Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049403.t1 | XP_013461508.1 | 94.5 | 219 | 7 | 4 | 1 | 216 | 1 | 217 | 2.10E-106 | 395.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049403.t1 | A0A072V2F8 | 94.5 | 219 | 7 | 4 | 1 | 216 | 1 | 217 | 1.5e-106 | 395.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049403 | MS.gene064135 | 0.809823 | 1.56E-50 | -1.69E-46 |
| MS.gene049403 | MS.gene06532 | 0.86365 | 2.14E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049403.t1 | MTR_3g093970 | 93.607 | 219 | 9 | 4 | 1 | 216 | 1 | 217 | 6.60e-129 | 364 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049403.t1 | AT5G05250 | 55.944 | 143 | 60 | 2 | 86 | 226 | 86 | 227 | 8.67e-40 | 137 |
| MS.gene049403.t1 | AT3G56360 | 41.489 | 188 | 96 | 6 | 34 | 216 | 31 | 209 | 1.36e-33 | 121 |
Find 83 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACGATCATTAGCACTAAT+TGG | 0.223351 | 3.1:-75152597 | MS.gene049403:CDS |
| GTTATATTTGTGGAGGAATT+GGG | 0.248067 | 3.1:-75153006 | MS.gene049403:CDS |
| GGTTATATTTGTGGAGGAAT+TGG | 0.264874 | 3.1:-75153007 | MS.gene049403:CDS |
| GTTGGGTCTGGACCGGGTTC+AGG | 0.300482 | 3.1:-75152856 | MS.gene049403:CDS |
| TTATATTTGTGGAGGAATTG+GGG | 0.360867 | 3.1:-75153005 | MS.gene049403:CDS |
| TCTGGACCGGGTTCAGGAAT+GGG | 0.379867 | 3.1:-75152850 | MS.gene049403:CDS |
| GACGGAGAAGGTGGAGGATT+GGG | 0.384900 | 3.1:-75153079 | MS.gene049403:CDS |
| AAAACGAGCCGGGTTGGGTC+TGG | 0.389519 | 3.1:-75152868 | MS.gene049403:CDS |
| TGGAACGTAATGGGAAGAAC+AGG | 0.405040 | 3.1:-75153248 | MS.gene049403:CDS |
| GGAGGATTGGGAGGCTGTGA+AGG | 0.411187 | 3.1:-75153067 | MS.gene049403:CDS |
| AACAACGAATGAAGCTGTTC+AGG | 0.411540 | 3.1:-75153220 | MS.gene049403:CDS |
| AGATGATTGTGGAACGTAAT+GGG | 0.415578 | 3.1:-75153257 | MS.gene049403:CDS |
| GTTCTGTTGCGATCGGTGAT+TGG | 0.423534 | 3.1:-75153347 | MS.gene049403:CDS |
| TGTTGAAAACGAGCCGGGTT+GGG | 0.427346 | 3.1:-75152873 | MS.gene049403:CDS |
| GTCTGGACCGGGTTCAGGAA+TGG | 0.435512 | 3.1:-75152851 | MS.gene049403:CDS |
| CGACGGAGAAGGTGGAGGAT+TGG | 0.436970 | 3.1:-75153080 | MS.gene049403:CDS |
| GAGCCGGGTTGGGTCTGGAC+CGG | 0.437835 | 3.1:-75152863 | MS.gene049403:CDS |
| GGGAGGCTGTGAAGGAGAGA+TGG | 0.438554 | 3.1:-75153059 | MS.gene049403:CDS |
| GTGGATGAGGGAATCGGTGG+TGG | 0.441944 | 3.1:-75153178 | MS.gene049403:CDS |
| CTCGATCGACGGTGAAGAAA+GGG | 0.442589 | 3.1:-75153323 | MS.gene049403:CDS |
| CGTTTAACCGCCGGAGTTGG+TGG | 0.448577 | 3.1:-75153414 | MS.gene049403:CDS |
