Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049980.t1 | XP_024640872.1 | 89.6 | 318 | 27 | 3 | 1 | 313 | 1 | 317 | 2.60E-144 | 521.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049980.t1 | Q9SB47 | 30.3 | 340 | 190 | 10 | 1 | 315 | 1 | 318 | 8.3e-14 | 79.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049980.t1 | G7JYE9 | 89.6 | 318 | 27 | 3 | 1 | 313 | 1 | 317 | 1.9e-144 | 521.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049978 | MS.gene049980 | 0.994722 | 1.24E-209 | -1.69E-46 |
| MS.gene049980 | MS.gene21312 | 0.923642 | 2.03E-89 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049980.t1 | MTR_5g066450 | 91.195 | 318 | 22 | 3 | 1 | 313 | 1 | 317 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 96 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAGAAATATTTGGATTA+TGG | 0.170990 | 5.3:+52171024 | None:intergenic |
| ATATATTCTGAAGAAATATT+TGG | 0.172105 | 5.3:+52171017 | None:intergenic |
| GAGGGCGAGGCAGGGGATTC+TGG | 0.243119 | 5.3:-52170926 | MS.gene049980:CDS |
| CAAAATCTACAAGTACAAAA+AGG | 0.267103 | 5.3:-52170701 | MS.gene049980:CDS |
| TGAATGCATTCTCCGATAAA+AGG | 0.308337 | 5.3:-52173501 | MS.gene049980:CDS |
| GCTGATCGTGCTCAAGATTC+TGG | 0.314709 | 5.3:-52173634 | MS.gene049980:CDS |
| CAAATCAGTCTCCAGCATTC+AGG | 0.337696 | 5.3:-52170968 | MS.gene049980:CDS |
| TTCCAAACCGGGTTTCTATA+GGG | 0.348407 | 5.3:+52171179 | None:intergenic |
| CTGAATGCTGGAGACTGATT+TGG | 0.356018 | 5.3:+52170969 | None:intergenic |
| ATTCCAAACCGGGTTTCTAT+AGG | 0.356290 | 5.3:+52171178 | None:intergenic |
| ACCAAGCCTTGCTGAGTACT+TGG | 0.365165 | 5.3:-52170640 | MS.gene049980:CDS |
| GACCTCTTGTAAAATCGTTC+TGG | 0.369590 | 5.3:+52170813 | None:intergenic |
| AGCAAGGCTTGGTCCAGAAT+TGG | 0.370128 | 5.3:+52170650 | None:intergenic |
| CTATATTCTGAAGCAGGAAT+TGG | 0.374109 | 5.3:+52170993 | None:intergenic |
| ATCGTTGAATACCATATAAT+AGG | 0.376974 | 5.3:+52170759 | None:intergenic |
| TTATCGGAGAATGCATTCAT+TGG | 0.385702 | 5.3:+52173505 | None:intergenic |
| TGCTCCGGCCGGACATGAAC+AGG | 0.401487 | 5.3:+52173475 | None:intergenic |
| ACCACAACCACTGTCTTCAT+TGG | 0.403576 | 5.3:+52170836 | None:intergenic |
| AGAGGAAGAGGAGGAGGAGG+TGG | 0.406002 | 5.3:+52173448 | None:intergenic |
| GAAATATTTGGATTATGGTT+GGG | 0.406081 | 5.3:+52171029 | None:intergenic |
| AACAACAGAAGCCATGTTTC+AGG | 0.410490 | 5.3:-52170900 | MS.gene049980:CDS |
| ACTCTAGTCGAGGGCGAGGC+AGG | 0.422136 | 5.3:-52170935 | MS.gene049980:CDS |
| CCTCGCCCTCGACTAGAGTT+AGG | 0.437061 | 5.3:+52170939 | None:intergenic |
| TTTAGAGGAAGAGGAGGAGG+AGG | 0.447022 | 5.3:+52173445 | None:intergenic |
| AACTTTCCATTACGTCCATC+AGG | 0.451990 | 5.3:-52171131 | MS.gene049980:CDS |
| AGAAATATTTGGATTATGGT+TGG | 0.454619 | 5.3:+52171028 | None:intergenic |
| AACTCGGGAACAAAATTTAG+AGG | 0.455286 | 5.3:+52173430 | None:intergenic |
| CCTCTAGGTCCATTCCAAAC+CGG | 0.456547 | 5.3:+52171167 | None:intergenic |
| TTAGGATTGTTCCTGAATGC+TGG | 0.468362 | 5.3:+52170957 | None:intergenic |
| TGCAAGAACACTAGGTGTAC+TGG | 0.469110 | 5.3:+52173600 | None:intergenic |
| GTGGTACTTATCCAAGTCCT+AGG | 0.471418 | 5.3:-52171106 | MS.gene049980:CDS |
| CTCTAGGTCCATTCCAAACC+GGG | 0.476742 | 5.3:+52171168 | None:intergenic |
| TTGCACCAGGCATGAATCAA+TGG | 0.477134 | 5.3:-52171052 | MS.gene049980:CDS |
| CCTTGCTGAGTACTTGGCTT+CGG | 0.480630 | 5.3:-52170634 | MS.gene049980:CDS |
| CACCCTATAGAAACCCGGTT+TGG | 0.486436 | 5.3:-52171181 | MS.gene049980:CDS |
| CATGTTTCAGGACGGGGTAG+TGG | 0.496188 | 5.3:-52170888 | MS.gene049980:CDS |
| TGAATGCTGTGACGAAAACT+CGG | 0.497237 | 5.3:+52173414 | None:intergenic |
| AAAGGAGTCCTGTTCATGTC+CGG | 0.499050 | 5.3:-52173483 | MS.gene049980:CDS |
| TCTAGTCGAGGGCGAGGCAG+GGG | 0.500795 | 5.3:-52170933 | MS.gene049980:CDS |
| TTTGGACTATATTCTGAAGC+AGG | 0.501364 | 5.3:+52170987 | None:intergenic |
| GGAGGAGGTGGCAAATGCTC+CGG | 0.505617 | 5.3:+52173460 | None:intergenic |
| AAATTTAGAGGAAGAGGAGG+AGG | 0.507025 | 5.3:+52173442 | None:intergenic |
| TTATACTGAGGAGGGCCTCT+AGG | 0.509258 | 5.3:+52171152 | None:intergenic |
| TTGGGCCATTGATTCATGCC+TGG | 0.515424 | 5.3:+52171047 | None:intergenic |
| GGTGATTCAAACCTAGGACT+TGG | 0.517232 | 5.3:+52171095 | None:intergenic |
| CAGAAGCCATGTTTCAGGAC+GGG | 0.517719 | 5.3:-52170895 | MS.gene049980:CDS |
