + | chr4.3:192031-192050 | MS.gene047008:CDS | 55.0% | |
| CTCCTTTGTCGACGGCCTTA+AGG | - | chr4.3:192849-192868 | None:intergenic | 55.0% | |
| CTCGAGTATCAGGCCCAGAA+AGG | + | chr4.3:192733-192752 | MS.gene047008:CDS | 55.0% | |
| CTGGGAAAGGACGAGAACGT+AGG | - | chr4.3:192033-192052 | None:intergenic | 55.0% | |
| GAACCATTCACACCCCTAGG+AGG | + | chr4.3:193791-193810 | MS.gene047008:intron | 55.0% | |
| GAGATATATGCCAGGGGAGC+AGG | + | chr4.3:192895-192914 | MS.gene047008:CDS | 55.0% | |
| GATTTAACTGGGTGCGGGTG+TGG | + | chr4.3:195008-195027 | MS.gene047008:intron | 55.0% | |
| GCATGTAAGCCTCAGCAGCT+CGG | - | chr4.3:194632-194651 | None:intergenic | 55.0% | |
| GCCGTCGCTAAGCTAATGAC+AGG | + | chr4.3:192248-192267 | MS.gene047008:CDS | 55.0% | |
| GCGAGCTGGTAGAAAGCCTT+TGG | - | chr4.3:193361-193380 | None:intergenic | 55.0% | |
| GGATTATGACCGAGCTGCTG+AGG | + | chr4.3:194620-194639 | MS.gene047008:CDS | 55.0% | |
| GGGATTGGGATTGGGATTGG+GGG | - | chr4.3:192199-192218 | None:intergenic | 55.0% | |
| GTGACTGGCAACTTAGCTGC+AGG | - | chr4.3:194780-194799 | None:intergenic | 55.0% | |
| TCCCCGTTAAAATTGGGGCG+GGG | - | chr4.3:194982-195001 | None:intergenic | 55.0% | |
| TCCGCCGAGTGGGATGAATT+CGG | + | chr4.3:192095-192114 | MS.gene047008:CDS | 55.0% | |
| TGCCAACCACGGTCAACCAA+AGG | + | chr4.3:193342-193361 | MS.gene047008:CDS | 55.0% | |
| TGGCACAGAGCAATGCTGCT+TGG | + | chr4.3:194311-194330 | MS.gene047008:CDS | 55.0% | |
| TGGTGGCAAGCTTCTGAGCA+GGG | + | chr4.3:194424-194443 | MS.gene047008:CDS | 55.0% | |
| TTGGGATTGGGATTGGGGGT+CGG | - | chr4.3:192195-192214 | None:intergenic | 55.0% | |
| TTTAAAAAGCGGGTGCGGGG+CGG | - | chr4.3:195094-195113 | None:intergenic | 55.0% | |
| TTTAACTGGGTGCGGGTGTG+GGG | + | chr4.3:195010-195029 | MS.gene047008:intron | 55.0% | |
| ! | ATATGGTTTGGGGATGGGGG+CGG | + | chr4.3:195404-195423 | MS.gene047008:intron | 55.0% |
| ! | ATGCCTCCTAGGGGTGTGAA+TGG | - | chr4.3:193797-193816 | None:intergenic | 55.0% |
| ! | CAGTTAGGAGGCACGCAAAG+AGG | - | chr4.3:196544-196563 | None:intergenic | 55.0% |
| ! | CCCCGATATGGTTTGGGGAT+GGG | + | chr4.3:195399-195418 | MS.gene047008:intron | 55.0% |
| ! | CCCGATATGGTTTGGGGATG+GGG | + | chr4.3:195400-195419 | MS.gene047008:intron | 55.0% |
| ! | CCGATATGGTTTGGGGATGG+GGG | + | chr4.3:195401-195420 | MS.gene047008:intron | 55.0% |
| ! | CGTCGGTATCGGATTGGGAT+TGG | - | chr4.3:192214-192233 | None:intergenic | 55.0% |
| !! | AGAGAGCGTCGGTATCGGAT+TGG | - | chr4.3:192220-192239 | None:intergenic | 55.0% |
| !! | GAGAGCGTCGGTATCGGATT+GGG | - | chr4.3:192219-192238 | None:intergenic | 55.0% |
