Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049978.t1 | XP_024640872.1 | 89.6 | 318 | 27 | 3 | 1 | 313 | 1 | 317 | 2.60E-144 | 521.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049978.t1 | Q9SB47 | 30.3 | 340 | 190 | 10 | 1 | 315 | 1 | 318 | 8.3e-14 | 79.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049978.t1 | G7JYE9 | 89.6 | 318 | 27 | 3 | 1 | 313 | 1 | 317 | 1.9e-144 | 521.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049978 | MS.gene049980 | 0.994722 | 1.24E-209 | -1.69E-46 |
| MS.gene049978 | MS.gene21312 | 0.925865 | 1.03E-90 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049978.t1 | MTR_5g066450 | 91.195 | 318 | 22 | 3 | 1 | 313 | 1 | 317 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 96 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAGAAATATTTGGATTA+TGG | 0.170990 | 5.3:+52179631 | None:intergenic |
| ATATATTCTGAAGAAATATT+TGG | 0.172105 | 5.3:+52179624 | None:intergenic |
| GAGGGCGAGGCAGGGGATTC+TGG | 0.243119 | 5.3:-52179533 | MS.gene049978:CDS |
| CAAAATCTACAAGTACAAAA+AGG | 0.267103 | 5.3:-52179308 | MS.gene049978:CDS |
| TGAATGCATTCTCCGATAAA+AGG | 0.308337 | 5.3:-52182108 | MS.gene049978:CDS |
| GCTGATCGTGCTCAAGATTC+TGG | 0.314709 | 5.3:-52182241 | MS.gene049978:CDS |
| CAAATCAGTCTCCAGCATTC+AGG | 0.337696 | 5.3:-52179575 | MS.gene049978:CDS |
| TTCCAAACCGGGTTTCTATA+GGG | 0.348407 | 5.3:+52179786 | None:intergenic |
| CTGAATGCTGGAGACTGATT+TGG | 0.356018 | 5.3:+52179576 | None:intergenic |
| ATTCCAAACCGGGTTTCTAT+AGG | 0.356290 | 5.3:+52179785 | None:intergenic |
| ACCAAGCCTTGCTGAGTACT+TGG | 0.365165 | 5.3:-52179247 | MS.gene049978:CDS |
| GACCTCTTGTAAAATCGTTC+TGG | 0.369590 | 5.3:+52179420 | None:intergenic |
| AGCAAGGCTTGGTCCAGAAT+TGG | 0.370128 | 5.3:+52179257 | None:intergenic |
| CTATATTCTGAAGCAGGAAT+TGG | 0.374109 | 5.3:+52179600 | None:intergenic |
| ATCGTTGAATACCATATAAT+AGG | 0.376974 | 5.3:+52179366 | None:intergenic |
| TTATCGGAGAATGCATTCAT+TGG | 0.385702 | 5.3:+52182112 | None:intergenic |
| TGCTCCGGCCGGACATGAAC+AGG | 0.401487 | 5.3:+52182082 | None:intergenic |
| ACCACAACCACTGTCTTCAT+TGG | 0.403576 | 5.3:+52179443 | None:intergenic |
| AGAGGAAGAGGAGGAGGAGG+TGG | 0.406002 | 5.3:+52182055 | None:intergenic |
| GAAATATTTGGATTATGGTT+GGG | 0.406081 | 5.3:+52179636 | None:intergenic |
| AACAACAGAAGCCATGTTTC+AGG | 0.410490 | 5.3:-52179507 | MS.gene049978:CDS |
| ACTCTAGTCGAGGGCGAGGC+AGG | 0.422136 | 5.3:-52179542 | MS.gene049978:CDS |
| CCTCGCCCTCGACTAGAGTT+AGG | 0.437061 | 5.3:+52179546 | None:intergenic |
| TTTAGAGGAAGAGGAGGAGG+AGG | 0.447022 | 5.3:+52182052 | None:intergenic |
| AACTTTCCATTACGTCCATC+AGG | 0.451990 | 5.3:-52179738 | MS.gene049978:CDS |
| AGAAATATTTGGATTATGGT+TGG | 0.454619 | 5.3:+52179635 | None:intergenic |
| AACTCGGGAACAAAATTTAG+AGG | 0.455286 | 5.3:+52182037 | None:intergenic |
| CCTCTAGGTCCATTCCAAAC+CGG | 0.456547 | 5.3:+52179774 | None:intergenic |
| TTAGGATTGTTCCTGAATGC+TGG | 0.468362 | 5.3:+52179564 | None:intergenic |
| TGCAAGAACACTAGGTGTAC+TGG | 0.469110 | 5.3:+52182207 | None:intergenic |
| GTGGTACTTATCCAAGTCCT+AGG | 0.471418 | 5.3:-52179713 | MS.gene049978:CDS |
| CTCTAGGTCCATTCCAAACC+GGG | 0.476742 | 5.3:+52179775 | None:intergenic |
| TTGCACCAGGCATGAATCAA+TGG | 0.477134 | 5.3:-52179659 | MS.gene049978:CDS |
| CCTTGCTGAGTACTTGGCTT+CGG | 0.480630 | 5.3:-52179241 | MS.gene049978:CDS |
| CACCCTATAGAAACCCGGTT+TGG | 0.486436 | 5.3:-52179788 | MS.gene049978:CDS |
| CATGTTTCAGGACGGGGTAG+TGG | 0.496188 | 5.3:-52179495 | MS.gene049978:CDS |
| TGAATGCTGTGACGAAAACT+CGG | 0.497237 | 5.3:+52182021 | None:intergenic |
| AAAGGAGTCCTGTTCATGTC+CGG | 0.499050 | 5.3:-52182090 | MS.gene049978:CDS |
| TCTAGTCGAGGGCGAGGCAG+GGG | 0.500795 | 5.3:-52179540 | MS.gene049978:CDS |
| TTTGGACTATATTCTGAAGC+AGG | 0.501364 | 5.3:+52179594 | None:intergenic |
| GGAGGAGGTGGCAAATGCTC+CGG | 0.505617 | 5.3:+52182067 | None:intergenic |
| AAATTTAGAGGAAGAGGAGG+AGG | 0.507025 | 5.3:+52182049 | None:intergenic |
| TTATACTGAGGAGGGCCTCT+AGG | 0.509258 | 5.3:+52179759 | None:intergenic |
| TTGGGCCATTGATTCATGCC+TGG | 0.515424 | 5.3:+52179654 | None:intergenic |
| GGTGATTCAAACCTAGGACT+TGG | 0.517232 | 5.3:+52179702 | None:intergenic |
| CAGAAGCCATGTTTCAGGAC+GGG | 0.517719 | 5.3:-52179502 | MS.gene049978:CDS |
