Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047701.t1 | XP_003611854.2 | 94.9 | 455 | 23 | 0 | 1 | 455 | 1 | 455 | 9.20E-207 | 729.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047701.t1 | Q66HD3 | 29.3 | 116 | 80 | 1 | 207 | 320 | 504 | 619 | 8.3e-07 | 56.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047701.t1 | G7K9G9 | 94.9 | 455 | 23 | 0 | 1 | 455 | 1 | 455 | 6.6e-207 | 729.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68716 | MS.gene047701 | PPI |
| MS.gene014181 | MS.gene047701 | PPI |
| MS.gene68113 | MS.gene047701 | PPI |
| MS.gene063067 | MS.gene047701 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047701.t1 | MTR_5g018600 | 95.604 | 455 | 20 | 0 | 1 | 455 | 1 | 455 | 0.0 | 815 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047701.t1 | AT4G37210 | 50.117 | 429 | 168 | 10 | 57 | 452 | 74 | 489 | 2.12e-120 | 360 |
| MS.gene047701.t1 | AT4G37210 | 50.318 | 314 | 123 | 4 | 57 | 349 | 74 | 375 | 7.91e-90 | 278 |
Find 122 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGGAAGCCGTTGCTTATT+TGG | 0.172827 | 5.3:+10494469 | MS.gene047701:CDS |
| ATCTCAGCGAGAATTGATTT+TGG | 0.224515 | 5.3:-10494760 | None:intergenic |
| ACCAAAATCATTCTCCTTCA+TGG | 0.252070 | 5.3:-10491866 | None:intergenic |
| ATCAACAGAGTTGCCCATTA+TGG | 0.268360 | 5.3:+10492886 | MS.gene047701:intron |
| GCCATGAAGGAGAATGATTT+TGG | 0.276030 | 5.3:+10491865 | MS.gene047701:CDS |
| TGGAGACTCCTCCTGCTTCT+TGG | 0.302677 | 5.3:-10493004 | None:intergenic |
| ATCTTCCTGGTCGTTCTTAC+CGG | 0.304993 | 5.3:-10493854 | None:intergenic |
| CCTCCAAACACAAGCATATA+CGG | 0.321319 | 5.3:-10494433 | None:intergenic |
| TATCAACTTGTTCCATAGTA+TGG | 0.325848 | 5.3:-10493990 | None:intergenic |
| CGGGAGCAAGTTCACCATAA+TGG | 0.339759 | 5.3:-10492900 | None:intergenic |
| CACTATCCTCATCATCTTCC+TGG | 0.352582 | 5.3:-10493867 | None:intergenic |
| TCTTCGGTTGTTTCTAATGC+TGG | 0.357966 | 5.3:-10495003 | None:intergenic |
| GGAGACTCCTCCTGCTTCTT+GGG | 0.358489 | 5.3:-10493003 | None:intergenic |
| GTCCACACATACTACAAATA+TGG | 0.368782 | 5.3:+10492928 | MS.gene047701:CDS |
| CTGGTTCAACCAGCTGTTCT+AGG | 0.369035 | 5.3:-10494189 | None:intergenic |
| TTTCCGTATATGCTTGTGTT+TGG | 0.380312 | 5.3:+10494430 | MS.gene047701:CDS |
| CGCAGGTCTCTCAAGTGAAC+TGG | 0.386407 | 5.3:+10494619 | MS.gene047701:CDS |
| TTCCTTTCCACTGCCTGCCT+TGG | 0.387277 | 5.3:-10494794 | None:intergenic |
| AGACGAGTCTGACCTGGATT+TGG | 0.388595 | 5.3:+10493918 | MS.gene047701:CDS |
| AAAGCAATCTGTCCATACTA+TGG | 0.392176 | 5.3:+10493978 | MS.gene047701:CDS |
| TCAGGAGGAAGCCGATCCTT+TGG | 0.393753 | 5.3:+10492972 | MS.gene047701:CDS |
| GGGAGCAAGTTCACCATAAT+GGG | 0.399197 | 5.3:-10492899 | None:intergenic |
| TCAGCAATGTTTCTATCATC+TGG | 0.400267 | 5.3:-10494208 | None:intergenic |
| GGATTCCACGGCGGGGTTGA+CGG | 0.406936 | 5.3:-10491758 | None:intergenic |
| CAGGAGGAAGCCGATCCTTT+GGG | 0.407516 | 5.3:+10492973 | MS.gene047701:CDS |
| CTAGGATGGATAGAGCCTTC+TGG | 0.419799 | 5.3:-10494171 | None:intergenic |
| GTCACACATCTTGGTGTAGT+AGG | 0.440218 | 5.3:+10494922 | MS.gene047701:CDS |
| GTTGCGGCGGATTCCACGGC+GGG | 0.447328 | 5.3:-10491766 | None:intergenic |
| AGACTTCTGACCGTCGCTGC+TGG | 0.447523 | 5.3:-10491803 | None:intergenic |
| CCGTATATGCTTGTGTTTGG+AGG | 0.449286 | 5.3:+10494433 | MS.gene047701:CDS |
| GGCTGATGAGCTGATGGAAA+AGG | 0.453203 | 5.3:+10491834 | MS.gene047701:CDS |
| CGCAATTGAGTTATTAGTCT+CGG | 0.463063 | 5.3:-10494570 | None:intergenic |
| ATAGCCGTGCTCTTGAGATC+AGG | 0.468923 | 5.3:+10491905 | MS.gene047701:CDS |
| CTTCACAGGTCCATCTTTGT+CGG | 0.471230 | 5.3:-10493034 | None:intergenic |
| GTGGTTTAGGGTTCCGTCGA+CGG | 0.471495 | 5.3:-10491719 | None:intergenic |
| AAATAAGCAACGGCTTCCTC+AGG | 0.479407 | 5.3:-10494467 | None:intergenic |
| GAAGGCTACATCTGTTTGTA+AGG | 0.480775 | 5.3:+10494493 | MS.gene047701:CDS |
| GTGACAGGTTCGGTTGGTTG+AGG | 0.484148 | 5.3:-10491694 | None:intergenic |
| AACATTGGCAGATGTTGCTC+TGG | 0.486208 | 5.3:+10494020 | MS.gene047701:CDS |
| CAGCGACGGTCAGAAGTCTC+TGG | 0.488675 | 5.3:+10491807 | MS.gene047701:CDS |
| CATTATCCACTTCTGACTCC+TGG | 0.495772 | 5.3:-10493128 | None:intergenic |
| CTCAAGTGAACTGGAAAAGA+AGG | 0.499187 | 5.3:+10494628 | MS.gene047701:CDS |
