Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048734.t1 | P04078.1 | 100 | 356 | 0 | 0 | 1 | 356 | 1 | 356 | 3.90E-213 | 750.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048734.t1 | P04078 | 100.0 | 356 | 0 | 0 | 1 | 356 | 1 | 356 | 9.5e-216 | 750.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048734.t1 | G7J9B8 | 99.2 | 356 | 3 | 0 | 1 | 356 | 1 | 356 | 3.1e-212 | 746.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048734 | MS.gene72618 | PPI |
| MS.gene048734 | MS.gene81828 | PPI |
| MS.gene048734 | MS.gene93980 | PPI |
| MS.gene042906 | MS.gene048734 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048734.t1 | MTR_3g065250 | 99.157 | 356 | 3 | 0 | 1 | 356 | 1 | 356 | 0.0 | 728 |
| MS.gene048734.t1 | MTR_6g071070 | 89.326 | 356 | 38 | 0 | 1 | 356 | 1 | 356 | 0.0 | 676 |
| MS.gene048734.t1 | MTR_5g077950 | 87.042 | 355 | 46 | 0 | 2 | 356 | 3 | 357 | 0.0 | 657 |
| MS.gene048734.t1 | MTR_2g021255 | 79.213 | 356 | 74 | 0 | 1 | 356 | 57 | 412 | 0.0 | 612 |
| MS.gene048734.t1 | MTR_2g021242 | 75.562 | 356 | 87 | 0 | 1 | 356 | 57 | 412 | 0.0 | 590 |
| MS.gene048734.t1 | MTR_2g021255 | 78.042 | 337 | 74 | 0 | 1 | 337 | 57 | 393 | 0.0 | 562 |
| MS.gene048734.t1 | MTR_8g062840 | 58.000 | 100 | 29 | 2 | 257 | 356 | 1 | 87 | 2.23e-27 | 105 |
| MS.gene048734.t1 | MTR_2g021248 | 41.429 | 140 | 31 | 4 | 217 | 355 | 10 | 99 | 3.12e-21 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048734.t1 | AT5G37600 | 89.326 | 356 | 38 | 0 | 1 | 356 | 1 | 356 | 0.0 | 679 |
| MS.gene048734.t1 | AT1G66200 | 88.764 | 356 | 40 | 0 | 1 | 356 | 1 | 356 | 0.0 | 677 |
| MS.gene048734.t1 | AT5G16570 | 90.169 | 356 | 35 | 0 | 1 | 356 | 1 | 356 | 0.0 | 676 |
| MS.gene048734.t1 | AT1G66200 | 86.575 | 365 | 40 | 1 | 1 | 356 | 1 | 365 | 0.0 | 669 |
| MS.gene048734.t1 | AT3G17820 | 85.552 | 353 | 51 | 0 | 1 | 353 | 1 | 353 | 0.0 | 644 |
| MS.gene048734.t1 | AT1G48470 | 81.065 | 338 | 64 | 0 | 16 | 353 | 16 | 353 | 0.0 | 598 |
| MS.gene048734.t1 | AT5G35630 | 76.966 | 356 | 82 | 0 | 1 | 356 | 59 | 414 | 0.0 | 596 |
| MS.gene048734.t1 | AT5G35630 | 76.966 | 356 | 82 | 0 | 1 | 356 | 59 | 414 | 0.0 | 596 |
| MS.gene048734.t1 | AT5G35630 | 76.966 | 356 | 82 | 0 | 1 | 356 | 59 | 414 | 0.0 | 596 |
| MS.gene048734.t1 | AT1G66200 | 88.889 | 252 | 28 | 0 | 1 | 252 | 1 | 252 | 5.23e-174 | 484 |
| MS.gene048734.t1 | AT5G16570 | 89.540 | 239 | 25 | 0 | 1 | 239 | 1 | 239 | 8.56e-162 | 452 |
Find 111 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCAAACCTTAATTGGTTT+TGG | 0.177125 | 3.4:+66652808 | None:intergenic |
| CTTTGACCCAAAACCAATTA+AGG | 0.180257 | 3.4:-66652815 | MS.gene048734:intron |
| TGGAAATAGCAAACCTTAAT+TGG | 0.180907 | 3.4:+66652802 | None:intergenic |
| ATGGGTTGCTCGTTACATTT+TGG | 0.219815 | 3.4:-66653000 | MS.gene048734:CDS |
| CTGACATTAACACCTTCTTA+TGG | 0.238098 | 3.4:-66652210 | MS.gene048734:CDS |
| TCTAAATGGATCCTTGAAAA+TGG | 0.250502 | 3.4:+66654332 | None:intergenic |
| ATATTGTTACCCCTTCTAAA+TGG | 0.285580 | 3.4:+66654318 | None:intergenic |
| GCTGGTGCTGACAAGGCTTT+TGG | 0.308054 | 3.4:-66653291 | MS.gene048734:CDS |
| ATGTCTCTTGTTGGTGGGAA+TGG | 0.316733 | 3.4:+66653847 | None:intergenic |
| TCTCTGCTGGTGATGAGATA+TGG | 0.322815 | 3.4:-66653019 | MS.gene048734:CDS |
| AAGGAGCACATTGCTGCTTA+TGG | 0.324475 | 3.4:-66652274 | MS.gene048734:CDS |
| TAATGCAAAACTAGGGTGAT+TGG | 0.338203 | 3.4:-66652489 | MS.gene048734:intron |
| TGACATTAACACCTTCTTAT+GGG | 0.364511 | 3.4:-66652209 | MS.gene048734:intron |
| AGCTGTGAAGGGTCAGTAAC+TGG | 0.376973 | 3.4:+66654551 | None:intergenic |
| GGCAGCTGCATGTCTCTTGT+TGG | 0.378014 | 3.4:+66653838 | None:intergenic |
| GTGGGAATGGGCTCTCCAGC+TGG | 0.380314 | 3.4:+66653860 | None:intergenic |
| TATGTCAGGATTGGTGGATC+TGG | 0.389845 | 3.4:-66654723 | MS.gene048734:intron |
| AGAATCTAACCATATGTATT+CGG | 0.396012 | 3.4:+66655428 | None:intergenic |
| TGTCTCTTGTTGGTGGGAAT+GGG | 0.409298 | 3.4:+66653848 | None:intergenic |
| CAGGATTGGTGGATCTGGTT+TGG | 0.409454 | 3.4:-66654718 | MS.gene048734:CDS |
| TGAAAGCAATTGAGAAGCTT+GGG | 0.410163 | 3.4:-66652306 | MS.gene048734:CDS |
| ATCATGGAAGTAACAACATA+TGG | 0.411129 | 3.4:+66651893 | None:intergenic |
| TCCAGGAGCTTGACCTGTGC+TGG | 0.411245 | 3.4:+66654505 | None:intergenic |
| TAGAAGGGGTAACAATATCT+TGG | 0.417590 | 3.4:-66654313 | MS.gene048734:intron |
| CTGGTGCTCACACAAATTAC+AGG | 0.417888 | 3.4:-66652459 | MS.gene048734:intron |
| AAAGACATCAATTGGCCTCT+TGG | 0.419531 | 3.4:-66653647 | MS.gene048734:CDS |
| CCCTCAGTTGGTATCTCTGC+TGG | 0.420001 | 3.4:-66653032 | MS.gene048734:CDS |
| TTGAAAGCAATTGAGAAGCT+TGG | 0.420009 | 3.4:-66652307 | MS.gene048734:CDS |
| GGCAACGAGCGTAGATTGAC+AGG | 0.421220 | 3.4:-66652247 | MS.gene048734:CDS |