| GCCAAGTACTCAGCAAGGCT+TGG | 0.520790 | 5.3:+52179246 | None:intergenic |
| TCCAATGAAGACAGTGGTTG+TGG | 0.522840 | 5.3:-52179444 | MS.gene049978:CDS |
| ACAAAATTTAGAGGAAGAGG+AGG | 0.525858 | 5.3:+52182046 | None:intergenic |
| GGAACAAAATTTAGAGGAAG+AGG | 0.527833 | 5.3:+52182043 | None:intergenic |
| GTTGAAGAATCTTCAGCCAA+TGG | 0.529369 | 5.3:+52182181 | None:intergenic |
| CTCTAGTCGAGGGCGAGGCA+GGG | 0.530316 | 5.3:-52179541 | MS.gene049978:CDS |
| ACCGGGTTTCTATAGGGTGT+TGG | 0.539818 | 5.3:+52179792 | None:intergenic |
| ACAAAGAAAGAAACGGTTGA+AGG | 0.541768 | 5.3:-52182278 | MS.gene049978:CDS |
| GCTCAAGATTCTGGTGGTGA+AGG | 0.542553 | 5.3:-52182232 | MS.gene049978:CDS |
| CTGCCTGGTGATTCAAACCT+AGG | 0.548534 | 5.3:+52179696 | None:intergenic |
| TCTGTATAGTAATTAAATCT+CGG | 0.550622 | 5.3:+52182136 | None:intergenic |
| TATAGAAACCCGGTTTGGAA+TGG | 0.550677 | 5.3:-52179783 | MS.gene049978:CDS |
| CACTACCCCGTCCTGAAACA+TGG | 0.553581 | 5.3:+52179496 | None:intergenic |
| ATTCAGAACAAAGAAAGAAA+CGG | 0.553697 | 5.3:-52182285 | MS.gene049978:CDS |
| TAGTGTTCTTGCAAATCCAT+TGG | 0.559128 | 5.3:-52182197 | MS.gene049978:CDS |
| CCATTACGTCCATCAGGTGG+TGG | 0.559408 | 5.3:-52179732 | MS.gene049978:CDS |
| TTTCCACGGATCTTCGACCA+TGG | 0.559648 | 5.3:+52179398 | None:intergenic |
| AATGGATTTGCAAGAACACT+AGG | 0.560524 | 5.3:+52182199 | None:intergenic |
| CCACCACCTGATGGACGTAA+TGG | 0.561664 | 5.3:+52179732 | None:intergenic |
| AACAATCCTAACTCTAGTCG+AGG | 0.563734 | 5.3:-52179552 | MS.gene049978:CDS |
| CCTAACTCTAGTCGAGGGCG+AGG | 0.567720 | 5.3:-52179546 | MS.gene049978:CDS |
| CCATCATACAACTTTGCACC+AGG | 0.567805 | 5.3:-52179672 | MS.gene049978:CDS |
| GATCAAGTTCTCATGGTCGC+TGG | 0.572945 | 5.3:-52179467 | MS.gene049978:CDS |
| TCAGGACGGGGTAGTGGACA+AGG | 0.574030 | 5.3:-52179489 | MS.gene049978:CDS |
| GGCAATGCTTGAGTGGGAGA+TGG | 0.579037 | 5.3:+52179813 | None:intergenic |
| AAGTTGTATGATGGACTGCC+TGG | 0.584395 | 5.3:+52179681 | None:intergenic |
| CCTGGTGCAAAGTTGTATGA+TGG | 0.585843 | 5.3:+52179672 | None:intergenic |
| AGAAGCCATGTTTCAGGACG+GGG | 0.589396 | 5.3:-52179501 | MS.gene049978:CDS |
| TTCTTCAACTGTGTTATCAG+CGG | 0.590156 | 5.3:-52182167 | MS.gene049978:CDS |
| AGTCCTAGGTTTGAATCACC+AGG | 0.592057 | 5.3:-52179699 | MS.gene049978:CDS |
| GGACAAGGATCAAGTTCTCA+TGG | 0.593437 | 5.3:-52179474 | MS.gene049978:CDS |
| GGGTGTTGGCAATGCTTGAG+TGG | 0.598136 | 5.3:+52179806 | None:intergenic |
| GAGTCCTGTTCATGTCCGGC+CGG | 0.598203 | 5.3:-52182086 | MS.gene049978:CDS |
| ATGGAAAGTTATACTGAGGA+GGG | 0.600848 | 5.3:+52179751 | None:intergenic |
| AATGGAAAGTTATACTGAGG+AGG | 0.613089 | 5.3:+52179750 | None:intergenic |
| GGTCCATGGTCGAAGATCCG+TGG | 0.620332 | 5.3:-52179401 | MS.gene049978:CDS |
| GCCAACACCCTATAGAAACC+CGG | 0.621280 | 5.3:-52179793 | MS.gene049978:CDS |
| GAGGTGGCAAATGCTCCGGC+CGG | 0.628444 | 5.3:+52182071 | None:intergenic |
| GAATGCTGTGACGAAAACTC+GGG | 0.629007 | 5.3:+52182022 | None:intergenic |
| GGATAAGTACCACCACCTGA+TGG | 0.630693 | 5.3:+52179723 | None:intergenic |
| ACAGAAGCCATGTTTCAGGA+CGG | 0.632034 | 5.3:-52179503 | MS.gene049978:CDS |
| CCGAAGCCAAGTACTCAGCA+AGG | 0.648916 | 5.3:+52179241 | None:intergenic |
| CGTAATGGAAAGTTATACTG+AGG | 0.666525 | 5.3:+52179747 | None:intergenic |
| ACAATCCTAACTCTAGTCGA+GGG | 0.667093 | 5.3:-52179551 | MS.gene049978:CDS |
| GATCGTGCTCAAGATTCTGG+TGG | 0.668441 | 5.3:-52182238 | MS.gene049978:CDS |
| TTTCCATTACGTCCATCAGG+TGG | 0.670092 | 5.3:-52179735 | MS.gene049978:CDS |
| GTGGGAGATGGAGACATCTG+CGG | 0.673802 | 5.3:+52179825 | None:intergenic |
| GGTGTTGGCAATGCTTGAGT+GGG | 0.676495 | 5.3:+52179807 | None:intergenic |
| CCGGTTTGGAATGGACCTAG+AGG | 0.693305 | 5.3:-52179774 | MS.gene049978:CDS |
| CGCTGGTCCAATGAAGACAG+TGG | 0.716351 | 5.3:-52179450 | MS.gene049978:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAGTTAAATACTCAATT+AGG | - | chr5.3:52179544-52179563 | MS.gene049978:CDS | 15.0% |
| !!! | AATTTTTGAAACCTATTATA+TGG | - | chr5.3:52182118-52182137 | MS.gene049978:CDS | 15.0% |
| !!! | ATATATTCTGAAGAAATATT+TGG | + | chr5.3:52181874-52181893 | None:intergenic | 15.0% |
| !!! | ATTTATTTTGTTATTGTAAC+TGG | - | chr5.3:52181165-52181184 | MS.gene049978:intron | 15.0% |
| !!! | TTAACATTTTAACTGTTTTT+TGG | - | chr5.3:52181008-52181027 | MS.gene049978:intron | 15.0% |