| GCTCACACCAATGGATCTGC+TGG | 0.500908 | 5.3:+10494898 | MS.gene047701:CDS |
| CAGGAGTCAGAAGTGGATAA+TGG | 0.501825 | 5.3:+10493129 | MS.gene047701:CDS |
| GGGTGCTGTTCCCAAGAAGC+AGG | 0.502021 | 5.3:+10492993 | MS.gene047701:CDS |
| GTTCCGTCGACGGCTGTGAC+AGG | 0.511248 | 5.3:-10491709 | None:intergenic |
| CCACATGGCGCCGACAAAGA+TGG | 0.513330 | 5.3:+10493024 | MS.gene047701:CDS |
| TCTGCTGGAGTCACACATCT+TGG | 0.516862 | 5.3:+10494913 | MS.gene047701:CDS |
| TCTATCCATCCTAGAACAGC+TGG | 0.517147 | 5.3:+10494180 | MS.gene047701:CDS |
| GTCGACGGCTGTGACAGGTT+CGG | 0.517732 | 5.3:-10491704 | None:intergenic |
| GCATTCATAGCACCCTTCAC+AGG | 0.519577 | 5.3:-10493048 | None:intergenic |
| ATTGGTGTGAGCGGTTGAAA+TGG | 0.519732 | 5.3:-10494887 | None:intergenic |
| CGACAAAGATGGACCTGTGA+AGG | 0.523351 | 5.3:+10493035 | MS.gene047701:CDS |
| TGCACTGTTATACAAGGCTC+AGG | 0.523635 | 5.3:+10492954 | MS.gene047701:CDS |
| TGATGAAGACGAGTCTGACC+TGG | 0.523764 | 5.3:+10493912 | MS.gene047701:CDS |
| GTGTGAGCGGTTGAAATGGT+TGG | 0.526499 | 5.3:-10494883 | None:intergenic |
| GCATCTGCCAAGGCAGGCAG+TGG | 0.528560 | 5.3:+10494787 | MS.gene047701:CDS |
| ATTCTAGCATCTGCCAAGGC+AGG | 0.536075 | 5.3:+10494781 | MS.gene047701:CDS |
| ATCCGCCGCAACTTCTGCTC+CGG | 0.538164 | 5.3:+10491777 | MS.gene047701:CDS |
| AGCCGTTGCTTATTTGGAGA+AGG | 0.538307 | 5.3:+10494475 | MS.gene047701:CDS |
| GGACATGGCTGATGAGCTGA+TGG | 0.539014 | 5.3:+10491828 | MS.gene047701:CDS |
| TGACCGTCGCTGCTGGACGC+CGG | 0.541151 | 5.3:-10491796 | None:intergenic |
| AGTTGGAGTTTCTTCAACCA+TGG | 0.544227 | 5.3:-10491647 | None:intergenic |
| GGATAGTGATACTGAAGAGT+TGG | 0.545697 | 5.3:+10493882 | MS.gene047701:CDS |
| TCACACATCTTGGTGTAGTA+GGG | 0.546130 | 5.3:+10494923 | MS.gene047701:CDS |
| GCAGATGTTGCTCTGGAAAG+AGG | 0.547971 | 5.3:+10494027 | MS.gene047701:CDS |
| CGGTCAGAAGTCTCTGGACA+TGG | 0.548472 | 5.3:+10491813 | MS.gene047701:CDS |
| AGAAGTTGCGGCGGATTCCA+CGG | 0.555375 | 5.3:-10491770 | None:intergenic |
| TTCAACCAGCTGTTCTAGGA+TGG | 0.560558 | 5.3:-10494185 | None:intergenic |
| AAAGGGAAACAAGGCCATGA+AGG | 0.561352 | 5.3:+10491852 | MS.gene047701:CDS |
| CCATCTTTGTCGGCGCCATG+TGG | 0.566588 | 5.3:-10493024 | None:intergenic |
| ATTTCAACCGCTCACACCAA+TGG | 0.569574 | 5.3:+10494889 | MS.gene047701:CDS |
| GTAGTATGTGTGGACACACT+CGG | 0.570065 | 5.3:-10492920 | None:intergenic |
| AACCATATTTGTAGTATGTG+TGG | 0.571397 | 5.3:-10492930 | None:intergenic |
| AATGCTTGCTTCTGCCACGC+TGG | 0.573158 | 5.3:-10494971 | None:intergenic |
| CATCTTGGTGTAGTAGGGAG+AGG | 0.573263 | 5.3:+10494928 | MS.gene047701:CDS |
| TGTGACTCCAGCAGATCCAT+TGG | 0.573283 | 5.3:-10494905 | None:intergenic |
| GCTCCGGCGTCCAGCAGCGA+CGG | 0.574197 | 5.3:+10491793 | MS.gene047701:CDS |
| ACGGCTGTGACAGGTTCGGT+TGG | 0.577242 | 5.3:-10491700 | None:intergenic |
| ACGGAAGTCTCAGATGCAGT+TGG | 0.578153 | 5.3:-10491664 | None:intergenic |
| GGGAACAGCACCCAAAGGAT+CGG | 0.585670 | 5.3:-10492983 | None:intergenic |
| AGCAGATCCATTGGTGTGAG+CGG | 0.586600 | 5.3:-10494896 | None:intergenic |
| AAGAGTGAGCTCCTCACAGT+TGG | 0.588916 | 5.3:+10494828 | MS.gene047701:CDS |
| GCTGATGAGCTGATGGAAAA+GGG | 0.592738 | 5.3:+10491835 | MS.gene047701:CDS |
| AAACAACCAGGAGTCAGAAG+TGG | 0.594428 | 5.3:+10493122 | MS.gene047701:CDS |
| GAACCTGTCACAGCCGTCGA+CGG | 0.603391 | 5.3:+10491706 | MS.gene047701:CDS |
| GGACGCCGGAGCAGAAGTTG+CGG | 0.603423 | 5.3:-10491782 | None:intergenic |
| TGGTTGTGCACTGTTATACA+AGG | 0.606143 | 5.3:+10492948 | MS.gene047701:CDS |
| TGCCAAGGCAGGCAGTGGAA+AGG | 0.606956 | 5.3:+10494792 | MS.gene047701:CDS |
| AGTCTGACCTGGATTTGGCA+TGG | 0.608986 | 5.3:+10493923 | MS.gene047701:CDS |
| CGCCGGAGCAGAAGTTGCGG+CGG | 0.609161 | 5.3:-10491779 | None:intergenic |
| GAGCTCACTCTTGCTAGAGA+TGG | 0.609882 | 5.3:-10494817 | None:intergenic |
| GACAAAGATGGACCTGTGAA+GGG | 0.610152 | 5.3:+10493036 | MS.gene047701:CDS |
| TAGTATGTGTGGACACACTC+GGG | 0.612826 | 5.3:-10492919 | None:intergenic |
| TTCCACGGCGGGGTTGACGG+TGG | 0.613242 | 5.3:-10491755 | None:intergenic |
| GGAGGTTAGTTCAAAACCTG+AGG | 0.614213 | 5.3:+10494451 | MS.gene047701:CDS |
| TTCTTGGGAACAGCACCCAA+AGG | 0.615458 | 5.3:-10492988 | None:intergenic |
