Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09404.t1 | XP_013455913.1 | 90.5 | 832 | 65 | 1 | 1 | 832 | 1 | 818 | 0.00E+00 | 1389.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09404.t1 | Q0MW30 | 43.6 | 55 | 30 | 1 | 776 | 829 | 490 | 544 | 6.2e-08 | 61.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09404.t1 | A0A072UJM7 | 90.5 | 832 | 65 | 1 | 1 | 832 | 1 | 818 | 0.0e+00 | 1389.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049749 | MS.gene09404 | 0.934436 | 4.05E-96 | -1.69E-46 |
| MS.gene054010 | MS.gene09404 | 0.805742 | 1.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09404.t1 | MTR_4g056600 | 93.389 | 832 | 41 | 1 | 1 | 832 | 1 | 818 | 0.0 | 1486 |
| MS.gene09404.t1 | MTR_2g084475 | 55.631 | 888 | 284 | 17 | 1 | 831 | 1 | 835 | 0.0 | 793 |
| MS.gene09404.t1 | MTR_2g084475 | 53.998 | 913 | 285 | 18 | 1 | 831 | 1 | 860 | 0.0 | 776 |
| MS.gene09404.t1 | MTR_1g090803 | 47.816 | 412 | 180 | 12 | 447 | 832 | 449 | 851 | 6.30e-94 | 313 |
| MS.gene09404.t1 | MTR_1g090803 | 48.295 | 352 | 163 | 9 | 1 | 344 | 110 | 450 | 2.08e-76 | 266 |
| MS.gene09404.t1 | MTR_2g437720 | 35.878 | 131 | 69 | 2 | 701 | 829 | 795 | 912 | 1.60e-16 | 84.7 |
| MS.gene09404.t1 | MTR_4g094795 | 31.008 | 129 | 72 | 2 | 704 | 830 | 702 | 815 | 9.04e-14 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09404.t1 | AT2G27950 | 43.628 | 871 | 420 | 21 | 1 | 832 | 1 | 839 | 0.0 | 561 |
| MS.gene09404.t1 | AT2G27950 | 43.628 | 871 | 420 | 21 | 1 | 832 | 1 | 839 | 0.0 | 561 |
| MS.gene09404.t1 | AT2G27950 | 43.628 | 871 | 420 | 21 | 1 | 832 | 1 | 839 | 0.0 | 561 |
| MS.gene09404.t1 | AT5G04460 | 51.701 | 294 | 121 | 8 | 557 | 832 | 573 | 863 | 4.73e-76 | 265 |
| MS.gene09404.t1 | AT5G04460 | 47.059 | 357 | 165 | 8 | 1 | 340 | 111 | 460 | 4.58e-65 | 234 |
| MS.gene09404.t1 | AT5G04460 | 51.701 | 294 | 121 | 8 | 557 | 832 | 573 | 863 | 4.73e-76 | 265 |
| MS.gene09404.t1 | AT5G04460 | 47.059 | 357 | 165 | 8 | 1 | 340 | 111 | 460 | 4.58e-65 | 234 |
| MS.gene09404.t1 | AT5G04460 | 51.701 | 294 | 121 | 8 | 557 | 832 | 573 | 863 | 4.73e-76 | 265 |
| MS.gene09404.t1 | AT5G04460 | 47.059 | 357 | 165 | 8 | 1 | 340 | 111 | 460 | 4.58e-65 | 234 |
| MS.gene09404.t1 | AT5G04460 | 51.701 | 294 | 121 | 8 | 557 | 832 | 573 | 863 | 4.73e-76 | 265 |
| MS.gene09404.t1 | AT5G04460 | 47.059 | 357 | 165 | 8 | 1 | 340 | 111 | 460 | 4.58e-65 | 234 |
| MS.gene09404.t1 | AT5G04460 | 47.059 | 357 | 165 | 8 | 1 | 340 | 111 | 460 | 6.24e-66 | 234 |
| MS.gene09404.t1 | AT5G04460 | 43.590 | 156 | 74 | 5 | 557 | 700 | 573 | 726 | 8.45e-18 | 89.0 |
| MS.gene09404.t1 | AT5G04460 | 47.059 | 357 | 165 | 8 | 1 | 340 | 111 | 460 | 2.37e-65 | 234 |
| MS.gene09404.t1 | AT5G04460 | 49.609 | 256 | 108 | 8 | 557 | 794 | 573 | 825 | 6.71e-54 | 201 |
| MS.gene09404.t1 | AT4G20160 | 39.286 | 168 | 78 | 6 | 662 | 829 | 1067 | 1210 | 1.01e-27 | 121 |
| MS.gene09404.t1 | AT4G20160 | 39.286 | 168 | 78 | 6 | 662 | 829 | 1065 | 1208 | 1.03e-27 | 121 |
| MS.gene09404.t1 | AT2G34920 | 30.000 | 230 | 112 | 5 | 610 | 829 | 471 | 661 | 3.31e-21 | 99.4 |
| MS.gene09404.t1 | AT2G34920 | 28.182 | 220 | 115 | 4 | 610 | 829 | 471 | 647 | 3.69e-17 | 86.7 |
| MS.gene09404.t1 | AT1G30860 | 30.070 | 143 | 67 | 2 | 686 | 828 | 615 | 724 | 3.22e-16 | 83.6 |
| MS.gene09404.t1 | AT4G20160 | 35.507 | 138 | 63 | 7 | 662 | 799 | 1065 | 1176 | 5.00e-12 | 70.5 |
Find 202 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTAGATGACAATTCTAAA+TGG | 0.202577 | 4.1:+41305378 | MS.gene09404:CDS |
| CACCTCCTACTCCACCTCTT+TGG | 0.211199 | 4.1:+41304917 | MS.gene09404:CDS |
| CTACTAACATAAGAGATAAT+AGG | 0.236862 | 4.1:+41303866 | MS.gene09404:CDS |
| CATCAGTTTGTAAGCTTTGT+TGG | 0.266875 | 4.1:-41304104 | None:intergenic |
| CCCTAGGAATTTCACTTCTT+CGG | 0.278971 | 4.1:-41300175 | None:intergenic |
| ACCTCCTACTCCACCTCTTT+GGG | 0.283684 | 4.1:+41304918 | MS.gene09404:CDS |
| CCTAGGAATTTCACTTCTTC+GGG | 0.284264 | 4.1:-41300174 | None:intergenic |
| AGGAAAGGGTGAGAGTTATA+AGG | 0.288014 | 4.1:+41300222 | MS.gene09404:CDS |
| AGGAGGGGAGATGGGAGAAA+TGG | 0.294607 | 4.1:+41299783 | MS.gene09404:CDS |
| TCCAAGAGGCCGTGGAAAAT+TGG | 0.303562 | 4.1:+41304487 | MS.gene09404:CDS |
| GAGCAGCCACGTGCTGAAAT+TGG | 0.317377 | 4.1:+41300299 | MS.gene09404:CDS |
| GGCAAGAAGCTTCTGAAGTT+TGG | 0.318234 | 4.1:+41304448 | MS.gene09404:CDS |
| CTATTATCTCTTATGTTAGT+AGG | 0.318995 | 4.1:-41303865 | None:intergenic |
| GATAATAGGGCTGGGGTATC+TGG | 0.324693 | 4.1:+41303880 | MS.gene09404:CDS |
| GTACTTGAACGAAGGAATAA+TGG | 0.338393 | 4.1:+41299897 | MS.gene09404:CDS |
| GTGTTTCTTCTGGGGAAAAC+AGG | 0.339469 | 4.1:+41300276 | MS.gene09404:CDS |
| CCACGCCTCTCTCCTATCTC+TGG | 0.343510 | 4.1:-41299960 | None:intergenic |
| TTCAGGGAATGGATGAATAC+TGG | 0.344453 | 4.1:+41300140 | MS.gene09404:CDS |
| TCCCCATCGCAATCGCATTC+AGG | 0.349748 | 4.1:+41300508 | MS.gene09404:CDS |
| GCAGAAGGGGCTGCATCTTC+CGG | 0.353382 | 4.1:-41304811 | None:intergenic |
| GGCCATTTGTGCACATGTTC+AGG | 0.353626 | 4.1:+41305557 | MS.gene09404:CDS |
| GAATCTACTGCCCATGTAGA+AGG | 0.357868 | 4.1:+41303949 | MS.gene09404:CDS |
| ACAGATCTGTTGACCATAAC+AGG | 0.360955 | 4.1:+41300821 | MS.gene09404:CDS |
| CAGCAGAGAAGTGTTTCTTC+TGG | 0.363031 | 4.1:+41300266 | MS.gene09404:CDS |
| AACTCTCACCCTTTCCTGTT+CGG | 0.363975 | 4.1:-41300216 | None:intergenic |
| GATAGGAGAGAGGCGTGGTT+TGG | 0.375120 | 4.1:+41299965 | MS.gene09404:CDS |
| GACAAACTGTATCAGGTCTA+AGG | 0.376673 | 4.1:+41300887 | MS.gene09404:CDS |
| ATCAAATCAAGGTGATTATA+CGG | 0.378500 | 4.1:+41304215 | MS.gene09404:CDS |
| TCAAGATCAGATTGTTGATC+AGG | 0.387523 | 4.1:+41304852 | MS.gene09404:CDS |
| TACTAACATAAGAGATAATA+GGG | 0.390133 | 4.1:+41303867 | MS.gene09404:CDS |
| TTTAATACAAATGAACAAAC+TGG | 0.391228 | 4.1:+41303814 | MS.gene09404:CDS |
| GCGTCGAGAAGGAGGGGAGA+TGG | 0.391523 | 4.1:+41299774 | MS.gene09404:CDS |
| TGGTTTGGAAGACACAGTTT+TGG | 0.392325 | 4.1:+41299980 | MS.gene09404:CDS |
| TACTACTTGGAGCAGTTTCA+TGG | 0.394166 | 4.1:-41304527 | None:intergenic |
| GCTGGTTGCTTGGCTGCAAC+CGG | 0.397760 | 4.1:-41303755 | None:intergenic |
| AGGCAAAGACAAACTGTATC+AGG | 0.398204 | 4.1:+41300880 | MS.gene09404:CDS |
| GCACCTGAGAGCCCAGAGAT+AGG | 0.401725 | 4.1:+41299948 | MS.gene09404:CDS |
| TCTCCTATCTCTGGGCTCTC+AGG | 0.401969 | 4.1:-41299951 | None:intergenic |
| AGCATCCTCATGGTGATAAC+TGG | 0.404311 | 4.1:+41304944 | MS.gene09404:CDS |
| TTTGAGGGATTCACAGTCTC+AGG | 0.406274 | 4.1:+41299752 | MS.gene09404:CDS |
| ATCCTGAACATGTGCACAAA+TGG | 0.406979 | 4.1:-41305559 | None:intergenic |
| AATCGCTCAGCTGGTTCATC+AGG | 0.410026 | 4.1:+41305250 | MS.gene09404:CDS |
| ATGAGTTGCTTCAAAGTAGA+AGG | 0.410878 | 4.1:+41305588 | MS.gene09404:CDS |
| GCAACCGGTACTGTCCATTC+TGG | 0.416909 | 4.1:-41303740 | None:intergenic |
| TCACGAGTTGCTGGACCATC+AGG | 0.422823 | 4.1:+41300472 | MS.gene09404:CDS |
| AAACTTGAAATGGCGATTGC+TGG | 0.423615 | 4.1:+41299696 | None:intergenic |
| TTCAGAGCATAGTAATAATC+AGG | 0.425192 | 4.1:+41304128 | MS.gene09404:CDS |
| CTACAGATGTGGACCTGTTA+TGG | 0.426239 | 4.1:-41300834 | None:intergenic |
| TCTGGTGACCACTGTCTAGA+AGG | 0.426412 | 4.1:+41303898 | MS.gene09404:CDS |
| CAGATAGGTTGCTGGTTGCT+TGG | 0.427588 | 4.1:-41303765 | None:intergenic |
| GGAAAGGGTGAGAGTTATAA+GGG | 0.430274 | 4.1:+41300223 | MS.gene09404:CDS |
| AGGGACAAAATGAGTATATA+CGG | 0.433117 | 4.1:+41300369 | MS.gene09404:CDS |
| TGTTTGCAGGCATTGCTTAG+AGG | 0.436393 | 4.1:+41300781 | MS.gene09404:intron |
