Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049162.t1 | XP_003602750.2 | 97.5 | 197 | 4 | 1 | 1 | 197 | 6 | 201 | 3.30E-100 | 374.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049162.t1 | Q8W4I9 | 60.6 | 71 | 27 | 1 | 128 | 197 | 83 | 153 | 7.6e-13 | 75.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049162.t1 | A0A072V1G3 | 97.5 | 197 | 4 | 1 | 1 | 197 | 6 | 201 | 2.4e-100 | 374.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049162 | MS.gene055547 | 0.941518 | 3.62E-101 | -1.69E-46 |
| MS.gene049162 | MS.gene055548 | 0.947607 | 4.84E-106 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049162.t1 | MTR_3g098620 | 97.462 | 197 | 4 | 1 | 1 | 197 | 6 | 201 | 2.08e-129 | 386 |
| MS.gene049162.t1 | MTR_3g098620 | 97.462 | 197 | 4 | 1 | 1 | 197 | 6 | 201 | 2.90e-129 | 385 |
| MS.gene049162.t1 | MTR_3g098620 | 97.462 | 197 | 4 | 1 | 1 | 197 | 6 | 201 | 6.11e-129 | 386 |
| MS.gene049162.t1 | MTR_8g100160 | 59.091 | 198 | 77 | 3 | 1 | 197 | 6 | 200 | 5.68e-66 | 218 |
| MS.gene049162.t1 | MTR_8g100160 | 59.091 | 198 | 77 | 3 | 1 | 197 | 6 | 200 | 6.57e-66 | 218 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 46 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGCTCATATGGTTTAAT+TGG | 0.114750 | 3.2:-81838046 | MS.gene049162:CDS |
| TAATCATCATGAATAGATTT+TGG | 0.178888 | 3.2:+81838990 | None:intergenic |
| GAAACACATTCTTACACTTT+TGG | 0.261999 | 3.2:+81837951 | None:intergenic |
| AAATTGAGGCTGACACTATA+GGG | 0.330989 | 3.2:-81837598 | MS.gene049162:CDS |
| TGCAGAGGAATGTTGGATTA+AGG | 0.349422 | 3.2:-81839016 | MS.gene049162:intron |
| GAAATTGAGGCTGACACTAT+AGG | 0.368667 | 3.2:-81837599 | MS.gene049162:CDS |
| TCTTGGTGCAGTGAGGTTCT+TGG | 0.376145 | 3.2:-81837696 | MS.gene049162:intron |
| CTTGGTGCAGTGAGGTTCTT+GGG | 0.393851 | 3.2:-81837695 | MS.gene049162:intron |
| CTAGCTCATATGGTTTAATT+GGG | 0.413117 | 3.2:-81838045 | MS.gene049162:CDS |
| CAGCCAGCATCTAGCTCATA+TGG | 0.414663 | 3.2:-81838055 | MS.gene049162:CDS |
| AACAAGATTGTCACCAATGC+AGG | 0.425656 | 3.2:-81838022 | MS.gene049162:CDS |
| AGGAAACATCATCATAAAGA+TGG | 0.434351 | 3.2:+81839218 | None:intergenic |
| ATGTCACAGACTAGTTTATC+CGG | 0.437906 | 3.2:-81838190 | MS.gene049162:CDS |
| GCTTTCACGTGCGCCTGCAT+TGG | 0.451678 | 3.2:+81838009 | None:intergenic |
| TGAATTATCACCCGAGATCA+TGG | 0.457507 | 3.2:-81838093 | MS.gene049162:CDS |
| GATTTGTATGGTTCTTCCTC+AGG | 0.464347 | 3.2:+81837629 | None:intergenic |
| ATTTCTTCAAGAGATTTGTA+TGG | 0.466918 | 3.2:+81837617 | None:intergenic |
| CAAATCTCTTGAAGAAATTG+AGG | 0.479991 | 3.2:-81837612 | MS.gene049162:CDS |
| GATAAACTAGTCTGTGACAT+TGG | 0.480263 | 3.2:+81838193 | None:intergenic |
| TTTCATGTGCAGAGGAATGT+TGG | 0.480325 | 3.2:-81839023 | MS.gene049162:intron |