| GAACGACCAGGAAGATGATG+AGG | 0.618052 | 5.3:+10493861 | MS.gene047701:CDS |
| CGAGACTAATAACTCAATTG+CGG | 0.622926 | 5.3:+10494571 | MS.gene047701:CDS |
| ATTGCTTGCAAAAGATGCAG+TGG | 0.625303 | 5.3:-10493079 | None:intergenic |
| AGTTGATATACTATCAACAT+TGG | 0.628260 | 5.3:+10494005 | MS.gene047701:CDS |
| GCAGAAATTGAAACTCTCGC+AGG | 0.629007 | 5.3:+10494602 | MS.gene047701:CDS |
| GCTGATGGAAAAGGGAAACA+AGG | 0.630536 | 5.3:+10491843 | MS.gene047701:CDS |
| AGCCTTCTCCAAATAAGCAA+CGG | 0.630794 | 5.3:-10494477 | None:intergenic |
| GGTTGGTTGAGGCATTGTGA+CGG | 0.637516 | 5.3:-10491683 | None:intergenic |
| AACCACCGTCAACCCCGCCG+TGG | 0.638823 | 5.3:+10491753 | MS.gene047701:CDS |
| TTGGCTACAGAGAACAGCAG+TGG | 0.641006 | 5.3:+10494847 | MS.gene047701:CDS |
| TGAACCTGATCTCAAGAGCA+CGG | 0.642142 | 5.3:-10491909 | None:intergenic |
| GATACTGAAGAGTTGGCAGA+AGG | 0.643075 | 5.3:+10493889 | MS.gene047701:CDS |
| ATCTCTCTCTGACTACCAGA+AGG | 0.643674 | 5.3:+10494156 | MS.gene047701:CDS |
| ACAACCGAAGAGAAAAGTGA+TGG | 0.651076 | 5.3:+10495015 | MS.gene047701:CDS |
| AAGCAGGAGGAGTCTCCACA+TGG | 0.654637 | 5.3:+10493009 | MS.gene047701:CDS |
| GGACGTGACTTCAAACAACC+AGG | 0.655621 | 5.3:+10493110 | MS.gene047701:CDS |
| ACTGTTATACAAGGCTCAGG+AGG | 0.655923 | 5.3:+10492957 | MS.gene047701:CDS |
| ACCGAAGAGAAAAGTGATGG+TGG | 0.656455 | 5.3:+10495018 | MS.gene047701:CDS |
| TGCTGTTCCCAAGAAGCAGG+AGG | 0.664556 | 5.3:+10492996 | MS.gene047701:CDS |
| TGAGATTCTAGCATCTGCCA+AGG | 0.664765 | 5.3:+10494777 | MS.gene047701:CDS |
| AGTTGCGGCGGATTCCACGG+CGG | 0.675466 | 5.3:-10491767 | None:intergenic |
| AGTGTCCGGTAAGAACGACC+AGG | 0.691630 | 5.3:+10493849 | MS.gene047701:intron |
| GCGATCATCAAATGCCAGCG+TGG | 0.691972 | 5.3:+10494957 | MS.gene047701:CDS |
| GTTCTCTGTAGCCAACTGTG+AGG | 0.704965 | 5.3:-10494839 | None:intergenic |
| TTGCGGCGGATTCCACGGCG+GGG | 0.708348 | 5.3:-10491765 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAATAAATGTAAGA+TGG | - | chr5.3:10494061-10494080 | None:intergenic | 10.0% |
| !!! | TTTTTTATTAACATTTAAAC+AGG | - | chr5.3:10494292-10494311 | None:intergenic | 10.0% |
| !! | ATTAATAATTTCTCCAATTT+AGG | + | chr5.3:10494353-10494372 | MS.gene047701:intron | 15.0% |
| !! | TTAGTTATCATAACAATATT+GGG | + | chr5.3:10492674-10492693 | MS.gene047701:intron | 15.0% |
| !!! | TAATATCTGAAATTTGAAAT+AGG | + | chr5.3:10492604-10492623 | MS.gene047701:intron | 15.0% |
| !!! | TATGTTATTTTGATATAACA+TGG | + | chr5.3:10494690-10494709 | MS.gene047701:intron | 15.0% |
| !!! | TTTTTTTTTAACAACAATTC+AGG | - | chr5.3:10493612-10493631 | None:intergenic | 15.0% |
| !! | CTTAGTTATCATAACAATAT+TGG | + | chr5.3:10492673-10492692 | MS.gene047701:intron | 20.0% |
| !! | TATTAATTGATGAAACGAAA+TGG | + | chr5.3:10492568-10492587 | MS.gene047701:intron | 20.0% |
| !! | TCAAAATAATAATCATGACA+AGG | - | chr5.3:10494241-10494260 | None:intergenic | 20.0% |
| !!! | AATAGATAGAAAGTGTTTTA+TGG | + | chr5.3:10493291-10493310 | MS.gene047701:intron | 20.0% |
| !!! | ACATATAATTGATTTGTACA+TGG | - | chr5.3:10492796-10492815 | None:intergenic | 20.0% |
| !!! | ACTAAAATGAGAACATTTTA+CGG | + | chr5.3:10493187-10493206 | MS.gene047701:intron | 20.0% |
| !!! | ATAGACATTTTATTCTCAAA+AGG | + | chr5.3:10492486-10492505 | MS.gene047701:intron | 20.0% |
| !!! | ATTTCTTATTTCACAAGTTA+AGG | - | chr5.3:10494411-10494430 | None:intergenic | 20.0% |
| !!! | CATATAATTGATTTGTACAT+GGG | - | chr5.3:10492795-10492814 | None:intergenic | 20.0% |
| !!! | GATCTTTAGGTTAAATTATT+GGG | + | chr5.3:10492030-10492049 | MS.gene047701:intron | 20.0% |
| !!! | TGATCTTTAGGTTAAATTAT+TGG | + | chr5.3:10492029-10492048 | MS.gene047701:intron | 20.0% |
| ! | CATAGCTTATGCAAAAAAAA+TGG | + | chr5.3:10492287-10492306 | MS.gene047701:intron | 25.0% |
| ! | TAAATTATTGGGAATTGAGT+TGG | + | chr5.3:10492041-10492060 | MS.gene047701:intron | 25.0% |
| ! | TCTAAAAGTTGAATTGTTTC+TGG | + | chr5.3:10494104-10494123 | MS.gene047701:intron | 25.0% |
| ! | TTCCACATAAATAGAGAATA+AGG | - | chr5.3:10493352-10493371 | None:intergenic | 25.0% |
| ! | TTCCTTATTCTCTATTTATG+TGG | + | chr5.3:10493347-10493366 | MS.gene047701:intron | 25.0% |
| ! | TTGATATAACATGGAATGTA+TGG | + | chr5.3:10494699-10494718 | MS.gene047701:intron | 25.0% |