| TGCAGGCATTGCTTAGAGGC+AGG | 0.437562 | 4.1:+41300785 | MS.gene09404:intron |
| TTGTATACATTGTCATCATC+AGG | 0.440785 | 4.1:-41304570 | None:intergenic |
| CAACATATGATTGTATCAAC+TGG | 0.442570 | 4.1:-41304756 | None:intergenic |
| CGTCGAGAAGGAGGGGAGAT+GGG | 0.443422 | 4.1:+41299775 | MS.gene09404:CDS |
| GCGTAAATTACGCGGCAGAC+AGG | 0.448710 | 4.1:+41300400 | MS.gene09404:CDS |
| TGCTAACATGGAGTGGGATC+CGG | 0.449305 | 4.1:+41304792 | MS.gene09404:CDS |
| GAGAGAAATTCACGAGTTGC+TGG | 0.450529 | 4.1:+41300463 | MS.gene09404:CDS |
| TACTTGAACGAAGGAATAAT+GGG | 0.453614 | 4.1:+41299898 | MS.gene09404:CDS |
| CCCGAAGAAGTGAAATTCCT+AGG | 0.457905 | 4.1:+41300174 | MS.gene09404:CDS |
| GGGTGAGAGTTATAAGGGAA+TGG | 0.463412 | 4.1:+41300228 | MS.gene09404:CDS |
| TCTACTTTGAAGCAACTCAT+TGG | 0.464087 | 4.1:-41305585 | None:intergenic |
| GAGGATGCTTGAGGCATGTA+TGG | 0.465292 | 4.1:+41305174 | MS.gene09404:CDS |
| TCTGTAGCAGAAAGTGAATT+AGG | 0.468211 | 4.1:+41300850 | MS.gene09404:CDS |
| AGCAGAGAAGTGTTTCTTCT+GGG | 0.468948 | 4.1:+41300267 | MS.gene09404:CDS |
| ACTAGATGACAATTCTAAAT+GGG | 0.469701 | 4.1:+41305379 | MS.gene09404:CDS |
| TGGAGAAAGCAGTTCTTGTA+TGG | 0.473122 | 4.1:+41303834 | MS.gene09404:CDS |
| AACATAAGAGATAATAGGGC+TGG | 0.474807 | 4.1:+41303871 | MS.gene09404:CDS |
| GTTGATGATGTGAATGGATC+TGG | 0.481816 | 4.1:+41304249 | MS.gene09404:CDS |
| ATATTGATTCTTTATTGTAC+AGG | 0.482450 | 4.1:+41305444 | MS.gene09404:CDS |
| CAGAAGCTTCTTGCCGATGA+GGG | 0.484301 | 4.1:-41304440 | None:intergenic |
| ACATAATGAGCAATCTGAGC+TGG | 0.491558 | 4.1:+41304164 | MS.gene09404:CDS |
| AAATGGGAATGTGTGAGAAA+AGG | 0.491566 | 4.1:+41305395 | MS.gene09404:CDS |
| ACATAAGAGATAATAGGGCT+GGG | 0.492697 | 4.1:+41303872 | MS.gene09404:CDS |
| TATGCTTGATATGCTTAAGA+AGG | 0.494043 | 4.1:+41300424 | MS.gene09404:CDS |
| ACACAGGGGCATGACACATT+GGG | 0.495087 | 4.1:-41305616 | None:intergenic |
| TGAGGTATCAGATAGGTTGC+TGG | 0.495149 | 4.1:-41303773 | None:intergenic |
| CAGAAGAAACACTTCTCTGC+TGG | 0.495392 | 4.1:-41300265 | None:intergenic |
| GAAGTTTGGCAAGAAGATAG+TGG | 0.496390 | 4.1:+41304462 | MS.gene09404:CDS |
| GGTGAGAGTTATAAGGGAAT+GGG | 0.498358 | 4.1:+41300229 | MS.gene09404:CDS |
| TGGTGCTCTAGAAGAACAGC+TGG | 0.499590 | 4.1:+41304269 | MS.gene09404:CDS |
| AACCTGAATGCGATTGCGAT+GGG | 0.500742 | 4.1:-41300510 | None:intergenic |
| GTGTCATGCCCCTGTGTTGG+AGG | 0.503473 | 4.1:+41305622 | MS.gene09404:CDS |
| GCAACTGATTCCCTTCTACA+TGG | 0.505549 | 4.1:-41303960 | None:intergenic |
| ATTATCATCCACACTTTCAT+CGG | 0.507455 | 4.1:-41304355 | None:intergenic |
| CTGCTCAAGGTTAGCAGAAG+GGG | 0.510161 | 4.1:-41304824 | None:intergenic |
| GGCATCAGAGTAACACTGAA+TGG | 0.512613 | 4.1:+41304322 | MS.gene09404:CDS |
| CACGCCTCTCTCCTATCTCT+GGG | 0.513121 | 4.1:-41299959 | None:intergenic |
| ATTCCTAGGGGAGAGTGGCT+TGG | 0.515877 | 4.1:+41300188 | MS.gene09404:CDS |
| GTGGCTTGGAGAAACCGAAC+AGG | 0.516282 | 4.1:+41300202 | MS.gene09404:CDS |
| TTGCTCATTATGTACCTCAC+TGG | 0.519396 | 4.1:-41304154 | None:intergenic |
| TGCAAATTGAGTCAGTAGAT+AGG | 0.521323 | 4.1:+41303989 | MS.gene09404:CDS |
| GTACGTATAACCTCCAACAC+AGG | 0.522112 | 4.1:-41305632 | None:intergenic |
| GCAGCACTAAATCGCTCAGC+TGG | 0.523696 | 4.1:+41305241 | MS.gene09404:CDS |
| AACACAGGGGCATGACACAT+TGG | 0.524870 | 4.1:-41305617 | None:intergenic |
| GCAAATGTGGCGGGATATTG+AGG | 0.524908 | 4.1:+41299830 | MS.gene09404:CDS |
| ATGAGTGGCCTGAAAACAGT+TGG | 0.525968 | 4.1:+41304397 | MS.gene09404:CDS |
| GAAAACAATTCATCAAATCA+AGG | 0.526616 | 4.1:+41304204 | MS.gene09404:CDS |
| AGAGGTGGAGTAGGAGGTGA+AGG | 0.526630 | 4.1:-41304913 | None:intergenic |
| GAGGCCGTGGAAAATTGGTT+AGG | 0.527945 | 4.1:+41304492 | MS.gene09404:CDS |
| AATGTGTCATGCCCCTGTGT+TGG | 0.528835 | 4.1:+41305619 | MS.gene09404:CDS |
| TTCACTTTCTGCTACAGATG+TGG | 0.530455 | 4.1:-41300845 | None:intergenic |
| TTAAGAAGGCTGAGAGGGAA+AGG | 0.531448 | 4.1:+41300438 | MS.gene09404:CDS |
| ATGTATACAATGTTGAACTC+AGG | 0.531948 | 4.1:+41304583 | MS.gene09404:CDS |
| TAACTATGAACTCTACTACT+TGG | 0.532761 | 4.1:-41304540 | None:intergenic |
| CCGAAGAAGTGAAATTCCTA+GGG | 0.535421 | 4.1:+41300175 | MS.gene09404:CDS |
| TCTCAGGCGTCGAGAAGGAG+GGG | 0.536916 | 4.1:+41299768 | MS.gene09404:CDS |
| CTTTGGGATCAGCATCCTCA+TGG | 0.541128 | 4.1:+41304934 | MS.gene09404:CDS |
| GTCTCAGGCGTCGAGAAGGA+GGG | 0.543683 | 4.1:+41299767 | MS.gene09404:CDS |
| TGGAGAAACCGAACAGGAAA+GGG | 0.545519 | 4.1:+41300208 | MS.gene09404:CDS |
| TAGTGGCTTCCAAGAGGCCG+TGG | 0.546285 | 4.1:+41304479 | MS.gene09404:CDS |
| GAACAAATTGTTGAAAATGA+AGG | 0.547123 | 4.1:+41304291 | MS.gene09404:CDS |
| GGAAGGATTCTTCTCCAGAA+TGG | 0.547490 | 4.1:+41303726 | MS.gene09404:CDS |
| GTGAAATTCCTAGGGGAGAG+TGG | 0.552088 | 4.1:+41300183 | MS.gene09404:CDS |
| ATCAATATCAATGTTTGATG+AGG | 0.552491 | 4.1:-41303791 | None:intergenic |
| TTCTCCAGAATGGACAGTAC+CGG | 0.554594 | 4.1:+41303736 | MS.gene09404:CDS |
| AGTCATGTTCAAGGAAGAGC+TGG | 0.556084 | 4.1:+41299867 | MS.gene09404:CDS |
| GGCAGTCATCATTCAGTGAT+GGG | 0.556282 | 4.1:+41304010 | MS.gene09404:CDS |
| AAACCTGAATGCGATTGCGA+TGG | 0.557623 | 4.1:-41300511 | None:intergenic |
| AGGCAGTCATCATTCAGTGA+TGG | 0.562606 | 4.1:+41304009 | MS.gene09404:CDS |
| TGCTGCTCAAGGTTAGCAGA+AGG | 0.562718 | 4.1:-41304826 | None:intergenic |
| TTGGAGAAACCGAACAGGAA+AGG | 0.563762 | 4.1:+41300207 | MS.gene09404:CDS |
| CACAGTCTCAGGCGTCGAGA+AGG | 0.564701 | 4.1:+41299763 | MS.gene09404:CDS |
| CATAATGAGCAATCTGAGCT+GGG | 0.565927 | 4.1:+41304165 | MS.gene09404:CDS |
| TCAGAAGCTTCTTGCCGATG+AGG | 0.566572 | 4.1:-41304441 | None:intergenic |
| GTAGGAGGTGAAGGCAAAGA+GGG | 0.566610 | 4.1:-41304904 | None:intergenic |
| CATGCGGTGAGTCATGTTCA+AGG | 0.567237 | 4.1:+41299858 | MS.gene09404:CDS |
| TGTTTGATGAGGTATCAGAT+AGG | 0.568109 | 4.1:-41303780 | None:intergenic |
| TACGTATAACCTCCAACACA+GGG | 0.568125 | 4.1:-41305631 | None:intergenic |
| TCTCCAAGCCACTCTCCCCT+AGG | 0.570313 | 4.1:-41300191 | None:intergenic |
| AGTCTCAGGCGTCGAGAAGG+AGG | 0.570485 | 4.1:+41299766 | MS.gene09404:CDS |
| AATGTTGTTGATGATGTGAA+TGG | 0.570524 | 4.1:+41304243 | MS.gene09404:CDS |
| GATCTTGACTCTGCTGCTCA+AGG | 0.570783 | 4.1:-41304837 | None:intergenic |
| AAGACAAGGTCATGCTAACA+TGG | 0.573015 | 4.1:+41304780 | MS.gene09404:CDS |
| TGAGTGGCCTGAAAACAGTT+GGG | 0.573179 | 4.1:+41304398 | MS.gene09404:CDS |
| GTGAGAGTGAGTCGGATACA+TGG | 0.573797 | 4.1:+41300003 | MS.gene09404:CDS |
| TCCCAAAGAGGTGGAGTAGG+AGG | 0.575347 | 4.1:-41304919 | None:intergenic |
| AAAGTGAATTAGGCTTATTG+AGG | 0.577540 | 4.1:+41300860 | MS.gene09404:CDS |
| TGTTTCTTCTGGGGAAAACA+GGG | 0.577546 | 4.1:+41300277 | MS.gene09404:CDS |
| TGTATACAATGTTGAACTCA+GGG | 0.579146 | 4.1:+41304584 | MS.gene09404:CDS |
| AATCTACTGCCCATGTAGAA+GGG | 0.580314 | 4.1:+41303950 | MS.gene09404:CDS |
| AACTCAGGGAACTTCATAGT+AGG | 0.580482 | 4.1:+41304598 | MS.gene09404:CDS |
| AAGGAATAATGGGTCGATTG+CGG | 0.581024 | 4.1:+41299908 | MS.gene09404:CDS |
| GCCGTGGAAAATTGGTTAGG+AGG | 0.582438 | 4.1:+41304495 | MS.gene09404:CDS |
| GGAGCAGTTTCATGGTCAGA+AGG | 0.584695 | 4.1:-41304519 | None:intergenic |
| GCTGCTCAAGGTTAGCAGAA+GGG | 0.585322 | 4.1:-41304825 | None:intergenic |
| GGCAAAGAGGGCAAGTCAAG+TGG | 0.585826 | 4.1:-41304892 | None:intergenic |
| ATTGTTGAAAATGAAGGAAG+TGG | 0.588621 | 4.1:+41304297 | MS.gene09404:CDS |
| CAAATTGAACGTGTGCGTGA+TGG | 0.589798 | 4.1:+41300326 | MS.gene09404:CDS |
| TTGAAAATGAAGGAAGTGGC+TGG | 0.593253 | 4.1:+41304301 | MS.gene09404:CDS |
