Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049749.t1 | XP_013455913.1 | 90.4 | 832 | 66 | 1 | 1 | 832 | 1 | 818 | 0.00E+00 | 1390.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049749.t1 | Q0MW30 | 43.6 | 55 | 30 | 1 | 776 | 829 | 490 | 544 | 6.2e-08 | 61.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049749.t1 | A0A072UJM7 | 90.4 | 832 | 66 | 1 | 1 | 832 | 1 | 818 | 0.0e+00 | 1390.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049749 | MS.gene057469 | 0.808784 | 2.61E-50 | -1.69E-46 |
| MS.gene049749 | MS.gene09404 | 0.934436 | 4.05E-96 | -1.69E-46 |
| MS.gene049749 | MS.gene38054 | 0.804741 | 1.87E-49 | -1.69E-46 |
| MS.gene049749 | MS.gene39027 | -0.811724 | 6.07E-51 | -1.69E-46 |
| MS.gene049749 | MS.gene39028 | -0.813836 | 2.09E-51 | -1.69E-46 |
| MS.gene049749 | MS.gene70237 | 0.801485 | 8.80E-49 | -1.69E-46 |
| MS.gene049749 | MS.gene91645 | 0.804932 | 1.70E-49 | -1.69E-46 |
| MS.gene049749 | MS.gene99735 | 0.80245 | 5.58E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049749.t1 | MTR_4g056600 | 93.269 | 832 | 42 | 1 | 1 | 832 | 1 | 818 | 0.0 | 1486 |
| MS.gene049749.t1 | MTR_2g084475 | 55.743 | 888 | 283 | 17 | 1 | 831 | 1 | 835 | 0.0 | 799 |
| MS.gene049749.t1 | MTR_2g084475 | 54.107 | 913 | 284 | 18 | 1 | 831 | 1 | 860 | 0.0 | 782 |
| MS.gene049749.t1 | MTR_1g090803 | 47.573 | 412 | 181 | 12 | 447 | 832 | 449 | 851 | 6.70e-94 | 313 |
| MS.gene049749.t1 | MTR_1g090803 | 48.424 | 349 | 167 | 7 | 1 | 344 | 110 | 450 | 1.15e-77 | 269 |
| MS.gene049749.t1 | MTR_2g437720 | 35.878 | 131 | 69 | 2 | 701 | 829 | 795 | 912 | 1.67e-16 | 84.7 |
| MS.gene049749.t1 | MTR_4g094795 | 31.008 | 129 | 72 | 2 | 704 | 830 | 702 | 815 | 8.30e-14 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049749.t1 | AT2G27950 | 43.444 | 877 | 413 | 21 | 1 | 832 | 1 | 839 | 0.0 | 565 |
| MS.gene049749.t1 | AT2G27950 | 43.444 | 877 | 413 | 21 | 1 | 832 | 1 | 839 | 0.0 | 565 |
| MS.gene049749.t1 | AT2G27950 | 43.444 | 877 | 413 | 21 | 1 | 832 | 1 | 839 | 0.0 | 565 |
| MS.gene049749.t1 | AT5G04460 | 51.701 | 294 | 121 | 8 | 557 | 832 | 573 | 863 | 7.78e-77 | 267 |
| MS.gene049749.t1 | AT5G04460 | 46.499 | 357 | 167 | 8 | 1 | 340 | 111 | 460 | 4.73e-64 | 231 |
| MS.gene049749.t1 | AT5G04460 | 51.701 | 294 | 121 | 8 | 557 | 832 | 573 | 863 | 7.78e-77 | 267 |
| MS.gene049749.t1 | AT5G04460 | 46.499 | 357 | 167 | 8 | 1 | 340 | 111 | 460 | 4.73e-64 | 231 |
| MS.gene049749.t1 | AT5G04460 | 51.701 | 294 | 121 | 8 | 557 | 832 | 573 | 863 | 7.78e-77 | 267 |
| MS.gene049749.t1 | AT5G04460 | 46.499 | 357 | 167 | 8 | 1 | 340 | 111 | 460 | 4.73e-64 | 231 |
| MS.gene049749.t1 | AT5G04460 | 51.701 | 294 | 121 | 8 | 557 | 832 | 573 | 863 | 7.78e-77 | 267 |
| MS.gene049749.t1 | AT5G04460 | 46.499 | 357 | 167 | 8 | 1 | 340 | 111 | 460 | 4.73e-64 | 231 |
| MS.gene049749.t1 | AT5G04460 | 46.499 | 357 | 167 | 8 | 1 | 340 | 111 | 460 | 9.56e-65 | 231 |
| MS.gene049749.t1 | AT5G04460 | 43.590 | 156 | 74 | 5 | 557 | 700 | 573 | 726 | 1.85e-18 | 90.9 |
| MS.gene049749.t1 | AT5G04460 | 46.499 | 357 | 167 | 8 | 1 | 340 | 111 | 460 | 3.23e-64 | 231 |
| MS.gene049749.t1 | AT5G04460 | 49.609 | 256 | 108 | 8 | 557 | 794 | 573 | 825 | 1.50e-54 | 203 |
| MS.gene049749.t1 | AT4G20160 | 39.286 | 168 | 78 | 6 | 662 | 829 | 1067 | 1210 | 1.07e-27 | 121 |
| MS.gene049749.t1 | AT4G20160 | 39.286 | 168 | 78 | 6 | 662 | 829 | 1065 | 1208 | 1.08e-27 | 121 |
| MS.gene049749.t1 | AT2G34920 | 30.000 | 230 | 112 | 5 | 610 | 829 | 471 | 661 | 3.09e-21 | 99.8 |
| MS.gene049749.t1 | AT2G34920 | 28.182 | 220 | 115 | 4 | 610 | 829 | 471 | 647 | 3.36e-17 | 86.7 |
| MS.gene049749.t1 | AT1G30860 | 30.070 | 143 | 67 | 2 | 686 | 828 | 615 | 724 | 2.88e-16 | 84.0 |
| MS.gene049749.t1 | AT4G20160 | 35.507 | 138 | 63 | 7 | 662 | 799 | 1065 | 1176 | 4.92e-12 | 70.5 |
Find 201 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAGGACTTTCACTTCTTC+TGG | 0.192105 | 4.2:-46853962 | None:intergenic |
| CACTAGATGACAATTCTAAA+TGG | 0.202577 | 4.2:+46859164 | MS.gene049749:CDS |
| CACCTCCTACTCCACCTCTT+TGG | 0.211199 | 4.2:+46858703 | MS.gene049749:CDS |
| CTACTAACATAAGAGATAAT+AGG | 0.236862 | 4.2:+46857652 | MS.gene049749:CDS |
| CCACGCCTCTCTCCTATATC+TGG | 0.245680 | 4.2:-46853748 | None:intergenic |
| CATCAGTTTGTAAGCTTTGT+TGG | 0.266875 | 4.2:-46857890 | None:intergenic |
| ACCTCCTACTCCACCTCTTT+GGG | 0.283684 | 4.2:+46858704 | MS.gene049749:CDS |
| AGGAAAGGGTGAGAGTTATA+AGG | 0.288014 | 4.2:+46854010 | MS.gene049749:CDS |
| AGGAGGGGAGATGGGAGAAA+TGG | 0.294607 | 4.2:+46853571 | MS.gene049749:CDS |
| TCCAAGAGGCCGTGGAAAAT+TGG | 0.303562 | 4.2:+46858273 | MS.gene049749:CDS |
| GAGCAGCCACGTGCTGAAAT+TGG | 0.317377 | 4.2:+46854087 | MS.gene049749:CDS |
| GGCAAGAAGCTTCTGAAGTT+TGG | 0.318234 | 4.2:+46858234 | MS.gene049749:CDS |
| CTATTATCTCTTATGTTAGT+AGG | 0.318995 | 4.2:-46857651 | None:intergenic |
| GATAATAGGGCTGGGGTATC+TGG | 0.324693 | 4.2:+46857666 | MS.gene049749:CDS |
| TCTCCTATATCTGGGCTATC+AGG | 0.329204 | 4.2:-46853739 | None:intergenic |
| GTACTTGAACGAAGGAATAA+TGG | 0.338393 | 4.2:+46853685 | MS.gene049749:CDS |
| GTGTTTCTTCTGGGGAAAAC+AGG | 0.339469 | 4.2:+46854064 | MS.gene049749:CDS |
| TTCAGGGAATGGATGAATAC+TGG | 0.344453 | 4.2:+46853928 | MS.gene049749:CDS |
| TCCCCATCGCAATCGCATTC+AGG | 0.349748 | 4.2:+46854296 | MS.gene049749:CDS |
| GCAGAAGGGGCTGCATCTTC+CGG | 0.353382 | 4.2:-46858597 | None:intergenic |
| GGCCATTTGTGCACATGTTC+AGG | 0.353626 | 4.2:+46859343 | MS.gene049749:CDS |
| GAATCTACTGCCCATGTAGA+AGG | 0.357868 | 4.2:+46857735 | MS.gene049749:CDS |
| ACAGATCTGTTGACCATAAC+AGG | 0.360955 | 4.2:+46854609 | MS.gene049749:CDS |
| CAGCAGAGAAGTGTTTCTTC+TGG | 0.363031 | 4.2:+46854054 | MS.gene049749:CDS |
| AACTCTCACCCTTTCCTGTT+CGG | 0.363975 | 4.2:-46854004 | None:intergenic |
| TGGTTTGGAAGATGCAGTTT+TGG | 0.368839 | 4.2:+46853768 | MS.gene049749:CDS |
| GACAAACTGTATCAGGTCTA+AGG | 0.376673 | 4.2:+46854675 | MS.gene049749:CDS |
| ATCAAATCAAGGTGATTATA+CGG | 0.378500 | 4.2:+46858001 | MS.gene049749:CDS |
| TCAAGATCAGATTGTTGATC+AGG | 0.387523 | 4.2:+46858638 | MS.gene049749:CDS |
| TACTAACATAAGAGATAATA+GGG | 0.390133 | 4.2:+46857653 | MS.gene049749:CDS |
| TATAGGAGAGAGGCGTGGTT+TGG | 0.390798 | 4.2:+46853753 | MS.gene049749:CDS |
| TTTAATACAAATGAACAAAC+TGG | 0.391228 | 4.2:+46857600 | MS.gene049749:CDS |
| GCGTCGAGAAGGAGGGGAGA+TGG | 0.391523 | 4.2:+46853562 | MS.gene049749:CDS |
| TACTACTTGGAGCAGTTTCA+TGG | 0.394166 | 4.2:-46858313 | None:intergenic |
| GCTGGTTGCTTGGCTGCAAC+CGG | 0.397760 | 4.2:-46857541 | None:intergenic |
| AGGCAAAGACAAACTGTATC+AGG | 0.398204 | 4.2:+46854668 | MS.gene049749:CDS |
| AGCATCCTCATGGTGATAAC+TGG | 0.404311 | 4.2:+46858730 | MS.gene049749:CDS |
| TTTGAGGGATTCACAGTCTC+AGG | 0.405021 | 4.2:+46853540 | MS.gene049749:CDS |
| ATCCTGAACATGTGCACAAA+TGG | 0.406979 | 4.2:-46859345 | None:intergenic |
| AATCGCTCAGCTGGTTCATC+AGG | 0.410026 | 4.2:+46859036 | MS.gene049749:CDS |
| ATGAGTTGCTTCAAAGTAGA+AGG | 0.410878 | 4.2:+46859374 | MS.gene049749:CDS |
| GCAACCGGTACTGTCCATTC+TGG | 0.416909 | 4.2:-46857526 | None:intergenic |
| TCACGAGTTGCTGGACCATC+AGG | 0.422823 | 4.2:+46854260 | MS.gene049749:CDS |
| TTCAGAGCATAGTAATAATC+AGG | 0.425192 | 4.2:+46857914 | MS.gene049749:CDS |
| CTACAGATGTGGACCTGTTA+TGG | 0.426239 | 4.2:-46854622 | None:intergenic |
| TCTGGTGACCACTGTCTAGA+AGG | 0.426412 | 4.2:+46857684 | MS.gene049749:CDS |
| CAGATAGGTTGCTGGTTGCT+TGG | 0.427588 | 4.2:-46857551 | None:intergenic |
| GGAAAGGGTGAGAGTTATAA+GGG | 0.430274 | 4.2:+46854011 | MS.gene049749:CDS |
