Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21312.t1 | XP_024640872.1 | 89.6 | 318 | 27 | 3 | 1 | 313 | 1 | 317 | 2.60E-144 | 521.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21312.t1 | Q9SB47 | 30.3 | 340 | 190 | 10 | 1 | 315 | 1 | 318 | 8.3e-14 | 79.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21312.t1 | G7JYE9 | 89.6 | 318 | 27 | 3 | 1 | 313 | 1 | 317 | 1.9e-144 | 521.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049978 | MS.gene21312 | 0.925865 | 1.03E-90 | -1.69E-46 |
| MS.gene049980 | MS.gene21312 | 0.923642 | 2.03E-89 | -1.69E-46 |
| MS.gene052361 | MS.gene21312 | 0.803777 | 2.97E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21312.t1 | MTR_5g066450 | 91.195 | 318 | 22 | 3 | 1 | 313 | 1 | 317 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 95 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAGAAATATTTGGATTA+TGG | 0.170990 | 5.4:-51929573 | None:intergenic |
| ATATATTCTGAAGAAATATT+TGG | 0.172105 | 5.4:-51929580 | None:intergenic |
| GAGGGCGAGGCAGGGGATTC+TGG | 0.243119 | 5.4:+51929671 | MS.gene21312:CDS |
| CAAAATCTACAAGTACAAAA+AGG | 0.267103 | 5.4:+51929896 | MS.gene21312:CDS |
| TGAATGCATTCTCCGATAAA+AGG | 0.308337 | 5.4:+51927092 | MS.gene21312:CDS |
| GCTGATCGTGCTCAAGATTC+TGG | 0.314709 | 5.4:+51926959 | MS.gene21312:CDS |
| CAAATCAGTCTCCAGCATTC+AGG | 0.337696 | 5.4:+51929629 | MS.gene21312:CDS |
| TTCCAAACCGGGTTTCTATA+GGG | 0.348407 | 5.4:-51929418 | None:intergenic |
| CTGAATGCTGGAGACTGATT+TGG | 0.356018 | 5.4:-51929628 | None:intergenic |
| ATTCCAAACCGGGTTTCTAT+AGG | 0.356290 | 5.4:-51929419 | None:intergenic |
| ACCAAGCCTTGCTGAGTACT+TGG | 0.365165 | 5.4:+51929957 | MS.gene21312:CDS |
| GACCTCTTGTAAAATCGTTC+TGG | 0.369590 | 5.4:-51929784 | None:intergenic |
| AGCAAGGCTTGGTCCAGAAT+TGG | 0.370128 | 5.4:-51929947 | None:intergenic |
| CTATATTCTGAAGCAGGAAT+TGG | 0.374109 | 5.4:-51929604 | None:intergenic |
| ATCGTTGAATACCATATAAT+AGG | 0.376974 | 5.4:-51929838 | None:intergenic |
| TTATCGGAGAATGCATTCAT+TGG | 0.385702 | 5.4:-51927088 | None:intergenic |
| TGCTCCGGCCGGACATGAAC+AGG | 0.401487 | 5.4:-51927118 | None:intergenic |
| ACCACAACCACTGTCTTCAT+TGG | 0.403576 | 5.4:-51929761 | None:intergenic |
| AGAGGAAGAGGAGGAGGAGG+TGG | 0.406002 | 5.4:-51927145 | None:intergenic |
| GAAATATTTGGATTATGGTT+GGG | 0.406081 | 5.4:-51929568 | None:intergenic |
| AACAACAGAAGCCATGTTTC+AGG | 0.410490 | 5.4:+51929697 | MS.gene21312:CDS |
| ACTCTAGTCGAGGGCGAGGC+AGG | 0.422136 | 5.4:+51929662 | MS.gene21312:CDS |
| CCTCGCCCTCGACTAGAGTT+AGG | 0.437061 | 5.4:-51929658 | None:intergenic |
| TTTAGAGGAAGAGGAGGAGG+AGG | 0.447022 | 5.4:-51927148 | None:intergenic |
| AACTTTCCATTACGTCCATC+AGG | 0.451990 | 5.4:+51929466 | MS.gene21312:CDS |