| !!! | TTTTTTTTTGTTTGTTACAT+TGG | + | chr5.3:52179897-52179916 | None:intergenic | 15.0% |
| !! | AAAATCTACAAGTACAAAAA+GGG | - | chr5.3:52182188-52182207 | MS.gene049978:CDS | 20.0% |
| !! | ATTAAGATATGATTGAATTG+AGG | - | chr5.3:52181489-52181508 | MS.gene049978:intron | 20.0% |
| !! | ATTATTATAGCAATGCATAT+TGG | - | chr5.3:52180782-52180801 | MS.gene049978:intron | 20.0% |
| !! | CTTCAAACTATATATTTGAA+GGG | + | chr5.3:52180850-52180869 | None:intergenic | 20.0% |
| !! | TCAGGTTAAATTAATATCTT+CGG | + | chr5.3:52181321-52181340 | None:intergenic | 20.0% |
| !! | TCTGTATAGTAATTAAATCT+CGG | + | chr5.3:52179362-52179381 | None:intergenic | 20.0% |
| !! | TCTTCAAACTATATATTTGA+AGG | + | chr5.3:52180851-52180870 | None:intergenic | 20.0% |
| !! | TTTATAATTTGACTCTATCA+AGG | - | chr5.3:52180904-52180923 | MS.gene049978:intron | 20.0% |
| ! | AACAAAACAAATAGGGTTTA+GGG | - | chr5.3:52180031-52180050 | MS.gene049978:intron | 25.0% |
| ! | AATAAAGTCCGTCATTATAT+GGG | - | chr5.3:52180530-52180549 | MS.gene049978:intron | 25.0% |
| ! | AATTAGGTTACTGAAATTGT+AGG | - | chr5.3:52179560-52179579 | MS.gene049978:CDS | 25.0% |
| ! | AGAAATATTTGGATTATGGT+TGG | + | chr5.3:52181863-52181882 | None:intergenic | 25.0% |
| ! | AGAGAAGAACAAAACAAATA+GGG | - | chr5.3:52180024-52180043 | MS.gene049978:intron | 25.0% |
| ! | ATAGGTTTCAAAAATTTCCA+CGG | + | chr5.3:52182114-52182133 | None:intergenic | 25.0% |
| ! | ATCGTTGAATACCATATAAT+AGG | + | chr5.3:52182132-52182151 | None:intergenic | 25.0% |
| ! | ATCTTCGGTATATTATTAGA+GGG | + | chr5.3:52181306-52181325 | None:intergenic | 25.0% |
| ! | ATGACGATGATGATTTATTA+GGG | - | chr5.3:52179515-52179534 | MS.gene049978:CDS | 25.0% |
| ! | ATTCAGAACAAAGAAAGAAA+CGG | - | chr5.3:52179210-52179229 | MS.gene049978:CDS | 25.0% |
| ! | CAAAATCTACAAGTACAAAA+AGG | - | chr5.3:52182187-52182206 | MS.gene049978:CDS | 25.0% |
| ! | CCTTGATCAATAAAATTACA+GGG | - | chr5.3:52181234-52181253 | MS.gene049978:intron | 25.0% |
| ! | CTGAAGAAATATTTGGATTA+TGG | + | chr5.3:52181867-52181886 | None:intergenic | 25.0% |
| ! | GAAATATTTGGATTATGGTT+GGG | + | chr5.3:52181862-52181881 | None:intergenic | 25.0% |
| ! | GAAGATATTAATTTAACCTG+AGG | - | chr5.3:52181320-52181339 | MS.gene049978:intron | 25.0% |
| ! | GGACTATAATGATATTAAGT+TGG | - | chr5.3:52180562-52180581 | MS.gene049978:intron | 25.0% |
| ! | TAATAAAGTCCGTCATTATA+TGG | - | chr5.3:52180529-52180548 | MS.gene049978:intron | 25.0% |
| ! | TACAATTTCATAGACTATGT+TGG | + | chr5.3:52180503-52180522 | None:intergenic | 25.0% |
| ! | TAGAGAAGAACAAAACAAAT+AGG | - | chr5.3:52180023-52180042 | MS.gene049978:intron | 25.0% |
| ! | TATCTTCGGTATATTATTAG+AGG | + | chr5.3:52181307-52181326 | None:intergenic | 25.0% |
| ! | TTAAAATTTGAACCGTTTGA+AGG | + | chr5.3:52180222-52180241 | None:intergenic | 25.0% |
| !! | CCTGTAATTTTATTGATCAA+GGG | + | chr5.3:52181236-52181255 | None:intergenic | 25.0% |
| !! | TCAAACGGTTCAAATTTTAA+GGG | - | chr5.3:52180222-52180241 | MS.gene049978:intron | 25.0% |
| !! | TTCAAACGGTTCAAATTTTA+AGG | - | chr5.3:52180221-52180240 | MS.gene049978:intron | 25.0% |
| !!! | ATATTGATAATGTGTTGACA+AGG | - | chr5.3:52180700-52180719 | MS.gene049978:intron | 25.0% |
| !!! | TATTAAGTTGGTATTGATGT+CGG | - | chr5.3:52180574-52180593 | MS.gene049978:intron | 25.0% |
| AAATTCTAACCTTCTAAACC+TGG | + | chr5.3:52181149-52181168 | None:intergenic | 30.0% | |
| AACCGTTTGAAGGAAAATTT+GGG | + | chr5.3:52180212-52180231 | None:intergenic | 30.0% | |
| AATTCTAACCTTCTAAACCT+GGG | + | chr5.3:52181148-52181167 | None:intergenic | 30.0% | |
| ACAGAGAAGAACAATAAACA+TGG | - | chr5.3:52179936-52179955 | MS.gene049978:intron | 30.0% | |
| AGATATGATTGAATTGAGGT+CGG | - | chr5.3:52181493-52181512 | MS.gene049978:intron | 30.0% | |
| ATAATTTGACTCTATCAAGG+AGG | - | chr5.3:52180907-52180926 | MS.gene049978:intron | 30.0% | |
| CAGAGAAGAACAATAAACAT+GGG | - | chr5.3:52179937-52179956 | MS.gene049978:intron | 30.0% | |
| CCCTTGATCAATAAAATTAC+AGG | - | chr5.3:52181233-52181252 | MS.gene049978:intron | 30.0% | |
| GAACAAAACAAATAGGGTTT+AGG | - | chr5.3:52180030-52180049 | MS.gene049978:intron | 30.0% | |
| GAATAACATCAGCATAGATT+AGG | + | chr5.3:52180760-52180779 | None:intergenic | 30.0% | |