| AGTGAAATGGCAGCTTCACC+TGG | 0.484170 | 3.2:-81838268 | MS.gene049162:CDS |
| GCAGTGAGGTTCTTGGGAAA+TGG | 0.500531 | 3.2:-81837689 | MS.gene049162:intron |
| TGCACATCAGACCATGATCT+CGG | 0.501021 | 3.2:+81838082 | None:intergenic |
| AATAATTACCTCAGAAGCAT+AGG | 0.505187 | 3.2:+81839198 | None:intergenic |
| GAAAACAGATCATCTTCGTC+GGG | 0.524867 | 3.2:+81837566 | None:intergenic |
| AAACCATATGAGCTAGATGC+TGG | 0.540798 | 3.2:+81838052 | None:intergenic |
| GGAAACATCATCATAAAGAT+GGG | 0.545230 | 3.2:+81839219 | None:intergenic |
| TCCTAAACCATCAGTGACAC+CGG | 0.552400 | 3.2:+81837543 | None:intergenic |
| TGTCACAGACTAGTTTATCC+GGG | 0.553964 | 3.2:-81838189 | MS.gene049162:CDS |
| TCTGATCAGAATATTACTGC+TGG | 0.554637 | 3.2:-81837659 | MS.gene049162:CDS |
| AAGCAGTAGTAACACCCCTC+TGG | 0.563767 | 3.2:+81839245 | None:intergenic |
| GCACATCAGACCATGATCTC+GGG | 0.565376 | 3.2:+81838083 | None:intergenic |
| TACTGCTGGTTCTCTTCCTG+AGG | 0.579244 | 3.2:-81837645 | MS.gene049162:CDS |
| ACAGATCATCTTCGTCGGGA+AGG | 0.581398 | 3.2:+81837570 | None:intergenic |
| TGGCATGGTAGATGCGCTGA+AGG | 0.585812 | 3.2:-81838131 | MS.gene049162:CDS |
| GGAAAACAGATCATCTTCGT+CGG | 0.586547 | 3.2:+81837565 | None:intergenic |
| AGATGCGCTGAAGGATTCAA+AGG | 0.602052 | 3.2:-81838122 | MS.gene049162:CDS |
| GATCATGGTCTGATGTGCAT+AGG | 0.608179 | 3.2:-81838078 | MS.gene049162:CDS |
| TGATGTTTCCTATGCTTCTG+AGG | 0.609927 | 3.2:-81839206 | MS.gene049162:intron |
| CCTAAACCATCAGTGACACC+GGG | 0.614554 | 3.2:+81837544 | None:intergenic |
| AATTGAGGCTGACACTATAG+GGG | 0.630862 | 3.2:-81837597 | MS.gene049162:CDS |
| GAAGTGTGCAAAATGCCTCC+AGG | 0.633750 | 3.2:+81838250 | None:intergenic |
| ATTCATGATGATTATCCACA+AGG | 0.660419 | 3.2:-81838981 | MS.gene049162:intron |
| GTCACAGACTAGTTTATCCG+GGG | 0.680067 | 3.2:-81838188 | MS.gene049162:CDS |
| GAAATGGCAGCTTCACCTGG+AGG | 0.683059 | 3.2:-81838265 | MS.gene049162:CDS |
| TTTGAAATAATGAACCAGAG+GGG | 0.758778 | 3.2:-81839259 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GACATGTTTAGAAAAAAAAA+AGG | + | chr3.2:81837752-81837771 | None:intergenic | 20.0% |
| !! | TAAATAAGCAGTTCATTTAA+TGG | - | chr3.2:81838457-81838476 | MS.gene049162:intron | 20.0% |
| !! | TTAAATGAACTGCTTATTTA+TGG | + | chr3.2:81838457-81838476 | None:intergenic | 20.0% |
| !! | TTAGAATAAATAACTATGGA+TGG | - | chr3.2:81838169-81838188 | MS.gene049162:CDS | 20.0% |
| !!! | ATCGTTTATTTCATTTTGTA+GGG | - | chr3.2:81838203-81838222 | MS.gene049162:CDS | 20.0% |
| !!! | GCATTTAGAATAAATAACTA+TGG | - | chr3.2:81838165-81838184 | MS.gene049162:CDS | 20.0% |
| !!! | GGTATTAATAGATTTCTTTT+TGG | - | chr3.2:81838229-81838248 | MS.gene049162:CDS | 20.0% |
| !!! | GTTTTTAATCATGATGATAT+TGG | - | chr3.2:81838374-81838393 | MS.gene049162:intron | 20.0% |