| AGGGACAAAATGAGTATATA+CGG | 0.433117 | 4.2:+46854157 | MS.gene049749:CDS |
| TGTTTGCAGGCATTGCTTAG+AGG | 0.436393 | 4.2:+46854569 | MS.gene049749:intron |
| AATATTGAAATGGCGATTGC+TGG | 0.436857 | 4.2:+46853484 | None:intergenic |
| TGCAGGCATTGCTTAGAGGC+AGG | 0.437562 | 4.2:+46854573 | MS.gene049749:intron |
| TTGTATACATTGTCATCATC+AGG | 0.440785 | 4.2:-46858356 | None:intergenic |
| CAACATATGATTGTATCAAC+TGG | 0.442570 | 4.2:-46858542 | None:intergenic |
| CGTCGAGAAGGAGGGGAGAT+GGG | 0.443422 | 4.2:+46853563 | MS.gene049749:CDS |
| GCACCTGATAGCCCAGATAT+AGG | 0.445845 | 4.2:+46853736 | MS.gene049749:CDS |
| GCGTAAATTACGCGGCAGAC+AGG | 0.448710 | 4.2:+46854188 | MS.gene049749:CDS |
| TGCTAACATGGAGTGGGATC+CGG | 0.449305 | 4.2:+46858578 | MS.gene049749:CDS |
| GAGAGAAATTCACGAGTTGC+TGG | 0.450529 | 4.2:+46854251 | MS.gene049749:CDS |
| TACTTGAACGAAGGAATAAT+GGG | 0.451175 | 4.2:+46853686 | MS.gene049749:CDS |
| CCAGAAGAAGTGAAAGTCCT+AGG | 0.455731 | 4.2:+46853962 | MS.gene049749:CDS |
| GGGTGAGAGTTATAAGGGAA+TGG | 0.463412 | 4.2:+46854016 | MS.gene049749:CDS |
| TCTACTTTGAAGCAACTCAT+TGG | 0.464087 | 4.2:-46859371 | None:intergenic |
| GAGGATGCTTGAGGCATGTA+TGG | 0.465292 | 4.2:+46858960 | MS.gene049749:CDS |
| TCTGTAGCAGAAAGTGAATT+AGG | 0.468211 | 4.2:+46854638 | MS.gene049749:CDS |
| AGCAGAGAAGTGTTTCTTCT+GGG | 0.468948 | 4.2:+46854055 | MS.gene049749:CDS |
| ACTAGATGACAATTCTAAAT+GGG | 0.469701 | 4.2:+46859165 | MS.gene049749:CDS |
| TGGAGAAAGCAGTTCTTGTA+TGG | 0.473122 | 4.2:+46857620 | MS.gene049749:CDS |
| AACATAAGAGATAATAGGGC+TGG | 0.474807 | 4.2:+46857657 | MS.gene049749:CDS |
| TCTCCAAGCCATTCTCCCCT+AGG | 0.480711 | 4.2:-46853979 | None:intergenic |
| GTTGATGATGTGAATGGATC+TGG | 0.481816 | 4.2:+46858035 | MS.gene049749:CDS |
| ATATTGATTCTTTATTGTAC+AGG | 0.482450 | 4.2:+46859230 | MS.gene049749:CDS |
| CAGAAGCTTCTTGCCGATGA+GGG | 0.484301 | 4.2:-46858226 | None:intergenic |
| ACATAATGAGCAATCTGAGC+TGG | 0.491558 | 4.2:+46857950 | MS.gene049749:CDS |
| AAATGGGAATGTGTGAGAAA+AGG | 0.491566 | 4.2:+46859181 | MS.gene049749:CDS |
| ACATAAGAGATAATAGGGCT+GGG | 0.492697 | 4.2:+46857658 | MS.gene049749:CDS |
| TATGCTTGATATGCTTAAGA+AGG | 0.494043 | 4.2:+46854212 | MS.gene049749:CDS |
| ACACAGGGGCATGACACATT+GGG | 0.495087 | 4.2:-46859402 | None:intergenic |
| TGAGGTATCAGATAGGTTGC+TGG | 0.495149 | 4.2:-46857559 | None:intergenic |
| CAGAAGAAACACTTCTCTGC+TGG | 0.495392 | 4.2:-46854053 | None:intergenic |
| GAAGTTTGGCAAGAAGATAG+TGG | 0.496390 | 4.2:+46858248 | MS.gene049749:CDS |
| ATGGCTTGGAGAAACCGAAC+AGG | 0.497566 | 4.2:+46853990 | MS.gene049749:CDS |
| GGTGAGAGTTATAAGGGAAT+GGG | 0.498358 | 4.2:+46854017 | MS.gene049749:CDS |
| GTGAAAGTCCTAGGGGAGAA+TGG | 0.499498 | 4.2:+46853971 | MS.gene049749:CDS |
| TGGTGCTCTAGAAGAACAGC+TGG | 0.499590 | 4.2:+46858055 | MS.gene049749:CDS |
| AACCTGAATGCGATTGCGAT+GGG | 0.500742 | 4.2:-46854298 | None:intergenic |
| GTGTCATGCCCCTGTGTTGG+AGG | 0.503473 | 4.2:+46859408 | MS.gene049749:CDS |
| GCAACTGATTCCCTTCTACA+TGG | 0.505549 | 4.2:-46857746 | None:intergenic |
| ATTATCATCCACACTTTCAT+CGG | 0.507455 | 4.2:-46858141 | None:intergenic |
| CTGCTCAAGGTTAGCAGAAG+GGG | 0.510161 | 4.2:-46858610 | None:intergenic |
| GGCATCAGAGTAACACTGAA+TGG | 0.512613 | 4.2:+46858108 | MS.gene049749:CDS |
| TTGCTCATTATGTACCTCAC+TGG | 0.519396 | 4.2:-46857940 | None:intergenic |
| TGCAAATTGAGTCAGTAGAT+AGG | 0.521323 | 4.2:+46857775 | MS.gene049749:CDS |
| GTACGTATAACCTCCAACAC+AGG | 0.522112 | 4.2:-46859418 | None:intergenic |
| GCAGCACTAAATCGCTCAGC+TGG | 0.523696 | 4.2:+46859027 | MS.gene049749:CDS |
| AACACAGGGGCATGACACAT+TGG | 0.524870 | 4.2:-46859403 | None:intergenic |
| GCAAATGTGGCGGGATATTG+AGG | 0.524908 | 4.2:+46853618 | MS.gene049749:CDS |
| ATGAGTGGCCTGAAAACAGT+TGG | 0.525968 | 4.2:+46858183 | MS.gene049749:CDS |
| GAAAACAATTCATCAAATCA+AGG | 0.526616 | 4.2:+46857990 | MS.gene049749:CDS |
| AGAGGTGGAGTAGGAGGTGA+AGG | 0.526630 | 4.2:-46858699 | None:intergenic |
| CAGAAGAAGTGAAAGTCCTA+GGG | 0.526943 | 4.2:+46853963 | MS.gene049749:CDS |
| GAGGCCGTGGAAAATTGGTT+AGG | 0.527945 | 4.2:+46858278 | MS.gene049749:CDS |
| AATGTGTCATGCCCCTGTGT+TGG | 0.528835 | 4.2:+46859405 | MS.gene049749:CDS |
| TTCACTTTCTGCTACAGATG+TGG | 0.530455 | 4.2:-46854633 | None:intergenic |
| GAACGAATTGTTGAAAATGA+AGG | 0.531145 | 4.2:+46858077 | MS.gene049749:CDS |
| TTAAGAAGGCTGAGAGGGAA+AGG | 0.531448 | 4.2:+46854226 | MS.gene049749:CDS |
| ATGTATACAATGTTGAACTC+AGG | 0.531948 | 4.2:+46858369 | MS.gene049749:CDS |
| TAACTATGAACTCTACTACT+TGG | 0.532761 | 4.2:-46858326 | None:intergenic |
| TCTCAGGCGTCGAGAAGGAG+GGG | 0.536916 | 4.2:+46853556 | MS.gene049749:CDS |
| AGTCCTAGGGGAGAATGGCT+TGG | 0.540524 | 4.2:+46853976 | MS.gene049749:CDS |
| CTTTGGGATCAGCATCCTCA+TGG | 0.541128 | 4.2:+46858720 | MS.gene049749:CDS |
| GTCTCAGGCGTCGAGAAGGA+GGG | 0.543683 | 4.2:+46853555 | MS.gene049749:CDS |
| TGGAGAAACCGAACAGGAAA+GGG | 0.545519 | 4.2:+46853996 | MS.gene049749:CDS |
| TAGTGGCTTCCAAGAGGCCG+TGG | 0.546285 | 4.2:+46858265 | MS.gene049749:CDS |
| GGAAGGATTCTTCTCCAGAA+TGG | 0.547490 | 4.2:+46857512 | MS.gene049749:CDS |
| CACGCCTCTCTCCTATATCT+GGG | 0.548483 | 4.2:-46853747 | None:intergenic |
| TTCTCCAGAATGGACAGTAC+CGG | 0.554594 | 4.2:+46857522 | MS.gene049749:CDS |
| GGCAGTCATCATTCAGTGAT+GGG | 0.556282 | 4.2:+46857796 | MS.gene049749:CDS |
| AAACCTGAATGCGATTGCGA+TGG | 0.557623 | 4.2:-46854299 | None:intergenic |
| AGGCAGTCATCATTCAGTGA+TGG | 0.562606 | 4.2:+46857795 | MS.gene049749:CDS |
| TGCTGCTCAAGGTTAGCAGA+AGG | 0.562718 | 4.2:-46858612 | None:intergenic |
| TTGGAGAAACCGAACAGGAA+AGG | 0.563762 | 4.2:+46853995 | MS.gene049749:CDS |
| CACAGTCTCAGGCGTCGAGA+AGG | 0.564701 | 4.2:+46853551 | MS.gene049749:CDS |
| AGTCATGTTCAAGGAAGAGC+GGG | 0.564851 | 4.2:+46853655 | MS.gene049749:CDS |
| CATAATGAGCAATCTGAGCT+GGG | 0.565927 | 4.2:+46857951 | MS.gene049749:CDS |
| TCAGAAGCTTCTTGCCGATG+AGG | 0.566572 | 4.2:-46858227 | None:intergenic |
| GTAGGAGGTGAAGGCAAAGA+GGG | 0.566610 | 4.2:-46858690 | None:intergenic |
| CATGCGGTGAGTCATGTTCA+AGG | 0.567237 | 4.2:+46853646 | MS.gene049749:CDS |
| TGTTTGATGAGGTATCAGAT+AGG | 0.568109 | 4.2:-46857566 | None:intergenic |
| TACGTATAACCTCCAACACA+GGG | 0.568125 | 4.2:-46859417 | None:intergenic |
| AGTCTCAGGCGTCGAGAAGG+AGG | 0.570485 | 4.2:+46853554 | MS.gene049749:CDS |
| AATGTTGTTGATGATGTGAA+TGG | 0.570524 | 4.2:+46858029 | MS.gene049749:CDS |
| GATCTTGACTCTGCTGCTCA+AGG | 0.570783 | 4.2:-46858623 | None:intergenic |
| AAGACAAGGTCATGCTAACA+TGG | 0.573015 | 4.2:+46858566 | MS.gene049749:CDS |
| TGAGTGGCCTGAAAACAGTT+GGG | 0.573179 | 4.2:+46858184 | MS.gene049749:CDS |
| GTGAGAGTGAGTCGGATACA+TGG | 0.573797 | 4.2:+46853791 | MS.gene049749:CDS |
| TCCCAAAGAGGTGGAGTAGG+AGG | 0.575347 | 4.2:-46858705 | None:intergenic |
| AAAGTGAATTAGGCTTATTG+AGG | 0.577540 | 4.2:+46854648 | MS.gene049749:CDS |
| TGTTTCTTCTGGGGAAAACA+GGG | 0.577546 | 4.2:+46854065 | MS.gene049749:CDS |
| TGTATACAATGTTGAACTCA+GGG | 0.579146 | 4.2:+46858370 | MS.gene049749:CDS |
| AATCTACTGCCCATGTAGAA+GGG | 0.580314 | 4.2:+46857736 | MS.gene049749:CDS |
| AACTCAGGGAACTTCATAGT+AGG | 0.580482 | 4.2:+46858384 | MS.gene049749:CDS |
| GCCGTGGAAAATTGGTTAGG+AGG | 0.582438 | 4.2:+46858281 | MS.gene049749:CDS |
| ATCGATATCAATGTTTGATG+AGG | 0.583936 | 4.2:-46857577 | None:intergenic |
| GGAGCAGTTTCATGGTCAGA+AGG | 0.584695 | 4.2:-46858305 | None:intergenic |
| GCTGCTCAAGGTTAGCAGAA+GGG | 0.585322 | 4.2:-46858611 | None:intergenic |
| GGCAAAGAGGGCAAGTCAAG+TGG | 0.585826 | 4.2:-46858678 | None:intergenic |