| AGAAATATTTGGATTATGGT+TGG | 0.454619 | 5.4:-51929569 | None:intergenic |
| AACTCGGGAACAAAATTTAG+AGG | 0.455286 | 5.4:-51927163 | None:intergenic |
| CCTCTAGGTCCATTCCAAAC+CGG | 0.456547 | 5.4:-51929430 | None:intergenic |
| TTAGGATTGTTCCTGAATGC+TGG | 0.468362 | 5.4:-51929640 | None:intergenic |
| TGCAAGAACACTAGGTGTAC+TGG | 0.469110 | 5.4:-51926993 | None:intergenic |
| GTGGTACTTATCCAAGTCCT+AGG | 0.471418 | 5.4:+51929491 | MS.gene21312:CDS |
| CTCTAGGTCCATTCCAAACC+GGG | 0.476742 | 5.4:-51929429 | None:intergenic |
| TTGCACCAGGCATGAATCAA+TGG | 0.477134 | 5.4:+51929545 | MS.gene21312:CDS |
| CCTTGCTGAGTACTTGGCTT+CGG | 0.480630 | 5.4:+51929963 | MS.gene21312:CDS |
| CACCCTATAGAAACCCGGTT+TGG | 0.486436 | 5.4:+51929416 | MS.gene21312:CDS |
| CATGTTTCAGGACGGGGTAG+TGG | 0.496188 | 5.4:+51929709 | MS.gene21312:CDS |
| TGAATGCTGTGACGAAAACT+CGG | 0.497237 | 5.4:-51927179 | None:intergenic |
| AAAGGAGTCCTGTTCATGTC+CGG | 0.499050 | 5.4:+51927110 | MS.gene21312:CDS |
| TCTAGTCGAGGGCGAGGCAG+GGG | 0.500795 | 5.4:+51929664 | MS.gene21312:CDS |
| TTTGGACTATATTCTGAAGC+AGG | 0.501364 | 5.4:-51929610 | None:intergenic |
| GGAGGAGGTGGCAAATGCTC+CGG | 0.505617 | 5.4:-51927133 | None:intergenic |
| AAATTTAGAGGAAGAGGAGG+AGG | 0.507025 | 5.4:-51927151 | None:intergenic |
| TTATACTGAGGAGGGCCTCT+AGG | 0.509258 | 5.4:-51929445 | None:intergenic |
| TTGGGCCATTGATTCATGCC+TGG | 0.515424 | 5.4:-51929550 | None:intergenic |
| GGTGATTCAAACCTAGGACT+TGG | 0.517232 | 5.4:-51929502 | None:intergenic |
| CAGAAGCCATGTTTCAGGAC+GGG | 0.517719 | 5.4:+51929702 | MS.gene21312:CDS |
| GTTGAAGAATCTTCAGCCAA+TGG | 0.520310 | 5.4:-51927019 | None:intergenic |
| GCCAAGTACTCAGCAAGGCT+TGG | 0.520790 | 5.4:-51929958 | None:intergenic |
| TCCAATGAAGACAGTGGTTG+TGG | 0.522840 | 5.4:+51929760 | MS.gene21312:CDS |
| ACAAAATTTAGAGGAAGAGG+AGG | 0.525858 | 5.4:-51927154 | None:intergenic |
| GGAACAAAATTTAGAGGAAG+AGG | 0.527833 | 5.4:-51927157 | None:intergenic |
| CTCTAGTCGAGGGCGAGGCA+GGG | 0.530316 | 5.4:+51929663 | MS.gene21312:CDS |
| ACCGGGTTTCTATAGGGTGT+TGG | 0.539818 | 5.4:-51929412 | None:intergenic |
| ACAAAGAAAGAAACGGTTGA+AGG | 0.541768 | 5.4:+51926922 | MS.gene21312:CDS |
| GCTCAAGATTCTGGTGGTGA+AGG | 0.542553 | 5.4:+51926968 | MS.gene21312:CDS |
| CTGCCTGGTGATTCAAACCT+AGG | 0.548534 | 5.4:-51929508 | None:intergenic |
| TCTGTATAGTAATTAAATCT+CGG | 0.550622 | 5.4:-51927064 | None:intergenic |
| TATAGAAACCCGGTTTGGAA+TGG | 0.550677 | 5.4:+51929421 | MS.gene21312:CDS |
| CACTACCCCGTCCTGAAACA+TGG | 0.553581 | 5.4:-51929708 | None:intergenic |
| ATTCAGAACAAAGAAAGAAA+CGG | 0.553697 | 5.4:+51926915 | MS.gene21312:CDS |
| TAGTGTTCTTGCAAATCCAT+TGG | 0.559128 | 5.4:+51927003 | MS.gene21312:CDS |
| CCATTACGTCCATCAGGTGG+TGG | 0.559408 | 5.4:+51929472 | MS.gene21312:CDS |