| GGAGGCTGTGAAGGAGAGAT+GGG | 0.458250 | 3.1:-75153058 | MS.gene049403:CDS |
| ATGGCGTCTTCGTCGTCTCT+AGG | 0.462063 | 3.1:-75153450 | MS.gene049403:CDS |
| GGGGTTGTGGTTCAAGGAAA+AGG | 0.464208 | 3.1:-75152922 | MS.gene049403:CDS |
| ACTCGATCGACGGTGAAGAA+AGG | 0.467484 | 3.1:-75153324 | MS.gene049403:CDS |
| TTTGAAGGAAGCACCGTTGT+TGG | 0.467700 | 3.1:-75153142 | MS.gene049403:CDS |
| GAAGATGAGGCGGAGGACGG+TGG | 0.468835 | 3.1:-75152982 | MS.gene049403:CDS |
| GTGGTTCAAGGAAAAGGTGT+TGG | 0.473560 | 3.1:-75152916 | MS.gene049403:CDS |
| CTCCGGCATCGGAGTTTCAC+CGG | 0.481531 | 3.1:+75153032 | None:intergenic |
| AGGCTCAAGAGAAGCTTGAT+AGG | 0.482412 | 3.1:-75153200 | MS.gene049403:CDS |
| AGCCGGGTTGGGTCTGGACC+GGG | 0.486033 | 3.1:-75152862 | MS.gene049403:CDS |
| GCGGAGGACGGTGGTGAAAG+AGG | 0.486596 | 3.1:-75152973 | MS.gene049403:CDS |
| TGGTTCAAGGAAAAGGTGTT+GGG | 0.496589 | 3.1:-75152915 | MS.gene049403:CDS |
| GACCGGTGAAACTCCGATGC+CGG | 0.500656 | 3.1:-75153034 | MS.gene049403:CDS |
| AAGATGATTGTGGAACGTAA+TGG | 0.505563 | 3.1:-75153258 | MS.gene049403:CDS |
| TTATTTGTTGAAAACGAGCC+GGG | 0.518152 | 3.1:-75152878 | MS.gene049403:CDS |
| GAAGCTTGATAGGTGGATGA+GGG | 0.520578 | 3.1:-75153190 | MS.gene049403:CDS |
| AATCGTTTAACCGCCGGAGT+TGG | 0.521448 | 3.1:-75153417 | MS.gene049403:CDS |
| CGGAGGACGGTGGTGAAAGA+GGG | 0.521733 | 3.1:-75152972 | MS.gene049403:CDS |
| TGAAACTCCGATGCCGGAGG+GGG | 0.528209 | 3.1:-75153028 | MS.gene049403:CDS |
| GTGAAGGAGAGATGGGAGAC+CGG | 0.529770 | 3.1:-75153051 | MS.gene049403:CDS |
| AGAAGCTTGATAGGTGGATG+AGG | 0.532276 | 3.1:-75153191 | MS.gene049403:CDS |
| GAAGATCTCTGCGGTGGCGA+CGG | 0.532705 | 3.1:-75153301 | MS.gene049403:CDS |
| TGATAGGTGGATGAGGGAAT+CGG | 0.532849 | 3.1:-75153184 | MS.gene049403:CDS |
| AACCCGGTCCAGACCCAACC+CGG | 0.533521 | 3.1:+75152860 | None:intergenic |
| GTTAGCGACGGAGAAGGTGG+AGG | 0.540240 | 3.1:-75153085 | MS.gene049403:CDS |
| GGGGAAGATGAGGCGGAGGA+CGG | 0.540891 | 3.1:-75152985 | MS.gene049403:CDS |
| GTGAAACTCCGATGCCGGAG+GGG | 0.541916 | 3.1:-75153029 | MS.gene049403:CDS |
| GAAGTTAGCGACGGAGAAGG+TGG | 0.543641 | 3.1:-75153088 | MS.gene049403:CDS |
| TTGTTGAAAACGAGCCGGGT+TGG | 0.551851 | 3.1:-75152874 | MS.gene049403:CDS |
| AAAAGGTGTTGGGTGTGACC+CGG | 0.554245 | 3.1:-75152905 | MS.gene049403:CDS |
| GTTATTTGTTGAAAACGAGC+CGG | 0.556951 | 3.1:-75152879 | MS.gene049403:CDS |
| GGAGATTGTGAAGAATTTGA+AGG | 0.558302 | 3.1:-75153157 | MS.gene049403:CDS |