| CAAATTGAACGTGTGCGTGA+TGG | 0.589798 | 4.2:+46854114 | MS.gene049749:CDS |
| TTGAAAATGAAGGAAGTGGC+TGG | 0.593253 | 4.2:+46858087 | MS.gene049749:CDS |
| AGATCAGATTGTTGATCAGG+AGG | 0.593384 | 4.2:+46858641 | MS.gene049749:CDS |
| TGATCCCAAAGAGGTGGAGT+AGG | 0.595989 | 4.2:-46858708 | None:intergenic |
| CATAAGAGATAATAGGGCTG+GGG | 0.598060 | 4.2:+46857659 | MS.gene049749:CDS |
| TATGCTTAAGAAGGCTGAGA+GGG | 0.600029 | 4.2:+46854221 | MS.gene049749:CDS |
| TAATGACTTGAGACTTGACA+TGG | 0.602099 | 4.2:+46858906 | MS.gene049749:CDS |
| AAGGTCATGCTAACATGGAG+TGG | 0.602708 | 4.2:+46858571 | MS.gene049749:CDS |
| AGACGTGTGTCTAATCTCCT+CGG | 0.602774 | 4.2:+46858495 | MS.gene049749:CDS |
| GATCAGATTGTTGATCAGGA+GGG | 0.602786 | 4.2:+46858642 | MS.gene049749:CDS |
| CAACTGATTCCCTTCTACAT+GGG | 0.607164 | 4.2:-46857745 | None:intergenic |
| CAATCATATGTTGAAAGACA+AGG | 0.607748 | 4.2:+46858552 | MS.gene049749:CDS |
| AGGTCATGCTAACATGGAGT+GGG | 0.609154 | 4.2:+46858572 | MS.gene049749:CDS |
| AGTAGGAGGTGAAGGCAAAG+AGG | 0.610022 | 4.2:-46858691 | None:intergenic |
| ATTGTTGAAAATGAAGGAAG+TGG | 0.611160 | 4.2:+46858083 | MS.gene049749:CDS |
| GCAGAGAAGTGTTTCTTCTG+GGG | 0.614516 | 4.2:+46854056 | MS.gene049749:CDS |
| GTGAAGCAGTACTTGAACGA+AGG | 0.618658 | 4.2:+46853677 | MS.gene049749:CDS |
| ACATGGCTAGATTACAGCAA+AGG | 0.619715 | 4.2:+46858923 | MS.gene049749:CDS |
| TGAATCTCATGATGGTCATG+AGG | 0.623629 | 4.2:+46853834 | MS.gene049749:CDS |
| GAGCTGGGTGATATAAGTAA+TGG | 0.624327 | 4.2:+46857966 | MS.gene049749:CDS |
| AAATAGCACCGATGAAAGTG+TGG | 0.625113 | 4.2:+46858133 | MS.gene049749:CDS |
| AGTCAGAATGAATCTCATGA+TGG | 0.625222 | 4.2:+46853826 | MS.gene049749:CDS |
| TGAAAACAGTTGGGTCAATG+AGG | 0.628260 | 4.2:+46858193 | MS.gene049749:CDS |
| AGGATGTAGAAAACCCTCAT+CGG | 0.631792 | 4.2:+46858213 | MS.gene049749:CDS |
| TGTGTACCAATTTCAGCACG+TGG | 0.632437 | 4.2:-46854093 | None:intergenic |
| GGATGCTGATCCCAAAGAGG+TGG | 0.632575 | 4.2:-46858714 | None:intergenic |
| TGTGAAAGAAGAGATTGCAC+TGG | 0.632608 | 4.2:+46857819 | MS.gene049749:CDS |
| GTGAAAGAAGAGATTGCACT+GGG | 0.636464 | 4.2:+46857820 | MS.gene049749:CDS |
| ACCTGAATGCGATTGCGATG+GGG | 0.639757 | 4.2:-46854297 | None:intergenic |
| ATGGGAGAAATGGAAGTACT+CGG | 0.642115 | 4.2:+46853581 | MS.gene049749:CDS |
| CACTGGGCAAAATGTTGATG+TGG | 0.643337 | 4.2:+46857836 | MS.gene049749:CDS |
| ATATGCTTAAGAAGGCTGAG+AGG | 0.643545 | 4.2:+46854220 | MS.gene049749:CDS |
| TTTGTCGTTAACCACAGTGA+GGG | 0.653914 | 4.2:+46854138 | MS.gene049749:CDS |
| TCAGAAATACAGCAAATGAG+TGG | 0.656504 | 4.2:+46858168 | MS.gene049749:CDS |
| GAGTCATGTTCAAGGAAGAG+CGG | 0.660261 | 4.2:+46853654 | MS.gene049749:CDS |
| AAAGGATGAATACTATGCAG+AGG | 0.664403 | 4.2:+46858941 | MS.gene049749:CDS |
| TACTATGCAGAGGATGCTTG+AGG | 0.669401 | 4.2:+46858951 | MS.gene049749:CDS |
| GGATATTGAGGATGAACATG+CGG | 0.669856 | 4.2:+46853630 | MS.gene049749:CDS |
| TCGCACGGAAACTACTTCCG+AGG | 0.672959 | 4.2:-46858512 | None:intergenic |
| AGAAGATAGTGGCTTCCAAG+AGG | 0.678702 | 4.2:+46858259 | MS.gene049749:CDS |
| TCAACTGGTCAAGACTCGCA+CGG | 0.680463 | 4.2:-46858527 | None:intergenic |
| TGAGGATGCTGATCCCAAAG+AGG | 0.681681 | 4.2:-46858717 | None:intergenic |
| ATAGCCCAGATATAGGAGAG+AGG | 0.687767 | 4.2:+46853743 | MS.gene049749:CDS |
| GAAAACGTGATACAGCCTGA+TGG | 0.688400 | 4.2:-46854275 | None:intergenic |
| ATGTAATTCCTTCTAGACAG+TGG | 0.688413 | 4.2:-46857692 | None:intergenic |
| AGAAGAAGTGAAAGTCCTAG+GGG | 0.691562 | 4.2:+46853964 | MS.gene049749:CDS |
| AAGTTGAAAGGGAAAGAGTG+CGG | 0.701088 | 4.2:+46853899 | MS.gene049749:CDS |
| GACAAAATGAGTATATACGG+AGG | 0.701738 | 4.2:+46854160 | MS.gene049749:CDS |
| TAATAATCAGGTATCCAGTG+AGG | 0.702522 | 4.2:+46857926 | MS.gene049749:CDS |
| TGCGACCAGTTATCACCATG+AGG | 0.712073 | 4.2:-46858735 | None:intergenic |
| ATTTGTCGTTAACCACAGTG+AGG | 0.724751 | 4.2:+46854137 | MS.gene049749:CDS |
| CCAGATATAGGAGAGAGGCG+TGG | 0.726312 | 4.2:+46853748 | MS.gene049749:CDS |
| AGGAGTATGCGTAAATTACG+CGG | 0.727888 | 4.2:+46854180 | MS.gene049749:CDS |
| ACGTATAACCTCCAACACAG+GGG | 0.774720 | 4.2:-46859416 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTAAACTATATTTTAC+TGG | - | chr4.2:46854493-46854512 | None:intergenic | 10.0% |
| !!! | ATCTTTAATTTTAAAATGAT+AGG | - | chr4.2:46858439-46858458 | None:intergenic | 10.0% |
| !!! | GTTTATTTTAGAAAAAAATT+AGG | - | chr4.2:46855393-46855412 | None:intergenic | 10.0% |
| !!! | TATCATTTTAAAATTAAAGA+TGG | + | chr4.2:46858438-46858457 | MS.gene049749:intron | 10.0% |
| !! | AAAAAGTTTCATAAACAATA+AGG | - | chr4.2:46854794-46854813 | None:intergenic | 15.0% |
| !! | AAAAGTTTCATAAACAATAA+GGG | - | chr4.2:46854793-46854812 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAACTTGTTGA+GGG | + | chr4.2:46855998-46856017 | MS.gene049749:intron | 15.0% |
| !! | AAAGTTTCATAAACAATAAG+GGG | - | chr4.2:46854792-46854811 | None:intergenic | 20.0% |
| !! | AATAGAAACTAATCACTTAT+TGG | - | chr4.2:46854327-46854346 | None:intergenic | 20.0% |
| !! | ATCAAACAAAAGAATCTATT+CGG | - | chr4.2:46854985-46855004 | None:intergenic | 20.0% |
| !! | TACTAACATAAGAGATAATA+GGG | + | chr4.2:46857653-46857672 | MS.gene049749:CDS | 20.0% |
| !! | TTTAATACAAATGAACAAAC+TGG | + | chr4.2:46857600-46857619 | MS.gene049749:CDS | 20.0% |
| !!! | AACTATGTGTTATTTTTCTT+TGG | + | chr4.2:46858785-46858804 | MS.gene049749:intron | 20.0% |
| !!! | ATATTGATTCTTTATTGTAC+AGG | + | chr4.2:46859230-46859249 | MS.gene049749:CDS | 20.0% |
| !!! | GTTTTTTTTTAAACTTGTTG+AGG | + | chr4.2:46855997-46856016 | MS.gene049749:intron | 20.0% |
| !!! | TAAAAGTTAGGCTTTAAAAT+GGG | + | chr4.2:46857026-46857045 | MS.gene049749:intron | 20.0% |
| !!! | TGTGAAAAGTGATTTTTATT+TGG | + | chr4.2:46858836-46858855 | MS.gene049749:intron | 20.0% |
| !!! | TTAAAAGTTAGGCTTTAAAA+TGG | + | chr4.2:46857025-46857044 | MS.gene049749:intron | 20.0% |
| ! | AAACTTCATCATAATCAACT+TGG | - | chr4.2:46856518-46856537 | None:intergenic | 25.0% |
| ! | AAATAACACATAGTTACTAG+AGG | - | chr4.2:46858780-46858799 | None:intergenic | 25.0% |
| ! | ACTAGATGACAATTCTAAAT+GGG | + | chr4.2:46859165-46859184 | MS.gene049749:CDS | 25.0% |
| ! | ATAAACAGAACCATTTATTC+TGG | - | chr4.2:46858467-46858486 | None:intergenic | 25.0% |
| ! | ATAAATAAAACAACATGGCT+TGG | - | chr4.2:46855651-46855670 | None:intergenic | 25.0% |
| ! | ATCAAATCAAGGTGATTATA+CGG | + | chr4.2:46858001-46858020 | MS.gene049749:CDS | 25.0% |
| ! | ATCAAATTGAGTACAAAACT+CGG | - | chr4.2:46854534-46854553 | None:intergenic | 25.0% |
| ! | ATCCAGCTGAAAAATAAAAA+AGG | + | chr4.2:46857163-46857182 | MS.gene049749:intron | 25.0% |
| ! | ATGATCGTGTATAAAAAATG+AGG | - | chr4.2:46855681-46855700 | None:intergenic | 25.0% |
| ! | CACAAAACAAGTATACAAAA+TGG | - | chr4.2:46857463-46857482 | None:intergenic | 25.0% |
| ! | CTACTAACATAAGAGATAAT+AGG | + | chr4.2:46857652-46857671 | MS.gene049749:CDS | 25.0% |
| ! | CTATTATCTCTTATGTTAGT+AGG | - | chr4.2:46857654-46857673 | None:intergenic | 25.0% |
| ! | GAAAACAATTCATCAAATCA+AGG | + | chr4.2:46857990-46858009 | MS.gene049749:CDS | 25.0% |
| ! | GAACATTCTAAGTAGAATTT+AGG | + | chr4.2:46855751-46855770 | MS.gene049749:intron | 25.0% |
| ! | TCACGATAAATAAAACAACA+TGG | - | chr4.2:46855656-46855675 | None:intergenic | 25.0% |
| ! | TCTCTTGAAAAGATAAAATG+CGG | - | chr4.2:46859090-46859109 | None:intergenic | 25.0% |
| ! | TCTCTTTACTTTCATGATAT+TGG | - | chr4.2:46856795-46856814 | None:intergenic | 25.0% |
| ! | TTAGTATTTATGTATGCTGT+TGG | + | chr4.2:46856571-46856590 | MS.gene049749:intron | 25.0% |