| !!! | TAATCATCATGAATAGATTT+TGG | + | chr3.2:81837816-81837835 | None:intergenic | 20.0% |
| ! | AAAAAAAGGCAATAACATTG+AGG | + | chr3.2:81837738-81837757 | None:intergenic | 25.0% |
| ! | AAAACCAAAATGAGACAATT+CGG | + | chr3.2:81837633-81837652 | None:intergenic | 25.0% |
| ! | ATTTCTTCAAGAGATTTGTA+TGG | + | chr3.2:81839189-81839208 | None:intergenic | 25.0% |
| ! | CTTTGGTTAGTAGATATATA+TGG | + | chr3.2:81837923-81837942 | None:intergenic | 25.0% |
| ! | TAAAAAAACACTCAAAGTCT+TGG | + | chr3.2:81837674-81837693 | None:intergenic | 25.0% |
| ! | TGCATCGTAACAAAATTAAA+TGG | + | chr3.2:81838925-81838944 | None:intergenic | 25.0% |
| !! | AGTTCTATGTTCAAATTTTC+AGG | - | chr3.2:81838508-81838527 | MS.gene049162:intron | 25.0% |
| !! | CATCGTTTATTTCATTTTGT+AGG | - | chr3.2:81838202-81838221 | MS.gene049162:CDS | 25.0% |
| !! | GTTCTATGTTCAAATTTTCA+GGG | - | chr3.2:81838509-81838528 | MS.gene049162:intron | 25.0% |
| !!! | ATGTTTTTTGTTGAGTTCAA+TGG | - | chr3.2:81839044-81839063 | MS.gene049162:intron | 25.0% |
| !!! | GTTTTAGAAAACGTACATTT+TGG | - | chr3.2:81838640-81838659 | MS.gene049162:intron | 25.0% |
| !!! | TATTTTTGCATTTCTTTCGA+GGG | + | chr3.2:81838584-81838603 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTAAACATGTCCT+TGG | - | chr3.2:81837754-81837773 | MS.gene049162:intron | 25.0% |
| AAGTAAACACACACGAATAT+GGG | + | chr3.2:81838429-81838448 | None:intergenic | 30.0% | |
| AGGAAACATCATCATAAAGA+TGG | + | chr3.2:81837588-81837607 | None:intergenic | 30.0% | |
| ATAAAACATCTATACCATCC+TGG | + | chr3.2:81838144-81838163 | None:intergenic | 30.0% | |
| ATTCATGATGATTATCCACA+AGG | - | chr3.2:81837822-81837841 | MS.gene049162:intron | 30.0% | |
| CAAATCTCTTGAAGAAATTG+AGG | - | chr3.2:81839191-81839210 | MS.gene049162:intron | 30.0% | |
| CGACAGTAAAAGTTCAAAAA+TGG | + | chr3.2:81838117-81838136 | None:intergenic | 30.0% | |
| CTAGCTCATATGGTTTAATT+GGG | - | chr3.2:81838758-81838777 | MS.gene049162:intron | 30.0% | |
| CTCGAAAGAAATGCAAAAAT+AGG | - | chr3.2:81838583-81838602 | MS.gene049162:intron | 30.0% | |
| CTGTTCAATTAAAACTAGAG+AGG | + | chr3.2:81838082-81838101 | None:intergenic | 30.0% | |
| GGAAACATCATCATAAAGAT+GGG | + | chr3.2:81837587-81837606 | None:intergenic | 30.0% | |
| GGTAAGGTACACAAAAAATA+TGG | + | chr3.2:81838053-81838072 | None:intergenic | 30.0% | |
| TAAAACATCTATACCATCCT+GGG | + | chr3.2:81838143-81838162 | None:intergenic | 30.0% | |
| TGGACATGTAATTCATTTGT+TGG | - | chr3.2:81838477-81838496 | MS.gene049162:intron | 30.0% | |
| TTAAAACTAGAGAGGTAATC+AGG | + | chr3.2:81838074-81838093 | None:intergenic | 30.0% | |
| ! | AATAATTACCTCAGAAGCAT+AGG | + | chr3.2:81837608-81837627 | None:intergenic | 30.0% |
| ! | AATAGAAAAGTTCCCTTTTC+TGG | + | chr3.2:81839023-81839042 | None:intergenic | 30.0% |