| GATGACGATGATGATTTATT+AGG | - | chr5.3:52179514-52179533 | MS.gene049978:CDS | 30.0% | |
| TAAGTTCAGGGTTATTTGTT+AGG | - | chr5.3:52181079-52181098 | MS.gene049978:intron | 30.0% | |
| TCATTATATGGGTATTTGCA+GGG | - | chr5.3:52180541-52180560 | MS.gene049978:intron | 30.0% | |
| TGCAAATACCCATATAATGA+CGG | + | chr5.3:52180541-52180560 | None:intergenic | 30.0% | |
| ! | AAGTTCAGGGTTATTTGTTA+GGG | - | chr5.3:52181080-52181099 | MS.gene049978:intron | 30.0% |
| ! | CAAACGGTTCAAATTTTAAG+GGG | - | chr5.3:52180223-52180242 | MS.gene049978:intron | 30.0% |
| ! | CCCTGTAATTTTATTGATCA+AGG | + | chr5.3:52181237-52181256 | None:intergenic | 30.0% |
| ! | TACCCAAATTTTCCTTCAAA+CGG | - | chr5.3:52180207-52180226 | MS.gene049978:intron | 30.0% |
| ! | TCATACATTTTCTTCAGTGT+TGG | + | chr5.3:52182295-52182314 | None:intergenic | 30.0% |
| ! | TTTTTGTTCCTTGAAAGACT+AGG | + | chr5.3:52181413-52181432 | None:intergenic | 30.0% |
| !! | ATTAAGTTGGTATTGATGTC+GGG | - | chr5.3:52180575-52180594 | MS.gene049978:intron | 30.0% |
| !! | GTATATTATTAGAGGGCATT+AGG | + | chr5.3:52181299-52181318 | None:intergenic | 30.0% |
| !!! | GTTTTTTGGAGTTAGATAGA+TGG | - | chr5.3:52181022-52181041 | MS.gene049978:intron | 30.0% |
| !!! | TTTTTTACCTTTTGGCAGTT+AGG | - | chr5.3:52181055-52181074 | MS.gene049978:intron | 30.0% |
| AACTCGGGAACAAAATTTAG+AGG | + | chr5.3:52179461-52179480 | None:intergenic | 35.0% | |
| AACTTATCCTAACTGCCAAA+AGG | + | chr5.3:52181065-52181084 | None:intergenic | 35.0% | |
| AATGGAAAGTTATACTGAGG+AGG | + | chr5.3:52181748-52181767 | None:intergenic | 35.0% | |
| AATGGAAATGAGGAGAGAAA+AGG | - | chr5.3:52180167-52180186 | MS.gene049978:intron | 35.0% | |
| ACAAAATTTAGAGGAAGAGG+AGG | + | chr5.3:52179452-52179471 | None:intergenic | 35.0% | |
| ACAAAGAAAGAAACGGTTGA+AGG | - | chr5.3:52179217-52179236 | MS.gene049978:CDS | 35.0% | |
| ACAAAGAGAGAATGGAAATG+AGG | - | chr5.3:52180157-52180176 | MS.gene049978:intron | 35.0% | |
| ACCTAAGTGAAAAACTGTGA+CGG | + | chr5.3:52180345-52180364 | None:intergenic | 35.0% | |
| AGAACAATAAACATGGGTGT+AGG | - | chr5.3:52179943-52179962 | MS.gene049978:intron | 35.0% | |
| ATCCTAAACAGAATACAAGC+AGG | + | chr5.3:52180825-52180844 | None:intergenic | 35.0% | |
| ATCTACAAGTACAAAAAGGG+AGG | - | chr5.3:52182191-52182210 | MS.gene049978:CDS | 35.0% | |
| ATGGAAAGTTATACTGAGGA+GGG | + | chr5.3:52181747-52181766 | None:intergenic | 35.0% | |
| ATGGAAATGAGGAGAGAAAA+GGG | - | chr5.3:52180168-52180187 | MS.gene049978:intron | 35.0% | |
| CTTAATAAGTCCGAGTTAAG+TGG | + | chr5.3:52179591-52179610 | None:intergenic | 35.0% | |
| GAACCGTTTGAAGGAAAATT+TGG | + | chr5.3:52180213-52180232 | None:intergenic | 35.0% | |
| GAATGTTTGATACGATGGAA+GGG | - | chr5.3:52180097-52180116 | MS.gene049978:intron | 35.0% | |
| GAGAAGAAACACTAGAGAAA+GGG | + | chr5.3:52181270-52181289 | None:intergenic | 35.0% | |
| GAGCTTGATTGAGTAAAGTT+TGG | - | chr5.3:52181342-52181361 | MS.gene049978:intron | 35.0% | |
| GGAACAAAATTTAGAGGAAG+AGG | + | chr5.3:52179455-52179474 | None:intergenic | 35.0% | |
| GTCATTATATGGGTATTTGC+AGG | - | chr5.3:52180540-52180559 | MS.gene049978:intron | 35.0% | |
| TAGTGTTCTTGCAAATCCAT+TGG | - | chr5.3:52179298-52179317 | MS.gene049978:CDS | 35.0% | |
| TCCTAAACAGAATACAAGCA+GGG | + | chr5.3:52180824-52180843 | None:intergenic | 35.0% | |
| TCTACAAGTACAAAAAGGGA+GGG | - | chr5.3:52182192-52182211 | MS.gene049978:CDS | 35.0% | |
| TGAATGCATTCTCCGATAAA+AGG | - | chr5.3:52179387-52179406 | MS.gene049978:CDS | 35.0% | |
| TGAATGTTTGATACGATGGA+AGG | - | chr5.3:52180096-52180115 | MS.gene049978:intron | 35.0% | |
| TGAGAAGAAACACTAGAGAA+AGG | + | chr5.3:52181271-52181290 | None:intergenic | 35.0% | |
| TGCAGATTGTAGTCTATTGA+TGG | + | chr5.3:52180880-52180899 | None:intergenic | 35.0% | |
| TGGAGTTAGATAGATGGTTA+GGG | - | chr5.3:52181028-52181047 | MS.gene049978:intron | 35.0% | |
| TGTTGTGCTATAAAGTAAGC+TGG | + | chr5.3:52181438-52181457 | None:intergenic | 35.0% | |
| TTATCGGAGAATGCATTCAT+TGG | + | chr5.3:52179386-52179405 | None:intergenic | 35.0% | |
| TTCTTCAACTGTGTTATCAG+CGG | - | chr5.3:52179328-52179347 | MS.gene049978:CDS | 35.0% | |
| TTGCTTGGGAGGTTTATATA+AGG | - | chr5.3:52181114-52181133 | MS.gene049978:intron | 35.0% | |
| TTGGAGTTAGATAGATGGTT+AGG | - | chr5.3:52181027-52181046 | MS.gene049978:intron | 35.0% | |