| !! | TAAACTATATTTTACTGGAG+TGG | - | chr4.2:46854488-46854507 | None:intergenic | 25.0% |
| !! | TATACCGCTATAACATTTTT+GGG | + | chr4.2:46856656-46856675 | MS.gene049749:intron | 25.0% |
| !! | TTTTATACTGAATGTCAAGA+TGG | + | chr4.2:46854425-46854444 | MS.gene049749:intron | 25.0% |
| !!! | AACTTTTTTGGAAAATAGGT+TGG | - | chr4.2:46856955-46856974 | None:intergenic | 25.0% |
| !!! | ACATTTAGAGCTTATTTTGA+TGG | + | chr4.2:46856485-46856504 | MS.gene049749:intron | 25.0% |
| !!! | ACTGAACTTTTTTGGAAAAT+AGG | - | chr4.2:46856959-46856978 | None:intergenic | 25.0% |
| !!! | AGTTTTGTACGATAGAAATA+AGG | + | chr4.2:46856736-46856755 | MS.gene049749:intron | 25.0% |
| !!! | ATTTTTTAACTGAACTCCTA+TGG | + | chr4.2:46855021-46855040 | MS.gene049749:intron | 25.0% |
| !!! | CATTTAGAGCTTATTTTGAT+GGG | + | chr4.2:46856486-46856505 | MS.gene049749:intron | 25.0% |
| !!! | CTCTTTTTGTTTCATAAAAC+AGG | - | chr4.2:46855470-46855489 | None:intergenic | 25.0% |
| !!! | CTTTTAGAACTTGATTTTGA+TGG | + | chr4.2:46856408-46856427 | MS.gene049749:intron | 25.0% |
| !!! | TATGTGTTATTTTTCTTTGG+TGG | + | chr4.2:46858788-46858807 | MS.gene049749:intron | 25.0% |
| !!! | TTCCTTTTTTATTTTTCAGC+TGG | - | chr4.2:46857168-46857187 | None:intergenic | 25.0% |
| AAACAAAGAGCTAATGTCAT+TGG | - | chr4.2:46857486-46857505 | None:intergenic | 30.0% | |
| AAAGTGAATTAGGCTTATTG+AGG | + | chr4.2:46854648-46854667 | MS.gene049749:CDS | 30.0% | |
| AACAAGTATACAAAATGGAG+TGG | - | chr4.2:46857458-46857477 | None:intergenic | 30.0% | |
| AAGATGGTATCCAGAATAAA+TGG | + | chr4.2:46858454-46858473 | MS.gene049749:intron | 30.0% | |
| AATCTATTCGGTTAAGTTAG+GGG | - | chr4.2:46854973-46854992 | None:intergenic | 30.0% | |
| ACAGAAAAACACACAAGTAA+AGG | - | chr4.2:46856548-46856567 | None:intergenic | 30.0% | |
| AGAATCTATTCGGTTAAGTT+AGG | - | chr4.2:46854975-46854994 | None:intergenic | 30.0% | |
| AGACTAAAATCCATGTACAA+AGG | - | chr4.2:46856608-46856627 | None:intergenic | 30.0% | |
| AGGAACTGATGTTAAAAGTT+AGG | + | chr4.2:46857014-46857033 | MS.gene049749:intron | 30.0% | |
| AGGGACAAAATGAGTATATA+CGG | + | chr4.2:46854157-46854176 | MS.gene049749:CDS | 30.0% | |
| AGTCGGTGATTATAATAATC+CGG | - | chr4.2:46859298-46859317 | None:intergenic | 30.0% | |
| ATCGATATCAATGTTTGATG+AGG | - | chr4.2:46857580-46857599 | None:intergenic | 30.0% | |
| ATGTATACAATGTTGAACTC+AGG | + | chr4.2:46858369-46858388 | MS.gene049749:CDS | 30.0% | |
| ATTATCATCCACACTTTCAT+CGG | - | chr4.2:46858144-46858163 | None:intergenic | 30.0% | |
| ATTGTTGAAAATGAAGGAAG+TGG | + | chr4.2:46858083-46858102 | MS.gene049749:CDS | 30.0% | |
| ATTTATGTTCCCTTTGTACA+TGG | + | chr4.2:46856595-46856614 | MS.gene049749:intron | 30.0% | |
| CAACATATGATTGTATCAAC+TGG | - | chr4.2:46858545-46858564 | None:intergenic | 30.0% | |
| CAATCATATGTTGAAAGACA+AGG | + | chr4.2:46858552-46858571 | MS.gene049749:CDS | 30.0% | |
| CACTAGATGACAATTCTAAA+TGG | + | chr4.2:46859164-46859183 | MS.gene049749:CDS | 30.0% | |
| CAGAAAAACACACAAGTAAA+GGG | - | chr4.2:46856547-46856566 | None:intergenic | 30.0% | |
| GAACGAATTGTTGAAAATGA+AGG | + | chr4.2:46858077-46858096 | MS.gene049749:CDS | 30.0% | |
| GAATCTATTCGGTTAAGTTA+GGG | - | chr4.2:46854974-46854993 | None:intergenic | 30.0% | |
| GACGAATGTGGATAAAAATT+GGG | - | chr4.2:46855625-46855644 | None:intergenic | 30.0% | |
| GACTAAAATCCATGTACAAA+GGG | - | chr4.2:46856607-46856626 | None:intergenic | 30.0% | |
| GAGTTCATACTTAGCAAATT+GGG | + | chr4.2:46855182-46855201 | MS.gene049749:intron | 30.0% | |
| TAACTATGAACTCTACTACT+TGG | - | chr4.2:46858329-46858348 | None:intergenic | 30.0% | |
| TACTTGAACGAAGGAATAAT+GGG | + | chr4.2:46853686-46853705 | MS.gene049749:CDS | 30.0% | |
| TATGCTTGATATGCTTAAGA+AGG | + | chr4.2:46854212-46854231 | MS.gene049749:CDS | 30.0% | |
| TCAAATTGAGTACAAAACTC+GGG | - | chr4.2:46854533-46854552 | None:intergenic | 30.0% | |
| TGAGTTCATACTTAGCAAAT+TGG | + | chr4.2:46855181-46855200 | MS.gene049749:intron | 30.0% | |
| TGGCTACAATTGTTTGATTA+GGG | - | chr4.2:46855525-46855544 | None:intergenic | 30.0% | |
| TGTATACAATGTTGAACTCA+GGG | + | chr4.2:46858370-46858389 | MS.gene049749:CDS | 30.0% | |
| TTCAGAGCATAGTAATAATC+AGG | + | chr4.2:46857914-46857933 | MS.gene049749:CDS | 30.0% | |
| TTCCTGGGATAAATTTAACT+CGG | - | chr4.2:46859129-46859148 | None:intergenic | 30.0% | |
| TTGGCTACAATTGTTTGATT+AGG | - | chr4.2:46855526-46855545 | None:intergenic | 30.0% | |
| TTGTATACATTGTCATCATC+AGG | - | chr4.2:46858359-46858378 | None:intergenic | 30.0% | |
| TTTCATAAACAATAAGGGGA+CGG | - | chr4.2:46854788-46854807 | None:intergenic | 30.0% | |
| ! | ATACCGCTATAACATTTTTG+GGG | + | chr4.2:46856657-46856676 | MS.gene049749:intron | 30.0% |
| ! | ATATTTGTTTGCTGACATAG+TGG | + | chr4.2:46855128-46855147 | MS.gene049749:intron | 30.0% |
| ! | ATGACTGCTATTGCAATTTT+GGG | + | chr4.2:46855944-46855963 | MS.gene049749:intron | 30.0% |
| ! | ATTAGCTCTTTGTTTGAACA+GGG | + | chr4.2:46857491-46857510 | MS.gene049749:intron | 30.0% |
| ! | CTATACCGCTATAACATTTT+TGG | + | chr4.2:46856655-46856674 | MS.gene049749:intron | 30.0% |
| ! | GATTTTCCTATTTCCTCTTT+TGG | - | chr4.2:46855545-46855564 | None:intergenic | 30.0% |
| ! | TAAACACGGGTTACAATATT+AGG | - | chr4.2:46856054-46856073 | None:intergenic | 30.0% |
| ! | TAACTTTTAACATCAGTTCC+TGG | - | chr4.2:46857015-46857034 | None:intergenic | 30.0% |
| ! | TGTGAAAACTCTTCTGTTTT+CGG | + | chr4.2:46853874-46853893 | MS.gene049749:CDS | 30.0% |
| ! | TTGCTTATGTCTTTTTCTGA+CGG | + | chr4.2:46856364-46856383 | MS.gene049749:intron | 30.0% |
| ! | TTTTAACATATACTGCATGC+TGG | - | chr4.2:46855315-46855334 | None:intergenic | 30.0% |
| !! | AATGTTGTTGATGATGTGAA+TGG | + | chr4.2:46858029-46858048 | MS.gene049749:CDS | 30.0% |
| !! | GATTTTAGTCTTCACAATAG+AGG | + | chr4.2:46856617-46856636 | MS.gene049749:intron | 30.0% |
| !! | TGTTTTATGCTGTTTGACTT+GGG | + | chr4.2:46857204-46857223 | MS.gene049749:intron | 30.0% |
| !! | TTGTTTTATGCTGTTTGACT+TGG | + | chr4.2:46857203-46857222 | MS.gene049749:intron | 30.0% |
| AAAGCAGCCACAATTAAACA+CGG | - | chr4.2:46856068-46856087 | None:intergenic | 35.0% | |
| AAAGGATGAATACTATGCAG+AGG | + | chr4.2:46858941-46858960 | MS.gene049749:CDS | 35.0% | |
| AAATGGGAATGTGTGAGAAA+AGG | + | chr4.2:46859181-46859200 | MS.gene049749:CDS | 35.0% | |
| AACACTTACCTTTCTGAGTT+TGG | - | chr4.2:46855708-46855727 | None:intergenic | 35.0% | |
| AACATAAGAGATAATAGGGC+TGG | + | chr4.2:46857657-46857676 | MS.gene049749:CDS | 35.0% | |
| AACCGAGTTAAATTTATCCC+AGG | + | chr4.2:46859124-46859143 | MS.gene049749:intron | 35.0% | |
| AAGTAAAGAGATGCAACAGT+TGG | + | chr4.2:46856804-46856823 | MS.gene049749:intron | 35.0% | |
| AATAATTTCCAAATCCTGCC+AGG | - | chr4.2:46858887-46858906 | None:intergenic | 35.0% | |
| AATAGAGGTCATCCTGAAAT+CGG | + | chr4.2:46856632-46856651 | MS.gene049749:intron | 35.0% | |
| AATGTCAAGATGGAAAACCT+AGG | + | chr4.2:46854435-46854454 | MS.gene049749:intron | 35.0% | |
| ACAGTTGGAATTAGGAGATA+TGG | + | chr4.2:46856819-46856838 | MS.gene049749:intron | 35.0% | |
| ACATAAGAGATAATAGGGCT+GGG | + | chr4.2:46857658-46857677 | MS.gene049749:CDS | 35.0% | |
| ACATCCATCAAAATGTTTGC+AGG | + | chr4.2:46854556-46854575 | MS.gene049749:intron | 35.0% | |
| ACGAACAGAAACAGAAAAGA+AGG | - | chr4.2:46856266-46856285 | None:intergenic | 35.0% | |
| AGTCAGAATGAATCTCATGA+TGG | + | chr4.2:46853826-46853845 | MS.gene049749:CDS | 35.0% | |
| AGTTGGAATTAGGAGATATG+GGG | + | chr4.2:46856821-46856840 | MS.gene049749:intron | 35.0% | |
| ATGAGAGCAAGGCAATATAA+CGG | - | chr4.2:46856114-46856133 | None:intergenic | 35.0% | |