| AGATCAGATTGTTGATCAGG+AGG | 0.593384 | 4.1:+41304855 | MS.gene09404:CDS |
| TGATCCCAAAGAGGTGGAGT+AGG | 0.595989 | 4.1:-41304922 | None:intergenic |
| CATAAGAGATAATAGGGCTG+GGG | 0.598060 | 4.1:+41303873 | MS.gene09404:CDS |
| TATGCTTAAGAAGGCTGAGA+GGG | 0.600029 | 4.1:+41300433 | MS.gene09404:CDS |
| TAATGACTTGAGACTTGACA+TGG | 0.602099 | 4.1:+41305120 | MS.gene09404:CDS |
| AAGGTCATGCTAACATGGAG+TGG | 0.602708 | 4.1:+41304785 | MS.gene09404:CDS |
| AGACGTGTGTCTAATCTCCT+CGG | 0.602774 | 4.1:+41304709 | MS.gene09404:CDS |
| GATCAGATTGTTGATCAGGA+GGG | 0.602786 | 4.1:+41304856 | MS.gene09404:CDS |
| CAACTGATTCCCTTCTACAT+GGG | 0.607164 | 4.1:-41303959 | None:intergenic |
| CAATCATATGTTGAAAGACA+AGG | 0.607748 | 4.1:+41304766 | MS.gene09404:CDS |
| AGGTCATGCTAACATGGAGT+GGG | 0.609154 | 4.1:+41304786 | MS.gene09404:CDS |
| AGTAGGAGGTGAAGGCAAAG+AGG | 0.610022 | 4.1:-41304905 | None:intergenic |
| GCAGAGAAGTGTTTCTTCTG+GGG | 0.614516 | 4.1:+41300268 | MS.gene09404:CDS |
| ACATGGCTAGATTACAGCAA+AGG | 0.619715 | 4.1:+41305137 | MS.gene09404:CDS |
| GTGAAGTAGTACTTGAACGA+AGG | 0.623546 | 4.1:+41299889 | MS.gene09404:CDS |
| TGAATCTCATGATGGTCATG+AGG | 0.623629 | 4.1:+41300046 | MS.gene09404:CDS |
| GAGCTGGGTGATATAAGTAA+TGG | 0.624327 | 4.1:+41304180 | MS.gene09404:CDS |
| AAATAGCACCGATGAAAGTG+TGG | 0.625113 | 4.1:+41304347 | MS.gene09404:CDS |
| AGTCAGAATGAATCTCATGA+TGG | 0.625222 | 4.1:+41300038 | MS.gene09404:CDS |
| TGAAAACAGTTGGGTCAATG+AGG | 0.628260 | 4.1:+41304407 | MS.gene09404:CDS |
| AGGATGTAGAAAACCCTCAT+CGG | 0.631792 | 4.1:+41304427 | MS.gene09404:CDS |
| TGTGTACCAATTTCAGCACG+TGG | 0.632437 | 4.1:-41300305 | None:intergenic |
| GGATGCTGATCCCAAAGAGG+TGG | 0.632575 | 4.1:-41304928 | None:intergenic |
| TGTGAAAGAAGAGATTGCAC+TGG | 0.632608 | 4.1:+41304033 | MS.gene09404:CDS |
| GTGAAAGAAGAGATTGCACT+GGG | 0.636464 | 4.1:+41304034 | MS.gene09404:CDS |
| ACCTGAATGCGATTGCGATG+GGG | 0.639757 | 4.1:-41300509 | None:intergenic |
| ATGGGAGAAATGGAAGTACT+CGG | 0.642115 | 4.1:+41299793 | MS.gene09404:CDS |
| CACTGGGCAAAATGTTGATG+TGG | 0.643337 | 4.1:+41304050 | MS.gene09404:CDS |
| ATATGCTTAAGAAGGCTGAG+AGG | 0.643545 | 4.1:+41300432 | MS.gene09404:CDS |
| TTTGTCGTTAACCACAGTGA+GGG | 0.653914 | 4.1:+41300350 | MS.gene09404:CDS |
| TCAGAAATACAGCAAATGAG+TGG | 0.656504 | 4.1:+41304382 | MS.gene09404:CDS |
| AGAGCCCAGAGATAGGAGAG+AGG | 0.663049 | 4.1:+41299955 | MS.gene09404:CDS |
| AAAGGATGAATACTATGCAG+AGG | 0.664403 | 4.1:+41305155 | MS.gene09404:CDS |
| TACTATGCAGAGGATGCTTG+AGG | 0.669401 | 4.1:+41305165 | MS.gene09404:CDS |
| GGATATTGAGGATGAACATG+CGG | 0.669856 | 4.1:+41299842 | MS.gene09404:CDS |
| TCGCACGGAAACTACTTCCG+AGG | 0.672959 | 4.1:-41304726 | None:intergenic |
| AGAAGATAGTGGCTTCCAAG+AGG | 0.678702 | 4.1:+41304473 | MS.gene09404:CDS |
| TCAACTGGTCAAGACTCGCA+CGG | 0.680463 | 4.1:-41304741 | None:intergenic |
| TGAGGATGCTGATCCCAAAG+AGG | 0.681681 | 4.1:-41304931 | None:intergenic |
| GAAAACGTGATACAGCCTGA+TGG | 0.688400 | 4.1:-41300487 | None:intergenic |
| ATGTAATTCCTTCTAGACAG+TGG | 0.688413 | 4.1:-41303906 | None:intergenic |
| AAGTTGAAAGGGAAAGAGTG+CGG | 0.701088 | 4.1:+41300111 | MS.gene09404:CDS |
| GACAAAATGAGTATATACGG+AGG | 0.701738 | 4.1:+41300372 | MS.gene09404:CDS |
| TAATAATCAGGTATCCAGTG+AGG | 0.702522 | 4.1:+41304140 | MS.gene09404:CDS |
| TGCGACCAGTTATCACCATG+AGG | 0.712073 | 4.1:-41304949 | None:intergenic |
| CCAGAGATAGGAGAGAGGCG+TGG | 0.717345 | 4.1:+41299960 | MS.gene09404:CDS |
| ATTTGTCGTTAACCACAGTG+AGG | 0.724751 | 4.1:+41300349 | MS.gene09404:CDS |
| AGGAGTATGCGTAAATTACG+CGG | 0.727888 | 4.1:+41300392 | MS.gene09404:CDS |
| CGAAGAAGTGAAATTCCTAG+GGG | 0.738636 | 4.1:+41300176 | MS.gene09404:CDS |
| ACGTATAACCTCCAACACAG+GGG | 0.774720 | 4.1:-41305630 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTAAACTATATTTTAC+TGG | - | chr4.1:41300705-41300724 | None:intergenic | 10.0% |
| !!! | ATCTTTAATTTTAAAATGAT+AGG | - | chr4.1:41304653-41304672 | None:intergenic | 10.0% |
| !!! | GTTTATTTTAGAAAAAAATT+AGG | - | chr4.1:41301605-41301624 | None:intergenic | 10.0% |
| !!! | TATCATTTTAAAATTAAAGA+TGG | + | chr4.1:41304652-41304671 | MS.gene09404:intron | 10.0% |
| !!! | TTTTTTTTTAAACTTATTGA+GGG | + | chr4.1:41302211-41302230 | MS.gene09404:intron | 10.0% |
| !! | AAAAAGTTTCATAAACAATA+AGG | - | chr4.1:41301006-41301025 | None:intergenic | 15.0% |
| !! | AAAAGTTTCATAAACAATAA+GGG | - | chr4.1:41301005-41301024 | None:intergenic | 15.0% |
| !!! | GTTTTTTTTTAAACTTATTG+AGG | + | chr4.1:41302210-41302229 | MS.gene09404:intron | 15.0% |
| !! | AAAGTTTCATAAACAATAAG+GGG | - | chr4.1:41301004-41301023 | None:intergenic | 20.0% |
| !! | AATAGAAACTAATCACTTAT+TGG | - | chr4.1:41300539-41300558 | None:intergenic | 20.0% |
| !! | ATCAAACAAAAGAATCTATT+CGG | - | chr4.1:41301197-41301216 | None:intergenic | 20.0% |
| !! | TACTAACATAAGAGATAATA+GGG | + | chr4.1:41303867-41303886 | MS.gene09404:CDS | 20.0% |
| !! | TTTAATACAAATGAACAAAC+TGG | + | chr4.1:41303814-41303833 | MS.gene09404:CDS | 20.0% |
| !!! | AACTATGTGTTATTTTTCTT+TGG | + | chr4.1:41304999-41305018 | MS.gene09404:intron | 20.0% |
| !!! | ATATTGATTCTTTATTGTAC+AGG | + | chr4.1:41305444-41305463 | MS.gene09404:CDS | 20.0% |
| !!! | TAAAAGTTAGGCTTTAAAAT+GGG | + | chr4.1:41303240-41303259 | MS.gene09404:intron | 20.0% |
| !!! | TGTGAAAAGTGATTTTTATT+TGG | + | chr4.1:41305050-41305069 | MS.gene09404:intron | 20.0% |
| !!! | TTAAAAGTTAGGCTTTAAAA+TGG | + | chr4.1:41303239-41303258 | MS.gene09404:intron | 20.0% |
| ! | AAACTTCATCATAATCAACT+TGG | - | chr4.1:41302732-41302751 | None:intergenic | 25.0% |
| ! | AAATAACACATAGTTACTAG+AGG | - | chr4.1:41304994-41305013 | None:intergenic | 25.0% |
| ! | ACTAGATGACAATTCTAAAT+GGG | + | chr4.1:41305379-41305398 | MS.gene09404:CDS | 25.0% |
| ! | ATAAACAGAACCATTTATTC+TGG | - | chr4.1:41304681-41304700 | None:intergenic | 25.0% |
| ! | ATAAATAAAACAACATGGCT+TGG | - | chr4.1:41301864-41301883 | None:intergenic | 25.0% |
| ! | ATCAAATCAAGGTGATTATA+CGG | + | chr4.1:41304215-41304234 | MS.gene09404:CDS | 25.0% |
| ! | ATCAAATTGAGTACAAAACT+CGG | - | chr4.1:41300746-41300765 | None:intergenic | 25.0% |
| ! | ATCAATATCAATGTTTGATG+AGG | - | chr4.1:41303794-41303813 | None:intergenic | 25.0% |
| ! | ATCCAGCTGAAAAATAAAAA+AGG | + | chr4.1:41303377-41303396 | MS.gene09404:intron | 25.0% |
| ! | ATGATCGTGTATAAAAAATG+AGG | - | chr4.1:41301894-41301913 | None:intergenic | 25.0% |
| ! | CACAAAACAAGTATACAAAA+TGG | - | chr4.1:41303677-41303696 | None:intergenic | 25.0% |
| ! | CTACTAACATAAGAGATAAT+AGG | + | chr4.1:41303866-41303885 | MS.gene09404:CDS | 25.0% |
| ! | CTATTATCTCTTATGTTAGT+AGG | - | chr4.1:41303868-41303887 | None:intergenic | 25.0% |
| ! | GAAAACAATTCATCAAATCA+AGG | + | chr4.1:41304204-41304223 | MS.gene09404:CDS | 25.0% |
| ! | GAACAAATTGTTGAAAATGA+AGG | + | chr4.1:41304291-41304310 | MS.gene09404:CDS | 25.0% |
| ! | GAACATTCTAAGTAGAATTT+AGG | + | chr4.1:41301964-41301983 | MS.gene09404:intron | 25.0% |
| ! | TCACGATAAATAAAACAACA+TGG | - | chr4.1:41301869-41301888 | None:intergenic | 25.0% |
| ! | TCTCTTGAAAAGATAAAATG+CGG | - | chr4.1:41305304-41305323 | None:intergenic | 25.0% |
| ! | TCTCTTTACTTTCATGATAT+TGG | - | chr4.1:41303009-41303028 | None:intergenic | 25.0% |
| ! | TTAGTATTTATGTATGCTGT+TGG | + | chr4.1:41302785-41302804 | MS.gene09404:intron | 25.0% |
| !! | TAAACTATATTTTACTGGAG+TGG | - | chr4.1:41300700-41300719 | None:intergenic | 25.0% |