| TGTTGCAGAAAGACATCAAT+TGG | 0.424542 | 3.4:-66653655 | MS.gene048734:CDS |
| CTCTGCTGGTGATGAGATAT+GGG | 0.426324 | 3.4:-66653018 | MS.gene048734:CDS |
| TAGAGGATCACTGAGGTTGC+TGG | 0.429246 | 3.4:-66652850 | MS.gene048734:CDS |
| ATCAGGATGGCTGAAAATCT+TGG | 0.445473 | 3.4:+66653817 | None:intergenic |
| AAATCATTGCCGAATACATA+TGG | 0.453447 | 3.4:-66655437 | MS.gene048734:intron |
| CGGTGGTTTCGGAGAGGTCA+AGG | 0.456062 | 3.4:+66655463 | None:intergenic |
| GTTCATTATGTCAGGATTGG+TGG | 0.459850 | 3.4:-66654729 | MS.gene048734:intron |
| GTGGATCTGGTTTGGACTTG+AGG | 0.460278 | 3.4:-66654710 | MS.gene048734:CDS |
| GTCTTATGGTTTCCAGAGAA+TGG | 0.461165 | 3.4:+66651859 | None:intergenic |
| CCTCTTGGTTGGCCAGTTGG+TGG | 0.462411 | 3.4:-66653632 | MS.gene048734:CDS |
| AGCTGCATGTCTCTTGTTGG+TGG | 0.467488 | 3.4:+66653841 | None:intergenic |
| AATGGTGGTGTCTGCAATCA+TGG | 0.470051 | 3.4:+66651877 | None:intergenic |
| TCCAGCACAGGTCAAGCTCC+TGG | 0.473336 | 3.4:-66654506 | MS.gene048734:CDS |
| TTGCAGACACCACCATTCTC+TGG | 0.481231 | 3.4:-66651871 | MS.gene048734:CDS |
| TGGCCTCTTGGTTGGCCAGT+TGG | 0.482222 | 3.4:-66653635 | MS.gene048734:CDS |
| AACTATGATGGTTCCAGCAC+AGG | 0.485647 | 3.4:-66654518 | MS.gene048734:CDS |
| GGTACTTCAGCAACAACATC+AGG | 0.488296 | 3.4:+66653800 | None:intergenic |
| TTATTTGCTTACCCATAAGA+AGG | 0.490705 | 3.4:+66652198 | None:intergenic |
| TTCCACTTGGGAAGCTGTGA+AGG | 0.498232 | 3.4:+66654539 | None:intergenic |
| GATCCTTGAAAATGGCTTGT+GGG | 0.500897 | 3.4:+66654340 | None:intergenic |
| ACATCAATTGGCCTCTTGGT+TGG | 0.505676 | 3.4:-66653643 | MS.gene048734:CDS |
| GCACCAGCACCACAATAGTA+TGG | 0.514601 | 3.4:+66653306 | None:intergenic |
| GGAAGGGACACAGAGAAAGC+AGG | 0.514679 | 3.4:-66651959 | MS.gene048734:CDS |
| GGACCATACTATTGTGGTGC+TGG | 0.515556 | 3.4:-66653309 | MS.gene048734:CDS |
| ATCAACATCAGTGGAATCAA+TGG | 0.515689 | 3.4:-66653222 | MS.gene048734:CDS |
| CTTCCCAAGTGGAACTATGA+TGG | 0.516245 | 3.4:-66654530 | MS.gene048734:CDS |
| GGAAAGGTTATTTCGAGGAT+AGG | 0.519246 | 3.4:-66651937 | MS.gene048734:CDS |
| CACATTGCTGCTTATGGAGA+AGG | 0.521068 | 3.4:-66652268 | MS.gene048734:CDS |
| TACAAAGCCTGTCTTTATGC+CGG | 0.521155 | 3.4:-66653246 | MS.gene048734:CDS |
| ACCAAGTCTATGAGAGAAGA+TGG | 0.523810 | 3.4:-66652346 | MS.gene048734:CDS |
| TTTCAAGGATCCATTTAGAA+GGG | 0.527758 | 3.4:-66654328 | MS.gene048734:CDS |
| GTTGATGCCGGCATAAAGAC+AGG | 0.529739 | 3.4:+66653239 | None:intergenic |
| GGTCCAGGAAAACCACCAAC+TGG | 0.531726 | 3.4:+66653620 | None:intergenic |
| TATGGATCCATGTTAGATGA+TGG | 0.538723 | 3.4:+66651911 | None:intergenic |
| GCTGCATGTCTCTTGTTGGT+GGG | 0.539293 | 3.4:+66653842 | None:intergenic |
| TTGTGGTGCTGGTGCTGACA+AGG | 0.540639 | 3.4:-66653298 | MS.gene048734:CDS |
| TTCCAAGTTGGTCCCTCAGT+TGG | 0.551503 | 3.4:-66653044 | MS.gene048734:CDS |
| CGTGGTGCGTCGATTAGAGT+TGG | 0.552602 | 3.4:-66651980 | MS.gene048734:CDS |
| ATAACTTCACTATCTTCTCC+AGG | 0.553474 | 3.4:+66654488 | None:intergenic |
| GATCACTGAGGTTGCTGGTG+TGG | 0.554625 | 3.4:-66652845 | MS.gene048734:CDS |
| GATTCCACTGATGTTGATGC+CGG | 0.555187 | 3.4:+66653227 | None:intergenic |
| AGCAGGGAAAGGTTATTTCG+AGG | 0.555891 | 3.4:-66651942 | MS.gene048734:CDS |
| AAGGTTATTTCGAGGATAGG+AGG | 0.561130 | 3.4:-66651934 | MS.gene048734:CDS |
| GGATCCTTGAAAATGGCTTG+TGG | 0.562735 | 3.4:+66654339 | None:intergenic |
| TGGACTTGAGGAGCAAAGCA+AGG | 0.567464 | 3.4:-66654698 | MS.gene048734:CDS |
| ACCATCTTCTCTCATAGACT+TGG | 0.571470 | 3.4:+66652345 | None:intergenic |
| GGAACCATCATAGTTCCACT+TGG | 0.572427 | 3.4:+66654526 | None:intergenic |
| ATTGATGTCTTTCTGCAACA+AGG | 0.574318 | 3.4:+66653658 | None:intergenic |
| TTGCTCCAACTTACTTGACC+AGG | 0.576512 | 3.4:+66653189 | None:intergenic |
| TGTGATGCATACACTCCAGC+TGG | 0.581505 | 3.4:-66653875 | MS.gene048734:CDS |
| TACCAACTGAGGGACCAACT+TGG | 0.582203 | 3.4:+66653042 | None:intergenic |
| GTGCGTCGATTAGAGTTGGA+AGG | 0.584013 | 3.4:-66651976 | MS.gene048734:CDS |
| ATGTAGTGGGAATTCCAAGT+TGG | 0.586154 | 3.4:-66653056 | MS.gene048734:intron |
| TAGGGTGATTGGAATGGTGC+TGG | 0.586935 | 3.4:-66652478 | MS.gene048734:CDS |
| TTCAAGGATCCATTTAGAAG+GGG | 0.590326 | 3.4:-66654327 | MS.gene048734:CDS |
| ATCAATGGTGAAGTGATGCC+TGG | 0.592881 | 3.4:-66653207 | MS.gene048734:CDS |
| TCCACTTGGGAAGCTGTGAA+GGG | 0.596916 | 3.4:+66654540 | None:intergenic |
| GACACAGAGAAAGCAGGGAA+AGG | 0.598045 | 3.4:-66651953 | MS.gene048734:CDS |
| GAAGGGTCAGTAACTGGACC+TGG | 0.599215 | 3.4:+66654557 | None:intergenic |
| ACCCTTCACAGCTTCCCAAG+TGG | 0.605168 | 3.4:-66654541 | MS.gene048734:CDS |
| GGACTTGAGGAGCAAAGCAA+GGG | 0.609551 | 3.4:-66654697 | MS.gene048734:intron |
| CATTAGGGACCATACTATTG+TGG | 0.611010 | 3.4:-66653315 | MS.gene048734:intron |