| ATGAGTTGCTTCAAAGTAGA+AGG | + | chr4.2:46859374-46859393 | MS.gene049749:CDS | 35.0% | |
| ATGTAATTCCTTCTAGACAG+TGG | - | chr4.2:46857695-46857714 | None:intergenic | 35.0% | |
| CAAACAATTGTAGCCAAAAG+AGG | + | chr4.2:46855529-46855548 | MS.gene049749:intron | 35.0% | |
| CAGACGTTTCAAACAGAAAA+TGG | - | chr4.2:46859262-46859281 | None:intergenic | 35.0% | |
| CAGTTGGAATTAGGAGATAT+GGG | + | chr4.2:46856820-46856839 | MS.gene049749:intron | 35.0% | |
| CGACGAATGTGGATAAAAAT+TGG | - | chr4.2:46855626-46855645 | None:intergenic | 35.0% | |
| GAACCCCAAAAATGTTATAG+CGG | - | chr4.2:46856663-46856682 | None:intergenic | 35.0% | |
| GAACTCAAACAGAAACAGAA+TGG | - | chr4.2:46856215-46856234 | None:intergenic | 35.0% | |
| GACAAAATGAGTATATACGG+AGG | + | chr4.2:46854160-46854179 | MS.gene049749:CDS | 35.0% | |
| GTACTTGAACGAAGGAATAA+TGG | + | chr4.2:46853685-46853704 | MS.gene049749:CDS | 35.0% | |
| GTGTCCAAATTGAAGAATGT+CGG | + | chr4.2:46856910-46856929 | MS.gene049749:intron | 35.0% | |
| TAAAAATGTGTGTTCAGTCC+AGG | + | chr4.2:46856994-46857013 | MS.gene049749:intron | 35.0% | |
| TAACACATAGTTACTAGAGG+CGG | - | chr4.2:46858777-46858796 | None:intergenic | 35.0% | |
| TAATAATCAGGTATCCAGTG+AGG | + | chr4.2:46857926-46857945 | MS.gene049749:CDS | 35.0% | |
| TAATGACTTGAGACTTGACA+TGG | + | chr4.2:46858906-46858925 | MS.gene049749:CDS | 35.0% | |
| TAGTGTGATATAGTGTAGTG+TGG | + | chr4.2:46855792-46855811 | MS.gene049749:intron | 35.0% | |
| TATTCGCAGTTGAATGAAAC+TGG | + | chr4.2:46857274-46857293 | MS.gene049749:intron | 35.0% | |
| TCAAACAGAAACAGAATGGA+AGG | - | chr4.2:46856211-46856230 | None:intergenic | 35.0% | |
| TCAAGATCAGATTGTTGATC+AGG | + | chr4.2:46858638-46858657 | MS.gene049749:CDS | 35.0% | |
| TCAGAAATACAGCAAATGAG+TGG | + | chr4.2:46858168-46858187 | MS.gene049749:CDS | 35.0% | |
| TCTGTAGCAGAAAGTGAATT+AGG | + | chr4.2:46854638-46854657 | MS.gene049749:CDS | 35.0% | |
| TGAACCGACATTCTTCAATT+TGG | - | chr4.2:46856917-46856936 | None:intergenic | 35.0% | |
| TGATTTCTTTACCCTTCATC+AGG | + | chr4.2:46859063-46859082 | MS.gene049749:intron | 35.0% | |
| TGCCAAGAAATGGGAAAAAA+AGG | + | chr4.2:46855230-46855249 | MS.gene049749:intron | 35.0% | |
| TGGGAAAAAAAGGCTTCAAA+AGG | + | chr4.2:46855240-46855259 | MS.gene049749:intron | 35.0% | |
| TTCATAAACAATAAGGGGAC+GGG | - | chr4.2:46854787-46854806 | None:intergenic | 35.0% | |
| TTCATAGTAAGATCCCTATG+TGG | - | chr4.2:46856714-46856733 | None:intergenic | 35.0% | |
| TTGTAACCCGTGTTTAATTG+TGG | + | chr4.2:46856058-46856077 | MS.gene049749:intron | 35.0% | |
| TTGTAGCCAAAAGAGGAAAT+AGG | + | chr4.2:46855536-46855555 | MS.gene049749:intron | 35.0% | |
| ! | AATGCCTGCAAACATTTTGA+TGG | - | chr4.2:46854563-46854582 | None:intergenic | 35.0% |
| ! | AATGGTTCTGTTTATCTTGC+AGG | + | chr4.2:46858472-46858491 | MS.gene049749:intron | 35.0% |
| ! | AGCTTGGTCGGAATATTTTA+GGG | + | chr4.2:46855054-46855073 | MS.gene049749:intron | 35.0% |
| ! | CATCAGTTTGTAAGCTTTGT+TGG | - | chr4.2:46857893-46857912 | None:intergenic | 35.0% |
| ! | CATCTACAACAAAAGCACAA+TGG | - | chr4.2:46859322-46859341 | None:intergenic | 35.0% |
| ! | CATTAGCTCTTTGTTTGAAC+AGG | + | chr4.2:46857490-46857509 | MS.gene049749:intron | 35.0% |
| ! | CCACATTTTTGCCAAGAAAT+GGG | + | chr4.2:46855221-46855240 | MS.gene049749:intron | 35.0% |
| ! | CTGTTTGAGTTCTTCTTTCT+TGG | + | chr4.2:46856223-46856242 | MS.gene049749:intron | 35.0% |
| ! | GATGACTGCTATTGCAATTT+TGG | + | chr4.2:46855943-46855962 | MS.gene049749:intron | 35.0% |
| ! | TATCTGAGATTGACCACATA+GGG | + | chr4.2:46856698-46856717 | MS.gene049749:intron | 35.0% |
| ! | TCCACATTTTTGCCAAGAAA+TGG | + | chr4.2:46855220-46855239 | MS.gene049749:intron | 35.0% |
| ! | TGACTGCTATTGCAATTTTG+GGG | + | chr4.2:46855945-46855964 | MS.gene049749:intron | 35.0% |
| ! | TGCTTATGTCTTTTTCTGAC+GGG | + | chr4.2:46856365-46856384 | MS.gene049749:intron | 35.0% |
| ! | TGTTTGATGAGGTATCAGAT+AGG | - | chr4.2:46857569-46857588 | None:intergenic | 35.0% |
| ! | TGTTTTCGGAGAAGTTGAAA+GGG | + | chr4.2:46853888-46853907 | MS.gene049749:CDS | 35.0% |
| ! | TTCAGTTTTGCATATGCCTT+GGG | - | chr4.2:46855442-46855461 | None:intergenic | 35.0% |
| !! | AGTTGAATGAAACTGGTTTG+AGG | + | chr4.2:46857281-46857300 | MS.gene049749:intron | 35.0% |
| !! | GGAAGCATGATTTTGATCAA+TGG | + | chr4.2:46856315-46856334 | MS.gene049749:intron | 35.0% |
| !! | GTTGAATGAAACTGGTTTGA+GGG | + | chr4.2:46857282-46857301 | MS.gene049749:intron | 35.0% |
| !! | TAAACTTGTTGAGGGTATAG+TGG | + | chr4.2:46856006-46856025 | MS.gene049749:intron | 35.0% |
| !! | TCTACTTTGAAGCAACTCAT+TGG | - | chr4.2:46859374-46859393 | None:intergenic | 35.0% |
| !! | TTGTGCTTTTGTTGTAGATG+TGG | + | chr4.2:46859322-46859341 | MS.gene049749:intron | 35.0% |
| !!! | AGCCTTTTTTTCCCATTTCT+TGG | - | chr4.2:46855235-46855254 | None:intergenic | 35.0% |
| !!! | GCTATAACATTTTTGGGGTT+CGG | + | chr4.2:46856662-46856681 | MS.gene049749:intron | 35.0% |
| !!! | GTTCAGCAACTGAACTTTTT+TGG | - | chr4.2:46856967-46856986 | None:intergenic | 35.0% |
| !!! | TGTTCGTGTTTTGTTTTCTG+AGG | + | chr4.2:46856279-46856298 | MS.gene049749:intron | 35.0% |
| !!! | TTTTGCAACGTATTGGTTCA+GGG | - | chr4.2:46855273-46855292 | None:intergenic | 35.0% |
| AAATTCCCACTGCATTCAGA+TGG | + | chr4.2:46857334-46857353 | MS.gene049749:intron | 40.0% | |
| AACTCAGGGAACTTCATAGT+AGG | + | chr4.2:46858384-46858403 | MS.gene049749:CDS | 40.0% | |
| AAGACAAGGTCATGCTAACA+TGG | + | chr4.2:46858566-46858585 | MS.gene049749:CDS | 40.0% | |
| AAGCAGCCACAATTAAACAC+GGG | - | chr4.2:46856067-46856086 | None:intergenic | 40.0% | |
| AAGTCTGTTTCGCATTACCT+AGG | - | chr4.2:46854455-46854474 | None:intergenic | 40.0% | |
| AAGTTGAAAGGGAAAGAGTG+CGG | + | chr4.2:46853899-46853918 | MS.gene049749:CDS | 40.0% | |
| AATCTACTGCCCATGTAGAA+GGG | + | chr4.2:46857736-46857755 | MS.gene049749:CDS | 40.0% | |
| ACAAAAAGCCCGTTGTTGTA+AGG | - | chr4.2:46857242-46857261 | None:intergenic | 40.0% | |
| ACAGATCTGTTGACCATAAC+AGG | + | chr4.2:46854609-46854628 | MS.gene049749:CDS | 40.0% | |
| ACATAATGAGCAATCTGAGC+TGG | + | chr4.2:46857950-46857969 | MS.gene049749:CDS | 40.0% | |
| ACATGGCTAGATTACAGCAA+AGG | + | chr4.2:46858923-46858942 | MS.gene049749:CDS | 40.0% | |
| ACGAATTGCCTTACAACAAC+GGG | + | chr4.2:46857231-46857250 | MS.gene049749:intron | 40.0% | |
| AGAAGAAGTGAAAGTCCTAG+GGG | + | chr4.2:46853964-46853983 | MS.gene049749:CDS | 40.0% | |
| AGATCAGATTGTTGATCAGG+AGG | + | chr4.2:46858641-46858660 | MS.gene049749:CDS | 40.0% | |
| AGGAAAGGGTGAGAGTTATA+AGG | + | chr4.2:46854010-46854029 | MS.gene049749:CDS | 40.0% | |
| AGGATGTAGAAAACCCTCAT+CGG | + | chr4.2:46858213-46858232 | MS.gene049749:CDS | 40.0% | |
| AGGCAAAGACAAACTGTATC+AGG | + | chr4.2:46854668-46854687 | MS.gene049749:CDS | 40.0% | |
| ATAAAATGCGGACCTGATGA+AGG | - | chr4.2:46859078-46859097 | None:intergenic | 40.0% | |
| ATATGCTTAAGAAGGCTGAG+AGG | + | chr4.2:46854220-46854239 | MS.gene049749:CDS | 40.0% | |
| ATCCTGAACATGTGCACAAA+TGG | - | chr4.2:46859348-46859367 | None:intergenic | 40.0% | |
| ATTTGTCGTTAACCACAGTG+AGG | + | chr4.2:46854137-46854156 | MS.gene049749:CDS | 40.0% | |
| CACGAATTGCCTTACAACAA+CGG | + | chr4.2:46857230-46857249 | MS.gene049749:intron | 40.0% | |
| CAGAAGAAGTGAAAGTCCTA+GGG | + | chr4.2:46853963-46853982 | MS.gene049749:CDS | 40.0% | |
| CATAAGAGATAATAGGGCTG+GGG | + | chr4.2:46857659-46857678 | MS.gene049749:CDS | 40.0% | |
| CATAATGAGCAATCTGAGCT+GGG | + | chr4.2:46857951-46857970 | MS.gene049749:CDS | 40.0% | |
| CCCATTTCTTGGCAAAAATG+TGG | - | chr4.2:46855224-46855243 | None:intergenic | 40.0% | |