| ! | GAAACACATTCTTACACTTT+TGG | + | chr3.2:81838855-81838874 | None:intergenic | 30.0% |
| ! | GATATAGCTTGCGTAATTAA+TGG | - | chr3.2:81838275-81838294 | MS.gene049162:CDS | 30.0% |
| ! | TCTAGCTCATATGGTTTAAT+TGG | - | chr3.2:81838757-81838776 | MS.gene049162:intron | 30.0% |
| ! | TTATTTCATTTTGTAGGGAG+TGG | - | chr3.2:81838208-81838227 | MS.gene049162:CDS | 30.0% |
| ! | TTTTCCGAATTGTCTCATTT+TGG | - | chr3.2:81837626-81837645 | MS.gene049162:CDS | 30.0% |
| !! | ACACTTTTGGCTAAACATAT+CGG | + | chr3.2:81838842-81838861 | None:intergenic | 30.0% |
| !!! | CTATTTTTGCATTTCTTTCG+AGG | + | chr3.2:81838585-81838604 | None:intergenic | 30.0% |
| AAATTGAGGCTGACACTATA+GGG | - | chr3.2:81839205-81839224 | MS.gene049162:intron | 35.0% | |
| ACCCAATCTCAGAGATATAT+GGG | + | chr3.2:81839074-81839093 | None:intergenic | 35.0% | |
| CAAATGTGAAACAGTGATCA+AGG | + | chr3.2:81837966-81837985 | None:intergenic | 35.0% | |
| CAAGTAAACACACACGAATA+TGG | + | chr3.2:81838430-81838449 | None:intergenic | 35.0% | |
| GAGTGTTAACTATCTGTCTT+TGG | + | chr3.2:81837940-81837959 | None:intergenic | 35.0% | |
| TCTGATCAGAATATTACTGC+TGG | - | chr3.2:81839144-81839163 | MS.gene049162:intron | 35.0% | |
| ! | GATAAACTAGTCTGTGACAT+TGG | + | chr3.2:81838613-81838632 | None:intergenic | 35.0% |
| ! | TGGAGTGTTAATGTCATAGT+AGG | + | chr3.2:81837903-81837922 | None:intergenic | 35.0% |
| !! | ATGTCACAGACTAGTTTATC+CGG | - | chr3.2:81838613-81838632 | MS.gene049162:intron | 35.0% |
| !! | ATTTTCAGGGAAGAGTGAAA+TGG | - | chr3.2:81838522-81838541 | MS.gene049162:intron | 35.0% |
| !! | TCCCATATATCTCTGAGATT+GGG | - | chr3.2:81839070-81839089 | MS.gene049162:intron | 35.0% |
| !! | TTCCCATATATCTCTGAGAT+TGG | - | chr3.2:81839069-81839088 | MS.gene049162:intron | 35.0% |
| !!! | TACGTTTTCTAAAACTTCCC+CGG | + | chr3.2:81838635-81838654 | None:intergenic | 35.0% |
| AAACCATATGAGCTAGATGC+TGG | + | chr3.2:81838754-81838773 | None:intergenic | 40.0% | |
| AACAAGATTGTCACCAATGC+AGG | - | chr3.2:81838781-81838800 | MS.gene049162:intron | 40.0% | |
| AATTGAGGCTGACACTATAG+GGG | - | chr3.2:81839206-81839225 | MS.gene049162:intron | 40.0% | |
| ACTAGAGAGGTAATCAGGTA+AGG | + | chr3.2:81838069-81838088 | None:intergenic | 40.0% | |
| AGGAAACCAGCATGACATAT+AGG | + | chr3.2:81837883-81837902 | None:intergenic | 40.0% | |
| AGTACATGAGATCGAGAAGT+CGG | + | chr3.2:81837709-81837728 | None:intergenic | 40.0% | |
| CACCCAATCTCAGAGATATA+TGG | + | chr3.2:81839075-81839094 | None:intergenic | 40.0% | |
| GAAAACAGATCATCTTCGTC+GGG | + | chr3.2:81839240-81839259 | None:intergenic | 40.0% | |
| GAAATTGAGGCTGACACTAT+AGG | - | chr3.2:81839204-81839223 | MS.gene049162:intron | 40.0% | |
| GATTTGTATGGTTCTTCCTC+AGG | + | chr3.2:81839177-81839196 | None:intergenic | 40.0% | |