| CAACTCTAATCGACGCACCA+CGG | 0.611739 | 3.4:+66651981 | None:intergenic |
| TAGGAGGCCATCATCTAACA+TGG | 0.627480 | 3.4:-66651918 | MS.gene048734:CDS |
| CAAGGTTGATGAGATCTGAA+AGG | 0.633414 | 3.4:+66655481 | None:intergenic |
| CAAAACTAGGGTGATTGGAA+TGG | 0.637511 | 3.4:-66652484 | MS.gene048734:intron |
| GAAGGGACACAGAGAAAGCA+GGG | 0.638354 | 3.4:-66651958 | MS.gene048734:CDS |
| TGCGTCGATTAGAGTTGGAA+GGG | 0.644595 | 3.4:-66651975 | MS.gene048734:CDS |
| GAACCATCATAGTTCCACTT+GGG | 0.652093 | 3.4:+66654527 | None:intergenic |
| TTGAAGGGTGTTGCAAACCG+TGG | 0.663350 | 3.4:-66651998 | MS.gene048734:intron |
| TTATGGTTTCCAGAGAATGG+TGG | 0.667248 | 3.4:+66651862 | None:intergenic |
| ACCAGCAGAGATACCAACTG+AGG | 0.670459 | 3.4:+66653031 | None:intergenic |
| CCACCAACTGGCCAACCAAG+AGG | 0.671238 | 3.4:+66653632 | None:intergenic |
| TATGCCGGCATCAACATCAG+TGG | 0.676060 | 3.4:-66653231 | MS.gene048734:CDS |
| CTTCAGCAACAACATCAGGA+TGG | 0.677550 | 3.4:+66653804 | None:intergenic |
| CCAGCAGAGATACCAACTGA+GGG | 0.678315 | 3.4:+66653032 | None:intergenic |
| AATGTGAGTCAACAATGTCA+CGG | 0.681181 | 3.4:+66653268 | None:intergenic |
| GCAACGAGCGTAGATTGACA+GGG | 0.702514 | 3.4:-66652246 | MS.gene048734:CDS |
| ATGTTGTTGCTGAAGTACCA+TGG | 0.706598 | 3.4:-66653796 | MS.gene048734:intron |
| GAAGCTTGGGAAGAAGCACA+AGG | 0.711059 | 3.4:-66652293 | MS.gene048734:CDS |
| AAGTCTATGAGAGAAGATGG+TGG | 0.739470 | 3.4:-66652343 | MS.gene048734:CDS |
| GTTCCAATAGAGGATCACTG+AGG | 0.789699 | 3.4:-66652857 | MS.gene048734:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAATATATACATAATTA+AGG | + | chr3.4:66652935-66652954 | None:intergenic | 10.0% |
| !! | ATGAATAAAAAAAATAATCA+TGG | + | chr3.4:66652133-66652152 | None:intergenic | 10.0% |
| !! | TAAAAAAAAACATAAAACTA+TGG | + | chr3.4:66653910-66653929 | None:intergenic | 10.0% |
| !!! | ATTATGATTTTTACTTATTT+GGG | - | chr3.4:66652972-66652991 | MS.gene048734:intron | 10.0% |
| !!! | TAAACAAATTTAAAACAATT+AGG | + | chr3.4:66653885-66653904 | None:intergenic | 10.0% |
| !!! | TATTATGATTTTTACTTATT+TGG | - | chr3.4:66652971-66652990 | MS.gene048734:intron | 10.0% |
| !! | AATGAACATAAATTAATCAA+AGG | + | chr3.4:66652609-66652628 | None:intergenic | 15.0% |
| !! | AATTTAATTAAACACAAAAG+AGG | + | chr3.4:66653447-66653466 | None:intergenic | 15.0% |
| !! | ATAAACAATTACCATAAAAA+AGG | + | chr3.4:66652205-66652224 | None:intergenic | 15.0% |
| !! | ATGAACATAAATTAATCAAA+GGG | + | chr3.4:66652608-66652627 | None:intergenic | 15.0% |
| !! | ATTTAATTAAACACAAAAGA+GGG | + | chr3.4:66653446-66653465 | None:intergenic | 15.0% |
| !! | GTAGTAAATAATAATGATAA+AGG | + | chr3.4:66654206-66654225 | None:intergenic | 15.0% |
| !! | TAAACAATTACCATAAAAAA+GGG | + | chr3.4:66652204-66652223 | None:intergenic | 15.0% |
| !! | TTGTCTTATATTTACTATTT+GGG | - | chr3.4:66654636-66654655 | MS.gene048734:intron | 15.0% |
| !!! | AAAATATAAATGGCTTTTTT+TGG | - | chr3.4:66652759-66652778 | MS.gene048734:intron | 15.0% |
| !!! | AAATATAAATGGCTTTTTTT+GGG | - | chr3.4:66652760-66652779 | MS.gene048734:intron | 15.0% |
| !!! | AAATTTAAAACAATTAGGTA+AGG | + | chr3.4:66653880-66653899 | None:intergenic | 15.0% |
| !!! | ATTTTATAATTTGCTCATTA+GGG | - | chr3.4:66654021-66654040 | MS.gene048734:intron | 15.0% |
| !!! | ATTTTTTTAATGCAAAACTA+GGG | - | chr3.4:66654855-66654874 | MS.gene048734:intron | 15.0% |
| !!! | CTATAGTTGAATATTTTATA+TGG | - | chr3.4:66654946-66654965 | MS.gene048734:intron | 15.0% |
| !!! | TAGTAATTTTGATACATTTA+AGG | + | chr3.4:66653139-66653158 | None:intergenic | 15.0% |
| !!! | TATTTTATAATTTGCTCATT+AGG | - | chr3.4:66654020-66654039 | MS.gene048734:intron | 15.0% |
| !!! | TATTTTTTTAATGCAAAACT+AGG | - | chr3.4:66654854-66654873 | MS.gene048734:intron | 15.0% |
| !!! | TTATGATTTTTACTTATTTG+GGG | - | chr3.4:66652973-66652992 | MS.gene048734:intron | 15.0% |
| !!! | TTTTCTTTTTTTTCTTTTCT+TGG | + | chr3.4:66655195-66655214 | None:intergenic | 15.0% |
| !!! | TTTTGTGTTTAATTAAATTC+AGG | - | chr3.4:66653448-66653467 | MS.gene048734:intron | 15.0% |
| !!! | TTTTTTGTTTGGAATAAAAT+TGG | - | chr3.4:66652401-66652420 | MS.gene048734:intron | 15.0% |
| !! | AAAGTCAACTTAAATAGTAA+GGG | + | chr3.4:66654832-66654851 | None:intergenic | 20.0% |
| !! | CTTGTCTTATATTTACTATT+TGG | - | chr3.4:66654635-66654654 | MS.gene048734:intron | 20.0% |
| !! | TAATTTATGTTCATTATGTC+AGG | - | chr3.4:66652614-66652633 | MS.gene048734:intron | 20.0% |
| !! | TATAAGACAAGTATATCAAT+TGG | + | chr3.4:66654626-66654645 | None:intergenic | 20.0% |
| !! | TGAACATAAATTAATCAAAG+GGG | + | chr3.4:66652607-66652626 | None:intergenic | 20.0% |
| !!! | AATGACTTTGTTTTTTTGTT+TGG | - | chr3.4:66652390-66652409 | MS.gene048734:intron | 20.0% |
| !!! | AGAATTTTAATATCATGGTT+TGG | + | chr3.4:66652540-66652559 | None:intergenic | 20.0% |