| CTTTGCACAGAAATAGAGCA+AGG | - | chr4.2:46856177-46856196 | None:intergenic | 40.0% | |
| GAACCAATACGTTGCAAAAG+CGG | + | chr4.2:46855274-46855293 | MS.gene049749:intron | 40.0% | |
| GAAGAACTCAAATGAGAGCA+AGG | - | chr4.2:46856125-46856144 | None:intergenic | 40.0% | |
| GAAGTTTGGCAAGAAGATAG+TGG | + | chr4.2:46858248-46858267 | MS.gene049749:CDS | 40.0% | |
| GACAAACTGTATCAGGTCTA+AGG | + | chr4.2:46854675-46854694 | MS.gene049749:CDS | 40.0% | |
| GAGATGCAACAGTTGGAATT+AGG | + | chr4.2:46856811-46856830 | MS.gene049749:intron | 40.0% | |
| GAGCTGGGTGATATAAGTAA+TGG | + | chr4.2:46857966-46857985 | MS.gene049749:CDS | 40.0% | |
| GATCAGATTGTTGATCAGGA+GGG | + | chr4.2:46858642-46858661 | MS.gene049749:CDS | 40.0% | |
| GGAAAGGGTGAGAGTTATAA+GGG | + | chr4.2:46854011-46854030 | MS.gene049749:CDS | 40.0% | |
| GGATATTGAGGATGAACATG+CGG | + | chr4.2:46853630-46853649 | MS.gene049749:CDS | 40.0% | |
| GGTGAGAGTTATAAGGGAAT+GGG | + | chr4.2:46854017-46854036 | MS.gene049749:CDS | 40.0% | |
| GTAGGTGAAATGTGAGAGAA+AGG | + | chr4.2:46856854-46856873 | MS.gene049749:intron | 40.0% | |
| GTGAAAGAAGAGATTGCACT+GGG | + | chr4.2:46857820-46857839 | MS.gene049749:CDS | 40.0% | |
| TAAAATGCGGACCTGATGAA+GGG | - | chr4.2:46859077-46859096 | None:intergenic | 40.0% | |
| TACGTATAACCTCCAACACA+GGG | - | chr4.2:46859420-46859439 | None:intergenic | 40.0% | |
| TACTACTTGGAGCAGTTTCA+TGG | - | chr4.2:46858316-46858335 | None:intergenic | 40.0% | |
| TAGAGCAAGGAGTAAAACGA+AGG | - | chr4.2:46856164-46856183 | None:intergenic | 40.0% | |
| TATGCTTAAGAAGGCTGAGA+GGG | + | chr4.2:46854221-46854240 | MS.gene049749:CDS | 40.0% | |
| TCATCGAACCAAACTCAGAA+AGG | + | chr4.2:46855697-46855716 | MS.gene049749:intron | 40.0% | |
| TGAAAACAGTTGGGTCAATG+AGG | + | chr4.2:46858193-46858212 | MS.gene049749:CDS | 40.0% | |
| TGAATCTCATGATGGTCATG+AGG | + | chr4.2:46853834-46853853 | MS.gene049749:CDS | 40.0% | |
| TGGAGAAAGCAGTTCTTGTA+TGG | + | chr4.2:46857620-46857639 | MS.gene049749:CDS | 40.0% | |
| TGTGAAAGAAGAGATTGCAC+TGG | + | chr4.2:46857819-46857838 | MS.gene049749:CDS | 40.0% | |
| TGTGATATAGTGTAGTGTGG+CGG | + | chr4.2:46855795-46855814 | MS.gene049749:intron | 40.0% | |
| TTATCATCCACACTTTCTCC+TGG | + | chr4.2:46858866-46858885 | MS.gene049749:intron | 40.0% | |
| TTATGATACATCGTGTGTGC+AGG | + | chr4.2:46854844-46854863 | MS.gene049749:intron | 40.0% | |
| TTCACTTTCTGCTACAGATG+TGG | - | chr4.2:46854636-46854655 | None:intergenic | 40.0% | |
| TTCAGGGAATGGATGAATAC+TGG | + | chr4.2:46853928-46853947 | MS.gene049749:CDS | 40.0% | |
| TTGAAAATGAAGGAAGTGGC+TGG | + | chr4.2:46858087-46858106 | MS.gene049749:CDS | 40.0% | |
| TTGATCCATCTGAATGCAGT+GGG | - | chr4.2:46857342-46857361 | None:intergenic | 40.0% | |
| TTGCTCATTATGTACCTCAC+TGG | - | chr4.2:46857943-46857962 | None:intergenic | 40.0% | |
| TTTGATCCATCTGAATGCAG+TGG | - | chr4.2:46857343-46857362 | None:intergenic | 40.0% | |
| TTTGTCGTTAACCACAGTGA+GGG | + | chr4.2:46854138-46854157 | MS.gene049749:CDS | 40.0% | |
| ! | AACAAAAGCACAATGGCAGT+CGG | - | chr4.2:46859315-46859334 | None:intergenic | 40.0% |
| ! | AGGAGTATGCGTAAATTACG+CGG | + | chr4.2:46854180-46854199 | MS.gene049749:CDS | 40.0% |
| ! | CAACTGATTCCCTTCTACAT+GGG | - | chr4.2:46857748-46857767 | None:intergenic | 40.0% |
| ! | CGTCTTCTCTTTTGCAAATG+TGG | + | chr4.2:46853605-46853624 | MS.gene049749:CDS | 40.0% |
| ! | CTATCTGAGATTGACCACAT+AGG | + | chr4.2:46856697-46856716 | MS.gene049749:intron | 40.0% |
| ! | CTGTTTTCGGAGAAGTTGAA+AGG | + | chr4.2:46853887-46853906 | MS.gene049749:CDS | 40.0% |
| ! | CTTCTCTTTTGCAAATGTGG+CGG | + | chr4.2:46853608-46853627 | MS.gene049749:CDS | 40.0% |
| ! | GACTGCTATTGCAATTTTGG+GGG | + | chr4.2:46855946-46855965 | MS.gene049749:intron | 40.0% |
| ! | GAGCTTGGTCGGAATATTTT+AGG | + | chr4.2:46855053-46855072 | MS.gene049749:intron | 40.0% |
| ! | GGTTTGGAAGATGCAGTTTT+GGG | + | chr4.2:46853769-46853788 | MS.gene049749:CDS | 40.0% |
| ! | GTCCACATGCTCATTTTCTA+GGG | + | chr4.2:46857119-46857138 | MS.gene049749:intron | 40.0% |
| ! | GTTCAGTTTTGCATATGCCT+TGG | - | chr4.2:46855443-46855462 | None:intergenic | 40.0% |
| ! | TCATTGACCCAACTGTTTTC+AGG | - | chr4.2:46858194-46858213 | None:intergenic | 40.0% |
| ! | TCCTCCTAACCAATTTTCCA+CGG | - | chr4.2:46858285-46858304 | None:intergenic | 40.0% |
| ! | TGTCCACATGCTCATTTTCT+AGG | + | chr4.2:46857118-46857137 | MS.gene049749:intron | 40.0% |
| ! | TGTTTCTTCTGGGGAAAACA+GGG | + | chr4.2:46854065-46854084 | MS.gene049749:CDS | 40.0% |
| ! | TTCTCTTTTGCAAATGTGGC+GGG | + | chr4.2:46853609-46853628 | MS.gene049749:CDS | 40.0% |
| !! | AAATAGCACCGATGAAAGTG+TGG | + | chr4.2:46858133-46858152 | MS.gene049749:CDS | 40.0% |
| !! | ACAACAACGGGCTTTTTGTT+GGG | + | chr4.2:46857243-46857262 | MS.gene049749:intron | 40.0% |
| !! | AGCAGAGAAGTGTTTCTTCT+GGG | + | chr4.2:46854055-46854074 | MS.gene049749:CDS | 40.0% |
| !! | ATGGGAGAAATGGAAGTACT+CGG | + | chr4.2:46853581-46853600 | MS.gene049749:CDS | 40.0% |
| !! | CTTGCTCTATTTCTGTGCAA+AGG | + | chr4.2:46856175-46856194 | MS.gene049749:intron | 40.0% |
| !! | GCTTGGTCGGAATATTTTAG+GGG | + | chr4.2:46855055-46855074 | MS.gene049749:intron | 40.0% |
| !! | GTTGATGATGTGAATGGATC+TGG | + | chr4.2:46858035-46858054 | MS.gene049749:CDS | 40.0% |
| !! | TACAACAACGGGCTTTTTGT+TGG | + | chr4.2:46857242-46857261 | MS.gene049749:intron | 40.0% |
| !! | TGGTTTGGAAGATGCAGTTT+TGG | + | chr4.2:46853768-46853787 | MS.gene049749:CDS | 40.0% |
| !!! | CTTTTGCAACGTATTGGTTC+AGG | - | chr4.2:46855274-46855293 | None:intergenic | 40.0% |
| !!! | TCGTGTTTTGTTTTCTGAGG+TGG | + | chr4.2:46856282-46856301 | MS.gene049749:intron | 40.0% |
| AAACCTGAATGCGATTGCGA+TGG | - | chr4.2:46854302-46854321 | None:intergenic | 45.0% | |
| AACCTGAATGCGATTGCGAT+GGG | - | chr4.2:46854301-46854320 | None:intergenic | 45.0% | |
| AACTCTCACCCTTTCCTGTT+CGG | - | chr4.2:46854007-46854026 | None:intergenic | 45.0% | |
| AACTGAACTCCTATGGTCAG+TGG | + | chr4.2:46855028-46855047 | MS.gene049749:intron | 45.0% | |
| AAGGTCATGCTAACATGGAG+TGG | + | chr4.2:46858571-46858590 | MS.gene049749:CDS | 45.0% | |
| AATCGCACTCACGTATTCCT+GGG | - | chr4.2:46859144-46859163 | None:intergenic | 45.0% | |
| AATTAGGAGATATGGGGCGT+AGG | + | chr4.2:46856827-46856846 | MS.gene049749:intron | 45.0% | |
| ACGTATAACCTCCAACACAG+GGG | - | chr4.2:46859419-46859438 | None:intergenic | 45.0% | |
| AGACGTGTGTCTAATCTCCT+CGG | + | chr4.2:46858495-46858514 | MS.gene049749:CDS | 45.0% | |
| AGCATCCTCATGGTGATAAC+TGG | + | chr4.2:46858730-46858749 | MS.gene049749:CDS | 45.0% | |
| AGGCAGTCATCATTCAGTGA+TGG | + | chr4.2:46857795-46857814 | MS.gene049749:CDS | 45.0% | |
| AGGTCATGCTAACATGGAGT+GGG | + | chr4.2:46858572-46858591 | MS.gene049749:CDS | 45.0% | |
| AGTCATGTTCAAGGAAGAGC+GGG | + | chr4.2:46853655-46853674 | MS.gene049749:CDS | 45.0% | |
| ATAGCCCAGATATAGGAGAG+AGG | + | chr4.2:46853743-46853762 | MS.gene049749:CDS | 45.0% | |
| ATGAGTGGCCTGAAAACAGT+TGG | + | chr4.2:46858183-46858202 | MS.gene049749:CDS | 45.0% | |
| ATTAGGAGATATGGGGCGTA+GGG | + | chr4.2:46856828-46856847 | MS.gene049749:intron | 45.0% | |
| CAAATTGAACGTGTGCGTGA+TGG | + | chr4.2:46854114-46854133 | MS.gene049749:CDS | 45.0% | |
| CACGACTGATGGTAAACAGA+TGG | - | chr4.2:46854375-46854394 | None:intergenic | 45.0% | |
| CACTGGGCAAAATGTTGATG+TGG | + | chr4.2:46857836-46857855 | MS.gene049749:CDS | 45.0% | |
| CAGAAGAAACACTTCTCTGC+TGG | - | chr4.2:46854056-46854075 | None:intergenic | 45.0% | |
| CCAGAAGAAGTGAAAGTCCT+AGG | + | chr4.2:46853962-46853981 | MS.gene049749:CDS | 45.0% | |