| !! | TATACCGCTATAACATTTTT+GGG | + | chr4.1:41302870-41302889 | MS.gene09404:intron | 25.0% |
| !! | TTTTATACTGAATGTCAAGA+TGG | + | chr4.1:41300637-41300656 | MS.gene09404:intron | 25.0% |
| !!! | AACTTTTTTGGAAAATAGGT+TGG | - | chr4.1:41303169-41303188 | None:intergenic | 25.0% |
| !!! | ACATTTAGAGCTTATTTTGA+TGG | + | chr4.1:41302699-41302718 | MS.gene09404:intron | 25.0% |
| !!! | ACTGAACTTTTTTGGAAAAT+AGG | - | chr4.1:41303173-41303192 | None:intergenic | 25.0% |
| !!! | AGTTTTGTACGATAGAAATA+AGG | + | chr4.1:41302950-41302969 | MS.gene09404:intron | 25.0% |
| !!! | ATTTTTTAACTGAACTCCTA+TGG | + | chr4.1:41301233-41301252 | MS.gene09404:intron | 25.0% |
| !!! | CATTTAGAGCTTATTTTGAT+GGG | + | chr4.1:41302700-41302719 | MS.gene09404:intron | 25.0% |
| !!! | CTCTTTTTGTTTCATAAAAC+AGG | - | chr4.1:41301682-41301701 | None:intergenic | 25.0% |
| !!! | CTTTTAGAACTTGATTTTGA+TGG | + | chr4.1:41302622-41302641 | MS.gene09404:intron | 25.0% |
| !!! | TATGTGTTATTTTTCTTTGG+TGG | + | chr4.1:41305002-41305021 | MS.gene09404:intron | 25.0% |
| !!! | TTCCTTTTTTATTTTTCAGC+TGG | - | chr4.1:41303382-41303401 | None:intergenic | 25.0% |
| AAAATGTTATAGCGGTATAG+CGG | - | chr4.1:41302869-41302888 | None:intergenic | 30.0% | |
| AAACAAAGAGCTAATGTCAT+TGG | - | chr4.1:41303700-41303719 | None:intergenic | 30.0% | |
| AAACCCCAAAAATGTTATAG+CGG | - | chr4.1:41302877-41302896 | None:intergenic | 30.0% | |
| AAAGTGAATTAGGCTTATTG+AGG | + | chr4.1:41300860-41300879 | MS.gene09404:CDS | 30.0% | |
| AACAAGTATACAAAATGGAG+TGG | - | chr4.1:41303672-41303691 | None:intergenic | 30.0% | |
| AAGATGGTATCCAGAATAAA+TGG | + | chr4.1:41304668-41304687 | MS.gene09404:intron | 30.0% | |
| AATCTATTCGGTTAAGTTAG+GGG | - | chr4.1:41301185-41301204 | None:intergenic | 30.0% | |
| ACAGAAAAACACTCAAGTAA+AGG | - | chr4.1:41302762-41302781 | None:intergenic | 30.0% | |
| AGAATCTATTCGGTTAAGTT+AGG | - | chr4.1:41301187-41301206 | None:intergenic | 30.0% | |
| AGACTAAAATCCATGTACAA+AGG | - | chr4.1:41302822-41302841 | None:intergenic | 30.0% | |
| AGGAACTGATGTTAAAAGTT+AGG | + | chr4.1:41303228-41303247 | MS.gene09404:intron | 30.0% | |
| AGGGACAAAATGAGTATATA+CGG | + | chr4.1:41300369-41300388 | MS.gene09404:CDS | 30.0% | |
| AGTCGGTGATTATAATAATC+CGG | - | chr4.1:41305512-41305531 | None:intergenic | 30.0% | |
| ATGTATACAATGTTGAACTC+AGG | + | chr4.1:41304583-41304602 | MS.gene09404:CDS | 30.0% | |
| ATTATCATCCACACTTTCAT+CGG | - | chr4.1:41304358-41304377 | None:intergenic | 30.0% | |
| ATTGTTGAAAATGAAGGAAG+TGG | + | chr4.1:41304297-41304316 | MS.gene09404:CDS | 30.0% | |
| ATTTATGTTCCCTTTGTACA+TGG | + | chr4.1:41302809-41302828 | MS.gene09404:intron | 30.0% | |
| CAACATATGATTGTATCAAC+TGG | - | chr4.1:41304759-41304778 | None:intergenic | 30.0% | |
| CAATCATATGTTGAAAGACA+AGG | + | chr4.1:41304766-41304785 | MS.gene09404:CDS | 30.0% | |
| CACTAGATGACAATTCTAAA+TGG | + | chr4.1:41305378-41305397 | MS.gene09404:CDS | 30.0% | |
| CAGAAAAACACTCAAGTAAA+GGG | - | chr4.1:41302761-41302780 | None:intergenic | 30.0% | |
| GAATCTATTCGGTTAAGTTA+GGG | - | chr4.1:41301186-41301205 | None:intergenic | 30.0% | |
| GACGAATGTGGATAAAAATT+GGG | - | chr4.1:41301838-41301857 | None:intergenic | 30.0% | |
| GACTAAAATCCATGTACAAA+GGG | - | chr4.1:41302821-41302840 | None:intergenic | 30.0% | |
| GAGTTCATTCTTAGCAAATT+GGG | + | chr4.1:41301394-41301413 | MS.gene09404:intron | 30.0% | |
| TAACTATGAACTCTACTACT+TGG | - | chr4.1:41304543-41304562 | None:intergenic | 30.0% | |
| TACTTGAACGAAGGAATAAT+GGG | + | chr4.1:41299898-41299917 | MS.gene09404:CDS | 30.0% | |
| TATGCTTGATATGCTTAAGA+AGG | + | chr4.1:41300424-41300443 | MS.gene09404:CDS | 30.0% | |
| TCAAATTGAGTACAAAACTC+GGG | - | chr4.1:41300745-41300764 | None:intergenic | 30.0% | |
| TGAGTTCATTCTTAGCAAAT+TGG | + | chr4.1:41301393-41301412 | MS.gene09404:intron | 30.0% | |
| TGGCTACAATTGTTTGATTA+GGG | - | chr4.1:41301737-41301756 | None:intergenic | 30.0% | |
| TGTATACAATGTTGAACTCA+GGG | + | chr4.1:41304584-41304603 | MS.gene09404:CDS | 30.0% | |
| TTCAGAGCATAGTAATAATC+AGG | + | chr4.1:41304128-41304147 | MS.gene09404:CDS | 30.0% | |
| TTCCTGGGATAAATTTAACT+CGG | - | chr4.1:41305343-41305362 | None:intergenic | 30.0% | |
| TTGGCTACAATTGTTTGATT+AGG | - | chr4.1:41301738-41301757 | None:intergenic | 30.0% | |
| TTGTATACATTGTCATCATC+AGG | - | chr4.1:41304573-41304592 | None:intergenic | 30.0% | |
| TTTCATAAACAATAAGGGGA+CGG | - | chr4.1:41301000-41301019 | None:intergenic | 30.0% | |
| ! | ATACCGCTATAACATTTTTG+GGG | + | chr4.1:41302871-41302890 | MS.gene09404:intron | 30.0% |
| ! | ATATTTGTTTGCTGACATAG+TGG | + | chr4.1:41301340-41301359 | MS.gene09404:intron | 30.0% |
| ! | ATGACTGCTATTGCAATTTT+GGG | + | chr4.1:41302157-41302176 | MS.gene09404:intron | 30.0% |
| ! | ATTAGCTCTTTGTTTGAACA+GGG | + | chr4.1:41303705-41303724 | MS.gene09404:intron | 30.0% |
| ! | CTATACCGCTATAACATTTT+TGG | + | chr4.1:41302869-41302888 | MS.gene09404:intron | 30.0% |
| ! | GATTTTCCTATTTCCTCTTT+TGG | - | chr4.1:41301757-41301776 | None:intergenic | 30.0% |
| ! | TAAACACGGGTTACAATATT+AGG | - | chr4.1:41302267-41302286 | None:intergenic | 30.0% |
| ! | TAAACTTATTGAGGGTATAG+TGG | + | chr4.1:41302219-41302238 | MS.gene09404:intron | 30.0% |
| ! | TAACTTTTAACATCAGTTCC+TGG | - | chr4.1:41303229-41303248 | None:intergenic | 30.0% |
| ! | TGTGAAAACTCTTCTGTTTT+CGG | + | chr4.1:41300086-41300105 | MS.gene09404:CDS | 30.0% |
| ! | TTGCTTATGTCTTTTTCTGA+CGG | + | chr4.1:41302578-41302597 | MS.gene09404:intron | 30.0% |
| ! | TTTTAACATATACTGCATGC+TGG | - | chr4.1:41301527-41301546 | None:intergenic | 30.0% |
| !! | AATGTTGTTGATGATGTGAA+TGG | + | chr4.1:41304243-41304262 | MS.gene09404:CDS | 30.0% |
| !! | GATTTTAGTCTTCACAATAG+AGG | + | chr4.1:41302831-41302850 | MS.gene09404:intron | 30.0% |
| !! | TGTTTTATGCTGTTTGACTT+GGG | + | chr4.1:41303418-41303437 | MS.gene09404:intron | 30.0% |
| !! | TTGTTTTATGCTGTTTGACT+TGG | + | chr4.1:41303417-41303436 | MS.gene09404:intron | 30.0% |
| !!! | GTTCAGTAACTGAACTTTTT+TGG | - | chr4.1:41303181-41303200 | None:intergenic | 30.0% |
| AAAGCAGCCACAATTAAACA+CGG | - | chr4.1:41302281-41302300 | None:intergenic | 35.0% | |
| AAAGGATGAATACTATGCAG+AGG | + | chr4.1:41305155-41305174 | MS.gene09404:CDS | 35.0% | |
| AAATGGGAATGTGTGAGAAA+AGG | + | chr4.1:41305395-41305414 | MS.gene09404:CDS | 35.0% | |
| AACACTTACCTTTCTGAGTT+TGG | - | chr4.1:41301921-41301940 | None:intergenic | 35.0% | |
| AACATAAGAGATAATAGGGC+TGG | + | chr4.1:41303871-41303890 | MS.gene09404:CDS | 35.0% | |
| AACCGAGTTAAATTTATCCC+AGG | + | chr4.1:41305338-41305357 | MS.gene09404:intron | 35.0% | |
| AAGTAAAGAGATGCAACAGT+TGG | + | chr4.1:41303018-41303037 | MS.gene09404:intron | 35.0% | |
| AATAATTTCCAAATCCTGCC+AGG | - | chr4.1:41305101-41305120 | None:intergenic | 35.0% | |
| AATGTCAAGATGGAAAACCT+AGG | + | chr4.1:41300647-41300666 | MS.gene09404:intron | 35.0% | |
| ACAGTTGGAATTAGGAGATA+TGG | + | chr4.1:41303033-41303052 | MS.gene09404:intron | 35.0% | |
| ACATAAGAGATAATAGGGCT+GGG | + | chr4.1:41303872-41303891 | MS.gene09404:CDS | 35.0% | |
| ACATCCATCAAAATGTTTGC+AGG | + | chr4.1:41300768-41300787 | MS.gene09404:intron | 35.0% | |
| ACGAACAGAAACAGAAAAGA+AGG | - | chr4.1:41302480-41302499 | None:intergenic | 35.0% | |
| AGTCAGAATGAATCTCATGA+TGG | + | chr4.1:41300038-41300057 | MS.gene09404:CDS | 35.0% | |
| AGTTGGAATTAGGAGATATG+GGG | + | chr4.1:41303035-41303054 | MS.gene09404:intron | 35.0% | |