| !!! | ATAGATTTTTAAGCTGATTT+TGG | - | chr3.4:66652256-66652275 | MS.gene048734:CDS | 20.0% |
| !!! | GCTTTTTTTTTTAATGTAGT+GGG | - | chr3.4:66654282-66654301 | MS.gene048734:intron | 20.0% |
| !!! | GTACAAGAATTTTAATATCA+TGG | + | chr3.4:66652545-66652564 | None:intergenic | 20.0% |
| !!! | TAGATTTTTAAGCTGATTTT+GGG | - | chr3.4:66652257-66652276 | MS.gene048734:CDS | 20.0% |
| !!! | TATTTTGTTCTCTATTTTCT+TGG | - | chr3.4:66652947-66652966 | MS.gene048734:intron | 20.0% |
| !!! | TGATTATTTTCCCTTTTTTA+TGG | - | chr3.4:66652191-66652210 | MS.gene048734:intron | 20.0% |
| !!! | TGCTTTTTTTTTTAATGTAG+TGG | - | chr3.4:66654281-66654300 | MS.gene048734:intron | 20.0% |
| !!! | TTGAATATTTTATATGGTCA+TGG | - | chr3.4:66654952-66654971 | MS.gene048734:intron | 20.0% |
| !!! | TTGTCTTTTGTTAATTAGTT+TGG | - | chr3.4:66653204-66653223 | MS.gene048734:CDS | 20.0% |
| !!! | TTTTTTGTTGTTCTAATTGT+TGG | - | chr3.4:66655315-66655334 | MS.gene048734:intron | 20.0% |
| ! | AAAAAAGGGAAAATAATCAC+TGG | + | chr3.4:66652190-66652209 | None:intergenic | 25.0% |
| ! | AAAAACAAATGTTACAGACT+AGG | + | chr3.4:66655293-66655312 | None:intergenic | 25.0% |
| ! | AACAAAGAAAGTTAGTTAGT+TGG | + | chr3.4:66654471-66654490 | None:intergenic | 25.0% |
| ! | AACATGTGTATTTAATGCAT+TGG | + | chr3.4:66654746-66654765 | None:intergenic | 25.0% |
| ! | AGAATCTAACCATATGTATT+CGG | + | chr3.4:66651926-66651945 | None:intergenic | 25.0% |
| ! | CAAAGTCAACTTAAATAGTA+AGG | + | chr3.4:66654833-66654852 | None:intergenic | 25.0% |
| ! | GAACATAAATTAATCAAAGG+GGG | + | chr3.4:66652606-66652625 | None:intergenic | 25.0% |
| ! | GAATAACTTGATTCAAACAA+AGG | + | chr3.4:66654575-66654594 | None:intergenic | 25.0% |
| ! | TACACAATCATATGAGAAAA+TGG | - | chr3.4:66653818-66653837 | MS.gene048734:CDS | 25.0% |
| !!! | GGTGAATTTTTTATTGTCAT+TGG | - | chr3.4:66653960-66653979 | MS.gene048734:intron | 25.0% |
| !!! | TGAACTTTTTGACTTTTTGA+AGG | + | chr3.4:66654719-66654738 | None:intergenic | 25.0% |
| AAAGGTTAAAATGAGTGCAT+AGG | + | chr3.4:66654188-66654207 | None:intergenic | 30.0% | |
| AAAGTTAGTTAGTTGGAGAA+GGG | + | chr3.4:66654464-66654483 | None:intergenic | 30.0% | |
| AAATCATTGCCGAATACATA+TGG | - | chr3.4:66651914-66651933 | MS.gene048734:CDS | 30.0% | |
| AGAACAGAGAAAATCATCAT+GGG | + | chr3.4:66652318-66652337 | None:intergenic | 30.0% | |
| ATACATTTAAGGACTAACGA+CGG | + | chr3.4:66653128-66653147 | None:intergenic | 30.0% | |
| ATACGTAGTAGACTTGTAAT+CGG | + | chr3.4:66655242-66655261 | None:intergenic | 30.0% | |
| ATATTGTTACCCCTTCTAAA+TGG | + | chr3.4:66653036-66653055 | None:intergenic | 30.0% | |
| ATCATGGAAGTAACAACATA+TGG | + | chr3.4:66655461-66655480 | None:intergenic | 30.0% | |
| ATTACAAGTCTACTACGTAT+GGG | - | chr3.4:66655242-66655261 | MS.gene048734:intron | 30.0% | |
| CAGATGATTCAATATACAAC+AGG | + | chr3.4:66653362-66653381 | None:intergenic | 30.0% | |
| CCATTCAATAAGTCAAAAAG+AGG | + | chr3.4:66654430-66654449 | None:intergenic | 30.0% | |
| GACAAGTATATCAATTGGAA+AGG | + | chr3.4:66654621-66654640 | None:intergenic | 30.0% | |
| TAACTTGATTCAAACAAAGG+TGG | + | chr3.4:66654572-66654591 | None:intergenic | 30.0% | |
| TATATCAATTGGAAAGGAGT+TGG | + | chr3.4:66654615-66654634 | None:intergenic | 30.0% | |
| TATGTTCATTATGTCAGGAT+TGG | - | chr3.4:66652619-66652638 | MS.gene048734:intron | 30.0% | |
| TCTAAATGGATCCTTGAAAA+TGG | + | chr3.4:66653022-66653041 | None:intergenic | 30.0% | |
| TCTCATATTATTACCACTCA+TGG | + | chr3.4:66653849-66653868 | None:intergenic | 30.0% | |
| TGACATTAACACCTTCTTAT+GGG | - | chr3.4:66655142-66655161 | MS.gene048734:intron | 30.0% | |
| TGGAAATAGCAAACCTTAAT+TGG | + | chr3.4:66654552-66654571 | None:intergenic | 30.0% | |
| TTATTTGCTTACCCATAAGA+AGG | + | chr3.4:66655156-66655175 | None:intergenic | 30.0% | |
| TTGTTTGGTATTGTACTTAG+TGG | + | chr3.4:66652515-66652534 | None:intergenic | 30.0% | |
| TTTCAAGGATCCATTTAGAA+GGG | - | chr3.4:66653023-66653042 | MS.gene048734:CDS | 30.0% | |
| ! | AATAAGTCAAAAAGAGGTGT+TGG | + | chr3.4:66654424-66654443 | None:intergenic | 30.0% |
| ! | ATGATTCTAGAAAAACGTTG+CGG | + | chr3.4:66652095-66652114 | None:intergenic | 30.0% |
| ! | CTCAATTTGAACTTGTCTTT+TGG | - | chr3.4:66653939-66653958 | MS.gene048734:intron | 30.0% |
| ! | CTGTTGTATGATTTGTGATT+AGG | - | chr3.4:66653648-66653667 | MS.gene048734:CDS | 30.0% |
| ! | CTTTGTTTATGTTCCAATAG+AGG | - | chr3.4:66654484-66654503 | MS.gene048734:CDS | 30.0% |
| ! | GGATTTTTGTTCTGTTTGTT+AGG | - | chr3.4:66652286-66652305 | MS.gene048734:CDS | 30.0% |
| ! | GTATGATTTGTGATTAGGTA+TGG | - | chr3.4:66653653-66653672 | MS.gene048734:CDS | 30.0% |
| !! | GATTTTTACTTATTTGGGGT+TGG | - | chr3.4:66652977-66652996 | MS.gene048734:intron | 30.0% |