| GGAAAACAGATCATCTTCGT+CGG | + | chr3.2:81839241-81839260 | None:intergenic | 40.0% | |
| GGGTGTTTGTATGCATATCT+TGG | - | chr3.2:81839090-81839109 | MS.gene049162:intron | 40.0% | |
| TAGAGTCCTATATGTCATGC+TGG | - | chr3.2:81837874-81837893 | MS.gene049162:intron | 40.0% | |
| TGAATTATCACCCGAGATCA+TGG | - | chr3.2:81838710-81838729 | MS.gene049162:intron | 40.0% | |
| TGATGATTATCCACAAGGTG+AGG | - | chr3.2:81837827-81837846 | MS.gene049162:intron | 40.0% | |
| TGATGTTTCCTATGCTTCTG+AGG | - | chr3.2:81837597-81837616 | MS.gene049162:CDS | 40.0% | |
| TGCAGAGGAATGTTGGATTA+AGG | - | chr3.2:81837787-81837806 | MS.gene049162:intron | 40.0% | |
| TTTCATGTGCAGAGGAATGT+TGG | - | chr3.2:81837780-81837799 | MS.gene049162:intron | 40.0% | |
| ! | ACGAAGATGATCTGTTTTCC+CGG | - | chr3.2:81839241-81839260 | MS.gene049162:CDS | 40.0% |
| ! | AGAAAAGTTCCCTTTTCTGG+TGG | + | chr3.2:81839020-81839039 | None:intergenic | 40.0% |
| !! | AAAAGTTCCCTTTTCTGGTG+GGG | + | chr3.2:81839018-81839037 | None:intergenic | 40.0% |
| !! | GAAAAGTTCCCTTTTCTGGT+GGG | + | chr3.2:81839019-81839038 | None:intergenic | 40.0% |
| !! | TGTCACAGACTAGTTTATCC+GGG | - | chr3.2:81838614-81838633 | MS.gene049162:intron | 40.0% |
| AGATGCGCTGAAGGATTCAA+AGG | - | chr3.2:81838681-81838700 | MS.gene049162:intron | 45.0% | |
| AGTTGATTGACCTCACCTTG+TGG | + | chr3.2:81837840-81837859 | None:intergenic | 45.0% | |
| CTCTGCACATGAAAAGTCCA+AGG | + | chr3.2:81837774-81837793 | None:intergenic | 45.0% | |
| GATCATGGTCTGATGTGCAT+AGG | - | chr3.2:81838725-81838744 | MS.gene049162:intron | 45.0% | |
| TGCACATCAGACCATGATCT+CGG | + | chr3.2:81838724-81838743 | None:intergenic | 45.0% | |
| ! | AACTTTTACTGTCGTTGCCC+AGG | - | chr3.2:81838123-81838142 | MS.gene049162:CDS | 45.0% |
| ! | ATGCATATCTTGGTGCAGTG+AGG | - | chr3.2:81839100-81839119 | MS.gene049162:intron | 45.0% |
| ! | CTTGGACTTTTCATGTGCAG+AGG | - | chr3.2:81837772-81837791 | MS.gene049162:intron | 45.0% |
| !! | GTACATTTTGGTGCACAAGC+TGG | - | chr3.2:81838652-81838671 | MS.gene049162:intron | 45.0% |
| !! | GTCACAGACTAGTTTATCCG+GGG | - | chr3.2:81838615-81838634 | MS.gene049162:intron | 45.0% |
| AAGCAGTAGTAACACCCCTC+TGG | + | chr3.2:81837561-81837580 | None:intergenic | 50.0% | |
| ACAGATCATCTTCGTCGGGA+AGG | + | chr3.2:81839236-81839255 | None:intergenic | 50.0% | |
| AGTGAAATGGCAGCTTCACC+TGG | - | chr3.2:81838535-81838554 | MS.gene049162:intron | 50.0% | |
| GAAGTGTGCAAAATGCCTCC+AGG | + | chr3.2:81838556-81838575 | None:intergenic | 50.0% | |
| GCACATCAGACCATGATCTC+GGG | + | chr3.2:81838723-81838742 | None:intergenic | 50.0% | |
| GCAGTGAGGTTCTTGGGAAA+TGG | - | chr3.2:81839114-81839133 | MS.gene049162:intron | 50.0% | |