| TTTCCACGGATCTTCGACCA+TGG | 0.559648 | 5.4:-51929806 | None:intergenic |
| AATGGATTTGCAAGAACACT+AGG | 0.560524 | 5.4:-51927001 | None:intergenic |
| CCACCACCTGATGGACGTAA+TGG | 0.561664 | 5.4:-51929472 | None:intergenic |
| AACAATCCTAACTCTAGTCG+AGG | 0.563734 | 5.4:+51929652 | MS.gene21312:CDS |
| CCTAACTCTAGTCGAGGGCG+AGG | 0.567720 | 5.4:+51929658 | MS.gene21312:CDS |
| CCATCATACAACTTTGCACC+AGG | 0.567805 | 5.4:+51929532 | MS.gene21312:CDS |
| GATCAAGTTCTCATGGTCGC+TGG | 0.572945 | 5.4:+51929737 | MS.gene21312:CDS |
| TCAGGACGGGGTAGTGGACA+AGG | 0.574030 | 5.4:+51929715 | MS.gene21312:CDS |
| GGCAATGCTTGAGTGGGAGA+TGG | 0.579037 | 5.4:-51929391 | None:intergenic |
| AAGTTGTATGATGGACTGCC+TGG | 0.584395 | 5.4:-51929523 | None:intergenic |
| CCTGGTGCAAAGTTGTATGA+TGG | 0.585843 | 5.4:-51929532 | None:intergenic |
| AGAAGCCATGTTTCAGGACG+GGG | 0.589396 | 5.4:+51929703 | MS.gene21312:CDS |
| AGTCCTAGGTTTGAATCACC+AGG | 0.592057 | 5.4:+51929505 | MS.gene21312:CDS |
| GGACAAGGATCAAGTTCTCA+TGG | 0.593437 | 5.4:+51929730 | MS.gene21312:CDS |
| GGGTGTTGGCAATGCTTGAG+TGG | 0.598136 | 5.4:-51929398 | None:intergenic |
| GAGTCCTGTTCATGTCCGGC+CGG | 0.598203 | 5.4:+51927114 | MS.gene21312:CDS |
| ATGGAAAGTTATACTGAGGA+GGG | 0.600848 | 5.4:-51929453 | None:intergenic |
| AATGGAAAGTTATACTGAGG+AGG | 0.613089 | 5.4:-51929454 | None:intergenic |
| GGTCCATGGTCGAAGATCCG+TGG | 0.620332 | 5.4:+51929803 | MS.gene21312:CDS |
| GCCAACACCCTATAGAAACC+CGG | 0.621280 | 5.4:+51929411 | MS.gene21312:CDS |
| GAGGTGGCAAATGCTCCGGC+CGG | 0.628444 | 5.4:-51927129 | None:intergenic |
| GAATGCTGTGACGAAAACTC+GGG | 0.629007 | 5.4:-51927178 | None:intergenic |
| GGATAAGTACCACCACCTGA+TGG | 0.630693 | 5.4:-51929481 | None:intergenic |
| ACAGAAGCCATGTTTCAGGA+CGG | 0.632034 | 5.4:+51929701 | MS.gene21312:CDS |
| CCGAAGCCAAGTACTCAGCA+AGG | 0.648916 | 5.4:-51929963 | None:intergenic |
| CGTAATGGAAAGTTATACTG+AGG | 0.666525 | 5.4:-51929457 | None:intergenic |
| ACAATCCTAACTCTAGTCGA+GGG | 0.667093 | 5.4:+51929653 | MS.gene21312:CDS |
| GATCGTGCTCAAGATTCTGG+TGG | 0.668441 | 5.4:+51926962 | MS.gene21312:CDS |
| TTTCCATTACGTCCATCAGG+TGG | 0.670092 | 5.4:+51929469 | MS.gene21312:CDS |
| GTGGGAGATGGAGACATCTG+CGG | 0.673802 | 5.4:-51929379 | None:intergenic |
| GGTGTTGGCAATGCTTGAGT+GGG | 0.676495 | 5.4:-51929397 | None:intergenic |
| CCGGTTTGGAATGGACCTAG+AGG | 0.693305 | 5.4:+51929430 | MS.gene21312:CDS |
| CGCTGGTCCAATGAAGACAG+TGG | 0.716351 | 5.4:+51929754 | MS.gene21312:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAGTTAAATACTCAATT+AGG | + | chr5.4:51927249-51927268 | MS.gene21312:intron | 15.0% |
| !!! | AATTTTTGAAACCTATTATA+TGG | + | chr5.4:51929827-51929846 | MS.gene21312:CDS | 15.0% |
| !!! | ATATATTCTGAAGAAATATT+TGG | - | chr5.4:51929583-51929602 | None:intergenic | 15.0% |