| !! | AGTTGATATACTATCAACAT+TGG | + | chr5.3:10494005-10494024 | MS.gene047701:CDS | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+TGG | + | chr5.3:10492381-10492400 | MS.gene047701:intron | 25.0% |
| !! | CTAAAAGTTGAATTGTTTCT+GGG | + | chr5.3:10494105-10494124 | MS.gene047701:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACT+GGG | + | chr5.3:10492382-10492401 | MS.gene047701:intron | 25.0% |
| !!! | AAATGTTCTCATTTTAGTGA+AGG | - | chr5.3:10493185-10493204 | None:intergenic | 25.0% |
| !!! | AACAATTCAACTTTTAGAAC+TGG | - | chr5.3:10494102-10494121 | None:intergenic | 25.0% |
| !!! | AAGATGTTATTGTCTTGTTT+TGG | + | chr5.3:10492419-10492438 | MS.gene047701:intron | 25.0% |
| !!! | ACAATTCAACTTTTAGAACT+GGG | - | chr5.3:10494101-10494120 | None:intergenic | 25.0% |
| !!! | ACTATTTCTTTCACTTTTCT+TGG | + | chr5.3:10493742-10493761 | MS.gene047701:intron | 25.0% |
| !!! | ATGGCAATGTTTTTAATGAA+AGG | + | chr5.3:10493310-10493329 | MS.gene047701:intron | 25.0% |
| !!! | TGGCAATGTTTTTAATGAAA+GGG | + | chr5.3:10493311-10493330 | MS.gene047701:intron | 25.0% |
| !!! | TTTTTTAACAACAATTCAGG+AGG | - | chr5.3:10493609-10493628 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGCATAAGCTATG+TGG | - | chr5.3:10492287-10492306 | None:intergenic | 25.0% |
| AACAATATTGGGAAACTCTT+TGG | + | chr5.3:10492685-10492704 | MS.gene047701:intron | 30.0% | |
| AACCATATTTGTAGTATGTG+TGG | - | chr5.3:10492933-10492952 | None:intergenic | 30.0% | |
| AAGGAAAAAATTCCCTGATT+AGG | - | chr5.3:10493450-10493469 | None:intergenic | 30.0% | |
| ACGTAAAATGCTTTAACCAT+GGG | - | chr5.3:10493568-10493587 | None:intergenic | 30.0% | |
| AGCTTAATTGTGAATGAAAC+TGG | - | chr5.3:10492130-10492149 | None:intergenic | 30.0% | |
| AGGAAAAAATTCCCTGATTA+GGG | - | chr5.3:10493449-10493468 | None:intergenic | 30.0% | |
| CTATAATCAAGCAATTAAGC+AGG | - | chr5.3:10492470-10492489 | None:intergenic | 30.0% | |
| GCTTAATTGTGAATGAAACT+GGG | - | chr5.3:10492129-10492148 | None:intergenic | 30.0% | |
| TAACATCTTACTATAGTGCA+TGG | - | chr5.3:10492408-10492427 | None:intergenic | 30.0% | |
| TAATCACCTAAGTTGTAGTT+TGG | + | chr5.3:10493781-10493800 | MS.gene047701:intron | 30.0% | |
| TACGTAAAATGCTTTAACCA+TGG | - | chr5.3:10493569-10493588 | None:intergenic | 30.0% | |
| TATTTGACATGATGAGTAGA+AGG | - | chr5.3:10493272-10493291 | None:intergenic | 30.0% | |
| TGTATGATATTAATCTGCGT+TGG | + | chr5.3:10493229-10493248 | MS.gene047701:intron | 30.0% | |
| TTTGCTAGCTATCACAAATA+TGG | - | chr5.3:10493694-10493713 | None:intergenic | 30.0% | |
| ! | CTGAAATTTGAAATAGGTCA+GGG | + | chr5.3:10492610-10492629 | MS.gene047701:intron | 30.0% |
| ! | GTGGTTTTCATTAGTTATCT+TGG | - | chr5.3:10492268-10492287 | None:intergenic | 30.0% |
| ! | TATCAACTTGTTCCATAGTA+TGG | - | chr5.3:10493993-10494012 | None:intergenic | 30.0% |
| ! | TCTGAAATTTGAAATAGGTC+AGG | + | chr5.3:10492609-10492628 | MS.gene047701:intron | 30.0% |
| ! | TGAAATTTGAAATAGGTCAG+GGG | + | chr5.3:10492611-10492630 | MS.gene047701:intron | 30.0% |
| ! | TGAGAACATTTTACGGAATT+TGG | + | chr5.3:10493194-10493213 | MS.gene047701:intron | 30.0% |
| !! | AGTAAACAGTTGATAACTCA+AGG | - | chr5.3:10493383-10493402 | None:intergenic | 30.0% |
| !! | CCAATGCTTTCGTATTTTAA+AGG | - | chr5.3:10492159-10492178 | None:intergenic | 30.0% |
| !! | CCTTTAAAATACGAAAGCAT+TGG | + | chr5.3:10492156-10492175 | MS.gene047701:intron | 30.0% |
| !!! | CAATTCAACTTTTAGAACTG+GGG | - | chr5.3:10494100-10494119 | None:intergenic | 30.0% |
| AAAAACACCTCCTGAATTGT+TGG | + | chr5.3:10493631-10493650 | MS.gene047701:intron | 35.0% | |
| AAAAATGAAATCTCTGCTGG+TGG | - | chr5.3:10492749-10492768 | None:intergenic | 35.0% | |
| AAAACACCTCCTGAATTGTT+GGG | + | chr5.3:10493632-10493651 | MS.gene047701:intron | 35.0% | |
| AAAATGAAATCTCTGCTGGT+GGG | - | chr5.3:10492748-10492767 | None:intergenic | 35.0% | |
| AAAGCAATCTGTCCATACTA+TGG | + | chr5.3:10493978-10493997 | MS.gene047701:CDS | 35.0% | |
| AAATAGGTCAGGGGTTATTA+TGG | + | chr5.3:10492620-10492639 | MS.gene047701:intron | 35.0% | |
| AACATTCAAACGTTCTTGTG+TGG | - | chr5.3:10492819-10492838 | None:intergenic | 35.0% | |
| ACCAAAATCATTCTCCTTCA+TGG | - | chr5.3:10491869-10491888 | None:intergenic | 35.0% | |