| TTTACTGTCGTTGCCCAGGA+TGG | - | chr3.2:81838127-81838146 | MS.gene049162:CDS | 50.0% | |
| ! | CAGCCAGCATCTAGCTCATA+TGG | - | chr3.2:81838748-81838767 | MS.gene049162:intron | 50.0% |
| ! | CTTGGTGCAGTGAGGTTCTT+GGG | - | chr3.2:81839108-81839127 | MS.gene049162:intron | 50.0% |
| ! | TCTTGGTGCAGTGAGGTTCT+TGG | - | chr3.2:81839107-81839126 | MS.gene049162:intron | 50.0% |
| !! | TACTGCTGGTTCTCTTCCTG+AGG | - | chr3.2:81839158-81839177 | MS.gene049162:intron | 50.0% |
| !! | TTTTGGTGCACAAGCTGGCA+TGG | - | chr3.2:81838657-81838676 | MS.gene049162:intron | 50.0% |
| GAAATGGCAGCTTCACCTGG+AGG | - | chr3.2:81838538-81838557 | MS.gene049162:intron | 55.0% | |
| GCCAGAACCCCACCAGAAAA+GGG | - | chr3.2:81839008-81839027 | MS.gene049162:CDS | 55.0% | |
| TGGCATGGTAGATGCGCTGA+AGG | - | chr3.2:81838672-81838691 | MS.gene049162:intron | 55.0% | |
| !! | TCCCTTTTCTGGTGGGGTTC+TGG | + | chr3.2:81839012-81839031 | None:intergenic | 55.0% |
| CGCCAGAACCCCACCAGAAA+AGG | - | chr3.2:81839007-81839026 | MS.gene049162:CDS | 60.0% | |
| GCTTTCACGTGCGCCTGCAT+TGG | + | chr3.2:81838797-81838816 | None:intergenic | 60.0% | |
| CGAACGTGTGTGGGGGTGGT+GGG | + | chr3.2:81838981-81839000 | None:intergenic | 65.0% | |
| CGCGCGTGCGAACGTGTGTG+GGG | + | chr3.2:81838989-81839008 | None:intergenic | 70.0% | |
| CGTGCGAACGTGTGTGGGGG+TGG | + | chr3.2:81838985-81839004 | None:intergenic | 70.0% | |
| GCGAACGTGTGTGGGGGTGG+TGG | + | chr3.2:81838982-81839001 | None:intergenic | 70.0% | |
| GCGCGCGTGCGAACGTGTGT+GGG | + | chr3.2:81838990-81839009 | None:intergenic | 70.0% | |
| GCGCGTGCGAACGTGTGTGG+GGG | + | chr3.2:81838988-81839007 | None:intergenic | 70.0% | |
| GGCGCGCGTGCGAACGTGTG+TGG | + | chr3.2:81838991-81839010 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 81837553 | 81839272 | 81837553 | ID=MS.gene049162 |
| chr3.2 | mRNA | 81837553 | 81839272 | 81837553 | ID=MS.gene049162.t1;Parent=MS.gene049162 |
| chr3.2 | exon | 81839207 | 81839272 | 81839207 | ID=MS.gene049162.t1.exon1;Parent=MS.gene049162.t1 |
| chr3.2 | CDS | 81839207 | 81839272 | 81839207 | ID=cds.MS.gene049162.t1;Parent=MS.gene049162.t1 |
| chr3.2 | exon | 81838982 | 81839033 | 81838982 | ID=MS.gene049162.t1.exon2;Parent=MS.gene049162.t1 |
| chr3.2 | CDS | 81838982 | 81839033 | 81838982 | ID=cds.MS.gene049162.t1;Parent=MS.gene049162.t1 |
| chr3.2 | exon | 81837966 | 81838295 | 81837966 | ID=MS.gene049162.t1.exon3;Parent=MS.gene049162.t1 |
| chr3.2 | CDS | 81837966 | 81838295 | 81837966 | ID=cds.MS.gene049162.t1;Parent=MS.gene049162.t1 |
| chr3.2 | exon | 81837553 | 81837707 | 81837553 | ID=MS.gene049162.t1.exon4;Parent=MS.gene049162.t1 |
| chr3.2 | CDS | 81837553 | 81837707 | 81837553 | ID=cds.MS.gene049162.t1;Parent=MS.gene049162.t1 |
| Gene Sequence |
| Protein sequence |