| !!! | ATTTATTTTGTTATTGTAAC+TGG | + | chr5.4:51928874-51928893 | MS.gene21312:intron | 15.0% |
| !!! | TTAACATTTTAACTGTTTTT+TGG | + | chr5.4:51928716-51928735 | MS.gene21312:intron | 15.0% |
| !!! | TTTTTTTTTGTTTGTTACAT+TGG | - | chr5.4:51927605-51927624 | None:intergenic | 15.0% |
| !! | AAAATCTACAAGTACAAAAA+GGG | + | chr5.4:51929897-51929916 | MS.gene21312:CDS | 20.0% |
| !! | ATTAAGATATGATTGAATTG+AGG | + | chr5.4:51929198-51929217 | MS.gene21312:intron | 20.0% |
| !! | ATTATTATAGCAATGCATAT+TGG | + | chr5.4:51928490-51928509 | MS.gene21312:intron | 20.0% |
| !! | CTTCAAACTATATATTTGAA+GGG | - | chr5.4:51928558-51928577 | None:intergenic | 20.0% |
| !! | TCAGGTTAAATTAATATCTT+CGG | - | chr5.4:51929030-51929049 | None:intergenic | 20.0% |
| !! | TCTGTATAGTAATTAAATCT+CGG | - | chr5.4:51927067-51927086 | None:intergenic | 20.0% |
| !! | TCTTCAAACTATATATTTGA+AGG | - | chr5.4:51928559-51928578 | None:intergenic | 20.0% |
| !! | TTTATAATTTGACTCTATCA+AGG | + | chr5.4:51928612-51928631 | MS.gene21312:intron | 20.0% |
| ! | AACAAAACAAATAGGGTTTA+GGG | + | chr5.4:51927739-51927758 | MS.gene21312:intron | 25.0% |
| ! | AATAAAGTCCGTCATTATAT+GGG | + | chr5.4:51928238-51928257 | MS.gene21312:intron | 25.0% |
| ! | AATTAGGTTACTGAAATTGT+AGG | + | chr5.4:51927265-51927284 | MS.gene21312:intron | 25.0% |
| ! | AGAAATATTTGGATTATGGT+TGG | - | chr5.4:51929572-51929591 | None:intergenic | 25.0% |
| ! | AGAGAAGAACAAAACAAATA+GGG | + | chr5.4:51927732-51927751 | MS.gene21312:intron | 25.0% |
| ! | ATAGGTTTCAAAAATTTCCA+CGG | - | chr5.4:51929823-51929842 | None:intergenic | 25.0% |
| ! | ATCGTTGAATACCATATAAT+AGG | - | chr5.4:51929841-51929860 | None:intergenic | 25.0% |
| ! | ATCTTCGGTATATTATTAGA+GGG | - | chr5.4:51929015-51929034 | None:intergenic | 25.0% |
| ! | ATGACGATGATGATTTATTA+GGG | + | chr5.4:51927220-51927239 | MS.gene21312:intron | 25.0% |
| ! | ATTCAGAACAAAGAAAGAAA+CGG | + | chr5.4:51926915-51926934 | MS.gene21312:CDS | 25.0% |
| ! | CAAAATCTACAAGTACAAAA+AGG | + | chr5.4:51929896-51929915 | MS.gene21312:CDS | 25.0% |
| ! | CCTTGATCAATAAAATTACA+GGG | + | chr5.4:51928943-51928962 | MS.gene21312:intron | 25.0% |
| ! | CTGAAGAAATATTTGGATTA+TGG | - | chr5.4:51929576-51929595 | None:intergenic | 25.0% |
| ! | GAAATATTTGGATTATGGTT+GGG | - | chr5.4:51929571-51929590 | None:intergenic | 25.0% |
| ! | GAAGATATTAATTTAACCTG+AGG | + | chr5.4:51929029-51929048 | MS.gene21312:intron | 25.0% |
| ! | GGACTATAATGATATTAAGT+TGG | + | chr5.4:51928270-51928289 | MS.gene21312:intron | 25.0% |
| ! | TAATAAAGTCCGTCATTATA+TGG | + | chr5.4:51928237-51928256 | MS.gene21312:intron | 25.0% |
| ! | TACAATTTCATAGACTATGT+TGG | - | chr5.4:51928211-51928230 | None:intergenic | 25.0% |