| ! | AAAGGGTTTAGGGTTGAAAA+CGG | - | chr5.3:52180129-52180148 | MS.gene049978:intron | 35.0% |
| ! | AATGGATTTGCAAGAACACT+AGG | + | chr5.3:52179299-52179318 | None:intergenic | 35.0% |
| ! | AGTTCAGGGTTATTTGTTAG+GGG | - | chr5.3:52181081-52181100 | MS.gene049978:intron | 35.0% |
| ! | ATGAACAGGACTCCTTTTAT+CGG | + | chr5.3:52179402-52179421 | None:intergenic | 35.0% |
| ! | CGTAATGGAAAGTTATACTG+AGG | + | chr5.3:52181751-52181770 | None:intergenic | 35.0% |
| !! | CTATATTCTGAAGCAGGAAT+TGG | + | chr5.3:52181898-52181917 | None:intergenic | 35.0% |
| !! | TTAAGTTGGTATTGATGTCG+GGG | - | chr5.3:52180576-52180595 | MS.gene049978:intron | 35.0% |
| !! | TTTGGACTATATTCTGAAGC+AGG | + | chr5.3:52181904-52181923 | None:intergenic | 35.0% |
| !!! | AGGGTCAGTTTTTTACCTTT+TGG | - | chr5.3:52181047-52181066 | MS.gene049978:intron | 35.0% |
| !!! | GTTTTTAGCAAGTCCAATTC+TGG | - | chr5.3:52182225-52182244 | MS.gene049978:CDS | 35.0% |
| AAACAGCATGACACTAACCT+AGG | + | chr5.3:52180417-52180436 | None:intergenic | 40.0% | |
| AAATTTAGAGGAAGAGGAGG+AGG | + | chr5.3:52179449-52179468 | None:intergenic | 40.0% | |
| AACAACAGAAGCCATGTTTC+AGG | - | chr5.3:52181988-52182007 | MS.gene049978:intron | 40.0% | |
| AACAATCCTAACTCTAGTCG+AGG | - | chr5.3:52181943-52181962 | MS.gene049978:intron | 40.0% | |
| AACCACTTGTGTTAGTGACT+AGG | - | chr5.3:52179693-52179712 | MS.gene049978:CDS | 40.0% | |
| AACTTTCCATTACGTCCATC+AGG | - | chr5.3:52181757-52181776 | MS.gene049978:intron | 40.0% | |
| AATGAGGAGAGAAAAGGGTT+AGG | - | chr5.3:52180173-52180192 | MS.gene049978:intron | 40.0% | |
| ACAATCCTAACTCTAGTCGA+GGG | - | chr5.3:52181944-52181963 | MS.gene049978:intron | 40.0% | |
| ACCCTGCTTGTATTCTGTTT+AGG | - | chr5.3:52180820-52180839 | MS.gene049978:intron | 40.0% | |
| AGGTAGTCAATACTGGATAG+AGG | - | chr5.3:52179713-52179732 | MS.gene049978:CDS | 40.0% | |
| AGTGACTAGGTAGTCAATAC+TGG | - | chr5.3:52179706-52179725 | MS.gene049978:CDS | 40.0% | |
| ATAAACCTCCCAAGCAACAA+GGG | + | chr5.3:52181111-52181130 | None:intergenic | 40.0% | |
| ATGAGGAGAGAAAAGGGTTA+GGG | - | chr5.3:52180174-52180193 | MS.gene049978:intron | 40.0% | |
| ATTCCAAACCGGGTTTCTAT+AGG | + | chr5.3:52181713-52181732 | None:intergenic | 40.0% | |
| CCTAAGTGAAAAACTGTGAC+GGG | + | chr5.3:52180344-52180363 | None:intergenic | 40.0% | |
| GACCTCTTGTAAAATCGTTC+TGG | + | chr5.3:52182078-52182097 | None:intergenic | 40.0% | |
| GAGAAGAGAGAAAGGGTTTA+GGG | - | chr5.3:52180119-52180138 | MS.gene049978:intron | 40.0% | |
| GCAGGAGCAATAGGTATATT+GGG | + | chr5.3:52180949-52180968 | None:intergenic | 40.0% | |
| GGTAGTCAATACTGGATAGA+GGG | - | chr5.3:52179714-52179733 | MS.gene049978:CDS | 40.0% | |
| GGTGTGAATGTTTGATACGA+TGG | - | chr5.3:52180092-52180111 | MS.gene049978:intron | 40.0% | |
| GTTGAAGAATCTTCAGCCAA+TGG | + | chr5.3:52179317-52179336 | None:intergenic | 40.0% | |
| TACCTAGTCACTAACACAAG+TGG | + | chr5.3:52179698-52179717 | None:intergenic | 40.0% | |
| TATAAACCTCCCAAGCAACA+AGG | + | chr5.3:52181112-52181131 | None:intergenic | 40.0% | |
| TCTTCTGCCGTAAACCTTTA+AGG | + | chr5.3:52180971-52180990 | None:intergenic | 40.0% | |
| TGAATGCTGTGACGAAAACT+CGG | + | chr5.3:52179477-52179496 | None:intergenic | 40.0% | |
| TGGCAGTTAGGATAAGTTCA+GGG | - | chr5.3:52181067-52181086 | MS.gene049978:intron | 40.0% | |
| TTAGGATTGTTCCTGAATGC+TGG | + | chr5.3:52181934-52181953 | None:intergenic | 40.0% | |
| TTCCAAACCGGGTTTCTATA+GGG | + | chr5.3:52181712-52181731 | None:intergenic | 40.0% | |
| TTGGCAGTTAGGATAAGTTC+AGG | - | chr5.3:52181066-52181085 | MS.gene049978:intron | 40.0% | |
| TTTACTCAATCAAGCTCCTC+AGG | + | chr5.3:52181339-52181358 | None:intergenic | 40.0% | |
| ! | ACGATTTTACAAGAGGTCCA+TGG | - | chr5.3:52182080-52182099 | MS.gene049978:CDS | 40.0% |
| ! | CGGGGATGAATTTGAAACTA+GGG | - | chr5.3:52180594-52180613 | MS.gene049978:intron | 40.0% |
| ! | GAATTTGAAACTAGGGGCTT+AGG | - | chr5.3:52180601-52180620 | MS.gene049978:intron | 40.0% |
| ! | GGGGATGAATTTGAAACTAG+GGG | - | chr5.3:52180595-52180614 | MS.gene049978:intron | 40.0% |
| ! | GTCCAGAACGATTTTACAAG+AGG | - | chr5.3:52182073-52182092 | MS.gene049978:CDS | 40.0% |
| ! | TCAAGGAGGTATGTAGTGTT+AGG | - | chr5.3:52180921-52180940 | MS.gene049978:intron | 40.0% |