| ATGAGAGCAAGGCAATATAA+CGG | - | chr4.1:41302327-41302346 | None:intergenic | 35.0% | |
| ATGAGTTGCTTCAAAGTAGA+AGG | + | chr4.1:41305588-41305607 | MS.gene09404:CDS | 35.0% | |
| ATGTAATTCCTTCTAGACAG+TGG | - | chr4.1:41303909-41303928 | None:intergenic | 35.0% | |
| CAAACAATTGTAGCCAAAAG+AGG | + | chr4.1:41301741-41301760 | MS.gene09404:intron | 35.0% | |
| CAGACGTTTCAAACAGAAAA+TGG | - | chr4.1:41305476-41305495 | None:intergenic | 35.0% | |
| CAGTTGGAATTAGGAGATAT+GGG | + | chr4.1:41303034-41303053 | MS.gene09404:intron | 35.0% | |
| CGACGAATGTGGATAAAAAT+TGG | - | chr4.1:41301839-41301858 | None:intergenic | 35.0% | |
| GAACTCAAACAGAAACAGAA+TGG | - | chr4.1:41302429-41302448 | None:intergenic | 35.0% | |
| GACAAAATGAGTATATACGG+AGG | + | chr4.1:41300372-41300391 | MS.gene09404:CDS | 35.0% | |
| GTACTTGAACGAAGGAATAA+TGG | + | chr4.1:41299897-41299916 | MS.gene09404:CDS | 35.0% | |
| GTGTCCAAATTGAAGAATGT+CGG | + | chr4.1:41303124-41303143 | MS.gene09404:intron | 35.0% | |
| TAAAAATGTGTGTTCAGTCC+AGG | + | chr4.1:41303208-41303227 | MS.gene09404:intron | 35.0% | |
| TAACACATAGTTACTAGAGG+CGG | - | chr4.1:41304991-41305010 | None:intergenic | 35.0% | |
| TAATAATCAGGTATCCAGTG+AGG | + | chr4.1:41304140-41304159 | MS.gene09404:CDS | 35.0% | |
| TAATGACTTGAGACTTGACA+TGG | + | chr4.1:41305120-41305139 | MS.gene09404:CDS | 35.0% | |
| TAGTGTGATATAGTGTAGTG+TGG | + | chr4.1:41302005-41302024 | MS.gene09404:intron | 35.0% | |
| TATTCGCAGTTGAATGAAAC+TGG | + | chr4.1:41303488-41303507 | MS.gene09404:intron | 35.0% | |
| TCAAACAGAAACAGAATGGA+AGG | - | chr4.1:41302425-41302444 | None:intergenic | 35.0% | |
| TCAAGATCAGATTGTTGATC+AGG | + | chr4.1:41304852-41304871 | MS.gene09404:CDS | 35.0% | |
| TCAGAAATACAGCAAATGAG+TGG | + | chr4.1:41304382-41304401 | MS.gene09404:CDS | 35.0% | |
| TCTGTAGCAGAAAGTGAATT+AGG | + | chr4.1:41300850-41300869 | MS.gene09404:CDS | 35.0% | |
| TGAACCGACATTCTTCAATT+TGG | - | chr4.1:41303131-41303150 | None:intergenic | 35.0% | |
| TGATTTCTTTACCCTTCATC+AGG | + | chr4.1:41305277-41305296 | MS.gene09404:intron | 35.0% | |
| TGCCAAGAAATGGGAAAAAA+AGG | + | chr4.1:41301442-41301461 | MS.gene09404:intron | 35.0% | |
| TGGGAAAAAAAGGCTTCAAA+AGG | + | chr4.1:41301452-41301471 | MS.gene09404:intron | 35.0% | |
| TTCATAAACAATAAGGGGAC+GGG | - | chr4.1:41300999-41301018 | None:intergenic | 35.0% | |
| TTCATAGTAAGATCCCTATG+TGG | - | chr4.1:41302928-41302947 | None:intergenic | 35.0% | |
| TTGTAACCCGTGTTTAATTG+TGG | + | chr4.1:41302271-41302290 | MS.gene09404:intron | 35.0% | |
| TTGTAGCCAAAAGAGGAAAT+AGG | + | chr4.1:41301748-41301767 | MS.gene09404:intron | 35.0% | |
| TTTGCACAGAAATAGAGCAA+AGG | - | chr4.1:41302390-41302409 | None:intergenic | 35.0% | |
| ! | AATGCCTGCAAACATTTTGA+TGG | - | chr4.1:41300775-41300794 | None:intergenic | 35.0% |
| ! | AATGGTTCTGTTTATCTTGC+AGG | + | chr4.1:41304686-41304705 | MS.gene09404:intron | 35.0% |
| ! | AGCTTGGTCGGAATATTTTA+GGG | + | chr4.1:41301266-41301285 | MS.gene09404:intron | 35.0% |
| ! | CATCAGTTTGTAAGCTTTGT+TGG | - | chr4.1:41304107-41304126 | None:intergenic | 35.0% |
| ! | CATCTACAACAAAAGCACAA+TGG | - | chr4.1:41305536-41305555 | None:intergenic | 35.0% |
| ! | CATCTTCTCTTTTGCAAATG+TGG | + | chr4.1:41299817-41299836 | MS.gene09404:CDS | 35.0% |
| ! | CATTAGCTCTTTGTTTGAAC+AGG | + | chr4.1:41303704-41303723 | MS.gene09404:intron | 35.0% |
| ! | CCACATTTTTGCCAAGAAAT+GGG | + | chr4.1:41301433-41301452 | MS.gene09404:intron | 35.0% |
| ! | CTGTTTGAGTTCTTCTTTCT+TGG | + | chr4.1:41302437-41302456 | MS.gene09404:intron | 35.0% |
| ! | GATGACTGCTATTGCAATTT+TGG | + | chr4.1:41302156-41302175 | MS.gene09404:intron | 35.0% |
| ! | TATCTGAGATTGACCACATA+GGG | + | chr4.1:41302912-41302931 | MS.gene09404:intron | 35.0% |
| ! | TCCACATTTTTGCCAAGAAA+TGG | + | chr4.1:41301432-41301451 | MS.gene09404:intron | 35.0% |
| ! | TGACTGCTATTGCAATTTTG+GGG | + | chr4.1:41302158-41302177 | MS.gene09404:intron | 35.0% |
| ! | TGCTTATGTCTTTTTCTGAC+GGG | + | chr4.1:41302579-41302598 | MS.gene09404:intron | 35.0% |
| ! | TGTTTGATGAGGTATCAGAT+AGG | - | chr4.1:41303783-41303802 | None:intergenic | 35.0% |
| ! | TGTTTTCGGAGAAGTTGAAA+GGG | + | chr4.1:41300100-41300119 | MS.gene09404:CDS | 35.0% |
| ! | TTCAGTTTTGCATATGCCTT+GGG | - | chr4.1:41301654-41301673 | None:intergenic | 35.0% |
| !! | AGTTGAATGAAACTGGTTTG+AGG | + | chr4.1:41303495-41303514 | MS.gene09404:intron | 35.0% |
| !! | GGAAGCATGATTTTGATCAA+TGG | + | chr4.1:41302529-41302548 | MS.gene09404:intron | 35.0% |
| !! | GTTGAATGAAACTGGTTTGA+GGG | + | chr4.1:41303496-41303515 | MS.gene09404:intron | 35.0% |
| !! | TCTACTTTGAAGCAACTCAT+TGG | - | chr4.1:41305588-41305607 | None:intergenic | 35.0% |
| !! | TTGTGCTTTTGTTGTAGATG+TGG | + | chr4.1:41305536-41305555 | MS.gene09404:intron | 35.0% |
| !! | TTTGCTCTATTTCTGTGCAA+AGG | + | chr4.1:41302389-41302408 | MS.gene09404:intron | 35.0% |
| !!! | AGCCTTTTTTTCCCATTTCT+TGG | - | chr4.1:41301447-41301466 | None:intergenic | 35.0% |
| !!! | GCTATAACATTTTTGGGGTT+TGG | + | chr4.1:41302876-41302895 | MS.gene09404:intron | 35.0% |
| !!! | TGTTCGTGTTTTGTTTTCTG+AGG | + | chr4.1:41302493-41302512 | MS.gene09404:intron | 35.0% |
| !!! | TTTTGCAACGTATTGGTTCA+GGG | - | chr4.1:41301485-41301504 | None:intergenic | 35.0% |
| AAATTCCCACTGCATTCAGA+TGG | + | chr4.1:41303548-41303567 | MS.gene09404:intron | 40.0% | |
| AACTCAGGGAACTTCATAGT+AGG | + | chr4.1:41304598-41304617 | MS.gene09404:CDS | 40.0% | |
| AAGACAAGGTCATGCTAACA+TGG | + | chr4.1:41304780-41304799 | MS.gene09404:CDS | 40.0% | |
| AAGCAGCCACAATTAAACAC+GGG | - | chr4.1:41302280-41302299 | None:intergenic | 40.0% | |
| AAGTCTGTTTCGCATTACCT+AGG | - | chr4.1:41300667-41300686 | None:intergenic | 40.0% | |
| AAGTTGAAAGGGAAAGAGTG+CGG | + | chr4.1:41300111-41300130 | MS.gene09404:CDS | 40.0% | |
| AATCTACTGCCCATGTAGAA+GGG | + | chr4.1:41303950-41303969 | MS.gene09404:CDS | 40.0% | |
| ACAAAAAGCCCGTTGTTGTA+AGG | - | chr4.1:41303456-41303475 | None:intergenic | 40.0% | |
| ACAGATCTGTTGACCATAAC+AGG | + | chr4.1:41300821-41300840 | MS.gene09404:CDS | 40.0% | |
| ACATAATGAGCAATCTGAGC+TGG | + | chr4.1:41304164-41304183 | MS.gene09404:CDS | 40.0% | |
| ACATGGCTAGATTACAGCAA+AGG | + | chr4.1:41305137-41305156 | MS.gene09404:CDS | 40.0% | |
| ACGAATTGCCTTACAACAAC+GGG | + | chr4.1:41303445-41303464 | MS.gene09404:intron | 40.0% | |
| AGAGCAAAGGAGTAAAACGA+AGG | - | chr4.1:41302377-41302396 | None:intergenic | 40.0% | |
| AGATCAGATTGTTGATCAGG+AGG | + | chr4.1:41304855-41304874 | MS.gene09404:CDS | 40.0% | |
| AGGAAAGGGTGAGAGTTATA+AGG | + | chr4.1:41300222-41300241 | MS.gene09404:CDS | 40.0% | |
| AGGATGTAGAAAACCCTCAT+CGG | + | chr4.1:41304427-41304446 | MS.gene09404:CDS | 40.0% | |
| AGGCAAAGACAAACTGTATC+AGG | + | chr4.1:41300880-41300899 | MS.gene09404:CDS | 40.0% | |
| ATAAAATGCGGACCTGATGA+AGG | - | chr4.1:41305292-41305311 | None:intergenic | 40.0% | |
| ATATGCTTAAGAAGGCTGAG+AGG | + | chr4.1:41300432-41300451 | MS.gene09404:CDS | 40.0% | |
| ATCCTGAACATGTGCACAAA+TGG | - | chr4.1:41305562-41305581 | None:intergenic | 40.0% | |
| ATTTGTCGTTAACCACAGTG+AGG | + | chr4.1:41300349-41300368 | MS.gene09404:CDS | 40.0% | |
| CACGAATTGCCTTACAACAA+CGG | + | chr4.1:41303444-41303463 | MS.gene09404:intron | 40.0% | |
| CATAAGAGATAATAGGGCTG+GGG | + | chr4.1:41303873-41303892 | MS.gene09404:CDS | 40.0% | |
| CATAATGAGCAATCTGAGCT+GGG | + | chr4.1:41304165-41304184 | MS.gene09404:CDS | 40.0% | |