| TCTTCGTCGTCTCTAGGTAT+CGG | 0.558850 | 3.1:-75153444 | MS.gene049403:CDS |
| CTTCTGAATACCACCAACTC+CGG | 0.568440 | 3.1:+75153404 | None:intergenic |
| AAGAAAGAACGACGAAGATG+TGG | 0.568911 | 3.1:-75152945 | MS.gene049403:CDS |
| TACGAAGTTAGCGACGGAGA+AGG | 0.580644 | 3.1:-75153091 | MS.gene049403:CDS |
| GGAGAAGGTGGAGGATTGGG+AGG | 0.588439 | 3.1:-75153076 | MS.gene049403:CDS |
| AGAAAGAACGACGAAGATGT+GGG | 0.592121 | 3.1:-75152944 | MS.gene049403:CDS |
| GCATAAACTTGCACCAACAA+CGG | 0.598610 | 3.1:+75153129 | None:intergenic |
| GGCGACGGCGACGACTGTGA+CGG | 0.602177 | 3.1:-75153286 | MS.gene049403:CDS |
| CCAATTAGTGCTAATGATCG+TGG | 0.606530 | 3.1:+75152597 | None:intergenic |
| CGGTGAAACTCCGATGCCGG+AGG | 0.608715 | 3.1:-75153031 | MS.gene049403:CDS |
| GGTGAAACTCCGATGCCGGA+GGG | 0.615054 | 3.1:-75153030 | MS.gene049403:CDS |
| AAAACACCCATTCCTGAACC+CGG | 0.615401 | 3.1:+75152844 | None:intergenic |
| GGAAACAATCGTTTAACCGC+CGG | 0.619806 | 3.1:-75153423 | MS.gene049403:CDS |
| CGGTGATTGGACTCGATCGA+CGG | 0.620655 | 3.1:-75153334 | MS.gene049403:CDS |
| TATATTTGTGGAGGAATTGG+GGG | 0.628775 | 3.1:-75153004 | MS.gene049403:CDS |
| GAAAGAACGACGAAGATGTG+GGG | 0.629964 | 3.1:-75152943 | MS.gene049403:CDS |
| TAGGTGGATGAGGGAATCGG+TGG | 0.633045 | 3.1:-75153181 | MS.gene049403:CDS |
| AAAGAACGACGAAGATGTGG+GGG | 0.634814 | 3.1:-75152942 | MS.gene049403:CDS |
| CTCAAGAGAAGCTTGATAGG+TGG | 0.638974 | 3.1:-75153197 | MS.gene049403:CDS |
| GGAACGTAATGGGAAGAACA+GGG | 0.641411 | 3.1:-75153247 | MS.gene049403:CDS |
| CAGAACACGTCACTACTGAT+CGG | 0.652599 | 3.1:+75153364 | None:intergenic |
| GAAAGGGAAGATCTCTGCGG+TGG | 0.655820 | 3.1:-75153307 | MS.gene049403:CDS |
| CTGAATACCACCAACTCCGG+CGG | 0.657189 | 3.1:+75153407 | None:intergenic |
| GTGACGTGTTCTGTTGCGAT+CGG | 0.671449 | 3.1:-75153354 | MS.gene049403:CDS |
| GAACGTAATGGGAAGAACAG+GGG | 0.672347 | 3.1:-75153246 | MS.gene049403:CDS |
| GACGGCGAATAAGATGATTG+TGG | 0.679352 | 3.1:-75153268 | MS.gene049403:CDS |
| AGACAATACGAAGTTAGCGA+CGG | 0.691790 | 3.1:-75153097 | MS.gene049403:CDS |
| CGTAATGGGAAGAACAGGGG+AGG | 0.717284 | 3.1:-75153243 | MS.gene049403:CDS |
| AAGAACGACGAAGATGTGGG+GGG | 0.740066 | 3.1:-75152941 | MS.gene049403:CDS |
| GAAGAAAGGGAAGATCTCTG+CGG | 0.780721 | 3.1:-75153310 | MS.gene049403:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGATATATCAAACAAAGATG+TGG | - | chr3.1:75153380-75153399 | MS.gene049403:CDS | 25.0% |
| !! | GTTTTCAACAAATAACAAAC+CGG | + | chr3.1:75153137-75153156 | None:intergenic | 25.0% |