| AGAGATGTTTCAAAATCCTC+TGG | - | chr5.3:10494142-10494161 | None:intergenic | 35.0% | |
| ATGCGTTGAGTTTGATCTTT+AGG | + | chr5.3:10492017-10492036 | MS.gene047701:intron | 35.0% | |
| CAACTGTTTACTCAAGACAT+AGG | + | chr5.3:10493391-10493410 | MS.gene047701:intron | 35.0% | |
| CACAATTGGTCATCCTAAAT+TGG | - | chr5.3:10494369-10494388 | None:intergenic | 35.0% | |
| CGAGACTAATAACTCAATTG+CGG | + | chr5.3:10494571-10494590 | MS.gene047701:CDS | 35.0% | |
| GACAAAAATGAAATCTCTGC+TGG | - | chr5.3:10492752-10492771 | None:intergenic | 35.0% | |
| GTCCACACATACTACAAATA+TGG | + | chr5.3:10492928-10492947 | MS.gene047701:CDS | 35.0% | |
| GTTTACTCAAGACATAGGAT+AGG | + | chr5.3:10493396-10493415 | MS.gene047701:intron | 35.0% | |
| TTGAAATGTGAAACAGTGTC+CGG | + | chr5.3:10493835-10493854 | MS.gene047701:intron | 35.0% | |
| TTTCCGTATATGCTTGTGTT+TGG | + | chr5.3:10494430-10494449 | MS.gene047701:CDS | 35.0% | |
| ! | CGCAATTGAGTTATTAGTCT+CGG | - | chr5.3:10494573-10494592 | None:intergenic | 35.0% |
| ! | TCAGCAATGTTTCTATCATC+TGG | - | chr5.3:10494211-10494230 | None:intergenic | 35.0% |
| ! | TGCATGTTCTCAGTGTTTTA+TGG | + | chr5.3:10492077-10492096 | MS.gene047701:intron | 35.0% |
| ! | TTTTGCAAGCAATATTGAGC+AGG | + | chr5.3:10493089-10493108 | MS.gene047701:CDS | 35.0% |
| !! | ATCTCAGCGAGAATTGATTT+TGG | - | chr5.3:10494763-10494782 | None:intergenic | 35.0% |
| !! | GACAGATTGCTTTTCAACAA+TGG | - | chr5.3:10493971-10493990 | None:intergenic | 35.0% |
| !! | TCTCAGCGAGAATTGATTTT+GGG | - | chr5.3:10494762-10494781 | None:intergenic | 35.0% |
| ACAACCGAAGAGAAAAGTGA+TGG | + | chr5.3:10495015-10495034 | MS.gene047701:CDS | 40.0% | |
| ACCCTAAACCACGACAAAAA+CGG | + | chr5.3:10491730-10491749 | MS.gene047701:CDS | 40.0% | |
| AGCCTTCTCCAAATAAGCAA+CGG | - | chr5.3:10494480-10494499 | None:intergenic | 40.0% | |
| ATCAACAGAGTTGCCCATTA+TGG | + | chr5.3:10492886-10492905 | MS.gene047701:intron | 40.0% | |
| ATGCACACGTATCAAAGAGA+AGG | - | chr5.3:10493469-10493488 | None:intergenic | 40.0% | |
| ATTGCTTGCAAAAGATGCAG+TGG | - | chr5.3:10493082-10493101 | None:intergenic | 40.0% | |
| CATGAATGGCACTTATTGTG+GGG | + | chr5.3:10493486-10493505 | MS.gene047701:intron | 40.0% | |
| CCGCATCAAAACAAAACGTA+GGG | + | chr5.3:10492182-10492201 | MS.gene047701:intron | 40.0% | |
| CCTCCAAACACAAGCATATA+CGG | - | chr5.3:10494436-10494455 | None:intergenic | 40.0% | |
| CTCAAGTGAACTGGAAAAGA+AGG | + | chr5.3:10494628-10494647 | MS.gene047701:CDS | 40.0% | |
| CTTTGATACGTGTGCATGAA+TGG | + | chr5.3:10493472-10493491 | MS.gene047701:intron | 40.0% | |
| GAAGGCTACATCTGTTTGTA+AGG | + | chr5.3:10494493-10494512 | MS.gene047701:CDS | 40.0% | |
| GCATGAATGGCACTTATTGT+GGG | + | chr5.3:10493485-10493504 | MS.gene047701:intron | 40.0% | |
| GGATAGTGATACTGAAGAGT+TGG | + | chr5.3:10493882-10493901 | MS.gene047701:CDS | 40.0% | |
| TGCATGAATGGCACTTATTG+TGG | + | chr5.3:10493484-10493503 | MS.gene047701:intron | 40.0% | |
| TGGTTGTGCACTGTTATACA+AGG | + | chr5.3:10492948-10492967 | MS.gene047701:CDS | 40.0% | |
| TGTCAACCTGATGCTCTTAT+AGG | + | chr5.3:10492768-10492787 | MS.gene047701:intron | 40.0% | |
| TTCTCGCCAAACTACAACTT+AGG | - | chr5.3:10493790-10493809 | None:intergenic | 40.0% | |
| TTGAGATCAGGTTCAATTCG+TGG | + | chr5.3:10491917-10491936 | MS.gene047701:intron | 40.0% | |
| ! | ATGTTTTCTGTGCCCTAATC+AGG | + | chr5.3:10493434-10493453 | MS.gene047701:intron | 40.0% |
| ! | GCCATGAAGGAGAATGATTT+TGG | + | chr5.3:10491865-10491884 | MS.gene047701:CDS | 40.0% |
| ! | TCACACATCTTGGTGTAGTA+GGG | + | chr5.3:10494923-10494942 | MS.gene047701:CDS | 40.0% |
| ! | TGTTTTCTGTGCCCTAATCA+GGG | + | chr5.3:10493435-10493454 | MS.gene047701:intron | 40.0% |
| !! | TCCGTTTTTGTCGTGGTTTA+GGG | - | chr5.3:10491734-10491753 | None:intergenic | 40.0% |
| !! | TCTTCGGTTGTTTCTAATGC+TGG | - | chr5.3:10495006-10495025 | None:intergenic | 40.0% |
| !! | TTCCGTTTTTGTCGTGGTTT+AGG | - | chr5.3:10491735-10491754 | None:intergenic | 40.0% |
| !!! | CCCTACGTTTTGTTTTGATG+CGG | - | chr5.3:10492185-10492204 | None:intergenic | 40.0% |
| !!! | CCTACGTTTTGTTTTGATGC+GGG | - | chr5.3:10492184-10492203 | None:intergenic | 40.0% |