| ! | TCGGGGATGAATTTGAAACT+AGG | - | chr5.3:52180593-52180612 | MS.gene049978:intron | 40.0% |
| ! | TGTGTCATCCTAGTCTTTCA+AGG | - | chr5.3:52181402-52181421 | MS.gene049978:intron | 40.0% |
| !! | TATAGAAACCCGGTTTGGAA+TGG | - | chr5.3:52181712-52181731 | MS.gene049978:intron | 40.0% |
| !! | TTGGACTTGCTAAAAACAGC+AGG | + | chr5.3:52182222-52182241 | None:intergenic | 40.0% |
| AAAGGAGTCCTGTTCATGTC+CGG | - | chr5.3:52179405-52179424 | MS.gene049978:CDS | 45.0% | |
| AAATCGTGATTTCCCGCAAC+CGG | - | chr5.3:52180247-52180266 | MS.gene049978:intron | 45.0% | |
| AATACTGGATAGAGGGATCC+TGG | - | chr5.3:52179721-52179740 | MS.gene049978:CDS | 45.0% | |
| AATCTACACAGCGATCAGAG+TGG | + | chr5.3:52181585-52181604 | None:intergenic | 45.0% | |
| ACAGAAGCCATGTTTCAGGA+CGG | - | chr5.3:52181992-52182011 | MS.gene049978:intron | 45.0% | |
| ACCACAACCACTGTCTTCAT+TGG | + | chr5.3:52182055-52182074 | None:intergenic | 45.0% | |
| ACCTATTGCTCCTGCCTTAA+AGG | - | chr5.3:52180954-52180973 | MS.gene049978:intron | 45.0% | |
| ACGACATTGTCACGTTGACA+CGG | - | chr5.3:52179627-52179646 | MS.gene049978:CDS | 45.0% | |
| AGTCCTAGGTTTGAATCACC+AGG | - | chr5.3:52181796-52181815 | MS.gene049978:intron | 45.0% | |
| ATACTGGATAGAGGGATCCT+GGG | - | chr5.3:52179722-52179741 | MS.gene049978:CDS | 45.0% | |
| ATGGAAGGGAGAAGAGAGAA+AGG | - | chr5.3:52180111-52180130 | MS.gene049978:intron | 45.0% | |
| CAAATCAGTCTCCAGCATTC+AGG | - | chr5.3:52181920-52181939 | MS.gene049978:intron | 45.0% | |
| CAATGTCGTAGTGTCTGTGT+CGG | + | chr5.3:52179616-52179635 | None:intergenic | 45.0% | |
| CCATCATACAACTTTGCACC+AGG | - | chr5.3:52181823-52181842 | MS.gene049978:intron | 45.0% | |
| CCTGGTGCAAAGTTGTATGA+TGG | + | chr5.3:52181826-52181845 | None:intergenic | 45.0% | |
| CGGAGGATACAAAGAGAGAA+TGG | - | chr5.3:52180149-52180168 | MS.gene049978:intron | 45.0% | |
| CTAACCTAGGCAGTCAATCT+CGG | + | chr5.3:52180404-52180423 | None:intergenic | 45.0% | |
| CTGAATGCTGGAGACTGATT+TGG | + | chr5.3:52181922-52181941 | None:intergenic | 45.0% | |
| GAATGCTGTGACGAAAACTC+GGG | + | chr5.3:52179476-52179495 | None:intergenic | 45.0% | |
| GCTCCTGCCTTAAAGGTTTA+CGG | - | chr5.3:52180961-52180980 | MS.gene049978:intron | 45.0% | |
| GGACAAGGATCAAGTTCTCA+TGG | - | chr5.3:52182021-52182040 | MS.gene049978:CDS | 45.0% | |
| GGAGAAGAGAGAAAGGGTTT+AGG | - | chr5.3:52180118-52180137 | MS.gene049978:intron | 45.0% | |
| GGCAGGAGCAATAGGTATAT+TGG | + | chr5.3:52180950-52180969 | None:intergenic | 45.0% | |
| GGTGATTCAAACCTAGGACT+TGG | + | chr5.3:52181796-52181815 | None:intergenic | 45.0% | |
| GTAGGACTGTCCACTTAACT+CGG | - | chr5.3:52179578-52179597 | MS.gene049978:CDS | 45.0% | |
| GTGGTACTTATCCAAGTCCT+AGG | - | chr5.3:52181782-52181801 | MS.gene049978:intron | 45.0% | |
| TAACCTTCTAAACCTGGGTC+AGG | + | chr5.3:52181143-52181162 | None:intergenic | 45.0% | |
| TATATAAGGATGCCTGACCC+AGG | - | chr5.3:52181128-52181147 | MS.gene049978:intron | 45.0% | |
| TCCAATGAAGACAGTGGTTG+TGG | - | chr5.3:52182051-52182070 | MS.gene049978:CDS | 45.0% | |
| TGCAAATCCCAGTCCATTTC+TGG | + | chr5.3:52180319-52180338 | None:intergenic | 45.0% | |
| TGCAAGAACACTAGGTGTAC+TGG | + | chr5.3:52179291-52179310 | None:intergenic | 45.0% | |
| TGGAAGGGAGAAGAGAGAAA+GGG | - | chr5.3:52180112-52180131 | MS.gene049978:intron | 45.0% | |
| TTGCACCAGGCATGAATCAA+TGG | - | chr5.3:52181836-52181855 | MS.gene049978:intron | 45.0% | |
| TTTCCATTACGTCCATCAGG+TGG | - | chr5.3:52181760-52181779 | MS.gene049978:intron | 45.0% | |
| ! | CAATCTCGGCCAATTTTGGA+CGG | + | chr5.3:52180390-52180409 | None:intergenic | 45.0% |
| ! | CAGTCAATCTCGGCCAATTT+TGG | + | chr5.3:52180394-52180413 | None:intergenic | 45.0% |
| ! | CCCGTCACAGTTTTTCACTT+AGG | - | chr5.3:52180341-52180360 | MS.gene049978:intron | 45.0% |
| ! | GAGTTTTCGTCACAGCATTC+AGG | - | chr5.3:52179476-52179495 | MS.gene049978:CDS | 45.0% |
| !! | AAGTTGTATGATGGACTGCC+TGG | + | chr5.3:52181817-52181836 | None:intergenic | 45.0% |
| !! | ACCTTTAAGGCAGGAGCAAT+AGG | + | chr5.3:52180958-52180977 | None:intergenic | 45.0% |
| !! | GACTTGCTAAAAACAGCAGG+CGG | + | chr5.3:52182219-52182238 | None:intergenic | 45.0% |
| !! | AATATAAACAAAAATAAAAA+AGG | + | chr5.3:52181472-52181491 | None:intergenic | 5.0% |
| ACCAAGCCTTGCTGAGTACT+TGG | - | chr5.3:52182248-52182267 | MS.gene049978:CDS | 50.0% | |