| !! | TAGCAAACCTTAATTGGTTT+TGG | + | chr3.4:66654546-66654565 | None:intergenic | 30.0% |
| !! | TTTTCAAGGATCCATTTAGA+AGG | - | chr3.4:66653022-66653041 | MS.gene048734:CDS | 30.0% |
| !!! | AGCAAACCTTAATTGGTTTT+GGG | + | chr3.4:66654545-66654564 | None:intergenic | 30.0% |
| !!! | CCTCTTTTTGACTTATTGAA+TGG | - | chr3.4:66654427-66654446 | MS.gene048734:intron | 30.0% |
| !!! | CTGATAGTCATTTTGATTCT+TGG | - | chr3.4:66653089-66653108 | MS.gene048734:intron | 30.0% |
| !!! | TATCATGGTTTGGTTTTGTT+TGG | + | chr3.4:66652530-66652549 | None:intergenic | 30.0% |
| !!! | TGTTTTTTGATGGTTGAGTA+TGG | - | chr3.4:66652343-66652362 | MS.gene048734:CDS | 30.0% |
| AATGTGAGTCAACAATGTCA+CGG | + | chr3.4:66654086-66654105 | None:intergenic | 35.0% | |
| ACGATAAACAAGTGGCAAAA+AGG | + | chr3.4:66653614-66653633 | None:intergenic | 35.0% | |
| AGTAGCAACAAAAGATACCA+TGG | + | chr3.4:66653575-66653594 | None:intergenic | 35.0% | |
| ATAACTTCACTATCTTCTCC+AGG | + | chr3.4:66652866-66652885 | None:intergenic | 35.0% | |
| ATCAACATCAGTGGAATCAA+TGG | - | chr3.4:66654129-66654148 | MS.gene048734:intron | 35.0% | |
| ATCAGAACACGATAAACAAG+TGG | + | chr3.4:66653622-66653641 | None:intergenic | 35.0% | |
| ATTGATGTCTTTCTGCAACA+AGG | + | chr3.4:66653696-66653715 | None:intergenic | 35.0% | |
| CAGAACAGAGAAAATCATCA+TGG | + | chr3.4:66652319-66652338 | None:intergenic | 35.0% | |
| CTGACATTAACACCTTCTTA+TGG | - | chr3.4:66655141-66655160 | MS.gene048734:intron | 35.0% | |
| CTTTGACCCAAAACCAATTA+AGG | - | chr3.4:66654536-66654555 | MS.gene048734:CDS | 35.0% | |
| GAAAGTTAGTTAGTTGGAGA+AGG | + | chr3.4:66654465-66654484 | None:intergenic | 35.0% | |
| GATTACAAGTCTACTACGTA+TGG | - | chr3.4:66655241-66655260 | MS.gene048734:intron | 35.0% | |
| GTGTGTCTTGGAAAACATAT+TGG | + | chr3.4:66653234-66653253 | None:intergenic | 35.0% | |
| TAATGCAAAACTAGGGTGAT+TGG | - | chr3.4:66654862-66654881 | MS.gene048734:intron | 35.0% | |
| TAGAAGGGGTAACAATATCT+TGG | - | chr3.4:66653038-66653057 | MS.gene048734:CDS | 35.0% | |
| TATGGATCCATGTTAGATGA+TGG | + | chr3.4:66655443-66655462 | None:intergenic | 35.0% | |
| TATTGTACTTAGTGGTAGAC+TGG | + | chr3.4:66652507-66652526 | None:intergenic | 35.0% | |
| TGAAAGCAATTGAGAAGCTT+GGG | - | chr3.4:66655045-66655064 | MS.gene048734:intron | 35.0% | |
| TGTTGCAGAAAGACATCAAT+TGG | - | chr3.4:66653696-66653715 | MS.gene048734:intron | 35.0% | |
| TTACAAGTCTACTACGTATG+GGG | - | chr3.4:66655243-66655262 | MS.gene048734:intron | 35.0% | |
| TTCAAGGATCCATTTAGAAG+GGG | - | chr3.4:66653024-66653043 | MS.gene048734:CDS | 35.0% | |
| TTGAAAGCAATTGAGAAGCT+TGG | - | chr3.4:66655044-66655063 | MS.gene048734:intron | 35.0% | |
| ! | AATGAAAGTGAGTTTTCACC+TGG | + | chr3.4:66653757-66653776 | None:intergenic | 35.0% |
| ! | AATGATTTTCTCGGTGGTTT+CGG | + | chr3.4:66651902-66651921 | None:intergenic | 35.0% |
| ! | AGTAGTGTTTTTCGTACGTA+CGG | + | chr3.4:66652027-66652046 | None:intergenic | 35.0% |
| ! | ATGAAAGTGAGTTTTCACCT+GGG | + | chr3.4:66653756-66653775 | None:intergenic | 35.0% |
| ! | GTATTCGGCAATGATTTTCT+CGG | + | chr3.4:66651911-66651930 | None:intergenic | 35.0% |
| !!! | CTTAATTGGTTTTGGGTCAA+AGG | + | chr3.4:66654538-66654557 | None:intergenic | 35.0% |
| !!! | GTTCTGACTCTGTTTTTTGA+TGG | - | chr3.4:66652333-66652352 | MS.gene048734:CDS | 35.0% |
| !!! | TAAGCTGATTTTGGGATATG+AGG | - | chr3.4:66652265-66652284 | MS.gene048734:CDS | 35.0% |
| AAACATCATCGAGTGTGTCT+TGG | + | chr3.4:66653246-66653265 | None:intergenic | 40.0% | |
| AAGTCTATGAGAGAAGATGG+TGG | - | chr3.4:66655008-66655027 | MS.gene048734:intron | 40.0% | |
| ACCAAGTCTATGAGAGAAGA+TGG | - | chr3.4:66655005-66655024 | MS.gene048734:intron | 40.0% | |
| ACCATCTTCTCTCATAGACT+TGG | + | chr3.4:66655009-66655028 | None:intergenic | 40.0% | |
| ATCAGGATGGCTGAAAATCT+TGG | + | chr3.4:66653537-66653556 | None:intergenic | 40.0% | |
| CAAAACTAGGGTGATTGGAA+TGG | - | chr3.4:66654867-66654886 | MS.gene048734:intron | 40.0% | |
| CATTAGGGACCATACTATTG+TGG | - | chr3.4:66654036-66654055 | MS.gene048734:intron | 40.0% | |
| CTATTGTGAGTTTATGCAGC+TGG | - | chr3.4:66653401-66653420 | MS.gene048734:intron | 40.0% | |
| GAACCATCATAGTTCCACTT+GGG | + | chr3.4:66652827-66652846 | None:intergenic | 40.0% | |
| GTTCATTATGTCAGGATTGG+TGG | - | chr3.4:66652622-66652641 | MS.gene048734:intron | 40.0% | |
| TACAAAGCCTGTCTTTATGC+CGG | - | chr3.4:66654105-66654124 | MS.gene048734:intron | 40.0% | |
| TACAAGTCTACTACGTATGG+GGG | - | chr3.4:66655244-66655263 | MS.gene048734:intron | 40.0% | |
| TGTTGTTCTAATTGTTGGCG+TGG | - | chr3.4:66655320-66655339 | MS.gene048734:intron | 40.0% | |
| TTATGGTTTCCAGAGAATGG+TGG | + | chr3.4:66655492-66655511 | None:intergenic | 40.0% | |