| GCCAAGTACTCAGCAAGGCT+TGG | 0.520790 | 5.3:+52170639 | None:intergenic |
| TCCAATGAAGACAGTGGTTG+TGG | 0.522840 | 5.3:-52170837 | MS.gene049980:CDS |
| ACAAAATTTAGAGGAAGAGG+AGG | 0.525858 | 5.3:+52173439 | None:intergenic |
| GGAACAAAATTTAGAGGAAG+AGG | 0.527833 | 5.3:+52173436 | None:intergenic |
| GTTGAAGAATCTTCAGCCAA+TGG | 0.529369 | 5.3:+52173574 | None:intergenic |
| CTCTAGTCGAGGGCGAGGCA+GGG | 0.530316 | 5.3:-52170934 | MS.gene049980:CDS |
| ACCGGGTTTCTATAGGGTGT+TGG | 0.539818 | 5.3:+52171185 | None:intergenic |
| ACAAAGAAAGAAACGGTTGA+AGG | 0.541768 | 5.3:-52173671 | MS.gene049980:CDS |
| GCTCAAGATTCTGGTGGTGA+AGG | 0.542553 | 5.3:-52173625 | MS.gene049980:CDS |
| CTGCCTGGTGATTCAAACCT+AGG | 0.548534 | 5.3:+52171089 | None:intergenic |
| TCTGTATAGTAATTAAATCT+CGG | 0.550622 | 5.3:+52173529 | None:intergenic |
| TATAGAAACCCGGTTTGGAA+TGG | 0.550677 | 5.3:-52171176 | MS.gene049980:CDS |
| CACTACCCCGTCCTGAAACA+TGG | 0.553581 | 5.3:+52170889 | None:intergenic |
| ATTCAGAACAAAGAAAGAAA+CGG | 0.553697 | 5.3:-52173678 | MS.gene049980:CDS |
| TAGTGTTCTTGCAAATCCAT+TGG | 0.559128 | 5.3:-52173590 | MS.gene049980:CDS |
| CCATTACGTCCATCAGGTGG+TGG | 0.559408 | 5.3:-52171125 | MS.gene049980:CDS |
| TTTCCACGGATCTTCGACCA+TGG | 0.559648 | 5.3:+52170791 | None:intergenic |
| AATGGATTTGCAAGAACACT+AGG | 0.560524 | 5.3:+52173592 | None:intergenic |
| CCACCACCTGATGGACGTAA+TGG | 0.561664 | 5.3:+52171125 | None:intergenic |
| AACAATCCTAACTCTAGTCG+AGG | 0.563734 | 5.3:-52170945 | MS.gene049980:CDS |
| CCTAACTCTAGTCGAGGGCG+AGG | 0.567720 | 5.3:-52170939 | MS.gene049980:CDS |
| CCATCATACAACTTTGCACC+AGG | 0.567805 | 5.3:-52171065 | MS.gene049980:CDS |
| GATCAAGTTCTCATGGTCGC+TGG | 0.572945 | 5.3:-52170860 | MS.gene049980:CDS |
| TCAGGACGGGGTAGTGGACA+AGG | 0.574030 | 5.3:-52170882 | MS.gene049980:CDS |
| GGCAATGCTTGAGTGGGAGA+TGG | 0.579037 | 5.3:+52171206 | None:intergenic |
| AAGTTGTATGATGGACTGCC+TGG | 0.584395 | 5.3:+52171074 | None:intergenic |
| CCTGGTGCAAAGTTGTATGA+TGG | 0.585843 | 5.3:+52171065 | None:intergenic |
| AGAAGCCATGTTTCAGGACG+GGG | 0.589396 | 5.3:-52170894 | MS.gene049980:CDS |
| TTCTTCAACTGTGTTATCAG+CGG | 0.590156 | 5.3:-52173560 | MS.gene049980:CDS |
| AGTCCTAGGTTTGAATCACC+AGG | 0.592057 | 5.3:-52171092 | MS.gene049980:CDS |
| GGACAAGGATCAAGTTCTCA+TGG | 0.593437 | 5.3:-52170867 | MS.gene049980:CDS |
| GGGTGTTGGCAATGCTTGAG+TGG | 0.598136 | 5.3:+52171199 | None:intergenic |
| GAGTCCTGTTCATGTCCGGC+CGG | 0.598203 | 5.3:-52173479 | MS.gene049980:CDS |
| ATGGAAAGTTATACTGAGGA+GGG | 0.600848 | 5.3:+52171144 | None:intergenic |
| AATGGAAAGTTATACTGAGG+AGG | 0.613089 | 5.3:+52171143 | None:intergenic |
| GGTCCATGGTCGAAGATCCG+TGG | 0.620332 | 5.3:-52170794 | MS.gene049980:CDS |
| GCCAACACCCTATAGAAACC+CGG | 0.621280 | 5.3:-52171186 | MS.gene049980:CDS |
| GAGGTGGCAAATGCTCCGGC+CGG | 0.628444 | 5.3:+52173464 | None:intergenic |
| GAATGCTGTGACGAAAACTC+GGG | 0.629007 | 5.3:+52173415 | None:intergenic |
| GGATAAGTACCACCACCTGA+TGG | 0.630693 | 5.3:+52171116 | None:intergenic |
| ACAGAAGCCATGTTTCAGGA+CGG | 0.632034 | 5.3:-52170896 | MS.gene049980:CDS |
| CCGAAGCCAAGTACTCAGCA+AGG | 0.648916 | 5.3:+52170634 | None:intergenic |
| CGTAATGGAAAGTTATACTG+AGG | 0.666525 | 5.3:+52171140 | None:intergenic |
| ACAATCCTAACTCTAGTCGA+GGG | 0.667093 | 5.3:-52170944 | MS.gene049980:CDS |
| GATCGTGCTCAAGATTCTGG+TGG | 0.668441 | 5.3:-52173631 | MS.gene049980:CDS |
| TTTCCATTACGTCCATCAGG+TGG | 0.670092 | 5.3:-52171128 | MS.gene049980:CDS |
| GTGGGAGATGGAGACATCTG+CGG | 0.673802 | 5.3:+52171218 | None:intergenic |
| GGTGTTGGCAATGCTTGAGT+GGG | 0.676495 | 5.3:+52171200 | None:intergenic |
| CCGGTTTGGAATGGACCTAG+AGG | 0.693305 | 5.3:-52171167 | MS.gene049980:CDS |
| CGCTGGTCCAATGAAGACAG+TGG | 0.716351 | 5.3:-52170843 | MS.gene049980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAGTTAAATACTCAATT+AGG | - | chr5.3:52170937-52170956 | MS.gene049980:CDS | 15.0% |
| !!! | AATTTTTGAAACCTATTATA+TGG | - | chr5.3:52173511-52173530 | MS.gene049980:CDS | 15.0% |
| !!! | ATATATTCTGAAGAAATATT+TGG | + | chr5.3:52173267-52173286 | None:intergenic | 15.0% |
| !!! | ATTTATTTTGTTATTGTAAC+TGG | - | chr5.3:52172558-52172577 | MS.gene049980:intron | 15.0% |
| !!! | TTAACATTTTAACTGTTTTT+TGG | - | chr5.3:52172401-52172420 | MS.gene049980:intron | 15.0% |