| !! | GTATGCTTCTAGGGCCCATC+TGG | - | chr4.3:194227-194246 | None:intergenic | 55.0% |
| !!! | CACCCCTAGGAGGCATCTTT+TGG | + | chr4.3:193801-193820 | MS.gene047008:intron | 55.0% |
| ACATGGCAACGGGGCAGATC+GGG | - | chr4.3:195453-195472 | None:intergenic | 60.0% | |
| CCACTCGGCGGAAGAGGAAT+CGG | - | chr4.3:192087-192106 | None:intergenic | 60.0% | |
| CCCCGTTAAAATTGGGGCGG+GGG | - | chr4.3:194981-195000 | None:intergenic | 60.0% | |
| CGATTCCTCTTCCGCCGAGT+GGG | + | chr4.3:192085-192104 | MS.gene047008:CDS | 60.0% | |
| CGTTAAAATTGGGGCGGGGG+CGG | - | chr4.3:194978-194997 | None:intergenic | 60.0% | |
| CTGTGCTGTATCTGCGGGAG+AGG | + | chr4.3:196561-196580 | MS.gene047008:CDS | 60.0% | |
| GACATGGCAACGGGGCAGAT+CGG | - | chr4.3:195454-195473 | None:intergenic | 60.0% | |
| GACGAGAACGTAGGGACGAG+CGG | - | chr4.3:192024-192043 | None:intergenic | 60.0% | |
| GATTGGGGGTCGGTGGTTGA+GGG | - | chr4.3:192185-192204 | None:intergenic | 60.0% | |
| GCGAGGCTCTCCTTTGTCGA+CGG | - | chr4.3:192857-192876 | None:intergenic | 60.0% | |
| GGTCACGCCTCAAACCACGA+AGG | - | chr4.3:192804-192823 | None:intergenic | 60.0% | |
| GTGCGGGTGTGGGGGAAATT+TGG | + | chr4.3:195019-195038 | MS.gene047008:intron | 60.0% | |
| GTGGTGGCAAGCTTCTGAGC+AGG | + | chr4.3:194423-194442 | MS.gene047008:CDS | 60.0% | |
| TCTCTCAACACCTGCTCCCC+TGG | - | chr4.3:192908-192927 | None:intergenic | 60.0% | |
| TTAAAAAGCGGGTGCGGGGC+GGG | - | chr4.3:195093-195112 | None:intergenic | 60.0% | |
| TTAACTGGGTGCGGGTGTGG+GGG | + | chr4.3:195011-195030 | MS.gene047008:intron | 60.0% | |
| TTCATCCCACTCGGCGGAAG+AGG | - | chr4.3:192093-192112 | None:intergenic | 60.0% | |
| ! | AGAGTTTTCGCAGGTGGGGG+CGG | + | chr4.3:195319-195338 | MS.gene047008:intron | 60.0% |
| ! | CCCCCGATATGGTTTGGGGA+TGG | + | chr4.3:195398-195417 | MS.gene047008:intron | 60.0% |
| ! | CGCCCCCGCCCCAATTTTAA+CGG | + | chr4.3:194976-194995 | MS.gene047008:intron | 60.0% |
| ! | GGCGGAGTAGTAGAGAGCGT+CGG | - | chr4.3:192231-192250 | None:intergenic | 60.0% |
| ! | TATGGTTTGGGGATGGGGGC+GGG | + | chr4.3:195405-195424 | MS.gene047008:intron | 60.0% |
| !! | CCCCCGCCCCAATTTTAACG+GGG | + | chr4.3:194978-194997 | MS.gene047008:intron | 60.0% |
| !! | GCCCCCGCCCCAATTTTAAC+GGG | + | chr4.3:194977-194996 | MS.gene047008:intron | 60.0% |
| !! | GGCTGAGATGGGCTATGAGG+TGG | + | chr4.3:194291-194310 | MS.gene047008:CDS | 60.0% |
| AACGTAGGGACGAGCGGCGA+CGG | - | chr4.3:192018-192037 | None:intergenic | 65.0% | |
| ATGGCAACGGGGCAGATCGG+GGG | - | chr4.3:195451-195470 | None:intergenic | 65.0% | |