| CCCATTTCTTGGCAAAAATG+TGG | - | chr4.1:41301436-41301455 | None:intergenic | 40.0% | |
| CCCTAGGAATTTCACTTCTT+CGG | - | chr4.1:41300178-41300197 | None:intergenic | 40.0% | |
| CCGAAGAAGTGAAATTCCTA+GGG | + | chr4.1:41300175-41300194 | MS.gene09404:CDS | 40.0% | |
| CCTAGGAATTTCACTTCTTC+GGG | - | chr4.1:41300177-41300196 | None:intergenic | 40.0% | |
| CGAAGAAGTGAAATTCCTAG+GGG | + | chr4.1:41300176-41300195 | MS.gene09404:CDS | 40.0% | |
| GAACCAATACGTTGCAAAAG+CGG | + | chr4.1:41301486-41301505 | MS.gene09404:intron | 40.0% | |
| GAAGAACTCAAATGAGAGCA+AGG | - | chr4.1:41302338-41302357 | None:intergenic | 40.0% | |
| GAAGTTTGGCAAGAAGATAG+TGG | + | chr4.1:41304462-41304481 | MS.gene09404:CDS | 40.0% | |
| GACAAACTGTATCAGGTCTA+AGG | + | chr4.1:41300887-41300906 | MS.gene09404:CDS | 40.0% | |
| GAGATGCAACAGTTGGAATT+AGG | + | chr4.1:41303025-41303044 | MS.gene09404:intron | 40.0% | |
| GAGCTGGGTGATATAAGTAA+TGG | + | chr4.1:41304180-41304199 | MS.gene09404:CDS | 40.0% | |
| GATCAGATTGTTGATCAGGA+GGG | + | chr4.1:41304856-41304875 | MS.gene09404:CDS | 40.0% | |
| GGAAAGGGTGAGAGTTATAA+GGG | + | chr4.1:41300223-41300242 | MS.gene09404:CDS | 40.0% | |
| GGATATTGAGGATGAACATG+CGG | + | chr4.1:41299842-41299861 | MS.gene09404:CDS | 40.0% | |
| GGTGAGAGTTATAAGGGAAT+GGG | + | chr4.1:41300229-41300248 | MS.gene09404:CDS | 40.0% | |
| GTAGGTGAAATGTGAGAGAA+AGG | + | chr4.1:41303068-41303087 | MS.gene09404:intron | 40.0% | |
| GTGAAAGAAGAGATTGCACT+GGG | + | chr4.1:41304034-41304053 | MS.gene09404:CDS | 40.0% | |
| GTGAAGTAGTACTTGAACGA+AGG | + | chr4.1:41299889-41299908 | MS.gene09404:CDS | 40.0% | |
| TAAAATGCGGACCTGATGAA+GGG | - | chr4.1:41305291-41305310 | None:intergenic | 40.0% | |
| TACGTATAACCTCCAACACA+GGG | - | chr4.1:41305634-41305653 | None:intergenic | 40.0% | |
| TACTACTTGGAGCAGTTTCA+TGG | - | chr4.1:41304530-41304549 | None:intergenic | 40.0% | |
| TATGCTTAAGAAGGCTGAGA+GGG | + | chr4.1:41300433-41300452 | MS.gene09404:CDS | 40.0% | |
| TCATCGAACCAAACTCAGAA+AGG | + | chr4.1:41301910-41301929 | MS.gene09404:intron | 40.0% | |
| TGAAAACAGTTGGGTCAATG+AGG | + | chr4.1:41304407-41304426 | MS.gene09404:CDS | 40.0% | |
| TGAATCTCATGATGGTCATG+AGG | + | chr4.1:41300046-41300065 | MS.gene09404:CDS | 40.0% | |
| TGGAGAAAGCAGTTCTTGTA+TGG | + | chr4.1:41303834-41303853 | MS.gene09404:CDS | 40.0% | |
| TGTGAAAGAAGAGATTGCAC+TGG | + | chr4.1:41304033-41304052 | MS.gene09404:CDS | 40.0% | |
| TGTGATATAGTGTAGTGTGG+CGG | + | chr4.1:41302008-41302027 | MS.gene09404:intron | 40.0% | |
| TTATCATCCACACTTTCTCC+TGG | + | chr4.1:41305080-41305099 | MS.gene09404:intron | 40.0% | |
| TTATGATACATCGTGTGTGC+AGG | + | chr4.1:41301056-41301075 | MS.gene09404:intron | 40.0% | |
| TTCACTTTCTGCTACAGATG+TGG | - | chr4.1:41300848-41300867 | None:intergenic | 40.0% | |
| TTCAGGGAATGGATGAATAC+TGG | + | chr4.1:41300140-41300159 | MS.gene09404:CDS | 40.0% | |
| TTGAAAATGAAGGAAGTGGC+TGG | + | chr4.1:41304301-41304320 | MS.gene09404:CDS | 40.0% | |
| TTGATCCATCTGAATGCAGT+GGG | - | chr4.1:41303556-41303575 | None:intergenic | 40.0% | |
| TTGCTCATTATGTACCTCAC+TGG | - | chr4.1:41304157-41304176 | None:intergenic | 40.0% | |
| TTTGATCCATCTGAATGCAG+TGG | - | chr4.1:41303557-41303576 | None:intergenic | 40.0% | |
| TTTGTCGTTAACCACAGTGA+GGG | + | chr4.1:41300350-41300369 | MS.gene09404:CDS | 40.0% | |
| ! | AACAAAAGCACAATGGCAGT+CGG | - | chr4.1:41305529-41305548 | None:intergenic | 40.0% |
| ! | AGGAGTATGCGTAAATTACG+CGG | + | chr4.1:41300392-41300411 | MS.gene09404:CDS | 40.0% |
| ! | CAACTGATTCCCTTCTACAT+GGG | - | chr4.1:41303962-41303981 | None:intergenic | 40.0% |
| ! | CTATCTGAGATTGACCACAT+AGG | + | chr4.1:41302911-41302930 | MS.gene09404:intron | 40.0% |
| ! | CTGTTTTCGGAGAAGTTGAA+AGG | + | chr4.1:41300099-41300118 | MS.gene09404:CDS | 40.0% |
| ! | CTTCTCTTTTGCAAATGTGG+CGG | + | chr4.1:41299820-41299839 | MS.gene09404:CDS | 40.0% |
| ! | GACTGCTATTGCAATTTTGG+GGG | + | chr4.1:41302159-41302178 | MS.gene09404:intron | 40.0% |
| ! | GAGCTTGGTCGGAATATTTT+AGG | + | chr4.1:41301265-41301284 | MS.gene09404:intron | 40.0% |
| ! | GGTTTGGAAGACACAGTTTT+GGG | + | chr4.1:41299981-41300000 | MS.gene09404:CDS | 40.0% |
| ! | GTCCACATGCTCATTTTCTA+GGG | + | chr4.1:41303333-41303352 | MS.gene09404:intron | 40.0% |
| ! | GTTCAGTTTTGCATATGCCT+TGG | - | chr4.1:41301655-41301674 | None:intergenic | 40.0% |
| ! | TCATTGACCCAACTGTTTTC+AGG | - | chr4.1:41304408-41304427 | None:intergenic | 40.0% |
| ! | TCCTCCTAACCAATTTTCCA+CGG | - | chr4.1:41304499-41304518 | None:intergenic | 40.0% |
| ! | TGTCCACATGCTCATTTTCT+AGG | + | chr4.1:41303332-41303351 | MS.gene09404:intron | 40.0% |
| ! | TGTTTCTTCTGGGGAAAACA+GGG | + | chr4.1:41300277-41300296 | MS.gene09404:CDS | 40.0% |
| ! | TTCTCTTTTGCAAATGTGGC+GGG | + | chr4.1:41299821-41299840 | MS.gene09404:CDS | 40.0% |
| !! | AAATAGCACCGATGAAAGTG+TGG | + | chr4.1:41304347-41304366 | MS.gene09404:CDS | 40.0% |
| !! | AAGGAATAATGGGTCGATTG+CGG | + | chr4.1:41299908-41299927 | MS.gene09404:CDS | 40.0% |
| !! | ACAACAACGGGCTTTTTGTT+GGG | + | chr4.1:41303457-41303476 | MS.gene09404:intron | 40.0% |
| !! | AGCAGAGAAGTGTTTCTTCT+GGG | + | chr4.1:41300267-41300286 | MS.gene09404:CDS | 40.0% |
| !! | ATGGGAGAAATGGAAGTACT+CGG | + | chr4.1:41299793-41299812 | MS.gene09404:CDS | 40.0% |
| !! | GCTTGGTCGGAATATTTTAG+GGG | + | chr4.1:41301267-41301286 | MS.gene09404:intron | 40.0% |
| !! | GTTGATGATGTGAATGGATC+TGG | + | chr4.1:41304249-41304268 | MS.gene09404:CDS | 40.0% |
| !! | TACAACAACGGGCTTTTTGT+TGG | + | chr4.1:41303456-41303475 | MS.gene09404:intron | 40.0% |
| !! | TGGTTTGGAAGACACAGTTT+TGG | + | chr4.1:41299980-41299999 | MS.gene09404:CDS | 40.0% |
| !!! | CTTTTGCAACGTATTGGTTC+AGG | - | chr4.1:41301486-41301505 | None:intergenic | 40.0% |
| !!! | GCTAGACTCGTCTTTTTTGA+GGG | + | chr4.1:41299737-41299756 | MS.gene09404:CDS | 40.0% |
| !!! | TCGTGTTTTGTTTTCTGAGG+TGG | + | chr4.1:41302496-41302515 | MS.gene09404:intron | 40.0% |
| !!! | TGCTAGACTCGTCTTTTTTG+AGG | + | chr4.1:41299736-41299755 | MS.gene09404:CDS | 40.0% |
| AAACCTGAATGCGATTGCGA+TGG | - | chr4.1:41300514-41300533 | None:intergenic | 45.0% | |
| AACCTGAATGCGATTGCGAT+GGG | - | chr4.1:41300513-41300532 | None:intergenic | 45.0% | |
| AACTCTCACCCTTTCCTGTT+CGG | - | chr4.1:41300219-41300238 | None:intergenic | 45.0% | |
| AACTGAACTCCTATGGTCAG+TGG | + | chr4.1:41301240-41301259 | MS.gene09404:intron | 45.0% | |
| AAGGTCATGCTAACATGGAG+TGG | + | chr4.1:41304785-41304804 | MS.gene09404:CDS | 45.0% | |
| AATCGCACTCACGTATTCCT+GGG | - | chr4.1:41305358-41305377 | None:intergenic | 45.0% | |
| AATTAGGAGATATGGGGCGT+AGG | + | chr4.1:41303041-41303060 | MS.gene09404:intron | 45.0% | |
| ACGTATAACCTCCAACACAG+GGG | - | chr4.1:41305633-41305652 | None:intergenic | 45.0% | |
| AGACGTGTGTCTAATCTCCT+CGG | + | chr4.1:41304709-41304728 | MS.gene09404:CDS | 45.0% | |
| AGCATCCTCATGGTGATAAC+TGG | + | chr4.1:41304944-41304963 | MS.gene09404:CDS | 45.0% | |
| AGGCAGTCATCATTCAGTGA+TGG | + | chr4.1:41304009-41304028 | MS.gene09404:CDS | 45.0% | |
| AGGTCATGCTAACATGGAGT+GGG | + | chr4.1:41304786-41304805 | MS.gene09404:CDS | 45.0% | |
| AGTCATGTTCAAGGAAGAGC+TGG | + | chr4.1:41299867-41299886 | MS.gene09404:CDS | 45.0% | |
| ATGAGTGGCCTGAAAACAGT+TGG | + | chr4.1:41304397-41304416 | MS.gene09404:CDS | 45.0% | |
| ATTAGGAGATATGGGGCGTA+GGG | + | chr4.1:41303042-41303061 | MS.gene09404:intron | 45.0% | |
| CAAATTGAACGTGTGCGTGA+TGG | + | chr4.1:41300326-41300345 | MS.gene09404:CDS | 45.0% | |