| !!! | TTTTTTTTTGTTTGTTACAT+TGG | + | chr5.3:52171290-52171309 | None:intergenic | 15.0% |
| !! | AAAATCTACAAGTACAAAAA+GGG | - | chr5.3:52173581-52173600 | MS.gene049980:CDS | 20.0% |
| !! | ATTAAGATATGATTGAATTG+AGG | - | chr5.3:52172882-52172901 | MS.gene049980:intron | 20.0% |
| !! | ATTATTATAGCAATGCATAT+TGG | - | chr5.3:52172175-52172194 | MS.gene049980:intron | 20.0% |
| !! | CTTCAAACTATATATTTGAA+GGG | + | chr5.3:52172243-52172262 | None:intergenic | 20.0% |
| !! | TCAGGTTAAATTAATATCTT+CGG | + | chr5.3:52172714-52172733 | None:intergenic | 20.0% |
| !! | TCTGTATAGTAATTAAATCT+CGG | + | chr5.3:52170755-52170774 | None:intergenic | 20.0% |
| !! | TCTTCAAACTATATATTTGA+AGG | + | chr5.3:52172244-52172263 | None:intergenic | 20.0% |
| !! | TTTATAATTTGACTCTATCA+AGG | - | chr5.3:52172297-52172316 | MS.gene049980:intron | 20.0% |
| ! | AACAAAACAAATAGGGTTTA+GGG | - | chr5.3:52171424-52171443 | MS.gene049980:intron | 25.0% |
| ! | AATAAAGTCCGTCATTATAT+GGG | - | chr5.3:52171923-52171942 | MS.gene049980:intron | 25.0% |
| ! | AATTAGGTTACTGAAATTGT+AGG | - | chr5.3:52170953-52170972 | MS.gene049980:CDS | 25.0% |
| ! | AGAAATATTTGGATTATGGT+TGG | + | chr5.3:52173256-52173275 | None:intergenic | 25.0% |
| ! | AGAGAAGAACAAAACAAATA+GGG | - | chr5.3:52171417-52171436 | MS.gene049980:intron | 25.0% |
| ! | ATAGGTTTCAAAAATTTCCA+CGG | + | chr5.3:52173507-52173526 | None:intergenic | 25.0% |
| ! | ATCGTTGAATACCATATAAT+AGG | + | chr5.3:52173525-52173544 | None:intergenic | 25.0% |
| ! | ATCTTCGGTATATTATTAGA+GGG | + | chr5.3:52172699-52172718 | None:intergenic | 25.0% |
| ! | ATGACGATGATGATTTATTA+GGG | - | chr5.3:52170908-52170927 | MS.gene049980:CDS | 25.0% |
| ! | ATTCAGAACAAAGAAAGAAA+CGG | - | chr5.3:52170603-52170622 | MS.gene049980:CDS | 25.0% |
| ! | CAAAATCTACAAGTACAAAA+AGG | - | chr5.3:52173580-52173599 | MS.gene049980:CDS | 25.0% |
| ! | CCTTGATCAATAAAATTACA+GGG | - | chr5.3:52172627-52172646 | MS.gene049980:intron | 25.0% |
| ! | CTGAAGAAATATTTGGATTA+TGG | + | chr5.3:52173260-52173279 | None:intergenic | 25.0% |
| ! | GAAATATTTGGATTATGGTT+GGG | + | chr5.3:52173255-52173274 | None:intergenic | 25.0% |
| ! | GAAGATATTAATTTAACCTG+AGG | - | chr5.3:52172713-52172732 | MS.gene049980:intron | 25.0% |
| ! | GGACTATAATGATATTAAGT+TGG | - | chr5.3:52171955-52171974 | MS.gene049980:intron | 25.0% |
| ! | TAATAAAGTCCGTCATTATA+TGG | - | chr5.3:52171922-52171941 | MS.gene049980:intron | 25.0% |
| ! | TACAATTTCATAGACTATGT+TGG | + | chr5.3:52171896-52171915 | None:intergenic | 25.0% |
| ! | TAGAGAAGAACAAAACAAAT+AGG | - | chr5.3:52171416-52171435 | MS.gene049980:intron | 25.0% |
| ! | TATCTTCGGTATATTATTAG+AGG | + | chr5.3:52172700-52172719 | None:intergenic | 25.0% |
| ! | TTAAAATTTGAACCGTTTGA+AGG | + | chr5.3:52171615-52171634 | None:intergenic | 25.0% |
| !! | CCTGTAATTTTATTGATCAA+GGG | + | chr5.3:52172629-52172648 | None:intergenic | 25.0% |
| !! | TCAAACGGTTCAAATTTTAA+GGG | - | chr5.3:52171615-52171634 | MS.gene049980:intron | 25.0% |
| !! | TTCAAACGGTTCAAATTTTA+AGG | - | chr5.3:52171614-52171633 | MS.gene049980:intron | 25.0% |
| !!! | ATATTGATAATGTGTTGACA+AGG | - | chr5.3:52172093-52172112 | MS.gene049980:intron | 25.0% |
| !!! | TATTAAGTTGGTATTGATGT+CGG | - | chr5.3:52171967-52171986 | MS.gene049980:intron | 25.0% |
| AAATTCTAACCTTCTAAACC+TGG | + | chr5.3:52172542-52172561 | None:intergenic | 30.0% | |
| AACCGTTTGAAGGAAAATTT+GGG | + | chr5.3:52171605-52171624 | None:intergenic | 30.0% | |
| AATTCTAACCTTCTAAACCT+GGG | + | chr5.3:52172541-52172560 | None:intergenic | 30.0% | |
| ACAGAGAAGAACAATAAACA+TGG | - | chr5.3:52171329-52171348 | MS.gene049980:intron | 30.0% | |
| AGATATGATTGAATTGAGGT+CGG | - | chr5.3:52172886-52172905 | MS.gene049980:intron | 30.0% | |
| ATAATTTGACTCTATCAAGG+AGG | - | chr5.3:52172300-52172319 | MS.gene049980:intron | 30.0% | |
| CAGAGAAGAACAATAAACAT+GGG | - | chr5.3:52171330-52171349 | MS.gene049980:intron | 30.0% | |
| CCCTTGATCAATAAAATTAC+AGG | - | chr5.3:52172626-52172645 | MS.gene049980:intron | 30.0% | |
| GAACAAAACAAATAGGGTTT+AGG | - | chr5.3:52171423-52171442 | MS.gene049980:intron | 30.0% | |
| GAATAACATCAGCATAGATT+AGG | + | chr5.3:52172153-52172172 | None:intergenic | 30.0% | |