| CATGGCAACGGGGCAGATCG+GGG | - | chr4.3:195452-195471 | None:intergenic | 65.0% | |
| CCGATTCCTCTTCCGCCGAG+TGG | + | chr4.3:192084-192103 | MS.gene047008:CDS | 65.0% | |
| GGATTGGGATTGGGGGTCGG+TGG | - | chr4.3:192192-192211 | None:intergenic | 65.0% | |
| GGATTGGGGGTCGGTGGTTG+AGG | - | chr4.3:192186-192205 | None:intergenic | 65.0% | |
| TAAAAAGCGGGTGCGGGGCG+GGG | - | chr4.3:195092-195111 | None:intergenic | 65.0% | |
| ! | AGTTTTCGCAGGTGGGGGCG+GGG | + | chr4.3:195321-195340 | MS.gene047008:intron | 65.0% |
| ! | ATGGTTTGGGGATGGGGGCG+GGG | + | chr4.3:195406-195425 | MS.gene047008:intron | 65.0% |
| ! | GAGTTTTCGCAGGTGGGGGC+GGG | + | chr4.3:195320-195339 | MS.gene047008:intron | 65.0% |
| AAAAAGCGGGTGCGGGGCGG+GGG | - | chr4.3:195091-195110 | None:intergenic | 70.0% | |
| AACCCCGCCCCCAATGGGGA+CGG | - | chr4.3:195362-195381 | None:intergenic | 70.0% | |
| ACACCCAACCCCGCCCCCAA+TGG | - | chr4.3:195368-195387 | None:intergenic | 70.0% | |
| ACCCAACCCCGCCCCCAATG+GGG | - | chr4.3:195366-195385 | None:intergenic | 70.0% | |
| AGACCCGTCCCCATTGGGGG+CGG | + | chr4.3:195355-195374 | MS.gene047008:intron | 70.0% | |
| CACCCAACCCCGCCCCCAAT+GGG | - | chr4.3:195367-195386 | None:intergenic | 70.0% | |
| CCCAATGGGGACGGGTCTCC+CGG | - | chr4.3:195353-195372 | None:intergenic | 70.0% | |
| CCGGGAGACCCGTCCCCATT+GGG | + | chr4.3:195350-195369 | MS.gene047008:intron | 70.0% | |
| CGGGAGACCCGTCCCCATTG+GGG | + | chr4.3:195351-195370 | MS.gene047008:intron | 70.0% | |
| GGGAGACCCGTCCCCATTGG+GGG | + | chr4.3:195352-195371 | MS.gene047008:intron | 70.0% | |
| TCCCCATTGGGGGCGGGGTT+GGG | + | chr4.3:195362-195381 | MS.gene047008:intron | 70.0% | |
| ! | GTTTTCGCAGGTGGGGGCGG+GGG | + | chr4.3:195322-195341 | MS.gene047008:intron | 70.0% |
| ! | TGGTTTGGGGATGGGGGCGG+GGG | + | chr4.3:195407-195426 | MS.gene047008:intron | 70.0% |
| ACCCCGCCCCCAATGGGGAC+GGG | - | chr4.3:195361-195380 | None:intergenic | 75.0% | |
| ACCCGTCCCCATTGGGGGCG+GGG | + | chr4.3:195357-195376 | MS.gene047008:intron | 75.0% | |
| AGGGACGAGCGGCGACGGAG+AGG | - | chr4.3:192013-192032 | None:intergenic | 75.0% | |
| CAACGGGGCAGATCGGGGGC+GGG | - | chr4.3:195447-195466 | None:intergenic | 75.0% | |
| GACCCGTCCCCATTGGGGGC+GGG | + | chr4.3:195356-195375 | MS.gene047008:intron | 75.0% | |
| GCAACGGGGCAGATCGGGGG+CGG | - | chr4.3:195448-195467 | None:intergenic | 75.0% | |
| GCCGGGAGACCCGTCCCCAT+TGG | + | chr4.3:195349-195368 | MS.gene047008:intron | 75.0% | |
| GGGACGAGCGGCGACGGAGA+GGG | - | chr4.3:192012-192031 | None:intergenic | 75.0% | |
| GTCCCCATTGGGGGCGGGGT+TGG | + | chr4.3:195361-195380 | MS.gene047008:intron | 75.0% | |