| ACCGGGTTTCTATAGGGTGT+TGG | + | chr5.3:52181706-52181725 | None:intergenic | 50.0% | |
| AGAAGCCATGTTTCAGGACG+GGG | - | chr5.3:52181994-52182013 | MS.gene049978:intron | 50.0% | |
| ATAGAGGGATCCTGGGTAGT+GGG | - | chr5.3:52179729-52179748 | MS.gene049978:CDS | 50.0% | |
| ATGCCTGACCCAGGTTTAGA+AGG | - | chr5.3:52181137-52181156 | MS.gene049978:intron | 50.0% | |
| CACCCTATAGAAACCCGGTT+TGG | - | chr5.3:52181707-52181726 | MS.gene049978:intron | 50.0% | |
| CAGAAGCCATGTTTCAGGAC+GGG | - | chr5.3:52181993-52182012 | MS.gene049978:intron | 50.0% | |
| CCTCTAGGTCCATTCCAAAC+CGG | + | chr5.3:52181724-52181743 | None:intergenic | 50.0% | |
| CCTTGCTGAGTACTTGGCTT+CGG | - | chr5.3:52182254-52182273 | MS.gene049978:CDS | 50.0% | |
| CGACATTGTCACGTTGACAC+GGG | - | chr5.3:52179628-52179647 | MS.gene049978:CDS | 50.0% | |
| CTCTAGGTCCATTCCAAACC+GGG | + | chr5.3:52181723-52181742 | None:intergenic | 50.0% | |
| CTGCCTGGTGATTCAAACCT+AGG | + | chr5.3:52181802-52181821 | None:intergenic | 50.0% | |
| GATCAAGTTCTCATGGTCGC+TGG | - | chr5.3:52182028-52182047 | MS.gene049978:CDS | 50.0% | |
| GATCGTGCTCAAGATTCTGG+TGG | - | chr5.3:52179257-52179276 | MS.gene049978:CDS | 50.0% | |
| GCCAACACCCTATAGAAACC+CGG | - | chr5.3:52181702-52181721 | MS.gene049978:intron | 50.0% | |
| GCTGATCGTGCTCAAGATTC+TGG | - | chr5.3:52179254-52179273 | MS.gene049978:CDS | 50.0% | |
| GGATAAGTACCACCACCTGA+TGG | + | chr5.3:52181775-52181794 | None:intergenic | 50.0% | |
| TTATACTGAGGAGGGCCTCT+AGG | + | chr5.3:52181739-52181758 | None:intergenic | 50.0% | |
| TTTAGAGGAAGAGGAGGAGG+AGG | + | chr5.3:52179446-52179465 | None:intergenic | 50.0% | |
| TTTCCACGGATCTTCGACCA+TGG | + | chr5.3:52182100-52182119 | None:intergenic | 50.0% | |
| ! | AGCAAGGCTTGGTCCAGAAT+TGG | + | chr5.3:52182241-52182260 | None:intergenic | 50.0% |
| ! | CTGCGAACCAGAAATGGACT+GGG | - | chr5.3:52180309-52180328 | MS.gene049978:intron | 50.0% |
| ! | GCTCAAGATTCTGGTGGTGA+AGG | - | chr5.3:52179263-52179282 | MS.gene049978:CDS | 50.0% |
| ! | GGGTTTAGGGTTGAAAACGG+AGG | - | chr5.3:52180132-52180151 | MS.gene049978:intron | 50.0% |
| ! | GTTTAGGGTGAACTGAGCGA+AGG | - | chr5.3:52180046-52180065 | MS.gene049978:intron | 50.0% |
| !! | CTGCCGTAAACCTTTAAGGC+AGG | + | chr5.3:52180967-52180986 | None:intergenic | 50.0% |
| !! | GGTGTTGGCAATGCTTGAGT+GGG | + | chr5.3:52181691-52181710 | None:intergenic | 50.0% |
| !! | TTGGGCCATTGATTCATGCC+TGG | + | chr5.3:52181844-52181863 | None:intergenic | 50.0% |
| AAGCGGCTGCGAACCAGAAA+TGG | - | chr5.3:52180303-52180322 | MS.gene049978:intron | 55.0% | |
| ACCCGATCTCCCACCTAAAG+CGG | - | chr5.3:52180286-52180305 | MS.gene049978:intron | 55.0% | |
| AGGGGTCAACCCTTGTTGCT+TGG | - | chr5.3:52181099-52181118 | MS.gene049978:intron | 55.0% | |
| CACTACCCCGTCCTGAAACA+TGG | + | chr5.3:52182002-52182021 | None:intergenic | 55.0% | |
| CATGTTTCAGGACGGGGTAG+TGG | - | chr5.3:52182000-52182019 | MS.gene049978:intron | 55.0% | |
| CCATTACGTCCATCAGGTGG+TGG | - | chr5.3:52181763-52181782 | MS.gene049978:intron | 55.0% | |
| CCGAAGCCAAGTACTCAGCA+AGG | + | chr5.3:52182257-52182276 | None:intergenic | 55.0% | |
| CCTTTGTGATCCCACTACCC+AGG | + | chr5.3:52179742-52179761 | None:intergenic | 55.0% | |
| CGCTGGTCCAATGAAGACAG+TGG | - | chr5.3:52182045-52182064 | MS.gene049978:CDS | 55.0% | |
| CTCCGGGATCCGTCCAAAAT+TGG | - | chr5.3:52180378-52180397 | MS.gene049978:intron | 55.0% | |
| GATAGAGGGATCCTGGGTAG+TGG | - | chr5.3:52179728-52179747 | MS.gene049978:CDS | 55.0% | |
| GCCAAGTACTCAGCAAGGCT+TGG | + | chr5.3:52182252-52182271 | None:intergenic | 55.0% | |
| GCTGCGAACCAGAAATGGAC+TGG | - | chr5.3:52180308-52180327 | MS.gene049978:intron | 55.0% | |
| GGCAATGCTTGAGTGGGAGA+TGG | + | chr5.3:52181685-52181704 | None:intergenic | 55.0% | |
| GTGGGAGATGGAGACATCTG+CGG | + | chr5.3:52181673-52181692 | None:intergenic | 55.0% | |
| TAGGGTGAACTGAGCGAAGG+CGG | - | chr5.3:52180049-52180068 | MS.gene049978:intron | 55.0% | |
| TTGGCCGAGATTGACTGCCT+AGG | - | chr5.3:52180397-52180416 | MS.gene049978:intron | 55.0% | |
| ! | AGCCGCTTTAGGTGGGAGAT+CGG | + | chr5.3:52180291-52180310 | None:intergenic | 55.0% |
| ! | CAATTTTGGACGGATCCCGG+AGG | + | chr5.3:52180380-52180399 | None:intergenic | 55.0% |
| ! | CCACCACCTGATGGACGTAA+TGG | + | chr5.3:52181766-52181785 | None:intergenic | 55.0% |