| GATGACGATGATGATTTATT+AGG | - | chr5.3:52170907-52170926 | MS.gene049980:CDS | 30.0% | |
| TAAGTTCAGGGTTATTTGTT+AGG | - | chr5.3:52172472-52172491 | MS.gene049980:intron | 30.0% | |
| TCATTATATGGGTATTTGCA+GGG | - | chr5.3:52171934-52171953 | MS.gene049980:intron | 30.0% | |
| TGCAAATACCCATATAATGA+CGG | + | chr5.3:52171934-52171953 | None:intergenic | 30.0% | |
| ! | AAGTTCAGGGTTATTTGTTA+GGG | - | chr5.3:52172473-52172492 | MS.gene049980:intron | 30.0% |
| ! | CAAACGGTTCAAATTTTAAG+GGG | - | chr5.3:52171616-52171635 | MS.gene049980:intron | 30.0% |
| ! | CCCTGTAATTTTATTGATCA+AGG | + | chr5.3:52172630-52172649 | None:intergenic | 30.0% |
| ! | TACCCAAATTTTCCTTCAAA+CGG | - | chr5.3:52171600-52171619 | MS.gene049980:intron | 30.0% |
| ! | TCATACATTTTCTTCAGTGT+TGG | + | chr5.3:52173688-52173707 | None:intergenic | 30.0% |
| ! | TTTTTGTTCCTTGAAAGACT+AGG | + | chr5.3:52172806-52172825 | None:intergenic | 30.0% |
| !! | ATTAAGTTGGTATTGATGTC+GGG | - | chr5.3:52171968-52171987 | MS.gene049980:intron | 30.0% |
| !! | GTATATTATTAGAGGGCATT+AGG | + | chr5.3:52172692-52172711 | None:intergenic | 30.0% |
| !!! | GTTTTTTGGAGTTAGATAGA+TGG | - | chr5.3:52172415-52172434 | MS.gene049980:intron | 30.0% |
| !!! | TTTTTTACCTTTTGGCAGTT+AGG | - | chr5.3:52172448-52172467 | MS.gene049980:intron | 30.0% |
| AACTCGGGAACAAAATTTAG+AGG | + | chr5.3:52170854-52170873 | None:intergenic | 35.0% | |
| AACTTATCCTAACTGCCAAA+AGG | + | chr5.3:52172458-52172477 | None:intergenic | 35.0% | |
| AATGGAAAGTTATACTGAGG+AGG | + | chr5.3:52173141-52173160 | None:intergenic | 35.0% | |
| AATGGAAATGAGGAGAGAAA+AGG | - | chr5.3:52171560-52171579 | MS.gene049980:intron | 35.0% | |
| ACAAAATTTAGAGGAAGAGG+AGG | + | chr5.3:52170845-52170864 | None:intergenic | 35.0% | |
| ACAAAGAAAGAAACGGTTGA+AGG | - | chr5.3:52170610-52170629 | MS.gene049980:CDS | 35.0% | |
| ACAAAGAGAGAATGGAAATG+AGG | - | chr5.3:52171550-52171569 | MS.gene049980:intron | 35.0% | |
| ACCTAAGTGAAAAACTGTGA+CGG | + | chr5.3:52171738-52171757 | None:intergenic | 35.0% | |
| AGAACAATAAACATGGGTGT+AGG | - | chr5.3:52171336-52171355 | MS.gene049980:intron | 35.0% | |
| ATCCTAAACAGAATACAAGC+AGG | + | chr5.3:52172218-52172237 | None:intergenic | 35.0% | |
| ATCTACAAGTACAAAAAGGG+AGG | - | chr5.3:52173584-52173603 | MS.gene049980:CDS | 35.0% | |
| ATGGAAAGTTATACTGAGGA+GGG | + | chr5.3:52173140-52173159 | None:intergenic | 35.0% | |
| ATGGAAATGAGGAGAGAAAA+GGG | - | chr5.3:52171561-52171580 | MS.gene049980:intron | 35.0% | |
| CTTAATAAGTCCGAGTTAAG+TGG | + | chr5.3:52170984-52171003 | None:intergenic | 35.0% | |
| GAACCGTTTGAAGGAAAATT+TGG | + | chr5.3:52171606-52171625 | None:intergenic | 35.0% | |
| GAATGTTTGATACGATGGAA+GGG | - | chr5.3:52171490-52171509 | MS.gene049980:intron | 35.0% | |
| GAGAAGAAACACTAGAGAAA+GGG | + | chr5.3:52172663-52172682 | None:intergenic | 35.0% | |
| GAGCTTGATTGAGTAAAGTT+TGG | - | chr5.3:52172735-52172754 | MS.gene049980:intron | 35.0% | |
| GGAACAAAATTTAGAGGAAG+AGG | + | chr5.3:52170848-52170867 | None:intergenic | 35.0% | |
| GTCATTATATGGGTATTTGC+AGG | - | chr5.3:52171933-52171952 | MS.gene049980:intron | 35.0% | |
| TAGTGTTCTTGCAAATCCAT+TGG | - | chr5.3:52170691-52170710 | MS.gene049980:CDS | 35.0% | |
| TCCTAAACAGAATACAAGCA+GGG | + | chr5.3:52172217-52172236 | None:intergenic | 35.0% | |
| TCTACAAGTACAAAAAGGGA+GGG | - | chr5.3:52173585-52173604 | MS.gene049980:CDS | 35.0% | |
| TGAATGCATTCTCCGATAAA+AGG | - | chr5.3:52170780-52170799 | MS.gene049980:CDS | 35.0% | |
| TGAATGTTTGATACGATGGA+AGG | - | chr5.3:52171489-52171508 | MS.gene049980:intron | 35.0% | |
| TGAGAAGAAACACTAGAGAA+AGG | + | chr5.3:52172664-52172683 | None:intergenic | 35.0% | |
| TGCAGATTGTAGTCTATTGA+TGG | + | chr5.3:52172273-52172292 | None:intergenic | 35.0% | |
| TGGAGTTAGATAGATGGTTA+GGG | - | chr5.3:52172421-52172440 | MS.gene049980:intron | 35.0% | |
| TGTTGTGCTATAAAGTAAGC+TGG | + | chr5.3:52172831-52172850 | None:intergenic | 35.0% | |
| TTATCGGAGAATGCATTCAT+TGG | + | chr5.3:52170779-52170798 | None:intergenic | 35.0% | |
| TTCTTCAACTGTGTTATCAG+CGG | - | chr5.3:52170721-52170740 | MS.gene049980:CDS | 35.0% | |
| TTGCTTGGGAGGTTTATATA+AGG | - | chr5.3:52172507-52172526 | MS.gene049980:intron | 35.0% | |
| TTGGAGTTAGATAGATGGTT+AGG | - | chr5.3:52172420-52172439 | MS.gene049980:intron | 35.0% | |