| TTCTGATCCCTAAATGTGTG+AGG | + | chr3.4:66653306-66653325 | None:intergenic | 40.0% | |
| ! | AAAGACATCAATTGGCCTCT+TGG | - | chr3.4:66653704-66653723 | MS.gene048734:intron | 40.0% |
| ! | AAGGTTATTTCGAGGATAGG+AGG | - | chr3.4:66655417-66655436 | MS.gene048734:intron | 40.0% |
| ! | ATGTAGTGGGAATTCCAAGT+TGG | - | chr3.4:66654295-66654314 | MS.gene048734:intron | 40.0% |
| ! | ATGTTGTTGCTGAAGTACCA+TGG | - | chr3.4:66653555-66653574 | MS.gene048734:intron | 40.0% |
| ! | ATTCTAGAAAAACGTTGCGG+TGG | + | chr3.4:66652092-66652111 | None:intergenic | 40.0% |
| ! | GATCCTTGAAAATGGCTTGT+GGG | + | chr3.4:66653014-66653033 | None:intergenic | 40.0% |
| ! | GGAAAGGTTATTTCGAGGAT+AGG | - | chr3.4:66655414-66655433 | MS.gene048734:intron | 40.0% |
| ! | TGAAAGTGAGTTTTCACCTG+GGG | + | chr3.4:66653755-66653774 | None:intergenic | 40.0% |
| !! | ATGGGTTGCTCGTTACATTT+TGG | - | chr3.4:66654351-66654370 | MS.gene048734:intron | 40.0% |
| !! | CAAGGTTGATGAGATCTGAA+AGG | + | chr3.4:66651873-66651892 | None:intergenic | 40.0% |
| !! | CGTGGCTTGTGTTATTTGAA+GGG | - | chr3.4:66655338-66655357 | MS.gene048734:intron | 40.0% |
| !! | CTTGGTGCTACAGCATTATA+AGG | + | chr3.4:66654991-66655010 | None:intergenic | 40.0% |
| AAAACCCTTAACAAGTGCCC+CGG | - | chr3.4:66654788-66654807 | MS.gene048734:intron | 45.0% | |
| AACTATGATGGTTCCAGCAC+AGG | - | chr3.4:66652833-66652852 | MS.gene048734:CDS | 45.0% | |
| ACAAGTCTACTACGTATGGG+GGG | - | chr3.4:66655245-66655264 | MS.gene048734:intron | 45.0% | |
| AGTGGTAGACTGGTAGGTTT+GGG | + | chr3.4:66652497-66652516 | None:intergenic | 45.0% | |
| ATCAATGGTGAAGTGATGCC+TGG | - | chr3.4:66654144-66654163 | MS.gene048734:intron | 45.0% | |
| ATGTGTGAGGCGTGTCAATA+TGG | + | chr3.4:66653293-66653312 | None:intergenic | 45.0% | |
| CAACCTCAGTGATCCTCTAT+TGG | + | chr3.4:66654500-66654519 | None:intergenic | 45.0% | |
| CTGGTGCTCACACAAATTAC+AGG | - | chr3.4:66654892-66654911 | MS.gene048734:intron | 45.0% | |
| CTTCAGCAACAACATCAGGA+TGG | + | chr3.4:66653550-66653569 | None:intergenic | 45.0% | |
| CTTCCCAAGTGGAACTATGA+TGG | - | chr3.4:66652821-66652840 | MS.gene048734:CDS | 45.0% | |
| GAAAATGGTGTGACCATGAG+TGG | - | chr3.4:66653833-66653852 | MS.gene048734:CDS | 45.0% | |
| GATTCCACTGATGTTGATGC+CGG | + | chr3.4:66654127-66654146 | None:intergenic | 45.0% | |
| GGAACCATCATAGTTCCACT+TGG | + | chr3.4:66652828-66652847 | None:intergenic | 45.0% | |
| GGATCCTTGAAAATGGCTTG+TGG | + | chr3.4:66653015-66653034 | None:intergenic | 45.0% | |
| GGTACTTCAGCAACAACATC+AGG | + | chr3.4:66653554-66653573 | None:intergenic | 45.0% | |
| GTACTTAGTGGTAGACTGGT+AGG | + | chr3.4:66652503-66652522 | None:intergenic | 45.0% | |
| GTTCCAATAGAGGATCACTG+AGG | - | chr3.4:66654494-66654513 | MS.gene048734:CDS | 45.0% | |
| TAGGAGGCCATCATCTAACA+TGG | - | chr3.4:66655433-66655452 | MS.gene048734:intron | 45.0% | |
| TAGTGGTAGACTGGTAGGTT+TGG | + | chr3.4:66652498-66652517 | None:intergenic | 45.0% | |
| TGACACGCCTCACACATTTA+GGG | - | chr3.4:66653296-66653315 | MS.gene048734:CDS | 45.0% | |
| TGATGCCTGGTCAAGTAAGT+TGG | - | chr3.4:66654157-66654176 | MS.gene048734:intron | 45.0% | |
| TTGACACGCCTCACACATTT+AGG | - | chr3.4:66653295-66653314 | MS.gene048734:CDS | 45.0% | |
| TTGCTCCAACTTACTTGACC+AGG | + | chr3.4:66654165-66654184 | None:intergenic | 45.0% | |
| ! | AAGGAGCACATTGCTGCTTA+TGG | - | chr3.4:66655077-66655096 | MS.gene048734:intron | 45.0% |
| ! | AATGGTGGTGTCTGCAATCA+TGG | + | chr3.4:66655477-66655496 | None:intergenic | 45.0% |
| ! | ACATCAATTGGCCTCTTGGT+TGG | - | chr3.4:66653708-66653727 | MS.gene048734:intron | 45.0% |
| ! | AGCAGGGAAAGGTTATTTCG+AGG | - | chr3.4:66655409-66655428 | MS.gene048734:intron | 45.0% |
| ! | ATGTCTCTTGTTGGTGGGAA+TGG | + | chr3.4:66653507-66653526 | None:intergenic | 45.0% |
| ! | CACATTGCTGCTTATGGAGA+AGG | - | chr3.4:66655083-66655102 | MS.gene048734:intron | 45.0% |
| ! | CTCTGCTGGTGATGAGATAT+GGG | - | chr3.4:66654333-66654352 | MS.gene048734:CDS | 45.0% |
| ! | GGTTGCTCGTTACATTTTGG+AGG | - | chr3.4:66654354-66654373 | MS.gene048734:intron | 45.0% |
| ! | TATGTCAGGATTGGTGGATC+TGG | - | chr3.4:66652628-66652647 | MS.gene048734:intron | 45.0% |
| ! | TCTCTGCTGGTGATGAGATA+TGG | - | chr3.4:66654332-66654351 | MS.gene048734:CDS | 45.0% |
| ! | TGTCTCTTGTTGGTGGGAAT+GGG | + | chr3.4:66653506-66653525 | None:intergenic | 45.0% |
| ! | TTCGGCAATGATTTTCTCGG+TGG | + | chr3.4:66651908-66651927 | None:intergenic | 45.0% |
| !! | AGAATGCTTAAAGAGTGCCC+CGG | + | chr3.4:66654680-66654699 | None:intergenic | 45.0% |
| !! | CGTTACATTTTGGAGGTAGG+TGG | - | chr3.4:66654361-66654380 | MS.gene048734:intron | 45.0% |
| !! | GCGTGGCTTGTGTTATTTGA+AGG | - | chr3.4:66655337-66655356 | MS.gene048734:intron | 45.0% |
| !! | GCTCGTTACATTTTGGAGGT+AGG | - | chr3.4:66654358-66654377 | MS.gene048734:intron | 45.0% |