| !! | TTTTCAACAAATAACAAACC+GGG | + | chr3.1:75153136-75153155 | None:intergenic | 25.0% |
| AGTCTCAACTTAAGAATTGT+TGG | - | chr3.1:75153249-75153268 | MS.gene049403:CDS | 30.0% | |
| GTTATATTTGTGGAGGAATT+GGG | - | chr3.1:75153014-75153033 | MS.gene049403:CDS | 30.0% | |
| TTATATTTGTGGAGGAATTG+GGG | - | chr3.1:75153015-75153034 | MS.gene049403:CDS | 30.0% | |
| AAGATGATTGTGGAACGTAA+TGG | - | chr3.1:75152762-75152781 | MS.gene049403:intron | 35.0% | |
| ACAAAGATGTGGATCTGTAT+AGG | - | chr3.1:75153391-75153410 | MS.gene049403:CDS | 35.0% | |
| AGATGATTGTGGAACGTAAT+GGG | - | chr3.1:75152763-75152782 | MS.gene049403:intron | 35.0% | |
| CAAAGATGTGGATCTGTATA+GGG | - | chr3.1:75153392-75153411 | MS.gene049403:CDS | 35.0% | |
| CACTCTCACCAAACAAAAAT+GGG | + | chr3.1:75153207-75153226 | None:intergenic | 35.0% | |
| GGAGATTGTGAAGAATTTGA+AGG | - | chr3.1:75152863-75152882 | MS.gene049403:CDS | 35.0% | |
| GGTTATATTTGTGGAGGAAT+TGG | - | chr3.1:75153013-75153032 | MS.gene049403:CDS | 35.0% | |
| TATATTTGTGGAGGAATTGG+GGG | - | chr3.1:75153016-75153035 | MS.gene049403:CDS | 35.0% | |
| TCACTCTCACCAAACAAAAA+TGG | + | chr3.1:75153208-75153227 | None:intergenic | 35.0% | |
| ! | GTTATTTGTTGAAAACGAGC+CGG | - | chr3.1:75153141-75153160 | MS.gene049403:CDS | 35.0% |
| ! | TTATTTGTTGAAAACGAGCC+GGG | - | chr3.1:75153142-75153161 | MS.gene049403:CDS | 35.0% |
| !! | ATTCTTAAGTTGAGACTGTG+CGG | + | chr3.1:75153246-75153265 | None:intergenic | 35.0% |
| !! | TTTCTCGACCCATTTTTGTT+TGG | - | chr3.1:75153196-75153215 | MS.gene049403:CDS | 35.0% |
| AACAACGAATGAAGCTGTTC+AGG | - | chr3.1:75152800-75152819 | MS.gene049403:intron | 40.0% | |
| AAGAAAGAACGACGAAGATG+TGG | - | chr3.1:75153075-75153094 | MS.gene049403:CDS | 40.0% | |
| AGAAAGAACGACGAAGATGT+GGG | - | chr3.1:75153076-75153095 | MS.gene049403:CDS | 40.0% | |
| AGACAATACGAAGTTAGCGA+CGG | - | chr3.1:75152923-75152942 | MS.gene049403:CDS | 40.0% | |
| CCAATTAGTGCTAATGATCG+TGG | + | chr3.1:75153426-75153445 | None:intergenic | 40.0% | |
| CCACGATCATTAGCACTAAT+TGG | - | chr3.1:75153423-75153442 | MS.gene049403:CDS | 40.0% | |
| GCATAAACTTGCACCAACAA+CGG | + | chr3.1:75152894-75152913 | None:intergenic | 40.0% | |
| GTTGGCTATTGCAAAGTCAT+TGG | - | chr3.1:75153267-75153286 | MS.gene049403:CDS | 40.0% | |
| !! | TGGTTCAAGGAAAAGGTGTT+GGG | - | chr3.1:75153105-75153124 | MS.gene049403:CDS | 40.0% |
| AAAACACCCATTCCTGAACC+CGG | + | chr3.1:75153179-75153198 | None:intergenic | 45.0% | |