| CACGACTGATGGTAAACAGA+TGG | - | chr4.1:41300587-41300606 | None:intergenic | 45.0% | |
| CACTGGGCAAAATGTTGATG+TGG | + | chr4.1:41304050-41304069 | MS.gene09404:CDS | 45.0% | |
| CAGAAGAAACACTTCTCTGC+TGG | - | chr4.1:41300268-41300287 | None:intergenic | 45.0% | |
| CCCGAAGAAGTGAAATTCCT+AGG | + | chr4.1:41300174-41300193 | MS.gene09404:CDS | 45.0% | |
| CGCTTTGCAAGACTATGACA+TGG | - | chr4.1:41302049-41302068 | None:intergenic | 45.0% | |
| CTACAGATGTGGACCTGTTA+TGG | - | chr4.1:41300837-41300856 | None:intergenic | 45.0% | |
| CTATTCGGTTAAGTTAGGGG+TGG | - | chr4.1:41301182-41301201 | None:intergenic | 45.0% | |
| GAAAACGTGATACAGCCTGA+TGG | - | chr4.1:41300490-41300509 | None:intergenic | 45.0% | |
| GAATCTACTGCCCATGTAGA+AGG | + | chr4.1:41303949-41303968 | MS.gene09404:CDS | 45.0% | |
| GACCCTAGAAAATGAGCATG+TGG | - | chr4.1:41303338-41303357 | None:intergenic | 45.0% | |
| GAGAGAAATTCACGAGTTGC+TGG | + | chr4.1:41300463-41300482 | MS.gene09404:CDS | 45.0% | |
| GCAATAGCGGCAACAATTTG+CGG | + | chr4.1:41302084-41302103 | MS.gene09404:intron | 45.0% | |
| GCTATTGCTGCTACTCTCAA+CGG | - | chr4.1:41302072-41302091 | None:intergenic | 45.0% | |
| GCTGACATAGTGGTTATTGC+TGG | + | chr4.1:41301350-41301369 | MS.gene09404:intron | 45.0% | |
| GGAAGGATTCTTCTCCAGAA+TGG | + | chr4.1:41303726-41303745 | MS.gene09404:CDS | 45.0% | |
| GGCAAAAATGTGGAACACGA+GGG | - | chr4.1:41301426-41301445 | None:intergenic | 45.0% | |
| GGCAGTCATCATTCAGTGAT+GGG | + | chr4.1:41304010-41304029 | MS.gene09404:CDS | 45.0% | |
| GGCATCAGAGTAACACTGAA+TGG | + | chr4.1:41304322-41304341 | MS.gene09404:CDS | 45.0% | |
| GGGTGAGAGTTATAAGGGAA+TGG | + | chr4.1:41300228-41300247 | MS.gene09404:CDS | 45.0% | |
| GTACGTATAACCTCCAACAC+AGG | - | chr4.1:41305635-41305654 | None:intergenic | 45.0% | |
| GTACTGTCTTACACGACTGA+TGG | - | chr4.1:41300598-41300617 | None:intergenic | 45.0% | |
| GTTGAGAGTAGCAGCAATAG+CGG | + | chr4.1:41302071-41302090 | MS.gene09404:intron | 45.0% | |
| TACTATGCAGAGGATGCTTG+AGG | + | chr4.1:41305165-41305184 | MS.gene09404:CDS | 45.0% | |
| TCAAACCACACTACAGTAGC+AGG | - | chr4.1:41302138-41302157 | None:intergenic | 45.0% | |
| TCAATCCTGCTACTGTAGTG+TGG | + | chr4.1:41302130-41302149 | MS.gene09404:intron | 45.0% | |
| TGAGTGGCCTGAAAACAGTT+GGG | + | chr4.1:41304398-41304417 | MS.gene09404:CDS | 45.0% | |
| TGGAGAAACCGAACAGGAAA+GGG | + | chr4.1:41300208-41300227 | MS.gene09404:CDS | 45.0% | |
| TGGCAAAAATGTGGAACACG+AGG | - | chr4.1:41301427-41301446 | None:intergenic | 45.0% | |
| TGTGTACCAATTTCAGCACG+TGG | - | chr4.1:41300308-41300327 | None:intergenic | 45.0% | |
| TTAAGAAGGCTGAGAGGGAA+AGG | + | chr4.1:41300438-41300457 | MS.gene09404:CDS | 45.0% | |
| TTCTCCAGAATGGACAGTAC+CGG | + | chr4.1:41303736-41303755 | MS.gene09404:CDS | 45.0% | |
| TTGGAGAAACCGAACAGGAA+AGG | + | chr4.1:41300207-41300226 | MS.gene09404:CDS | 45.0% | |
| TTTGAGGGATTCACAGTCTC+AGG | + | chr4.1:41299752-41299771 | MS.gene09404:CDS | 45.0% | |
| ! | ACTCATTTTGTCCCTCACTG+TGG | - | chr4.1:41300364-41300383 | None:intergenic | 45.0% |
| ! | AGAAGATAGTGGCTTCCAAG+AGG | + | chr4.1:41304473-41304492 | MS.gene09404:CDS | 45.0% |
| ! | GCAACTGATTCCCTTCTACA+TGG | - | chr4.1:41303963-41303982 | None:intergenic | 45.0% |
| ! | GCTCTTTGTTTGAACAGGGA+AGG | + | chr4.1:41303709-41303728 | MS.gene09404:intron | 45.0% |
| ! | GTGTTTCTTCTGGGGAAAAC+AGG | + | chr4.1:41300276-41300295 | MS.gene09404:CDS | 45.0% |
| ! | GTTGAAAAGCAGTGCCATTG+CGG | + | chr4.1:41302106-41302125 | MS.gene09404:intron | 45.0% |
| ! | TGAGGTATCAGATAGGTTGC+TGG | - | chr4.1:41303776-41303795 | None:intergenic | 45.0% |
| ! | TGTTTGCAGGCATTGCTTAG+AGG | + | chr4.1:41300781-41300800 | MS.gene09404:intron | 45.0% |
| !! | ATAGCGGTATAGCGGATTTC+AGG | - | chr4.1:41302861-41302880 | None:intergenic | 45.0% |
| !! | CAGCAGAGAAGTGTTTCTTC+TGG | + | chr4.1:41300266-41300285 | MS.gene09404:CDS | 45.0% |
| !! | GCAGAGAAGTGTTTCTTCTG+GGG | + | chr4.1:41300268-41300287 | MS.gene09404:CDS | 45.0% |
| !! | GGCAAGAAGCTTCTGAAGTT+TGG | + | chr4.1:41304448-41304467 | MS.gene09404:CDS | 45.0% |
| !!! | AGTTTTGGGTGAGAGTGAGT+CGG | + | chr4.1:41299995-41300014 | MS.gene09404:CDS | 45.0% |
| !! | AAAAAAAAACAAAAAAATTA+GGG | - | chr4.1:41302200-41302219 | None:intergenic | 5.0% |
| !! | TAAAAAAAAACAAAAAAATT+AGG | - | chr4.1:41302201-41302220 | None:intergenic | 5.0% |
| !! | TATTATAATAAATAGTTAAA+TGG | - | chr4.1:41300948-41300967 | None:intergenic | 5.0% |
| !!! | AAACTTTTTTATTTATTTTT+TGG | + | chr4.1:41301017-41301036 | MS.gene09404:intron | 5.0% |
| AATCCTGCCAGGAGAAAGTG+TGG | - | chr4.1:41305090-41305109 | None:intergenic | 50.0% | |
| AATGTGTCATGCCCCTGTGT+TGG | + | chr4.1:41305619-41305638 | MS.gene09404:CDS | 50.0% | |
| ACCTCCTACTCCACCTCTTT+GGG | + | chr4.1:41304918-41304937 | MS.gene09404:CDS | 50.0% | |
| ACCTGAATGCGATTGCGATG+GGG | - | chr4.1:41300512-41300531 | None:intergenic | 50.0% | |
| AGACTATGACATGGCAGTGG+AGG | - | chr4.1:41302040-41302059 | None:intergenic | 50.0% | |
| AGTAGGAGGTGAAGGCAAAG+AGG | - | chr4.1:41304908-41304927 | None:intergenic | 50.0% | |
| AGTGGTTATTGCTGGCGTAG+TGG | + | chr4.1:41301358-41301377 | MS.gene09404:intron | 50.0% | |
| CAAGCTCTACCACTGACCAT+AGG | - | chr4.1:41301252-41301271 | None:intergenic | 50.0% | |
| CACTTTCTCCTGGCAGGATT+TGG | + | chr4.1:41305090-41305109 | MS.gene09404:intron | 50.0% | |
| CAGAAGCTTCTTGCCGATGA+GGG | - | chr4.1:41304443-41304462 | None:intergenic | 50.0% | |
| CATGCGGTGAGTCATGTTCA+AGG | + | chr4.1:41299858-41299877 | MS.gene09404:CDS | 50.0% | |
| CCAATACGTTGCAAAAGCGG+TGG | + | chr4.1:41301489-41301508 | MS.gene09404:intron | 50.0% | |
| CTATGGTCAGTGGTAGAGCT+TGG | + | chr4.1:41301250-41301269 | MS.gene09404:intron | 50.0% | |
| CTGCTCAAGGTTAGCAGAAG+GGG | - | chr4.1:41304827-41304846 | None:intergenic | 50.0% | |
| GAATCGCACTCACGTATTCC+TGG | - | chr4.1:41305359-41305378 | None:intergenic | 50.0% | |
| GACTATGACATGGCAGTGGA+GGG | - | chr4.1:41302039-41302058 | None:intergenic | 50.0% | |
| GAGGATGCTTGAGGCATGTA+TGG | + | chr4.1:41305174-41305193 | MS.gene09404:CDS | 50.0% | |
| GAGGCCGTGGAAAATTGGTT+AGG | + | chr4.1:41304492-41304511 | MS.gene09404:CDS | 50.0% | |
| GATCTTGACTCTGCTGCTCA+AGG | - | chr4.1:41304840-41304859 | None:intergenic | 50.0% | |
| GCAAGACTATGACATGGCAG+TGG | - | chr4.1:41302043-41302062 | None:intergenic | 50.0% | |
| GCCGTGGAAAATTGGTTAGG+AGG | + | chr4.1:41304495-41304514 | MS.gene09404:CDS | 50.0% | |
| GCTGCTCAAGGTTAGCAGAA+GGG | - | chr4.1:41304828-41304847 | None:intergenic | 50.0% | |
| GGAGCAGTTTCATGGTCAGA+AGG | - | chr4.1:41304522-41304541 | None:intergenic | 50.0% | |
| GGCCATTTGTGCACATGTTC+AGG | + | chr4.1:41305557-41305576 | MS.gene09404:CDS | 50.0% | |
| GTAGGAGGTGAAGGCAAAGA+GGG | - | chr4.1:41304907-41304926 | None:intergenic | 50.0% | |
| GTGAAATTCCTAGGGGAGAG+TGG | + | chr4.1:41300183-41300202 | MS.gene09404:CDS | 50.0% | |
| GTGAGAGTGAGTCGGATACA+TGG | + | chr4.1:41300003-41300022 | MS.gene09404:CDS | 50.0% | |
| TATACTGCATGCTGGCGTAG+TGG | - | chr4.1:41301519-41301538 | None:intergenic | 50.0% | |
| TCAACTGGTCAAGACTCGCA+CGG | - | chr4.1:41304744-41304763 | None:intergenic | 50.0% | |
| TCAGAAGCTTCTTGCCGATG+AGG | - | chr4.1:41304444-41304463 | None:intergenic | 50.0% | |
| TCCAAGAGGCCGTGGAAAAT+TGG | + | chr4.1:41304487-41304506 | MS.gene09404:CDS | 50.0% | |
| TCTGGTGACCACTGTCTAGA+AGG | + | chr4.1:41303898-41303917 | MS.gene09404:CDS | 50.0% | |