| !! | TGCAGCTGGTCTTGTTTCAT+TGG | - | chr3.4:66653415-66653434 | MS.gene048734:intron | 45.0% |
| !! | TGCGTCGATTAGAGTTGGAA+GGG | - | chr3.4:66655376-66655395 | MS.gene048734:intron | 45.0% |
| !! | TAATTTATTGAAAATATAAA+TGG | - | chr3.4:66652749-66652768 | MS.gene048734:intron | 5.0% |
| AAACCCTTAACAAGTGCCCC+GGG | - | chr3.4:66654789-66654808 | MS.gene048734:intron | 50.0% | |
| AAATGTTAACGAGTGCCCCC+GGG | + | chr3.4:66654809-66654828 | None:intergenic | 50.0% | |
| ACCAGCAGAGATACCAACTG+AGG | + | chr3.4:66654323-66654342 | None:intergenic | 50.0% | |
| AGCTGCATGTCTCTTGTTGG+TGG | + | chr3.4:66653513-66653532 | None:intergenic | 50.0% | |
| AGCTGTGAAGGGTCAGTAAC+TGG | + | chr3.4:66652803-66652822 | None:intergenic | 50.0% | |
| CAACTCTAATCGACGCACCA+CGG | + | chr3.4:66655373-66655392 | None:intergenic | 50.0% | |
| CCAGCAGAGATACCAACTGA+GGG | + | chr3.4:66654322-66654341 | None:intergenic | 50.0% | |
| GAAATGTTAACGAGTGCCCC+CGG | + | chr3.4:66654810-66654829 | None:intergenic | 50.0% | |
| GAAGGGACACAGAGAAAGCA+GGG | - | chr3.4:66655393-66655412 | MS.gene048734:intron | 50.0% | |
| GACACAGAGAAAGCAGGGAA+AGG | - | chr3.4:66655398-66655417 | MS.gene048734:intron | 50.0% | |
| GCAACGAGCGTAGATTGACA+GGG | - | chr3.4:66655105-66655124 | MS.gene048734:intron | 50.0% | |
| GCACCAGCACCACAATAGTA+TGG | + | chr3.4:66654048-66654067 | None:intergenic | 50.0% | |
| GCTGCATGTCTCTTGTTGGT+GGG | + | chr3.4:66653512-66653531 | None:intergenic | 50.0% | |
| GGACCATACTATTGTGGTGC+TGG | - | chr3.4:66654042-66654061 | MS.gene048734:intron | 50.0% | |
| GGACTTGAGGAGCAAAGCAA+GGG | - | chr3.4:66652654-66652673 | MS.gene048734:intron | 50.0% | |
| GTTGATGCCGGCATAAAGAC+AGG | + | chr3.4:66654115-66654134 | None:intergenic | 50.0% | |
| TACCAACTGAGGGACCAACT+TGG | + | chr3.4:66654312-66654331 | None:intergenic | 50.0% | |
| TAGAGGATCACTGAGGTTGC+TGG | - | chr3.4:66654501-66654520 | MS.gene048734:CDS | 50.0% | |
| TAGGGTGATTGGAATGGTGC+TGG | - | chr3.4:66654873-66654892 | MS.gene048734:intron | 50.0% | |
| TATGCCGGCATCAACATCAG+TGG | - | chr3.4:66654120-66654139 | MS.gene048734:intron | 50.0% | |
| TCCACTTGGGAAGCTGTGAA+GGG | + | chr3.4:66652814-66652833 | None:intergenic | 50.0% | |
| TGGACTTGAGGAGCAAAGCA+AGG | - | chr3.4:66652653-66652672 | MS.gene048734:intron | 50.0% | |
| TGTGATGCATACACTCCAGC+TGG | - | chr3.4:66653476-66653495 | MS.gene048734:intron | 50.0% | |
| TTCCACTTGGGAAGCTGTGA+AGG | + | chr3.4:66652815-66652834 | None:intergenic | 50.0% | |
| TTGCAGACACCACCATTCTC+TGG | - | chr3.4:66655480-66655499 | MS.gene048734:CDS | 50.0% | |
| ! | CAGGATTGGTGGATCTGGTT+TGG | - | chr3.4:66652633-66652652 | MS.gene048734:intron | 50.0% |
| ! | GAAGCTTGGGAAGAAGCACA+AGG | - | chr3.4:66655058-66655077 | MS.gene048734:intron | 50.0% |
| ! | TACGTATGGGGGGATTAGTG+CGG | - | chr3.4:66655255-66655274 | MS.gene048734:intron | 50.0% |
| ! | TTTTCTCGGTGGTTTCGGAG+AGG | + | chr3.4:66651897-66651916 | None:intergenic | 50.0% |
| !! | AATGCTTAAAGAGTGCCCCG+GGG | + | chr3.4:66654678-66654697 | None:intergenic | 50.0% |
| !! | CAGCCCACAAGCCATTTTCA+AGG | - | chr3.4:66653008-66653027 | MS.gene048734:CDS | 50.0% |
| !! | GAATGCTTAAAGAGTGCCCC+GGG | + | chr3.4:66654679-66654698 | None:intergenic | 50.0% |
| !! | GTGCGTCGATTAGAGTTGGA+AGG | - | chr3.4:66655375-66655394 | MS.gene048734:intron | 50.0% |
| !! | GTGGATCTGGTTTGGACTTG+AGG | - | chr3.4:66652641-66652660 | MS.gene048734:intron | 50.0% |
| !! | TTCCAAGTTGGTCCCTCAGT+TGG | - | chr3.4:66654307-66654326 | MS.gene048734:intron | 50.0% |
| !! | TTGAAGGGTGTTGCAAACCG+TGG | - | chr3.4:66655353-66655372 | MS.gene048734:intron | 50.0% |
| !! | TTTTGGGTGCAGACTCTACC+AGG | - | chr3.4:66652776-66652795 | MS.gene048734:intron | 50.0% |
| AACCCTTAACAAGTGCCCCG+GGG | - | chr3.4:66654790-66654809 | MS.gene048734:intron | 55.0% | |
| AATGTTAACGAGTGCCCCCG+GGG | + | chr3.4:66654808-66654827 | None:intergenic | 55.0% | |
| ACCCTTCACAGCTTCCCAAG+TGG | - | chr3.4:66652810-66652829 | MS.gene048734:intron | 55.0% | |
| GAAGGGTCAGTAACTGGACC+TGG | + | chr3.4:66652797-66652816 | None:intergenic | 55.0% | |
| GATCACTGAGGTTGCTGGTG+TGG | - | chr3.4:66654506-66654525 | MS.gene048734:CDS | 55.0% | |
| GGAAGGGACACAGAGAAAGC+AGG | - | chr3.4:66655392-66655411 | MS.gene048734:intron | 55.0% | |
| GGCAACGAGCGTAGATTGAC+AGG | - | chr3.4:66655104-66655123 | MS.gene048734:intron | 55.0% | |
| GGCAGCTGCATGTCTCTTGT+TGG | + | chr3.4:66653516-66653535 | None:intergenic | 55.0% | |
| GGTCCAGGAAAACCACCAAC+TGG | + | chr3.4:66653734-66653753 | None:intergenic | 55.0% | |
| TCTTGTTAACGAGTGCCCCC+GGG | - | chr3.4:66654659-66654678 | MS.gene048734:intron | 55.0% | |
| ! | ATGGGGGGATTAGTGCGGTT+GGG | - | chr3.4:66655260-66655279 | MS.gene048734:intron | 55.0% |