| ! | GGCCAATTTTGGACGGATCC+CGG | + | chr5.3:52180383-52180402 | None:intergenic | 55.0% |
| ! | GGGGTCAACCCTTGTTGCTT+GGG | - | chr5.3:52181100-52181119 | MS.gene049978:intron | 55.0% |
| ! | GTCAACCCTTGTTGCTTGGG+AGG | - | chr5.3:52181103-52181122 | MS.gene049978:intron | 55.0% |
| !! | CCGGTTTGGAATGGACCTAG+AGG | - | chr5.3:52181721-52181740 | MS.gene049978:intron | 55.0% |
| !! | CCTGGGTAGTGGGATCACAA+AGG | - | chr5.3:52179739-52179758 | MS.gene049978:CDS | 55.0% |
| !! | GGGTGTTGGCAATGCTTGAG+TGG | + | chr5.3:52181692-52181711 | None:intergenic | 55.0% |
| !! | TTCTGGTTCGCAGCCGCTTT+AGG | + | chr5.3:52180302-52180321 | None:intergenic | 55.0% |
| AGAGGAAGAGGAGGAGGAGG+TGG | + | chr5.3:52179443-52179462 | None:intergenic | 60.0% | |
| CCTAACTCTAGTCGAGGGCG+AGG | - | chr5.3:52181949-52181968 | MS.gene049978:intron | 60.0% | |
| CCTCGCCCTCGACTAGAGTT+AGG | + | chr5.3:52181952-52181971 | None:intergenic | 60.0% | |
| GAGTCCTGTTCATGTCCGGC+CGG | - | chr5.3:52179409-52179428 | MS.gene049978:CDS | 60.0% | |
| GGAGGAGGTGGCAAATGCTC+CGG | + | chr5.3:52179431-52179450 | None:intergenic | 60.0% | |
| GGTCCATGGTCGAAGATCCG+TGG | - | chr5.3:52182094-52182113 | MS.gene049978:CDS | 60.0% | |
| TAGGTGGGAGATCGGGTTCC+CGG | + | chr5.3:52180283-52180302 | None:intergenic | 60.0% | |
| ! | GCCGCTTTAGGTGGGAGATC+GGG | + | chr5.3:52180290-52180309 | None:intergenic | 60.0% |
| ! | GGTTCGCAGCCGCTTTAGGT+GGG | + | chr5.3:52180298-52180317 | None:intergenic | 60.0% |
| ! | TGGTTCGCAGCCGCTTTAGG+TGG | + | chr5.3:52180299-52180318 | None:intergenic | 60.0% |
| !! | TCAGGACGGGGTAGTGGACA+AGG | - | chr5.3:52182006-52182025 | MS.gene049978:intron | 60.0% |
| AAGGCGGTGGTGAAGGAGGG+CGG | - | chr5.3:52180065-52180084 | MS.gene049978:intron | 65.0% | |
| ACTCTAGTCGAGGGCGAGGC+AGG | - | chr5.3:52181953-52181972 | MS.gene049978:intron | 65.0% | |
| AGCGAAGGCGGTGGTGAAGG+AGG | - | chr5.3:52180061-52180080 | MS.gene049978:intron | 65.0% | |
| CGCAACCGGAGCATGCGAAC+CGG | - | chr5.3:52180261-52180280 | MS.gene049978:intron | 65.0% | |
| CGGTTCGCATGCTCCGGTTG+CGG | + | chr5.3:52180263-52180282 | None:intergenic | 65.0% | |
| CTCTAGTCGAGGGCGAGGCA+GGG | - | chr5.3:52181954-52181973 | MS.gene049978:intron | 65.0% | |
| CTGAGCGAAGGCGGTGGTGA+AGG | - | chr5.3:52180058-52180077 | MS.gene049978:intron | 65.0% | |
| GAGGTGGCAAATGCTCCGGC+CGG | + | chr5.3:52179427-52179446 | None:intergenic | 65.0% | |
| GCAACCGGAGCATGCGAACC+GGG | - | chr5.3:52180262-52180281 | MS.gene049978:intron | 65.0% | |
| GCGAAGGCGGTGGTGAAGGA+GGG | - | chr5.3:52180062-52180081 | MS.gene049978:intron | 65.0% | |
| GGTGAACTGAGCGAAGGCGG+TGG | - | chr5.3:52180052-52180071 | MS.gene049978:intron | 65.0% | |
| GGTTCGCATGCTCCGGTTGC+GGG | + | chr5.3:52180262-52180281 | None:intergenic | 65.0% | |
| TCTAGTCGAGGGCGAGGCAG+GGG | - | chr5.3:52181955-52181974 | MS.gene049978:intron | 65.0% | |
| TGCTCCGGCCGGACATGAAC+AGG | + | chr5.3:52179416-52179435 | None:intergenic | 65.0% | |
| TTGGACGGATCCCGGAGGAG+CGG | + | chr5.3:52180375-52180394 | None:intergenic | 65.0% | |
| ! | GGTTCCCGGTTCGCATGCTC+CGG | + | chr5.3:52180269-52180288 | None:intergenic | 65.0% |
| GAGGGCGAGGCAGGGGATTC+TGG | - | chr5.3:52181962-52181981 | MS.gene049978:intron | 70.0% | |
| ! | AGGTGTGCGTGCCGCTCCTC+CGG | - | chr5.3:52180361-52180380 | MS.gene049978:intron | 70.0% |
| GCGGTGGTGAAGGAGGGCGG+CGG | - | chr5.3:52180068-52180087 | MS.gene049978:intron | 75.0% | |
| GTGGTGAAGGAGGGCGGCGG+AGG | - | chr5.3:52180071-52180090 | MS.gene049978:intron | 75.0% | |
| ! | GGTGTGCGTGCCGCTCCTCC+GGG | - | chr5.3:52180362-52180381 | MS.gene049978:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 52179203 | 52182314 | 52179203 | ID=MS.gene049978 |
| chr5.3 | mRNA | 52179203 | 52182314 | 52179203 | ID=MS.gene049978.t1;Parent=MS.gene049978 |
| chr5.3 | exon | 52182020 | 52182314 | 52182020 | ID=MS.gene049978.t1.exon1;Parent=MS.gene049978.t1 |
| chr5.3 | CDS | 52182020 | 52182314 | 52182020 | ID=cds.MS.gene049978.t1;Parent=MS.gene049978.t1 |
| chr5.3 | exon | 52179203 | 52179858 | 52179203 | ID=MS.gene049978.t1.exon2;Parent=MS.gene049978.t1 |
| chr5.3 | CDS | 52179203 | 52179858 | 52179203 | ID=cds.MS.gene049978.t1;Parent=MS.gene049978.t1 |
| Gene Sequence |
| Protein sequence |