| ! | AAAGGGTTTAGGGTTGAAAA+CGG | - | chr5.3:52171522-52171541 | MS.gene049980:intron | 35.0% |
| ! | AATGGATTTGCAAGAACACT+AGG | + | chr5.3:52170692-52170711 | None:intergenic | 35.0% |
| ! | AGTTCAGGGTTATTTGTTAG+GGG | - | chr5.3:52172474-52172493 | MS.gene049980:intron | 35.0% |
| ! | ATGAACAGGACTCCTTTTAT+CGG | + | chr5.3:52170795-52170814 | None:intergenic | 35.0% |
| ! | CGTAATGGAAAGTTATACTG+AGG | + | chr5.3:52173144-52173163 | None:intergenic | 35.0% |
| !! | CTATATTCTGAAGCAGGAAT+TGG | + | chr5.3:52173291-52173310 | None:intergenic | 35.0% |
| !! | TTAAGTTGGTATTGATGTCG+GGG | - | chr5.3:52171969-52171988 | MS.gene049980:intron | 35.0% |
| !! | TTTGGACTATATTCTGAAGC+AGG | + | chr5.3:52173297-52173316 | None:intergenic | 35.0% |
| !!! | AGGGTCAGTTTTTTACCTTT+TGG | - | chr5.3:52172440-52172459 | MS.gene049980:intron | 35.0% |
| !!! | GTTTTTAGCAAGTCCAATTC+TGG | - | chr5.3:52173618-52173637 | MS.gene049980:CDS | 35.0% |
| AAACAGCATGACACTAACCT+AGG | + | chr5.3:52171810-52171829 | None:intergenic | 40.0% | |
| AAATTTAGAGGAAGAGGAGG+AGG | + | chr5.3:52170842-52170861 | None:intergenic | 40.0% | |
| AACAACAGAAGCCATGTTTC+AGG | - | chr5.3:52173381-52173400 | MS.gene049980:intron | 40.0% | |
| AACAATCCTAACTCTAGTCG+AGG | - | chr5.3:52173336-52173355 | MS.gene049980:intron | 40.0% | |
| AACCACTTGTGTTAGTGACT+AGG | - | chr5.3:52171086-52171105 | MS.gene049980:CDS | 40.0% | |
| AACTTTCCATTACGTCCATC+AGG | - | chr5.3:52173150-52173169 | MS.gene049980:intron | 40.0% | |
| AATGAGGAGAGAAAAGGGTT+AGG | - | chr5.3:52171566-52171585 | MS.gene049980:intron | 40.0% | |
| ACAATCCTAACTCTAGTCGA+GGG | - | chr5.3:52173337-52173356 | MS.gene049980:intron | 40.0% | |
| ACCCTGCTTGTATTCTGTTT+AGG | - | chr5.3:52172213-52172232 | MS.gene049980:intron | 40.0% | |
| AGGTAGTCAATACTGGATAG+AGG | - | chr5.3:52171106-52171125 | MS.gene049980:CDS | 40.0% | |
| AGTGACTAGGTAGTCAATAC+TGG | - | chr5.3:52171099-52171118 | MS.gene049980:CDS | 40.0% | |
| ATAAACCTCCCAAGCAACAA+GGG | + | chr5.3:52172504-52172523 | None:intergenic | 40.0% | |
| ATGAGGAGAGAAAAGGGTTA+GGG | - | chr5.3:52171567-52171586 | MS.gene049980:intron | 40.0% | |
| ATTCCAAACCGGGTTTCTAT+AGG | + | chr5.3:52173106-52173125 | None:intergenic | 40.0% | |
| CCTAAGTGAAAAACTGTGAC+GGG | + | chr5.3:52171737-52171756 | None:intergenic | 40.0% | |
| GACCTCTTGTAAAATCGTTC+TGG | + | chr5.3:52173471-52173490 | None:intergenic | 40.0% | |
| GAGAAGAGAGAAAGGGTTTA+GGG | - | chr5.3:52171512-52171531 | MS.gene049980:intron | 40.0% | |
| GCAGGAGCAATAGGTATATT+GGG | + | chr5.3:52172342-52172361 | None:intergenic | 40.0% | |
| GGTAGTCAATACTGGATAGA+GGG | - | chr5.3:52171107-52171126 | MS.gene049980:CDS | 40.0% | |
| GGTGTGAATGTTTGATACGA+TGG | - | chr5.3:52171485-52171504 | MS.gene049980:intron | 40.0% | |
| GTTGAAGAATCTTCAGCCAA+TGG | + | chr5.3:52170710-52170729 | None:intergenic | 40.0% | |
| TACCTAGTCACTAACACAAG+TGG | + | chr5.3:52171091-52171110 | None:intergenic | 40.0% | |
| TATAAACCTCCCAAGCAACA+AGG | + | chr5.3:52172505-52172524 | None:intergenic | 40.0% | |
| TCTTCTGCCGTAAACCTTTA+AGG | + | chr5.3:52172364-52172383 | None:intergenic | 40.0% | |
| TGAATGCTGTGACGAAAACT+CGG | + | chr5.3:52170870-52170889 | None:intergenic | 40.0% | |
| TGGCAGTTAGGATAAGTTCA+GGG | - | chr5.3:52172460-52172479 | MS.gene049980:intron | 40.0% | |
| TTAGGATTGTTCCTGAATGC+TGG | + | chr5.3:52173327-52173346 | None:intergenic | 40.0% | |
| TTCCAAACCGGGTTTCTATA+GGG | + | chr5.3:52173105-52173124 | None:intergenic | 40.0% | |
| TTGGCAGTTAGGATAAGTTC+AGG | - | chr5.3:52172459-52172478 | MS.gene049980:intron | 40.0% | |
| TTTACTCAATCAAGCTCCTC+AGG | + | chr5.3:52172732-52172751 | None:intergenic | 40.0% | |
| ! | ACGATTTTACAAGAGGTCCA+TGG | - | chr5.3:52173473-52173492 | MS.gene049980:CDS | 40.0% |
| ! | CGGGGATGAATTTGAAACTA+GGG | - | chr5.3:52171987-52172006 | MS.gene049980:intron | 40.0% |
| ! | GAATTTGAAACTAGGGGCTT+AGG | - | chr5.3:52171994-52172013 | MS.gene049980:intron | 40.0% |
| ! | GGGGATGAATTTGAAACTAG+GGG | - | chr5.3:52171988-52172007 | MS.gene049980:intron | 40.0% |
| ! | GTCCAGAACGATTTTACAAG+AGG | - | chr5.3:52173466-52173485 | MS.gene049980:CDS | 40.0% |
| ! | TCAAGGAGGTATGTAGTGTT+AGG | - | chr5.3:52172314-52172333 | MS.gene049980:intron | 40.0% |