| TTTGGGGATGGGGGCGGGGG+CGG | + | chr4.3:195410-195429 | MS.gene047008:intron | 75.0% | |
| ! | TTCGCAGGTGGGGGCGGGGG+CGG | + | chr4.3:195325-195344 | MS.gene047008:intron | 80.0% |
| ! | TTGGGGATGGGGGCGGGGGC+GGG | + | chr4.3:195411-195430 | MS.gene047008:intron | 80.0% |
| ! | AAGCGGGTGCGGGGCGGGGG+TGG | - | chr4.3:195088-195107 | None:intergenic | 85.0% |
| ! | AGCGGGTGCGGGGCGGGGGT+GGG | - | chr4.3:195087-195106 | None:intergenic | 85.0% |
| ! | GCGGGGCGGGGGTGGGTGCA+GGG | - | chr4.3:195080-195099 | None:intergenic | 85.0% |
| ! | GGGCGGGGGTGGGTGCAGGG+CGG | - | chr4.3:195077-195096 | None:intergenic | 85.0% |
| ! | TCGCAGGTGGGGGCGGGGGC+GGG | + | chr4.3:195326-195345 | MS.gene047008:intron | 85.0% |
| ! | TGCGGGGCGGGGGTGGGTGC+AGG | - | chr4.3:195081-195100 | None:intergenic | 85.0% |
| ! | TGGGGATGGGGGCGGGGGCG+GGG | + | chr4.3:195412-195431 | MS.gene047008:intron | 85.0% |
| ! | CGCAGGTGGGGGCGGGGGCG+GGG | + | chr4.3:195327-195346 | MS.gene047008:intron | 90.0% |
| ! | GGTGGGGGCGGGGGCGGGGC+CGG | + | chr4.3:195331-195350 | MS.gene047008:intron | 95.0% |
| ! | GTGGGGGCGGGGGCGGGGCC+GGG | + | chr4.3:195332-195351 | MS.gene047008:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 191963 | 196667 | 191963 | ID=MS.gene047008 |
| chr4.3 | mRNA | 191963 | 196667 | 191963 | ID=MS.gene047008.t1;Parent=MS.gene047008 |
| chr4.3 | exon | 191963 | 192406 | 191963 | ID=MS.gene047008.t1.exon1;Parent=MS.gene047008.t1 |
| chr4.3 | CDS | 191963 | 192406 | 191963 | ID=cds.MS.gene047008.t1;Parent=MS.gene047008.t1 |
| chr4.3 | exon | 192559 | 193050 | 192559 | ID=MS.gene047008.t1.exon2;Parent=MS.gene047008.t1 |
| chr4.3 | CDS | 192559 | 193050 | 192559 | ID=cds.MS.gene047008.t1;Parent=MS.gene047008.t1 |
| chr4.3 | exon | 193211 | 193426 | 193211 | ID=MS.gene047008.t1.exon3;Parent=MS.gene047008.t1 |
| chr4.3 | CDS | 193211 | 193426 | 193211 | ID=cds.MS.gene047008.t1;Parent=MS.gene047008.t1 |
| chr4.3 | exon | 194172 | 194495 | 194172 | ID=MS.gene047008.t1.exon4;Parent=MS.gene047008.t1 |
| chr4.3 | CDS | 194172 | 194495 | 194172 | ID=cds.MS.gene047008.t1;Parent=MS.gene047008.t1 |
| chr4.3 | exon | 194609 | 194851 | 194609 | ID=MS.gene047008.t1.exon5;Parent=MS.gene047008.t1 |
| chr4.3 | CDS | 194609 | 194851 | 194609 | ID=cds.MS.gene047008.t1;Parent=MS.gene047008.t1 |
| chr4.3 | exon | 196446 | 196667 | 196446 | ID=MS.gene047008.t1.exon6;Parent=MS.gene047008.t1 |
| chr4.3 | CDS | 196446 | 196667 | 196446 | ID=cds.MS.gene047008.t1;Parent=MS.gene047008.t1 |
| Gene Sequence |
| Protein sequence |