| !!! | GTTTTGGCTAATTCTGTGCT+AGG | + | chr5.3:10492435-10492454 | MS.gene047701:intron | 40.0% |
| AAACAACCAGGAGTCAGAAG+TGG | + | chr5.3:10493122-10493141 | MS.gene047701:CDS | 45.0% | |
| AAAGGGAAACAAGGCCATGA+AGG | + | chr5.3:10491852-10491871 | MS.gene047701:CDS | 45.0% | |
| AAATAAGCAACGGCTTCCTC+AGG | - | chr5.3:10494470-10494489 | None:intergenic | 45.0% | |
| AACAAAACGTAGGGCCTGTT+TGG | + | chr5.3:10492191-10492210 | MS.gene047701:intron | 45.0% | |
| AACATTGGCAGATGTTGCTC+TGG | + | chr5.3:10494020-10494039 | MS.gene047701:CDS | 45.0% | |
| AAGTTAAGGCTGTCTAGCAG+TGG | - | chr5.3:10494397-10494416 | None:intergenic | 45.0% | |
| ACCGAAGAGAAAAGTGATGG+TGG | + | chr5.3:10495018-10495037 | MS.gene047701:CDS | 45.0% | |
| ACTGTTATACAAGGCTCAGG+AGG | + | chr5.3:10492957-10492976 | MS.gene047701:CDS | 45.0% | |
| AGAACTGGGGTAGAGAGAAT+TGG | - | chr5.3:10494087-10494106 | None:intergenic | 45.0% | |
| AGCCGTTGCTTATTTGGAGA+AGG | + | chr5.3:10494475-10494494 | MS.gene047701:CDS | 45.0% | |
| AGGGCCTGTTTGGATTGTTT+GGG | + | chr5.3:10492201-10492220 | MS.gene047701:intron | 45.0% | |
| AGGTCAGGGGTTATTATGGA+TGG | + | chr5.3:10492624-10492643 | MS.gene047701:intron | 45.0% | |
| ATCTCTCTCTGACTACCAGA+AGG | + | chr5.3:10494156-10494175 | MS.gene047701:CDS | 45.0% | |
| ATCTTCCTGGTCGTTCTTAC+CGG | - | chr5.3:10493857-10493876 | None:intergenic | 45.0% | |
| ATTGGTGTGAGCGGTTGAAA+TGG | - | chr5.3:10494890-10494909 | None:intergenic | 45.0% | |
| ATTTCAACCGCTCACACCAA+TGG | + | chr5.3:10494889-10494908 | MS.gene047701:CDS | 45.0% | |
| CACTATCCTCATCATCTTCC+TGG | - | chr5.3:10493870-10493889 | None:intergenic | 45.0% | |
| CAGGAGTCAGAAGTGGATAA+TGG | + | chr5.3:10493129-10493148 | MS.gene047701:CDS | 45.0% | |
| CATTATCCACTTCTGACTCC+TGG | - | chr5.3:10493131-10493150 | None:intergenic | 45.0% | |
| CCCGCATCAAAACAAAACGT+AGG | + | chr5.3:10492181-10492200 | MS.gene047701:intron | 45.0% | |
| CCGTATATGCTTGTGTTTGG+AGG | + | chr5.3:10494433-10494452 | MS.gene047701:CDS | 45.0% | |
| CTTCACAGGTCCATCTTTGT+CGG | - | chr5.3:10493037-10493056 | None:intergenic | 45.0% | |
| GACAAAGATGGACCTGTGAA+GGG | + | chr5.3:10493036-10493055 | MS.gene047701:CDS | 45.0% | |
| GATACTGAAGAGTTGGCAGA+AGG | + | chr5.3:10493889-10493908 | MS.gene047701:CDS | 45.0% | |
| GCAGAAATTGAAACTCTCGC+AGG | + | chr5.3:10494602-10494621 | MS.gene047701:CDS | 45.0% | |
| GCTGATGAGCTGATGGAAAA+GGG | + | chr5.3:10491835-10491854 | MS.gene047701:CDS | 45.0% | |
| GCTGATGGAAAAGGGAAACA+AGG | + | chr5.3:10491843-10491862 | MS.gene047701:CDS | 45.0% | |
| GGCTAATTCTGTGCTAGGAA+TGG | + | chr5.3:10492440-10492459 | MS.gene047701:intron | 45.0% | |
| GGGAGCAAGTTCACCATAAT+GGG | - | chr5.3:10492902-10492921 | None:intergenic | 45.0% | |
| GTAGTATGTGTGGACACACT+CGG | - | chr5.3:10492923-10492942 | None:intergenic | 45.0% | |
| GTCTCCCAAACAATCCAAAC+AGG | - | chr5.3:10492208-10492227 | None:intergenic | 45.0% | |
| GTGTCTACTCCCAACAATTC+AGG | - | chr5.3:10493644-10493663 | None:intergenic | 45.0% | |
| TAGGGCCTGTTTGGATTGTT+TGG | + | chr5.3:10492200-10492219 | MS.gene047701:intron | 45.0% | |
| TAGTATGTGTGGACACACTC+GGG | - | chr5.3:10492922-10492941 | None:intergenic | 45.0% | |
| TCTACTCCCAACAATTCAGG+AGG | - | chr5.3:10493641-10493660 | None:intergenic | 45.0% | |
| TCTATCCATCCTAGAACAGC+TGG | + | chr5.3:10494180-10494199 | MS.gene047701:CDS | 45.0% | |
| TGAACCTGATCTCAAGAGCA+CGG | - | chr5.3:10491912-10491931 | None:intergenic | 45.0% | |
| TGAGATTCTAGCATCTGCCA+AGG | + | chr5.3:10494777-10494796 | MS.gene047701:CDS | 45.0% | |
| TGAGGAAGCCGTTGCTTATT+TGG | + | chr5.3:10494469-10494488 | MS.gene047701:CDS | 45.0% | |
| TGCACTGTTATACAAGGCTC+AGG | + | chr5.3:10492954-10492973 | MS.gene047701:CDS | 45.0% | |
| ! | GCATTTTCCATGCCAAATCC+AGG | - | chr5.3:10493933-10493952 | None:intergenic | 45.0% |
| ! | GGAGGTTAGTTCAAAACCTG+AGG | + | chr5.3:10494451-10494470 | MS.gene047701:CDS | 45.0% |
| ! | GTCACACATCTTGGTGTAGT+AGG | + | chr5.3:10494922-10494941 | MS.gene047701:CDS | 45.0% |
| ! | TAGCAGTGGAAGAGCACAAT+TGG | - | chr5.3:10494383-10494402 | None:intergenic | 45.0% |
| !! | ATGGGTCCTATAAGAGCATC+AGG | - | chr5.3:10492777-10492796 | None:intergenic | 45.0% |
| !! | GCCACCATCACTTTTCTCTT+CGG | - | chr5.3:10495022-10495041 | None:intergenic | 45.0% |