| ! | TAGAGAAGAACAAAACAAAT+AGG | + | chr5.4:51927731-51927750 | MS.gene21312:intron | 25.0% |
| ! | TATCTTCGGTATATTATTAG+AGG | - | chr5.4:51929016-51929035 | None:intergenic | 25.0% |
| ! | TTAAAATTTGAACCGTTTGA+AGG | - | chr5.4:51927930-51927949 | None:intergenic | 25.0% |
| !! | CCTGTAATTTTATTGATCAA+GGG | - | chr5.4:51928945-51928964 | None:intergenic | 25.0% |
| !! | TCAAACGGTTCAAATTTTAA+GGG | + | chr5.4:51927930-51927949 | MS.gene21312:intron | 25.0% |
| !! | TTCAAACGGTTCAAATTTTA+AGG | + | chr5.4:51927929-51927948 | MS.gene21312:intron | 25.0% |
| !!! | ATATTGATAATGTGTTGACA+AGG | + | chr5.4:51928408-51928427 | MS.gene21312:intron | 25.0% |
| !!! | TATTAAGTTGGTATTGATGT+CGG | + | chr5.4:51928282-51928301 | MS.gene21312:intron | 25.0% |
| AAATTCTAACCTTCTAAACC+TGG | - | chr5.4:51928858-51928877 | None:intergenic | 30.0% | |
| AACCGTTTGAAGGAAAATTT+GGG | - | chr5.4:51927920-51927939 | None:intergenic | 30.0% | |
| AATTCTAACCTTCTAAACCT+GGG | - | chr5.4:51928857-51928876 | None:intergenic | 30.0% | |
| ACAGAGAAGAACAATAAACA+TGG | + | chr5.4:51927644-51927663 | MS.gene21312:intron | 30.0% | |
| AGATATGATTGAATTGAGGT+CGG | + | chr5.4:51929202-51929221 | MS.gene21312:intron | 30.0% | |
| ATAATTTGACTCTATCAAGG+AGG | + | chr5.4:51928615-51928634 | MS.gene21312:intron | 30.0% | |
| CAGAGAAGAACAATAAACAT+GGG | + | chr5.4:51927645-51927664 | MS.gene21312:intron | 30.0% | |
| CCCTTGATCAATAAAATTAC+AGG | + | chr5.4:51928942-51928961 | MS.gene21312:intron | 30.0% | |
| GAACAAAACAAATAGGGTTT+AGG | + | chr5.4:51927738-51927757 | MS.gene21312:intron | 30.0% | |
| GAATAACATCAGCATAGATT+AGG | - | chr5.4:51928468-51928487 | None:intergenic | 30.0% | |
| GATGACGATGATGATTTATT+AGG | + | chr5.4:51927219-51927238 | MS.gene21312:intron | 30.0% | |
| TAAGTTCAGGGTTATTTGTT+AGG | + | chr5.4:51928787-51928806 | MS.gene21312:intron | 30.0% | |
| TCATTATATGGGTATTTGCA+GGG | + | chr5.4:51928249-51928268 | MS.gene21312:intron | 30.0% | |
| TGCAAATACCCATATAATGA+CGG | - | chr5.4:51928249-51928268 | None:intergenic | 30.0% | |
| ! | AAGTTCAGGGTTATTTGTTA+GGG | + | chr5.4:51928788-51928807 | MS.gene21312:intron | 30.0% |
| ! | CAAACGGTTCAAATTTTAAG+GGG | + | chr5.4:51927931-51927950 | MS.gene21312:intron | 30.0% |
| ! | CCCTGTAATTTTATTGATCA+AGG | - | chr5.4:51928946-51928965 | None:intergenic | 30.0% |
| ! | TACCCAAATTTTCCTTCAAA+CGG | + | chr5.4:51927915-51927934 | MS.gene21312:intron | 30.0% |
| ! | TCATACATTTTCTTCAGTGT+TGG | - | chr5.4:51930004-51930023 | None:intergenic | 30.0% |
| ! | TTCTTCAACTGTTTTATCAG+CGG | + | chr5.4:51927033-51927052 | MS.gene21312:CDS | 30.0% |
| ! | TTTTTGTTCCTTGAAAGACT+AGG | - | chr5.4:51929122-51929141 | None:intergenic | 30.0% |
| !! | AAACGGTTCAAATTTTAAGG+GGG | + | chr5.4:51927932-51927951 | MS.gene21312:intron | 30.0% |