| ! | CCCTCAGTTGGTATCTCTGC+TGG | - | chr3.4:66654319-66654338 | MS.gene048734:CDS | 55.0% |
| ! | GTCTTGTTAACGAGTGCCCC+CGG | - | chr3.4:66654658-66654677 | MS.gene048734:intron | 55.0% |
| ! | TATGGGGGGATTAGTGCGGT+TGG | - | chr3.4:66655259-66655278 | MS.gene048734:intron | 55.0% |
| ! | TGAGTTTTCACCTGGGGTCC+AGG | + | chr3.4:66653749-66653768 | None:intergenic | 55.0% |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | + | chr3.4:66654677-66654696 | None:intergenic | 55.0% |
| !! | CGTGGTGCGTCGATTAGAGT+TGG | - | chr3.4:66655371-66655390 | MS.gene048734:intron | 55.0% |
| !! | TTGTGGTGCTGGTGCTGACA+AGG | - | chr3.4:66654053-66654072 | MS.gene048734:intron | 55.0% |
| !!! | GCTGGTGCTGACAAGGCTTT+TGG | - | chr3.4:66654060-66654079 | MS.gene048734:intron | 55.0% |
| !!! | TGGCCAGTTGGTGGTTTTCC+TGG | - | chr3.4:66653728-66653747 | MS.gene048734:intron | 55.0% |
| ACCCTTAACAAGTGCCCCGG+GGG | - | chr3.4:66654791-66654810 | MS.gene048734:intron | 60.0% | |
| CCACCAACTGGCCAACCAAG+AGG | + | chr3.4:66653722-66653741 | None:intergenic | 60.0% | |
| CGGTGGTTTCGGAGAGGTCA+AGG | + | chr3.4:66651891-66651910 | None:intergenic | 60.0% | |
| CTTGTTAACGAGTGCCCCCG+GGG | - | chr3.4:66654660-66654679 | MS.gene048734:intron | 60.0% | |
| TCCAGCACAGGTCAAGCTCC+TGG | - | chr3.4:66652845-66652864 | MS.gene048734:CDS | 60.0% | |
| TCCAGGAGCTTGACCTGTGC+TGG | + | chr3.4:66652849-66652868 | None:intergenic | 60.0% | |
| ! | CCTCTTGGTTGGCCAGTTGG+TGG | - | chr3.4:66653719-66653738 | MS.gene048734:intron | 60.0% |
| ! | TGGCCTCTTGGTTGGCCAGT+TGG | - | chr3.4:66653716-66653735 | MS.gene048734:intron | 60.0% |
| ! | TGGGGGGATTAGTGCGGTTG+GGG | - | chr3.4:66655261-66655280 | MS.gene048734:intron | 60.0% |
| ! | TGGTGGTTTTCCTGGACCCC+AGG | - | chr3.4:66653736-66653755 | MS.gene048734:intron | 60.0% |
| ! | GCCCCCGGGGCACTTGTTAA+GGG | + | chr3.4:66654795-66654814 | None:intergenic | 65.0% |
| ! | GTGGGAATGGGCTCTCCAGC+TGG | + | chr3.4:66653494-66653513 | None:intergenic | 65.0% |
| ! | TGCCCCCGGGGCACTTGTTA+AGG | + | chr3.4:66654796-66654815 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 66651862 | 66655511 | 66651862 | ID=MS.gene048734 |
| chr3.4 | mRNA | 66651862 | 66655511 | 66651862 | ID=MS.gene048734.t1;Parent=MS.gene048734 |
| chr3.4 | exon | 66655438 | 66655511 | 66655438 | ID=MS.gene048734.t1.exon1;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66655438 | 66655511 | 66655438 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66654698 | 66654737 | 66654698 | ID=MS.gene048734.t1.exon2;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66654698 | 66654737 | 66654698 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66654482 | 66654585 | 66654482 | ID=MS.gene048734.t1.exon3;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66654482 | 66654585 | 66654482 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66654314 | 66654362 | 66654314 | ID=MS.gene048734.t1.exon4;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66654314 | 66654362 | 66654314 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66653797 | 66653903 | 66653797 | ID=MS.gene048734.t1.exon5;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66653797 | 66653903 | 66653797 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66653616 | 66653703 | 66653616 | ID=MS.gene048734.t1.exon6;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66653616 | 66653703 | 66653616 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66653203 | 66653331 | 66653203 | ID=MS.gene048734.t1.exon7;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66653203 | 66653331 | 66653203 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66652998 | 66653072 | 66652998 | ID=MS.gene048734.t1.exon8;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66652998 | 66653072 | 66652998 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66652816 | 66652869 | 66652816 | ID=MS.gene048734.t1.exon9;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66652816 | 66652869 | 66652816 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66652460 | 66652497 | 66652460 | ID=MS.gene048734.t1.exon10;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66652460 | 66652497 | 66652460 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66652210 | 66652369 | 66652210 | ID=MS.gene048734.t1.exon11;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66652210 | 66652369 | 66652210 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| chr3.4 | exon | 66651862 | 66652014 | 66651862 | ID=MS.gene048734.t1.exon12;Parent=MS.gene048734.t1 |
| chr3.4 | CDS | 66651862 | 66652014 | 66651862 | ID=cds.MS.gene048734.t1;Parent=MS.gene048734.t1 |
| Gene Sequence |
| Protein sequence |