| AAAGAACGACGAAGATGTGG+GGG | - | chr3.1:75153078-75153097 | MS.gene049403:CDS | 45.0% | |
| AGAAGCTTGATAGGTGGATG+AGG | - | chr3.1:75152829-75152848 | MS.gene049403:CDS | 45.0% | |
| AGGCTCAAGAGAAGCTTGAT+AGG | - | chr3.1:75152820-75152839 | MS.gene049403:intron | 45.0% | |
| CAGAACACGTCACTACTGAT+CGG | + | chr3.1:75152659-75152678 | None:intergenic | 45.0% | |
| CTCAAGAGAAGCTTGATAGG+TGG | - | chr3.1:75152823-75152842 | MS.gene049403:intron | 45.0% | |
| CTTCTGAATACCACCAACTC+CGG | + | chr3.1:75152619-75152638 | None:intergenic | 45.0% | |
| GAAAGAACGACGAAGATGTG+GGG | - | chr3.1:75153077-75153096 | MS.gene049403:CDS | 45.0% | |
| GAAGAAAGGGAAGATCTCTG+CGG | - | chr3.1:75152710-75152729 | MS.gene049403:intron | 45.0% | |
| GAAGCTTGATAGGTGGATGA+GGG | - | chr3.1:75152830-75152849 | MS.gene049403:CDS | 45.0% | |
| GACGGCGAATAAGATGATTG+TGG | - | chr3.1:75152752-75152771 | MS.gene049403:intron | 45.0% | |
| GGAAACAATCGTTTAACCGC+CGG | - | chr3.1:75152597-75152616 | MS.gene049403:CDS | 45.0% | |
| TCCACAAATATAACCCCCTC+CGG | + | chr3.1:75153008-75153027 | None:intergenic | 45.0% | |
| TCTTCGTCGTCTCTAGGTAT+CGG | - | chr3.1:75152576-75152595 | MS.gene049403:CDS | 45.0% | |
| TGATAGGTGGATGAGGGAAT+CGG | - | chr3.1:75152836-75152855 | MS.gene049403:CDS | 45.0% | |
| ! | GAACGTAATGGGAAGAACAG+GGG | - | chr3.1:75152774-75152793 | MS.gene049403:intron | 45.0% |
| ! | GGAACGTAATGGGAAGAACA+GGG | - | chr3.1:75152773-75152792 | MS.gene049403:intron | 45.0% |
| ! | GTGGTTCAAGGAAAAGGTGT+TGG | - | chr3.1:75153104-75153123 | MS.gene049403:CDS | 45.0% |
| ! | TGGAACGTAATGGGAAGAAC+AGG | - | chr3.1:75152772-75152791 | MS.gene049403:intron | 45.0% |
| !! | TTTGAAGGAAGCACCGTTGT+TGG | - | chr3.1:75152878-75152897 | MS.gene049403:CDS | 45.0% |
| AAGAACGACGAAGATGTGGG+GGG | - | chr3.1:75153079-75153098 | MS.gene049403:CDS | 50.0% | |
| AATATAACCCCCTCCGGCAT+CGG | + | chr3.1:75153002-75153021 | None:intergenic | 50.0% | |
| AATCGTTTAACCGCCGGAGT+TGG | - | chr3.1:75152603-75152622 | MS.gene049403:CDS | 50.0% | |
| ACTCGATCGACGGTGAAGAA+AGG | - | chr3.1:75152696-75152715 | MS.gene049403:intron | 50.0% | |
| CTCGATCGACGGTGAAGAAA+GGG | - | chr3.1:75152697-75152716 | MS.gene049403:intron | 50.0% | |
| GGAGGGGGTTATATTTGTGG+AGG | - | chr3.1:75153007-75153026 | MS.gene049403:CDS | 50.0% | |
| GGGGTTGTGGTTCAAGGAAA+AGG | - | chr3.1:75153098-75153117 | MS.gene049403:CDS | 50.0% | |
| GTGACGTGTTCTGTTGCGAT+CGG | - | chr3.1:75152666-75152685 | MS.gene049403:intron | 50.0% | |