| !! | TTCAACCAGCTGTTCTAGGA+TGG | - | chr5.3:10494188-10494207 | None:intergenic | 45.0% |
| !!! | CTGGGATCTGTTTTTTCCAG+AGG | + | chr5.3:10494123-10494142 | MS.gene047701:intron | 45.0% |
| AAGAGTGAGCTCCTCACAGT+TGG | + | chr5.3:10494828-10494847 | MS.gene047701:CDS | 50.0% | |
| ACGGAAGTCTCAGATGCAGT+TGG | - | chr5.3:10491667-10491686 | None:intergenic | 50.0% | |
| AGACGAGTCTGACCTGGATT+TGG | + | chr5.3:10493918-10493937 | MS.gene047701:CDS | 50.0% | |
| AGCAGATCCATTGGTGTGAG+CGG | - | chr5.3:10494899-10494918 | None:intergenic | 50.0% | |
| AGTCTGACCTGGATTTGGCA+TGG | + | chr5.3:10493923-10493942 | MS.gene047701:CDS | 50.0% | |
| ATAGCCGTGCTCTTGAGATC+AGG | + | chr5.3:10491905-10491924 | MS.gene047701:CDS | 50.0% | |
| ATTCTAGCATCTGCCAAGGC+AGG | + | chr5.3:10494781-10494800 | MS.gene047701:CDS | 50.0% | |
| CGACAAAGATGGACCTGTGA+AGG | + | chr5.3:10493035-10493054 | MS.gene047701:CDS | 50.0% | |
| CGGGAGCAAGTTCACCATAA+TGG | - | chr5.3:10492903-10492922 | None:intergenic | 50.0% | |
| CTAGGATGGATAGAGCCTTC+TGG | - | chr5.3:10494174-10494193 | None:intergenic | 50.0% | |
| CTATAGTGCATGGCCCAGTT+TGG | - | chr5.3:10492398-10492417 | None:intergenic | 50.0% | |
| CTGGTTCAACCAGCTGTTCT+AGG | - | chr5.3:10494192-10494211 | None:intergenic | 50.0% | |
| GAACGACCAGGAAGATGATG+AGG | + | chr5.3:10493861-10493880 | MS.gene047701:CDS | 50.0% | |
| GAGCTCACTCTTGCTAGAGA+TGG | - | chr5.3:10494820-10494839 | None:intergenic | 50.0% | |
| GCATTCATAGCACCCTTCAC+AGG | - | chr5.3:10493051-10493070 | None:intergenic | 50.0% | |
| GGACGTGACTTCAAACAACC+AGG | + | chr5.3:10493110-10493129 | MS.gene047701:CDS | 50.0% | |
| GGCTGATGAGCTGATGGAAA+AGG | + | chr5.3:10491834-10491853 | MS.gene047701:CDS | 50.0% | |
| GTGTGAGCGGTTGAAATGGT+TGG | - | chr5.3:10494886-10494905 | None:intergenic | 50.0% | |
| GTTCTCTGTAGCCAACTGTG+AGG | - | chr5.3:10494842-10494861 | None:intergenic | 50.0% | |
| TCTGCTGGAGTCACACATCT+TGG | + | chr5.3:10494913-10494932 | MS.gene047701:CDS | 50.0% | |
| TGATGAAGACGAGTCTGACC+TGG | + | chr5.3:10493912-10493931 | MS.gene047701:CDS | 50.0% | |
| TGTGACTCCAGCAGATCCAT+TGG | - | chr5.3:10494908-10494927 | None:intergenic | 50.0% | |
| TTCTTGGGAACAGCACCCAA+AGG | - | chr5.3:10492991-10493010 | None:intergenic | 50.0% | |
| TTGGCTACAGAGAACAGCAG+TGG | + | chr5.3:10494847-10494866 | MS.gene047701:CDS | 50.0% | |
| ! | CATCTTGGTGTAGTAGGGAG+AGG | + | chr5.3:10494928-10494947 | MS.gene047701:CDS | 50.0% |
| ! | CATGGGCTTTTTGTACCCCA+CGG | - | chr5.3:10493551-10493570 | None:intergenic | 50.0% |
| !! | GCAGATGTTGCTCTGGAAAG+AGG | + | chr5.3:10494027-10494046 | MS.gene047701:CDS | 50.0% |
| !! | GGTTGGTTGAGGCATTGTGA+CGG | - | chr5.3:10491686-10491705 | None:intergenic | 50.0% |
| AAGCAGGAGGAGTCTCCACA+TGG | + | chr5.3:10493009-10493028 | MS.gene047701:CDS | 55.0% | |
| AATGCTTGCTTCTGCCACGC+TGG | - | chr5.3:10494974-10494993 | None:intergenic | 55.0% | |
| ACTCGAGTCTGTGACGTGTG+CGG | + | chr5.3:10493518-10493537 | MS.gene047701:intron | 55.0% | |
| AGTGTCCGGTAAGAACGACC+AGG | + | chr5.3:10493849-10493868 | MS.gene047701:intron | 55.0% | |
| CAGGAGGAAGCCGATCCTTT+GGG | + | chr5.3:10492973-10492992 | MS.gene047701:CDS | 55.0% | |
| CGCAGGTCTCTCAAGTGAAC+TGG | + | chr5.3:10494619-10494638 | MS.gene047701:CDS | 55.0% | |
| CGGTCAGAAGTCTCTGGACA+TGG | + | chr5.3:10491813-10491832 | MS.gene047701:CDS | 55.0% | |
| CGTGGGGTACAAAAAGCCCA+TGG | + | chr5.3:10493549-10493568 | MS.gene047701:intron | 55.0% | |
| GCGATCATCAAATGCCAGCG+TGG | + | chr5.3:10494957-10494976 | MS.gene047701:CDS | 55.0% | |
| GCTCACACCAATGGATCTGC+TGG | + | chr5.3:10494898-10494917 | MS.gene047701:CDS | 55.0% | |
| GGACATGGCTGATGAGCTGA+TGG | + | chr5.3:10491828-10491847 | MS.gene047701:CDS | 55.0% | |
| GGAGACTCCTCCTGCTTCTT+GGG | - | chr5.3:10493006-10493025 | None:intergenic | 55.0% | |
| GGGAACAGCACCCAAAGGAT+CGG | - | chr5.3:10492986-10493005 | None:intergenic | 55.0% | |
| TCAGGAGGAAGCCGATCCTT+TGG | + | chr5.3:10492972-10492991 | MS.gene047701:CDS | 55.0% | |
| TGCTGTTCCCAAGAAGCAGG+AGG | + | chr5.3:10492996-10493015 | MS.gene047701:CDS | 55.0% | |
| TGGAGACTCCTCCTGCTTCT+TGG | - | chr5.3:10493007-10493026 | None:intergenic | 55.0% | |