| CCTAGGACTTTCACTTCTTC+TGG | - | chr4.2:46853965-46853984 | None:intergenic | 45.0% | |
| CGCTTTGCAAGACTATGACA+TGG | - | chr4.2:46855836-46855855 | None:intergenic | 45.0% | |
| CTACAGATGTGGACCTGTTA+TGG | - | chr4.2:46854625-46854644 | None:intergenic | 45.0% | |
| CTATTCGGTTAAGTTAGGGG+TGG | - | chr4.2:46854970-46854989 | None:intergenic | 45.0% | |
| CTGTGAATCCCTCAAAAACG+AGG | - | chr4.2:46853536-46853555 | None:intergenic | 45.0% | |
| GAAAACGTGATACAGCCTGA+TGG | - | chr4.2:46854278-46854297 | None:intergenic | 45.0% | |
| GAATCTACTGCCCATGTAGA+AGG | + | chr4.2:46857735-46857754 | MS.gene049749:CDS | 45.0% | |
| GACCCTAGAAAATGAGCATG+TGG | - | chr4.2:46857124-46857143 | None:intergenic | 45.0% | |
| GAGAGAAATTCACGAGTTGC+TGG | + | chr4.2:46854251-46854270 | MS.gene049749:CDS | 45.0% | |
| GAGTCATGTTCAAGGAAGAG+CGG | + | chr4.2:46853654-46853673 | MS.gene049749:CDS | 45.0% | |
| GCAATAGCGGCAACAATTTG+CGG | + | chr4.2:46855871-46855890 | MS.gene049749:intron | 45.0% | |
| GCTATTGCTGCTACTCTCAA+CGG | - | chr4.2:46855859-46855878 | None:intergenic | 45.0% | |
| GCTGACATAGTGGTTATTGC+TGG | + | chr4.2:46855138-46855157 | MS.gene049749:intron | 45.0% | |
| GGAAGGATTCTTCTCCAGAA+TGG | + | chr4.2:46857512-46857531 | MS.gene049749:CDS | 45.0% | |
| GGCAAAAATGTGGAACACGA+GGG | - | chr4.2:46855214-46855233 | None:intergenic | 45.0% | |
| GGCAGTCATCATTCAGTGAT+GGG | + | chr4.2:46857796-46857815 | MS.gene049749:CDS | 45.0% | |
| GGCATCAGAGTAACACTGAA+TGG | + | chr4.2:46858108-46858127 | MS.gene049749:CDS | 45.0% | |
| GGGTGAGAGTTATAAGGGAA+TGG | + | chr4.2:46854016-46854035 | MS.gene049749:CDS | 45.0% | |
| GTACGTATAACCTCCAACAC+AGG | - | chr4.2:46859421-46859440 | None:intergenic | 45.0% | |
| GTACTGTCTTACACGACTGA+TGG | - | chr4.2:46854386-46854405 | None:intergenic | 45.0% | |
| GTGAAGCAGTACTTGAACGA+AGG | + | chr4.2:46853677-46853696 | MS.gene049749:CDS | 45.0% | |
| GTTGAGAGTAGCAGCAATAG+CGG | + | chr4.2:46855858-46855877 | MS.gene049749:intron | 45.0% | |
| TACTATGCAGAGGATGCTTG+AGG | + | chr4.2:46858951-46858970 | MS.gene049749:CDS | 45.0% | |
| TCAAACCACACTACAGTAGC+AGG | - | chr4.2:46855925-46855944 | None:intergenic | 45.0% | |
| TCTCCTATATCTGGGCTATC+AGG | - | chr4.2:46853742-46853761 | None:intergenic | 45.0% | |
| TGAGTGGCCTGAAAACAGTT+GGG | + | chr4.2:46858184-46858203 | MS.gene049749:CDS | 45.0% | |
| TGGAGAAACCGAACAGGAAA+GGG | + | chr4.2:46853996-46854015 | MS.gene049749:CDS | 45.0% | |
| TGGCAAAAATGTGGAACACG+AGG | - | chr4.2:46855215-46855234 | None:intergenic | 45.0% | |
| TGTGTACCAATTTCAGCACG+TGG | - | chr4.2:46854096-46854115 | None:intergenic | 45.0% | |
| TTAAGAAGGCTGAGAGGGAA+AGG | + | chr4.2:46854226-46854245 | MS.gene049749:CDS | 45.0% | |
| TTCTCCAGAATGGACAGTAC+CGG | + | chr4.2:46857522-46857541 | MS.gene049749:CDS | 45.0% | |
| TTGGAGAAACCGAACAGGAA+AGG | + | chr4.2:46853995-46854014 | MS.gene049749:CDS | 45.0% | |
| TTTGAGGGATTCACAGTCTC+AGG | + | chr4.2:46853540-46853559 | MS.gene049749:CDS | 45.0% | |
| ! | ACTCATTTTGTCCCTCACTG+TGG | - | chr4.2:46854152-46854171 | None:intergenic | 45.0% |
| ! | AGAAGATAGTGGCTTCCAAG+AGG | + | chr4.2:46858259-46858278 | MS.gene049749:CDS | 45.0% |
| ! | ATAGCGGTATAGCCGATTTC+AGG | - | chr4.2:46856647-46856666 | None:intergenic | 45.0% |
| ! | GCAACTGATTCCCTTCTACA+TGG | - | chr4.2:46857749-46857768 | None:intergenic | 45.0% |
| ! | GCTCTTTGTTTGAACAGGGA+AGG | + | chr4.2:46857495-46857514 | MS.gene049749:intron | 45.0% |
| ! | GTGTTTCTTCTGGGGAAAAC+AGG | + | chr4.2:46854064-46854083 | MS.gene049749:CDS | 45.0% |
| ! | GTTGAAAAGCAGTGCCATTG+CGG | + | chr4.2:46855893-46855912 | MS.gene049749:intron | 45.0% |
| ! | TGAGGTATCAGATAGGTTGC+TGG | - | chr4.2:46857562-46857581 | None:intergenic | 45.0% |
| ! | TGTTTGCAGGCATTGCTTAG+AGG | + | chr4.2:46854569-46854588 | MS.gene049749:intron | 45.0% |
| !! | CAGCAGAGAAGTGTTTCTTC+TGG | + | chr4.2:46854054-46854073 | MS.gene049749:CDS | 45.0% |
| !! | GCAGAGAAGTGTTTCTTCTG+GGG | + | chr4.2:46854056-46854075 | MS.gene049749:CDS | 45.0% |
| !! | GGCAAGAAGCTTCTGAAGTT+TGG | + | chr4.2:46858234-46858253 | MS.gene049749:CDS | 45.0% |
| !!! | AGTTTTGGGTGAGAGTGAGT+CGG | + | chr4.2:46853783-46853802 | MS.gene049749:CDS | 45.0% |
| !! | AAAAAAAAACAAAAAAATTA+GGG | - | chr4.2:46855987-46856006 | None:intergenic | 5.0% |
| !! | TAAAAAAAAACAAAAAAATT+AGG | - | chr4.2:46855988-46856007 | None:intergenic | 5.0% |
| !! | TATTATAATAAATAGTTAAA+TGG | - | chr4.2:46854736-46854755 | None:intergenic | 5.0% |
| !!! | AAACTTTTTTATTTATTTTT+TGG | + | chr4.2:46854805-46854824 | MS.gene049749:intron | 5.0% |
| AATCCTGCCAGGAGAAAGTG+TGG | - | chr4.2:46858876-46858895 | None:intergenic | 50.0% | |
| AATGTGTCATGCCCCTGTGT+TGG | + | chr4.2:46859405-46859424 | MS.gene049749:CDS | 50.0% | |
| ACCTCCTACTCCACCTCTTT+GGG | + | chr4.2:46858704-46858723 | MS.gene049749:CDS | 50.0% | |
| ACCTGAATGCGATTGCGATG+GGG | - | chr4.2:46854300-46854319 | None:intergenic | 50.0% | |
| AGACTATGACATGGCAGTGG+AGG | - | chr4.2:46855827-46855846 | None:intergenic | 50.0% | |
| AGTAGGAGGTGAAGGCAAAG+AGG | - | chr4.2:46858694-46858713 | None:intergenic | 50.0% | |
| AGTGGTTATTGCTGGCGTAG+TGG | + | chr4.2:46855146-46855165 | MS.gene049749:intron | 50.0% | |
| CAAGCTCTACCACTGACCAT+AGG | - | chr4.2:46855040-46855059 | None:intergenic | 50.0% | |
| CACGCCTCTCTCCTATATCT+GGG | - | chr4.2:46853750-46853769 | None:intergenic | 50.0% | |
| CACTTTCTCCTGGCAGGATT+TGG | + | chr4.2:46858876-46858895 | MS.gene049749:intron | 50.0% | |
| CAGAAGCTTCTTGCCGATGA+GGG | - | chr4.2:46858229-46858248 | None:intergenic | 50.0% | |
| CATGCGGTGAGTCATGTTCA+AGG | + | chr4.2:46853646-46853665 | MS.gene049749:CDS | 50.0% | |
| CCAATACGTTGCAAAAGCGG+TGG | + | chr4.2:46855277-46855296 | MS.gene049749:intron | 50.0% | |
| CTATGGTCAGTGGTAGAGCT+TGG | + | chr4.2:46855038-46855057 | MS.gene049749:intron | 50.0% | |
| CTGCTCAAGGTTAGCAGAAG+GGG | - | chr4.2:46858613-46858632 | None:intergenic | 50.0% | |
| GAATCGCACTCACGTATTCC+TGG | - | chr4.2:46859145-46859164 | None:intergenic | 50.0% | |
| GACTATGACATGGCAGTGGA+GGG | - | chr4.2:46855826-46855845 | None:intergenic | 50.0% | |
| GAGGATGCTTGAGGCATGTA+TGG | + | chr4.2:46858960-46858979 | MS.gene049749:CDS | 50.0% | |
| GAGGCCGTGGAAAATTGGTT+AGG | + | chr4.2:46858278-46858297 | MS.gene049749:CDS | 50.0% | |
| GATCTTGACTCTGCTGCTCA+AGG | - | chr4.2:46858626-46858645 | None:intergenic | 50.0% | |
| GCAAGACTATGACATGGCAG+TGG | - | chr4.2:46855830-46855849 | None:intergenic | 50.0% | |
| GCAATCCTGCTACTGTAGTG+TGG | + | chr4.2:46855917-46855936 | MS.gene049749:intron | 50.0% | |
| GCACCTGATAGCCCAGATAT+AGG | + | chr4.2:46853736-46853755 | MS.gene049749:CDS | 50.0% | |
| GCCGTGGAAAATTGGTTAGG+AGG | + | chr4.2:46858281-46858300 | MS.gene049749:CDS | 50.0% | |
| GCTGCTCAAGGTTAGCAGAA+GGG | - | chr4.2:46858614-46858633 | None:intergenic | 50.0% | |
| GGAGCAGTTTCATGGTCAGA+AGG | - | chr4.2:46858308-46858327 | None:intergenic | 50.0% | |
| GGCCATTTGTGCACATGTTC+AGG | + | chr4.2:46859343-46859362 | MS.gene049749:CDS | 50.0% | |
| GTAGGAGGTGAAGGCAAAGA+GGG | - | chr4.2:46858693-46858712 | None:intergenic | 50.0% | |
| GTGAAAGTCCTAGGGGAGAA+TGG | + | chr4.2:46853971-46853990 | MS.gene049749:CDS | 50.0% | |
| GTGAGAGTGAGTCGGATACA+TGG | + | chr4.2:46853791-46853810 | MS.gene049749:CDS | 50.0% | |
| TATACTGCATGCTGGCGTAG+TGG | - | chr4.2:46855307-46855326 | None:intergenic | 50.0% | |
| TCAACTGGTCAAGACTCGCA+CGG | - | chr4.2:46858530-46858549 | None:intergenic | 50.0% | |
| TCAGAAGCTTCTTGCCGATG+AGG | - | chr4.2:46858230-46858249 | None:intergenic | 50.0% | |