| GTTCTGTTGCGATCGGTGAT+TGG | - | chr3.1:75152673-75152692 | MS.gene049403:intron | 50.0% | |
| TACGAAGTTAGCGACGGAGA+AGG | - | chr3.1:75152929-75152948 | MS.gene049403:CDS | 50.0% | |
| TGTTGAAAACGAGCCGGGTT+GGG | - | chr3.1:75153147-75153166 | MS.gene049403:CDS | 50.0% | |
| TTGTTGAAAACGAGCCGGGT+TGG | - | chr3.1:75153146-75153165 | MS.gene049403:CDS | 50.0% | |
| !! | AAAAGGTGTTGGGTGTGACC+CGG | - | chr3.1:75153115-75153134 | MS.gene049403:CDS | 50.0% |
| ATGGCGTCTTCGTCGTCTCT+AGG | - | chr3.1:75152570-75152589 | MS.gene049403:CDS | 55.0% | |
| ATGTGGGGGGTTGTGGTTCA+AGG | - | chr3.1:75153092-75153111 | MS.gene049403:CDS | 55.0% | |
| CGGTGATTGGACTCGATCGA+CGG | - | chr3.1:75152686-75152705 | MS.gene049403:intron | 55.0% | |
| CTGAATACCACCAACTCCGG+CGG | + | chr3.1:75152616-75152635 | None:intergenic | 55.0% | |
| GAAAGGGAAGATCTCTGCGG+TGG | - | chr3.1:75152713-75152732 | MS.gene049403:intron | 55.0% | |
| GAAGTTAGCGACGGAGAAGG+TGG | - | chr3.1:75152932-75152951 | MS.gene049403:CDS | 55.0% | |
| GACGGAGAAGGTGGAGGATT+GGG | - | chr3.1:75152941-75152960 | MS.gene049403:CDS | 55.0% | |
| GCCGGAGGGGGTTATATTTG+TGG | - | chr3.1:75153004-75153023 | MS.gene049403:CDS | 55.0% | |
| GGAATTGGGGGAAGATGAGG+CGG | - | chr3.1:75153028-75153047 | MS.gene049403:CDS | 55.0% | |
| GGAGGAATTGGGGGAAGATG+AGG | - | chr3.1:75153025-75153044 | MS.gene049403:CDS | 55.0% | |
| GGAGGCTGTGAAGGAGAGAT+GGG | - | chr3.1:75152962-75152981 | MS.gene049403:CDS | 55.0% | |
| GTGAAGGAGAGATGGGAGAC+CGG | - | chr3.1:75152969-75152988 | MS.gene049403:CDS | 55.0% | |
| TAGGTGGATGAGGGAATCGG+TGG | - | chr3.1:75152839-75152858 | MS.gene049403:CDS | 55.0% | |
| TCTGGACCGGGTTCAGGAAT+GGG | - | chr3.1:75153170-75153189 | MS.gene049403:CDS | 55.0% | |
| ! | CGTAATGGGAAGAACAGGGG+AGG | - | chr3.1:75152777-75152796 | MS.gene049403:intron | 55.0% |
| ATTGGGGGAAGATGAGGCGG+AGG | - | chr3.1:75153031-75153050 | MS.gene049403:CDS | 60.0% | |
| CGACGGAGAAGGTGGAGGAT+TGG | - | chr3.1:75152940-75152959 | MS.gene049403:CDS | 60.0% | |
| CGGAGGACGGTGGTGAAAGA+GGG | - | chr3.1:75153048-75153067 | MS.gene049403:CDS | 60.0% | |
| CGTTTAACCGCCGGAGTTGG+TGG | - | chr3.1:75152606-75152625 | MS.gene049403:CDS | 60.0% | |
| GAAGATCTCTGCGGTGGCGA+CGG | - | chr3.1:75152719-75152738 | MS.gene049403:intron | 60.0% | |
| GACCGGTGAAACTCCGATGC+CGG | - | chr3.1:75152986-75153005 | MS.gene049403:CDS | 60.0% | |
| GACGAAGATGTGGGGGGTTG+TGG | - | chr3.1:75153085-75153104 | MS.gene049403:CDS | 60.0% | |