| ! | TCGGGGATGAATTTGAAACT+AGG | - | chr5.3:52171986-52172005 | MS.gene049980:intron | 40.0% |
| ! | TGTGTCATCCTAGTCTTTCA+AGG | - | chr5.3:52172795-52172814 | MS.gene049980:intron | 40.0% |
| !! | TATAGAAACCCGGTTTGGAA+TGG | - | chr5.3:52173105-52173124 | MS.gene049980:intron | 40.0% |
| !! | TTGGACTTGCTAAAAACAGC+AGG | + | chr5.3:52173615-52173634 | None:intergenic | 40.0% |
| AAAGGAGTCCTGTTCATGTC+CGG | - | chr5.3:52170798-52170817 | MS.gene049980:CDS | 45.0% | |
| AAATCGTGATTTCCCGCAAC+CGG | - | chr5.3:52171640-52171659 | MS.gene049980:intron | 45.0% | |
| AATACTGGATAGAGGGATCC+TGG | - | chr5.3:52171114-52171133 | MS.gene049980:CDS | 45.0% | |
| AATCTACACAGCGATCAGAG+TGG | + | chr5.3:52172978-52172997 | None:intergenic | 45.0% | |
| ACAGAAGCCATGTTTCAGGA+CGG | - | chr5.3:52173385-52173404 | MS.gene049980:intron | 45.0% | |
| ACCACAACCACTGTCTTCAT+TGG | + | chr5.3:52173448-52173467 | None:intergenic | 45.0% | |
| ACCTATTGCTCCTGCCTTAA+AGG | - | chr5.3:52172347-52172366 | MS.gene049980:intron | 45.0% | |
| ACGACATTGTCACGTTGACA+CGG | - | chr5.3:52171020-52171039 | MS.gene049980:CDS | 45.0% | |
| AGTCCTAGGTTTGAATCACC+AGG | - | chr5.3:52173189-52173208 | MS.gene049980:intron | 45.0% | |
| ATACTGGATAGAGGGATCCT+GGG | - | chr5.3:52171115-52171134 | MS.gene049980:CDS | 45.0% | |
| ATGGAAGGGAGAAGAGAGAA+AGG | - | chr5.3:52171504-52171523 | MS.gene049980:intron | 45.0% | |
| CAAATCAGTCTCCAGCATTC+AGG | - | chr5.3:52173313-52173332 | MS.gene049980:intron | 45.0% | |
| CAATGTCGTAGTGTCTGTGT+CGG | + | chr5.3:52171009-52171028 | None:intergenic | 45.0% | |
| CCATCATACAACTTTGCACC+AGG | - | chr5.3:52173216-52173235 | MS.gene049980:intron | 45.0% | |
| CCTGGTGCAAAGTTGTATGA+TGG | + | chr5.3:52173219-52173238 | None:intergenic | 45.0% | |
| CGGAGGATACAAAGAGAGAA+TGG | - | chr5.3:52171542-52171561 | MS.gene049980:intron | 45.0% | |
| CTAACCTAGGCAGTCAATCT+CGG | + | chr5.3:52171797-52171816 | None:intergenic | 45.0% | |
| CTGAATGCTGGAGACTGATT+TGG | + | chr5.3:52173315-52173334 | None:intergenic | 45.0% | |
| GAATGCTGTGACGAAAACTC+GGG | + | chr5.3:52170869-52170888 | None:intergenic | 45.0% | |
| GCTCCTGCCTTAAAGGTTTA+CGG | - | chr5.3:52172354-52172373 | MS.gene049980:intron | 45.0% | |
| GGACAAGGATCAAGTTCTCA+TGG | - | chr5.3:52173414-52173433 | MS.gene049980:CDS | 45.0% | |
| GGAGAAGAGAGAAAGGGTTT+AGG | - | chr5.3:52171511-52171530 | MS.gene049980:intron | 45.0% | |
| GGCAGGAGCAATAGGTATAT+TGG | + | chr5.3:52172343-52172362 | None:intergenic | 45.0% | |
| GGTGATTCAAACCTAGGACT+TGG | + | chr5.3:52173189-52173208 | None:intergenic | 45.0% | |
| GTAGGACTGTCCACTTAACT+CGG | - | chr5.3:52170971-52170990 | MS.gene049980:CDS | 45.0% | |
| GTGGTACTTATCCAAGTCCT+AGG | - | chr5.3:52173175-52173194 | MS.gene049980:intron | 45.0% | |
| TAACCTTCTAAACCTGGGTC+AGG | + | chr5.3:52172536-52172555 | None:intergenic | 45.0% | |
| TATATAAGGATGCCTGACCC+AGG | - | chr5.3:52172521-52172540 | MS.gene049980:intron | 45.0% | |
| TCCAATGAAGACAGTGGTTG+TGG | - | chr5.3:52173444-52173463 | MS.gene049980:CDS | 45.0% | |
| TGCAAATCCCAGTCCATTTC+TGG | + | chr5.3:52171712-52171731 | None:intergenic | 45.0% | |
| TGCAAGAACACTAGGTGTAC+TGG | + | chr5.3:52170684-52170703 | None:intergenic | 45.0% | |
| TGGAAGGGAGAAGAGAGAAA+GGG | - | chr5.3:52171505-52171524 | MS.gene049980:intron | 45.0% | |
| TTGCACCAGGCATGAATCAA+TGG | - | chr5.3:52173229-52173248 | MS.gene049980:intron | 45.0% | |
| TTTCCATTACGTCCATCAGG+TGG | - | chr5.3:52173153-52173172 | MS.gene049980:intron | 45.0% | |
| ! | CAATCTCGGCCAATTTTGGA+CGG | + | chr5.3:52171783-52171802 | None:intergenic | 45.0% |
| ! | CAGTCAATCTCGGCCAATTT+TGG | + | chr5.3:52171787-52171806 | None:intergenic | 45.0% |
| ! | CCCGTCACAGTTTTTCACTT+AGG | - | chr5.3:52171734-52171753 | MS.gene049980:intron | 45.0% |
| ! | GAGTTTTCGTCACAGCATTC+AGG | - | chr5.3:52170869-52170888 | MS.gene049980:CDS | 45.0% |
| !! | AAGTTGTATGATGGACTGCC+TGG | + | chr5.3:52173210-52173229 | None:intergenic | 45.0% |
| !! | ACCTTTAAGGCAGGAGCAAT+AGG | + | chr5.3:52172351-52172370 | None:intergenic | 45.0% |
| !! | GACTTGCTAAAAACAGCAGG+CGG | + | chr5.3:52173612-52173631 | None:intergenic | 45.0% |
| !! | AATATAAACAAAAATAAAAA+AGG | + | chr5.3:52172865-52172884 | None:intergenic | 5.0% |
| ACCAAGCCTTGCTGAGTACT+TGG | - | chr5.3:52173641-52173660 | MS.gene049980:CDS | 50.0% | |