| TTCCTTTCCACTGCCTGCCT+TGG | - | chr5.3:10494797-10494816 | None:intergenic | 55.0% | |
| ! | AGAAGTTGCGGCGGATTCCA+CGG | - | chr5.3:10491773-10491792 | None:intergenic | 55.0% |
| ! | GTGACAGGTTCGGTTGGTTG+AGG | - | chr5.3:10491697-10491716 | None:intergenic | 55.0% |
| ! | GTGGTTTAGGGTTCCGTCGA+CGG | - | chr5.3:10491722-10491741 | None:intergenic | 55.0% |
| !! | CGGTGGTTCCGTTTTTGTCG+TGG | - | chr5.3:10491741-10491760 | None:intergenic | 55.0% |
| AGACTTCTGACCGTCGCTGC+TGG | - | chr5.3:10491806-10491825 | None:intergenic | 60.0% | |
| ATCCGCCGCAACTTCTGCTC+CGG | + | chr5.3:10491777-10491796 | MS.gene047701:CDS | 60.0% | |
| CAGCGACGGTCAGAAGTCTC+TGG | + | chr5.3:10491807-10491826 | MS.gene047701:CDS | 60.0% | |
| CCATCTTTGTCGGCGCCATG+TGG | - | chr5.3:10493027-10493046 | None:intergenic | 60.0% | |
| GAACCTGTCACAGCCGTCGA+CGG | + | chr5.3:10491706-10491725 | MS.gene047701:CDS | 60.0% | |
| GTCGACGGCTGTGACAGGTT+CGG | - | chr5.3:10491707-10491726 | None:intergenic | 60.0% | |
| TGCCAAGGCAGGCAGTGGAA+AGG | + | chr5.3:10494792-10494811 | MS.gene047701:CDS | 60.0% | |
| ! | ACGGCTGTGACAGGTTCGGT+TGG | - | chr5.3:10491703-10491722 | None:intergenic | 60.0% |
| ! | ACGTGTGCGGACTAAGTCCG+TGG | + | chr5.3:10493531-10493550 | MS.gene047701:intron | 60.0% |
| ! | CGTGTGCGGACTAAGTCCGT+GGG | + | chr5.3:10493532-10493551 | MS.gene047701:intron | 60.0% |
| ! | GTGTGCGGACTAAGTCCGTG+GGG | + | chr5.3:10493533-10493552 | MS.gene047701:intron | 60.0% |
| !! | CCACATGGCGCCGACAAAGA+TGG | + | chr5.3:10493024-10493043 | MS.gene047701:CDS | 60.0% |
| !! | GGGTGCTGTTCCCAAGAAGC+AGG | + | chr5.3:10492993-10493012 | MS.gene047701:CDS | 60.0% |
| GCATCTGCCAAGGCAGGCAG+TGG | + | chr5.3:10494787-10494806 | MS.gene047701:CDS | 65.0% | |
| GGACGCCGGAGCAGAAGTTG+CGG | - | chr5.3:10491785-10491804 | None:intergenic | 65.0% | |
| GGATTCCACGGCGGGGTTGA+CGG | - | chr5.3:10491761-10491780 | None:intergenic | 65.0% | |
| GTTCCGTCGACGGCTGTGAC+AGG | - | chr5.3:10491712-10491731 | None:intergenic | 65.0% | |
| ! | AGTTGCGGCGGATTCCACGG+CGG | - | chr5.3:10491770-10491789 | None:intergenic | 65.0% |
| AACCACCGTCAACCCCGCCG+TGG | + | chr5.3:10491753-10491772 | MS.gene047701:CDS | 70.0% | |
| CGCCGGAGCAGAAGTTGCGG+CGG | - | chr5.3:10491782-10491801 | None:intergenic | 70.0% | |
| TGACCGTCGCTGCTGGACGC+CGG | - | chr5.3:10491799-10491818 | None:intergenic | 70.0% | |
| TTCCACGGCGGGGTTGACGG+TGG | - | chr5.3:10491758-10491777 | None:intergenic | 70.0% | |
| ! | GTTGCGGCGGATTCCACGGC+GGG | - | chr5.3:10491769-10491788 | None:intergenic | 70.0% |
| ! | TTGCGGCGGATTCCACGGCG+GGG | - | chr5.3:10491768-10491787 | None:intergenic | 70.0% |
| GCTCCGGCGTCCAGCAGCGA+CGG | + | chr5.3:10491793-10491812 | MS.gene047701:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 10491649 | 10495050 | 10491649 | ID=MS.gene047701 |
| chr5.3 | mRNA | 10491649 | 10495050 | 10491649 | ID=MS.gene047701.t1;Parent=MS.gene047701 |
| chr5.3 | exon | 10491649 | 10491926 | 10491649 | ID=MS.gene047701.t1.exon1;Parent=MS.gene047701.t1 |
| chr5.3 | CDS | 10491649 | 10491926 | 10491649 | ID=cds.MS.gene047701.t1;Parent=MS.gene047701.t1 |
| chr5.3 | exon | 10492894 | 10493150 | 10492894 | ID=MS.gene047701.t1.exon2;Parent=MS.gene047701.t1 |
| chr5.3 | CDS | 10492894 | 10493150 | 10492894 | ID=cds.MS.gene047701.t1;Parent=MS.gene047701.t1 |
| chr5.3 | exon | 10493851 | 10494048 | 10493851 | ID=MS.gene047701.t1.exon3;Parent=MS.gene047701.t1 |
| chr5.3 | CDS | 10493851 | 10494048 | 10493851 | ID=cds.MS.gene047701.t1;Parent=MS.gene047701.t1 |
| chr5.3 | exon | 10494143 | 10494233 | 10494143 | ID=MS.gene047701.t1.exon4;Parent=MS.gene047701.t1 |
| chr5.3 | CDS | 10494143 | 10494233 | 10494143 | ID=cds.MS.gene047701.t1;Parent=MS.gene047701.t1 |
| chr5.3 | exon | 10494427 | 10494649 | 10494427 | ID=MS.gene047701.t1.exon5;Parent=MS.gene047701.t1 |
| chr5.3 | CDS | 10494427 | 10494649 | 10494427 | ID=cds.MS.gene047701.t1;Parent=MS.gene047701.t1 |
| chr5.3 | exon | 10494730 | 10495050 | 10494730 | ID=MS.gene047701.t1.exon6;Parent=MS.gene047701.t1 |
| chr5.3 | CDS | 10494730 | 10495050 | 10494730 | ID=cds.MS.gene047701.t1;Parent=MS.gene047701.t1 |
| Gene Sequence |
| Protein sequence |