| GGAGAAGGTGGAGGATTGGG+AGG | - | chr3.1:75152944-75152963 | MS.gene049403:CDS | 60.0% | |
| GGAGGATTGGGAGGCTGTGA+AGG | - | chr3.1:75152953-75152972 | MS.gene049403:CDS | 60.0% | |
| GGGAGGCTGTGAAGGAGAGA+TGG | - | chr3.1:75152961-75152980 | MS.gene049403:CDS | 60.0% | |
| GGTGAAACTCCGATGCCGGA+GGG | - | chr3.1:75152990-75153009 | MS.gene049403:CDS | 60.0% | |
| GTCTGGACCGGGTTCAGGAA+TGG | - | chr3.1:75153169-75153188 | MS.gene049403:CDS | 60.0% | |
| GTGAAACTCCGATGCCGGAG+GGG | - | chr3.1:75152991-75153010 | MS.gene049403:CDS | 60.0% | |
| GTGGATGAGGGAATCGGTGG+TGG | - | chr3.1:75152842-75152861 | MS.gene049403:CDS | 60.0% | |
| GTTAGCGACGGAGAAGGTGG+AGG | - | chr3.1:75152935-75152954 | MS.gene049403:CDS | 60.0% | |
| TGAAACTCCGATGCCGGAGG+GGG | - | chr3.1:75152992-75153011 | MS.gene049403:CDS | 60.0% | |
| ! | AAAACGAGCCGGGTTGGGTC+TGG | - | chr3.1:75153152-75153171 | MS.gene049403:CDS | 60.0% |
| ! | CTCCGGCATCGGAGTTTCAC+CGG | + | chr3.1:75152991-75153010 | None:intergenic | 60.0% |
| AACCCGGTCCAGACCCAACC+CGG | + | chr3.1:75153163-75153182 | None:intergenic | 65.0% | |
| CGGTGAAACTCCGATGCCGG+AGG | - | chr3.1:75152989-75153008 | MS.gene049403:CDS | 65.0% | |
| GAAGATGAGGCGGAGGACGG+TGG | - | chr3.1:75153038-75153057 | MS.gene049403:CDS | 65.0% | |
| GCGGAGGACGGTGGTGAAAG+AGG | - | chr3.1:75153047-75153066 | MS.gene049403:CDS | 65.0% | |
| GGGGAAGATGAGGCGGAGGA+CGG | - | chr3.1:75153035-75153054 | MS.gene049403:CDS | 65.0% | |
| GTTGGGTCTGGACCGGGTTC+AGG | - | chr3.1:75153164-75153183 | MS.gene049403:CDS | 65.0% | |
| GGCGACGGCGACGACTGTGA+CGG | - | chr3.1:75152734-75152753 | MS.gene049403:intron | 70.0% | |
| ! | AGCCGGGTTGGGTCTGGACC+GGG | - | chr3.1:75153158-75153177 | MS.gene049403:CDS | 70.0% |
| ! | GAGCCGGGTTGGGTCTGGAC+CGG | - | chr3.1:75153157-75153176 | MS.gene049403:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 75152570 | 75153472 | 75152570 | ID=MS.gene049403 |
| chr3.1 | mRNA | 75152570 | 75153472 | 75152570 | ID=MS.gene049403.t1;Parent=MS.gene049403 |
| chr3.1 | exon | 75152825 | 75153472 | 75152825 | ID=MS.gene049403.t1.exon1;Parent=MS.gene049403.t1 |
| chr3.1 | CDS | 75152825 | 75153472 | 75152825 | ID=cds.MS.gene049403.t1;Parent=MS.gene049403.t1 |
| chr3.1 | exon | 75152570 | 75152629 | 75152570 | ID=MS.gene049403.t1.exon2;Parent=MS.gene049403.t1 |
| chr3.1 | CDS | 75152570 | 75152629 | 75152570 | ID=cds.MS.gene049403.t1;Parent=MS.gene049403.t1 |
| Gene Sequence |
| Protein sequence |