| ACCGGGTTTCTATAGGGTGT+TGG | + | chr5.3:52173099-52173118 | None:intergenic | 50.0% | |
| AGAAGCCATGTTTCAGGACG+GGG | - | chr5.3:52173387-52173406 | MS.gene049980:intron | 50.0% | |
| ATAGAGGGATCCTGGGTAGT+GGG | - | chr5.3:52171122-52171141 | MS.gene049980:CDS | 50.0% | |
| ATGCCTGACCCAGGTTTAGA+AGG | - | chr5.3:52172530-52172549 | MS.gene049980:intron | 50.0% | |
| CACCCTATAGAAACCCGGTT+TGG | - | chr5.3:52173100-52173119 | MS.gene049980:intron | 50.0% | |
| CAGAAGCCATGTTTCAGGAC+GGG | - | chr5.3:52173386-52173405 | MS.gene049980:intron | 50.0% | |
| CCTCTAGGTCCATTCCAAAC+CGG | + | chr5.3:52173117-52173136 | None:intergenic | 50.0% | |
| CCTTGCTGAGTACTTGGCTT+CGG | - | chr5.3:52173647-52173666 | MS.gene049980:CDS | 50.0% | |
| CGACATTGTCACGTTGACAC+GGG | - | chr5.3:52171021-52171040 | MS.gene049980:CDS | 50.0% | |
| CTCTAGGTCCATTCCAAACC+GGG | + | chr5.3:52173116-52173135 | None:intergenic | 50.0% | |
| CTGCCTGGTGATTCAAACCT+AGG | + | chr5.3:52173195-52173214 | None:intergenic | 50.0% | |
| GATCAAGTTCTCATGGTCGC+TGG | - | chr5.3:52173421-52173440 | MS.gene049980:CDS | 50.0% | |
| GATCGTGCTCAAGATTCTGG+TGG | - | chr5.3:52170650-52170669 | MS.gene049980:CDS | 50.0% | |
| GCCAACACCCTATAGAAACC+CGG | - | chr5.3:52173095-52173114 | MS.gene049980:intron | 50.0% | |
| GCTGATCGTGCTCAAGATTC+TGG | - | chr5.3:52170647-52170666 | MS.gene049980:CDS | 50.0% | |
| GGATAAGTACCACCACCTGA+TGG | + | chr5.3:52173168-52173187 | None:intergenic | 50.0% | |
| TTATACTGAGGAGGGCCTCT+AGG | + | chr5.3:52173132-52173151 | None:intergenic | 50.0% | |
| TTTAGAGGAAGAGGAGGAGG+AGG | + | chr5.3:52170839-52170858 | None:intergenic | 50.0% | |
| TTTCCACGGATCTTCGACCA+TGG | + | chr5.3:52173493-52173512 | None:intergenic | 50.0% | |
| ! | AGCAAGGCTTGGTCCAGAAT+TGG | + | chr5.3:52173634-52173653 | None:intergenic | 50.0% |
| ! | CTGCGAACCAGAAATGGACT+GGG | - | chr5.3:52171702-52171721 | MS.gene049980:intron | 50.0% |
| ! | GCTCAAGATTCTGGTGGTGA+AGG | - | chr5.3:52170656-52170675 | MS.gene049980:CDS | 50.0% |
| ! | GGGTTTAGGGTTGAAAACGG+AGG | - | chr5.3:52171525-52171544 | MS.gene049980:intron | 50.0% |
| ! | GTTTAGGGTGAACTGAGCGA+AGG | - | chr5.3:52171439-52171458 | MS.gene049980:intron | 50.0% |
| !! | CTGCCGTAAACCTTTAAGGC+AGG | + | chr5.3:52172360-52172379 | None:intergenic | 50.0% |
| !! | GGTGTTGGCAATGCTTGAGT+GGG | + | chr5.3:52173084-52173103 | None:intergenic | 50.0% |
| !! | TTGGGCCATTGATTCATGCC+TGG | + | chr5.3:52173237-52173256 | None:intergenic | 50.0% |
| AAGCGGCTGCGAACCAGAAA+TGG | - | chr5.3:52171696-52171715 | MS.gene049980:intron | 55.0% | |
| ACCCGATCTCCCACCTAAAG+CGG | - | chr5.3:52171679-52171698 | MS.gene049980:intron | 55.0% | |
| AGGGGTCAACCCTTGTTGCT+TGG | - | chr5.3:52172492-52172511 | MS.gene049980:intron | 55.0% | |
| CACTACCCCGTCCTGAAACA+TGG | + | chr5.3:52173395-52173414 | None:intergenic | 55.0% | |
| CATGTTTCAGGACGGGGTAG+TGG | - | chr5.3:52173393-52173412 | MS.gene049980:intron | 55.0% | |
| CCATTACGTCCATCAGGTGG+TGG | - | chr5.3:52173156-52173175 | MS.gene049980:intron | 55.0% | |
| CCGAAGCCAAGTACTCAGCA+AGG | + | chr5.3:52173650-52173669 | None:intergenic | 55.0% | |
| CCTTTGTGATCCCACTACCC+AGG | + | chr5.3:52171135-52171154 | None:intergenic | 55.0% | |
| CGCTGGTCCAATGAAGACAG+TGG | - | chr5.3:52173438-52173457 | MS.gene049980:CDS | 55.0% | |
| CTCCGGGATCCGTCCAAAAT+TGG | - | chr5.3:52171771-52171790 | MS.gene049980:intron | 55.0% | |
| GATAGAGGGATCCTGGGTAG+TGG | - | chr5.3:52171121-52171140 | MS.gene049980:CDS | 55.0% | |
| GCCAAGTACTCAGCAAGGCT+TGG | + | chr5.3:52173645-52173664 | None:intergenic | 55.0% | |
| GCTGCGAACCAGAAATGGAC+TGG | - | chr5.3:52171701-52171720 | MS.gene049980:intron | 55.0% | |
| GGCAATGCTTGAGTGGGAGA+TGG | + | chr5.3:52173078-52173097 | None:intergenic | 55.0% | |
| GTGGGAGATGGAGACATCTG+CGG | + | chr5.3:52173066-52173085 | None:intergenic | 55.0% | |
| TAGGGTGAACTGAGCGAAGG+CGG | - | chr5.3:52171442-52171461 | MS.gene049980:intron | 55.0% | |
| TTGGCCGAGATTGACTGCCT+AGG | - | chr5.3:52171790-52171809 | MS.gene049980:intron | 55.0% | |
| ! | AGCCGCTTTAGGTGGGAGAT+CGG | + | chr5.3:52171684-52171703 | None:intergenic | 55.0% |
| ! | CAATTTTGGACGGATCCCGG+AGG | + | chr5.3:52171773-52171792 | None:intergenic | 55.0% |
| ! | CCACCACCTGATGGACGTAA+TGG | + | chr5.3:52173159-52173178 | None:intergenic | 55.0% |