| TCCAAGAGGCCGTGGAAAAT+TGG | + | chr4.2:46858273-46858292 | MS.gene049749:CDS | 50.0% | |
| TCTGGTGACCACTGTCTAGA+AGG | + | chr4.2:46857684-46857703 | MS.gene049749:CDS | 50.0% | |
| TGAGGATGCTGATCCCAAAG+AGG | - | chr4.2:46858720-46858739 | None:intergenic | 50.0% | |
| TGATCCCAAAGAGGTGGAGT+AGG | - | chr4.2:46858711-46858730 | None:intergenic | 50.0% | |
| TGCAGTTGAGTTCACTGTGC+AGG | + | chr4.2:46857049-46857068 | MS.gene049749:intron | 50.0% | |
| TGCGACCAGTTATCACCATG+AGG | - | chr4.2:46858738-46858757 | None:intergenic | 50.0% | |
| TGCTAACATGGAGTGGGATC+CGG | + | chr4.2:46858578-46858597 | MS.gene049749:CDS | 50.0% | |
| TGCTGCTCAAGGTTAGCAGA+AGG | - | chr4.2:46858615-46858634 | None:intergenic | 50.0% | |
| TTTGCATATGCCTTGGGCAG+TGG | - | chr4.2:46855436-46855455 | None:intergenic | 50.0% | |
| ! | AACACAGGGGCATGACACAT+TGG | - | chr4.2:46859406-46859425 | None:intergenic | 50.0% |
| ! | AATCGCTCAGCTGGTTCATC+AGG | + | chr4.2:46859036-46859055 | MS.gene049749:CDS | 50.0% |
| ! | ACACAGGGGCATGACACATT+GGG | - | chr4.2:46859405-46859424 | None:intergenic | 50.0% |
| ! | ACCAATTTTCCACGGCCTCT+TGG | - | chr4.2:46858277-46858296 | None:intergenic | 50.0% |
| ! | ATGGCTTGGAGAAACCGAAC+AGG | + | chr4.2:46853990-46854009 | MS.gene049749:CDS | 50.0% |
| ! | CAGATAGGTTGCTGGTTGCT+TGG | - | chr4.2:46857554-46857573 | None:intergenic | 50.0% |
| ! | CGTCTGTAGCTAGTTTGCAC+CGG | + | chr4.2:46859276-46859295 | MS.gene049749:intron | 50.0% |
| ! | GATAATAGGGCTGGGGTATC+TGG | + | chr4.2:46857666-46857685 | MS.gene049749:CDS | 50.0% |
| ! | GCAAATGTGGCGGGATATTG+AGG | + | chr4.2:46853618-46853637 | MS.gene049749:CDS | 50.0% |
| ! | TATAGGAGAGAGGCGTGGTT+TGG | + | chr4.2:46853753-46853772 | MS.gene049749:CDS | 50.0% |
| !! | AAAGAGTGCGGCGAGTTTTC+AGG | + | chr4.2:46853911-46853930 | MS.gene049749:CDS | 50.0% |
| !! | AAGAGTGCGGCGAGTTTTCA+GGG | + | chr4.2:46853912-46853931 | MS.gene049749:CDS | 50.0% |
| !! | ATGGCTTGGTTCGACGAATG+TGG | - | chr4.2:46855637-46855656 | None:intergenic | 50.0% |
| !! | CCACCGCTTTTGCAACGTAT+TGG | - | chr4.2:46855280-46855299 | None:intergenic | 50.0% |
| !! | CTTTGGGATCAGCATCCTCA+TGG | + | chr4.2:46858720-46858739 | MS.gene049749:CDS | 50.0% |
| !! | GCTCGACTCCTCGTTTTTGA+GGG | + | chr4.2:46853525-46853544 | MS.gene049749:CDS | 50.0% |
| !! | GGCAGTGGTGGATCTTAGTT+AGG | - | chr4.2:46855421-46855440 | None:intergenic | 50.0% |
| !! | TGCTCGACTCCTCGTTTTTG+AGG | + | chr4.2:46853524-46853543 | MS.gene049749:CDS | 50.0% |
| !! | TGGTGCTCTAGAAGAACAGC+TGG | + | chr4.2:46858055-46858074 | MS.gene049749:CDS | 50.0% |
| !! | TTCTGAGGTGGACACAGATG+TGG | + | chr4.2:46856294-46856313 | MS.gene049749:intron | 50.0% |
| AGAGGTGGAGTAGGAGGTGA+AGG | - | chr4.2:46858702-46858721 | None:intergenic | 55.0% | |
| AGGAGGGGAGATGGGAGAAA+TGG | + | chr4.2:46853571-46853590 | MS.gene049749:CDS | 55.0% | |
| AGTCCTAGGGGAGAATGGCT+TGG | + | chr4.2:46853976-46853995 | MS.gene049749:CDS | 55.0% | |
| ATATGGGGCGTAGGGCATGT+AGG | + | chr4.2:46856836-46856855 | MS.gene049749:intron | 55.0% | |
| CACCTCCTACTCCACCTCTT+TGG | + | chr4.2:46858703-46858722 | MS.gene049749:CDS | 55.0% | |
| CATCCACACTTTCTCCTGGC+AGG | + | chr4.2:46858870-46858889 | MS.gene049749:intron | 55.0% | |
| CCACGCCTCTCTCCTATATC+TGG | - | chr4.2:46853751-46853770 | None:intergenic | 55.0% | |
| CCAGATATAGGAGAGAGGCG+TGG | + | chr4.2:46853748-46853767 | MS.gene049749:CDS | 55.0% | |
| CTAAGATCCACCACTGCCCA+AGG | + | chr4.2:46855423-46855442 | MS.gene049749:intron | 55.0% | |
| GAGCAGCCACGTGCTGAAAT+TGG | + | chr4.2:46854087-46854106 | MS.gene049749:CDS | 55.0% | |
| GCAACCGGTACTGTCCATTC+TGG | - | chr4.2:46857529-46857548 | None:intergenic | 55.0% | |
| GCAGCACTAAATCGCTCAGC+TGG | + | chr4.2:46859027-46859046 | MS.gene049749:CDS | 55.0% | |
| GCGTAAATTACGCGGCAGAC+AGG | + | chr4.2:46854188-46854207 | MS.gene049749:CDS | 55.0% | |
| GGATGCTGATCCCAAAGAGG+TGG | - | chr4.2:46858717-46858736 | None:intergenic | 55.0% | |
| GGCAAAGAGGGCAAGTCAAG+TGG | - | chr4.2:46858681-46858700 | None:intergenic | 55.0% | |
| GGTCAGTGGTAGAGCTTGGT+CGG | + | chr4.2:46855042-46855061 | MS.gene049749:intron | 55.0% | |
| TCACGAGTTGCTGGACCATC+AGG | + | chr4.2:46854260-46854279 | MS.gene049749:CDS | 55.0% | |
| TCCCAAAGAGGTGGAGTAGG+AGG | - | chr4.2:46858708-46858727 | None:intergenic | 55.0% | |
| TCCCCATCGCAATCGCATTC+AGG | + | chr4.2:46854296-46854315 | MS.gene049749:CDS | 55.0% | |
| TCGCACGGAAACTACTTCCG+AGG | - | chr4.2:46858515-46858534 | None:intergenic | 55.0% | |
| TCTCCAAGCCATTCTCCCCT+AGG | - | chr4.2:46853982-46854001 | None:intergenic | 55.0% | |
| ! | TGCAGGCATTGCTTAGAGGC+AGG | + | chr4.2:46854573-46854592 | MS.gene049749:intron | 55.0% |
| !! | TGCGGCGAGTTTTCAGGGAA+TGG | + | chr4.2:46853917-46853936 | MS.gene049749:CDS | 55.0% |
| CGTCGAGAAGGAGGGGAGAT+GGG | + | chr4.2:46853563-46853582 | MS.gene049749:CDS | 60.0% | |
| GCAGAAGGGGCTGCATCTTC+CGG | - | chr4.2:46858600-46858619 | None:intergenic | 60.0% | |
| GCATATGCCTTGGGCAGTGG+TGG | - | chr4.2:46855433-46855452 | None:intergenic | 60.0% | |
| GCTGGTTGCTTGGCTGCAAC+CGG | - | chr4.2:46857544-46857563 | None:intergenic | 60.0% | |
| GTAGCAGGATTGCGCCGCAA+TGG | - | chr4.2:46855910-46855929 | None:intergenic | 60.0% | |
| GTGTCATGCCCCTGTGTTGG+AGG | + | chr4.2:46859408-46859427 | MS.gene049749:CDS | 60.0% | |
| TAGTGGCTTCCAAGAGGCCG+TGG | + | chr4.2:46858265-46858284 | MS.gene049749:CDS | 60.0% | |
| !! | AGTCTCAGGCGTCGAGAAGG+AGG | + | chr4.2:46853554-46853573 | MS.gene049749:CDS | 60.0% |
| !! | CACAGTCTCAGGCGTCGAGA+AGG | + | chr4.2:46853551-46853570 | MS.gene049749:CDS | 60.0% |
| !! | GTCTCAGGCGTCGAGAAGGA+GGG | + | chr4.2:46853555-46853574 | MS.gene049749:CDS | 60.0% |
| !! | TCTCAGGCGTCGAGAAGGAG+GGG | + | chr4.2:46853556-46853575 | MS.gene049749:CDS | 60.0% |
| GCGTCGAGAAGGAGGGGAGA+TGG | + | chr4.2:46853562-46853581 | MS.gene049749:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 46853493 | 46859456 | 46853493 | ID=MS.gene049749 |
| chr4.2 | mRNA | 46853493 | 46859456 | 46853493 | ID=MS.gene049749.t1;Parent=MS.gene049749 |
| chr4.2 | exon | 46853493 | 46854317 | 46853493 | ID=MS.gene049749.t1.exon1;Parent=MS.gene049749.t1 |
| chr4.2 | CDS | 46853493 | 46854317 | 46853493 | ID=cds.MS.gene049749.t1;Parent=MS.gene049749.t1 |
| chr4.2 | exon | 46854578 | 46854696 | 46854578 | ID=MS.gene049749.t1.exon2;Parent=MS.gene049749.t1 |
| chr4.2 | CDS | 46854578 | 46854696 | 46854578 | ID=cds.MS.gene049749.t1;Parent=MS.gene049749.t1 |
| chr4.2 | exon | 46857512 | 46858405 | 46857512 | ID=MS.gene049749.t1.exon3;Parent=MS.gene049749.t1 |
| chr4.2 | CDS | 46857512 | 46858405 | 46857512 | ID=cds.MS.gene049749.t1;Parent=MS.gene049749.t1 |
| chr4.2 | exon | 46858494 | 46858764 | 46858494 | ID=MS.gene049749.t1.exon4;Parent=MS.gene049749.t1 |
| chr4.2 | CDS | 46858494 | 46858764 | 46858494 | ID=cds.MS.gene049749.t1;Parent=MS.gene049749.t1 |
| chr4.2 | exon | 46858892 | 46859057 | 46858892 | ID=MS.gene049749.t1.exon5;Parent=MS.gene049749.t1 |
| chr4.2 | CDS | 46858892 | 46859057 | 46858892 | ID=cds.MS.gene049749.t1;Parent=MS.gene049749.t1 |
| chr4.2 | exon | 46859146 | 46859251 | 46859146 | ID=MS.gene049749.t1.exon6;Parent=MS.gene049749.t1 |
| chr4.2 | CDS | 46859146 | 46859251 | 46859146 | ID=cds.MS.gene049749.t1;Parent=MS.gene049749.t1 |
| chr4.2 | exon | 46859339 | 46859456 | 46859339 | ID=MS.gene049749.t1.exon7;Parent=MS.gene049749.t1 |
| chr4.2 | CDS | 46859339 | 46859456 | 46859339 | ID=cds.MS.gene049749.t1;Parent=MS.gene049749.t1 |
| Gene Sequence |
| Protein sequence |