| TGAGGATGCTGATCCCAAAG+AGG | - | chr4.1:41304934-41304953 | None:intergenic | 50.0% | |
| TGATCCCAAAGAGGTGGAGT+AGG | - | chr4.1:41304925-41304944 | None:intergenic | 50.0% | |
| TGCAGTTGAGTTCACTGTGC+AGG | + | chr4.1:41303263-41303282 | MS.gene09404:intron | 50.0% | |
| TGCGACCAGTTATCACCATG+AGG | - | chr4.1:41304952-41304971 | None:intergenic | 50.0% | |
| TGCTAACATGGAGTGGGATC+CGG | + | chr4.1:41304792-41304811 | MS.gene09404:CDS | 50.0% | |
| TGCTGCTCAAGGTTAGCAGA+AGG | - | chr4.1:41304829-41304848 | None:intergenic | 50.0% | |
| TTTGCATATGCCTTGGGCAG+TGG | - | chr4.1:41301648-41301667 | None:intergenic | 50.0% | |
| ! | AACACAGGGGCATGACACAT+TGG | - | chr4.1:41305620-41305639 | None:intergenic | 50.0% |
| ! | AATCGCTCAGCTGGTTCATC+AGG | + | chr4.1:41305250-41305269 | MS.gene09404:CDS | 50.0% |
| ! | ACACAGGGGCATGACACATT+GGG | - | chr4.1:41305619-41305638 | None:intergenic | 50.0% |
| ! | ACCAATTTTCCACGGCCTCT+TGG | - | chr4.1:41304491-41304510 | None:intergenic | 50.0% |
| ! | CAGATAGGTTGCTGGTTGCT+TGG | - | chr4.1:41303768-41303787 | None:intergenic | 50.0% |
| ! | CGTCTGTAGCTAGTTTGCAC+CGG | + | chr4.1:41305490-41305509 | MS.gene09404:intron | 50.0% |
| ! | GATAATAGGGCTGGGGTATC+TGG | + | chr4.1:41303880-41303899 | MS.gene09404:CDS | 50.0% |
| ! | GCAAATGTGGCGGGATATTG+AGG | + | chr4.1:41299830-41299849 | MS.gene09404:CDS | 50.0% |
| !! | AAAGAGTGCGGCGAGTTTTC+AGG | + | chr4.1:41300123-41300142 | MS.gene09404:CDS | 50.0% |
| !! | AAGAGTGCGGCGAGTTTTCA+GGG | + | chr4.1:41300124-41300143 | MS.gene09404:CDS | 50.0% |
| !! | ATGGCTTGGTTCGACGAATG+TGG | - | chr4.1:41301850-41301869 | None:intergenic | 50.0% |
| !! | CCACCGCTTTTGCAACGTAT+TGG | - | chr4.1:41301492-41301511 | None:intergenic | 50.0% |
| !! | CTTTGGGATCAGCATCCTCA+TGG | + | chr4.1:41304934-41304953 | MS.gene09404:CDS | 50.0% |
| !! | GGCAGTGGTGGATCTTAGTT+AGG | - | chr4.1:41301633-41301652 | None:intergenic | 50.0% |
| !! | TGGTGCTCTAGAAGAACAGC+TGG | + | chr4.1:41304269-41304288 | MS.gene09404:CDS | 50.0% |
| !! | TTCTGAGGTGGACACAGATG+TGG | + | chr4.1:41302508-41302527 | MS.gene09404:intron | 50.0% |
| AGAGCCCAGAGATAGGAGAG+AGG | + | chr4.1:41299955-41299974 | MS.gene09404:CDS | 55.0% | |
| AGAGGTGGAGTAGGAGGTGA+AGG | - | chr4.1:41304916-41304935 | None:intergenic | 55.0% | |
| AGGAGGGGAGATGGGAGAAA+TGG | + | chr4.1:41299783-41299802 | MS.gene09404:CDS | 55.0% | |
| ATATGGGGCGTAGGGCATGT+AGG | + | chr4.1:41303050-41303069 | MS.gene09404:intron | 55.0% | |
| ATTCCTAGGGGAGAGTGGCT+TGG | + | chr4.1:41300188-41300207 | MS.gene09404:CDS | 55.0% | |
| CACCTCCTACTCCACCTCTT+TGG | + | chr4.1:41304917-41304936 | MS.gene09404:CDS | 55.0% | |
| CACGCCTCTCTCCTATCTCT+GGG | - | chr4.1:41299962-41299981 | None:intergenic | 55.0% | |
| CATCCACACTTTCTCCTGGC+AGG | + | chr4.1:41305084-41305103 | MS.gene09404:intron | 55.0% | |
| CTAAGATCCACCACTGCCCA+AGG | + | chr4.1:41301635-41301654 | MS.gene09404:intron | 55.0% | |
| GAGCAGCCACGTGCTGAAAT+TGG | + | chr4.1:41300299-41300318 | MS.gene09404:CDS | 55.0% | |
| GCAACCGGTACTGTCCATTC+TGG | - | chr4.1:41303743-41303762 | None:intergenic | 55.0% | |
| GCAGCACTAAATCGCTCAGC+TGG | + | chr4.1:41305241-41305260 | MS.gene09404:CDS | 55.0% | |
| GCGTAAATTACGCGGCAGAC+AGG | + | chr4.1:41300400-41300419 | MS.gene09404:CDS | 55.0% | |
| GGATGCTGATCCCAAAGAGG+TGG | - | chr4.1:41304931-41304950 | None:intergenic | 55.0% | |
| GGCAAAGAGGGCAAGTCAAG+TGG | - | chr4.1:41304895-41304914 | None:intergenic | 55.0% | |
| GGTCAGTGGTAGAGCTTGGT+CGG | + | chr4.1:41301254-41301273 | MS.gene09404:intron | 55.0% | |
| GTAGCAGGATTGAGCCGCAA+TGG | - | chr4.1:41302123-41302142 | None:intergenic | 55.0% | |
| TCACGAGTTGCTGGACCATC+AGG | + | chr4.1:41300472-41300491 | MS.gene09404:CDS | 55.0% | |
| TCCCAAAGAGGTGGAGTAGG+AGG | - | chr4.1:41304922-41304941 | None:intergenic | 55.0% | |
| TCCCCATCGCAATCGCATTC+AGG | + | chr4.1:41300508-41300527 | MS.gene09404:CDS | 55.0% | |
| TCGCACGGAAACTACTTCCG+AGG | - | chr4.1:41304729-41304748 | None:intergenic | 55.0% | |
| TCTCCTATCTCTGGGCTCTC+AGG | - | chr4.1:41299954-41299973 | None:intergenic | 55.0% | |
| ! | GATAGGAGAGAGGCGTGGTT+TGG | + | chr4.1:41299965-41299984 | MS.gene09404:CDS | 55.0% |
| ! | GTGGCTTGGAGAAACCGAAC+AGG | + | chr4.1:41300202-41300221 | MS.gene09404:CDS | 55.0% |
| ! | TGCAGGCATTGCTTAGAGGC+AGG | + | chr4.1:41300785-41300804 | MS.gene09404:intron | 55.0% |
| !! | TGCGGCGAGTTTTCAGGGAA+TGG | + | chr4.1:41300129-41300148 | MS.gene09404:CDS | 55.0% |
| CCACGCCTCTCTCCTATCTC+TGG | - | chr4.1:41299963-41299982 | None:intergenic | 60.0% | |
| CCAGAGATAGGAGAGAGGCG+TGG | + | chr4.1:41299960-41299979 | MS.gene09404:CDS | 60.0% | |
| CGTCGAGAAGGAGGGGAGAT+GGG | + | chr4.1:41299775-41299794 | MS.gene09404:CDS | 60.0% | |
| GCACCTGAGAGCCCAGAGAT+AGG | + | chr4.1:41299948-41299967 | MS.gene09404:CDS | 60.0% | |
| GCAGAAGGGGCTGCATCTTC+CGG | - | chr4.1:41304814-41304833 | None:intergenic | 60.0% | |
| GCATATGCCTTGGGCAGTGG+TGG | - | chr4.1:41301645-41301664 | None:intergenic | 60.0% | |
| GCTGGTTGCTTGGCTGCAAC+CGG | - | chr4.1:41303758-41303777 | None:intergenic | 60.0% | |
| GTGTCATGCCCCTGTGTTGG+AGG | + | chr4.1:41305622-41305641 | MS.gene09404:CDS | 60.0% | |
| TAGTGGCTTCCAAGAGGCCG+TGG | + | chr4.1:41304479-41304498 | MS.gene09404:CDS | 60.0% | |
| TCTCCAAGCCACTCTCCCCT+AGG | - | chr4.1:41300194-41300213 | None:intergenic | 60.0% | |
| !! | AGTCTCAGGCGTCGAGAAGG+AGG | + | chr4.1:41299766-41299785 | MS.gene09404:CDS | 60.0% |
| !! | CACAGTCTCAGGCGTCGAGA+AGG | + | chr4.1:41299763-41299782 | MS.gene09404:CDS | 60.0% |
| !! | GTCTCAGGCGTCGAGAAGGA+GGG | + | chr4.1:41299767-41299786 | MS.gene09404:CDS | 60.0% |
| !! | TCTCAGGCGTCGAGAAGGAG+GGG | + | chr4.1:41299768-41299787 | MS.gene09404:CDS | 60.0% |
| GCGTCGAGAAGGAGGGGAGA+TGG | + | chr4.1:41299774-41299793 | MS.gene09404:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 41299705 | 41305670 | 41299705 | ID=MS.gene09404 |
| chr4.1 | mRNA | 41299705 | 41305670 | 41299705 | ID=MS.gene09404.t1;Parent=MS.gene09404 |
| chr4.1 | exon | 41299705 | 41300529 | 41299705 | ID=MS.gene09404.t1.exon1;Parent=MS.gene09404.t1 |
| chr4.1 | CDS | 41299705 | 41300529 | 41299705 | ID=cds.MS.gene09404.t1;Parent=MS.gene09404.t1 |
| chr4.1 | exon | 41300790 | 41300908 | 41300790 | ID=MS.gene09404.t1.exon2;Parent=MS.gene09404.t1 |
| chr4.1 | CDS | 41300790 | 41300908 | 41300790 | ID=cds.MS.gene09404.t1;Parent=MS.gene09404.t1 |
| chr4.1 | exon | 41303726 | 41304619 | 41303726 | ID=MS.gene09404.t1.exon3;Parent=MS.gene09404.t1 |
| chr4.1 | CDS | 41303726 | 41304619 | 41303726 | ID=cds.MS.gene09404.t1;Parent=MS.gene09404.t1 |
| chr4.1 | exon | 41304708 | 41304978 | 41304708 | ID=MS.gene09404.t1.exon4;Parent=MS.gene09404.t1 |
| chr4.1 | CDS | 41304708 | 41304978 | 41304708 | ID=cds.MS.gene09404.t1;Parent=MS.gene09404.t1 |
| chr4.1 | exon | 41305106 | 41305271 | 41305106 | ID=MS.gene09404.t1.exon5;Parent=MS.gene09404.t1 |
| chr4.1 | CDS | 41305106 | 41305271 | 41305106 | ID=cds.MS.gene09404.t1;Parent=MS.gene09404.t1 |
| chr4.1 | exon | 41305360 | 41305465 | 41305360 | ID=MS.gene09404.t1.exon6;Parent=MS.gene09404.t1 |
| chr4.1 | CDS | 41305360 | 41305465 | 41305360 | ID=cds.MS.gene09404.t1;Parent=MS.gene09404.t1 |
| chr4.1 | exon | 41305553 | 41305670 | 41305553 | ID=MS.gene09404.t1.exon7;Parent=MS.gene09404.t1 |
| chr4.1 | CDS | 41305553 | 41305670 | 41305553 | ID=cds.MS.gene09404.t1;Parent=MS.gene09404.t1 |
| Gene Sequence |
| Protein sequence |