| ! | GGCCAATTTTGGACGGATCC+CGG | + | chr5.3:52171776-52171795 | None:intergenic | 55.0% |
| ! | GGGGTCAACCCTTGTTGCTT+GGG | - | chr5.3:52172493-52172512 | MS.gene049980:intron | 55.0% |
| ! | GTCAACCCTTGTTGCTTGGG+AGG | - | chr5.3:52172496-52172515 | MS.gene049980:intron | 55.0% |
| !! | CCGGTTTGGAATGGACCTAG+AGG | - | chr5.3:52173114-52173133 | MS.gene049980:intron | 55.0% |
| !! | CCTGGGTAGTGGGATCACAA+AGG | - | chr5.3:52171132-52171151 | MS.gene049980:CDS | 55.0% |
| !! | GGGTGTTGGCAATGCTTGAG+TGG | + | chr5.3:52173085-52173104 | None:intergenic | 55.0% |
| !! | TTCTGGTTCGCAGCCGCTTT+AGG | + | chr5.3:52171695-52171714 | None:intergenic | 55.0% |
| AGAGGAAGAGGAGGAGGAGG+TGG | + | chr5.3:52170836-52170855 | None:intergenic | 60.0% | |
| CCTAACTCTAGTCGAGGGCG+AGG | - | chr5.3:52173342-52173361 | MS.gene049980:intron | 60.0% | |
| CCTCGCCCTCGACTAGAGTT+AGG | + | chr5.3:52173345-52173364 | None:intergenic | 60.0% | |
| GAGTCCTGTTCATGTCCGGC+CGG | - | chr5.3:52170802-52170821 | MS.gene049980:CDS | 60.0% | |
| GGAGGAGGTGGCAAATGCTC+CGG | + | chr5.3:52170824-52170843 | None:intergenic | 60.0% | |
| GGTCCATGGTCGAAGATCCG+TGG | - | chr5.3:52173487-52173506 | MS.gene049980:CDS | 60.0% | |
| TAGGTGGGAGATCGGGTTCC+CGG | + | chr5.3:52171676-52171695 | None:intergenic | 60.0% | |
| ! | GCCGCTTTAGGTGGGAGATC+GGG | + | chr5.3:52171683-52171702 | None:intergenic | 60.0% |
| ! | GGTTCGCAGCCGCTTTAGGT+GGG | + | chr5.3:52171691-52171710 | None:intergenic | 60.0% |
| ! | TGGTTCGCAGCCGCTTTAGG+TGG | + | chr5.3:52171692-52171711 | None:intergenic | 60.0% |
| !! | TCAGGACGGGGTAGTGGACA+AGG | - | chr5.3:52173399-52173418 | MS.gene049980:intron | 60.0% |
| AAGGCGGTGGTGAAGGAGGG+CGG | - | chr5.3:52171458-52171477 | MS.gene049980:intron | 65.0% | |
| ACTCTAGTCGAGGGCGAGGC+AGG | - | chr5.3:52173346-52173365 | MS.gene049980:intron | 65.0% | |
| AGCGAAGGCGGTGGTGAAGG+AGG | - | chr5.3:52171454-52171473 | MS.gene049980:intron | 65.0% | |
| CGCAACCGGAGCATGCGAAC+CGG | - | chr5.3:52171654-52171673 | MS.gene049980:intron | 65.0% | |
| CGGTTCGCATGCTCCGGTTG+CGG | + | chr5.3:52171656-52171675 | None:intergenic | 65.0% | |
| CTCTAGTCGAGGGCGAGGCA+GGG | - | chr5.3:52173347-52173366 | MS.gene049980:intron | 65.0% | |
| CTGAGCGAAGGCGGTGGTGA+AGG | - | chr5.3:52171451-52171470 | MS.gene049980:intron | 65.0% | |
| GAGGTGGCAAATGCTCCGGC+CGG | + | chr5.3:52170820-52170839 | None:intergenic | 65.0% | |
| GCAACCGGAGCATGCGAACC+GGG | - | chr5.3:52171655-52171674 | MS.gene049980:intron | 65.0% | |
| GCGAAGGCGGTGGTGAAGGA+GGG | - | chr5.3:52171455-52171474 | MS.gene049980:intron | 65.0% | |
| GGTGAACTGAGCGAAGGCGG+TGG | - | chr5.3:52171445-52171464 | MS.gene049980:intron | 65.0% | |
| GGTTCGCATGCTCCGGTTGC+GGG | + | chr5.3:52171655-52171674 | None:intergenic | 65.0% | |
| TCTAGTCGAGGGCGAGGCAG+GGG | - | chr5.3:52173348-52173367 | MS.gene049980:intron | 65.0% | |
| TGCTCCGGCCGGACATGAAC+AGG | + | chr5.3:52170809-52170828 | None:intergenic | 65.0% | |
| TTGGACGGATCCCGGAGGAG+CGG | + | chr5.3:52171768-52171787 | None:intergenic | 65.0% | |
| ! | GGTTCCCGGTTCGCATGCTC+CGG | + | chr5.3:52171662-52171681 | None:intergenic | 65.0% |
| GAGGGCGAGGCAGGGGATTC+TGG | - | chr5.3:52173355-52173374 | MS.gene049980:intron | 70.0% | |
| ! | AGGTGTGCGTGCCGCTCCTC+CGG | - | chr5.3:52171754-52171773 | MS.gene049980:intron | 70.0% |
| GCGGTGGTGAAGGAGGGCGG+CGG | - | chr5.3:52171461-52171480 | MS.gene049980:intron | 75.0% | |
| GTGGTGAAGGAGGGCGGCGG+AGG | - | chr5.3:52171464-52171483 | MS.gene049980:intron | 75.0% | |
| ! | GGTGTGCGTGCCGCTCCTCC+GGG | - | chr5.3:52171755-52171774 | MS.gene049980:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 52170596 | 52173707 | 52170596 | ID=MS.gene049980 |
| chr5.3 | mRNA | 52170596 | 52173707 | 52170596 | ID=MS.gene049980.t1;Parent=MS.gene049980 |
| chr5.3 | exon | 52173413 | 52173707 | 52173413 | ID=MS.gene049980.t1.exon1;Parent=MS.gene049980.t1 |
| chr5.3 | CDS | 52173413 | 52173707 | 52173413 | ID=cds.MS.gene049980.t1;Parent=MS.gene049980.t1 |
| chr5.3 | exon | 52170596 | 52171251 | 52170596 | ID=MS.gene049980.t1.exon2;Parent=MS.gene049980.t1 |
| chr5.3 | CDS | 52170596 | 52171251 | 52170596 | ID=cds.MS.gene049980.t1;Parent=MS.gene049980.t1 |
| Gene Sequence |
| Protein sequence |