| !! | ATTAAGTTGGTATTGATGTC+GGG | + | chr5.4:51928283-51928302 | MS.gene21312:intron | 30.0% |
| !! | GTATATTATTAGAGGGCATT+AGG | - | chr5.4:51929008-51929027 | None:intergenic | 30.0% |
| !!! | GTTTTTTGGAGTTAGATAGA+TGG | + | chr5.4:51928730-51928749 | MS.gene21312:intron | 30.0% |
| !!! | TTTTTTACCTTTTGGCAGTT+AGG | + | chr5.4:51928763-51928782 | MS.gene21312:intron | 30.0% |
| AACTCGGGAACAAAATTTAG+AGG | - | chr5.4:51927166-51927185 | None:intergenic | 35.0% | |
| AACTTATCCTAACTGCCAAA+AGG | - | chr5.4:51928773-51928792 | None:intergenic | 35.0% | |
| AATGGAAAGTTATACTGAGG+AGG | - | chr5.4:51929457-51929476 | None:intergenic | 35.0% | |
| AATGGAAATGAGGAGAGAAA+AGG | + | chr5.4:51927875-51927894 | MS.gene21312:intron | 35.0% | |
| ACAAAATTTAGAGGAAGAGG+AGG | - | chr5.4:51927157-51927176 | None:intergenic | 35.0% | |
| ACAAAGAAAGAAACGGTTGA+AGG | + | chr5.4:51926922-51926941 | MS.gene21312:CDS | 35.0% | |
| ACAAAGAGAGAATGGAAATG+AGG | + | chr5.4:51927865-51927884 | MS.gene21312:intron | 35.0% | |
| ACCTAAGTGAAAAACTGTGA+CGG | - | chr5.4:51928053-51928072 | None:intergenic | 35.0% | |
| AGAACAATAAACATGGGTGT+AGG | + | chr5.4:51927651-51927670 | MS.gene21312:intron | 35.0% | |
| ATCCTAAACAGAATACAAGC+AGG | - | chr5.4:51928533-51928552 | None:intergenic | 35.0% | |
| ATCTACAAGTACAAAAAGGG+AGG | + | chr5.4:51929900-51929919 | MS.gene21312:CDS | 35.0% | |
| ATGGAAAGTTATACTGAGGA+GGG | - | chr5.4:51929456-51929475 | None:intergenic | 35.0% | |
| ATGGAAATGAGGAGAGAAAA+GGG | + | chr5.4:51927876-51927895 | MS.gene21312:intron | 35.0% | |
| CTTAATAAGTCCGAGTTAAG+TGG | - | chr5.4:51927298-51927317 | None:intergenic | 35.0% | |
| GAACCGTTTGAAGGAAAATT+TGG | - | chr5.4:51927921-51927940 | None:intergenic | 35.0% | |
| GAATGTTTGGTACAATGGAA+GGG | + | chr5.4:51927805-51927824 | MS.gene21312:intron | 35.0% | |
| GAGAAGAAACACTAGAGAAA+GGG | - | chr5.4:51928979-51928998 | None:intergenic | 35.0% | |
| GAGCTTGATTGAGTAAAGTT+TGG | + | chr5.4:51929051-51929070 | MS.gene21312:intron | 35.0% | |
| GGAACAAAATTTAGAGGAAG+AGG | - | chr5.4:51927160-51927179 | None:intergenic | 35.0% | |
| GTCATTATATGGGTATTTGC+AGG | + | chr5.4:51928248-51928267 | MS.gene21312:intron | 35.0% | |
| TAGTGTTCTTGCAAATCCAT+TGG | + | chr5.4:51927003-51927022 | MS.gene21312:CDS | 35.0% | |
| TCCTAAACAGAATACAAGCA+GGG | - | chr5.4:51928532-51928551 | None:intergenic | 35.0% | |
| TCTACAAGTACAAAAAGGGA+GGG | + | chr5.4:51929901-51929920 | MS.gene21312:CDS | 35.0% | |
| TGAATGCATTCTCCGATAAA+AGG | + | chr5.4:51927092-51927111 | MS.gene21312:CDS | 35.0% | |
| TGAATGTTTGGTACAATGGA+AGG | + | chr5.4:51927804-51927823 | MS.gene21312:intron | 35.0% | |
| TGAGAAGAAACACTAGAGAA+AGG | - | chr5.4:51928980-51928999 | None:intergenic | 35.0% | |
| TGCAGATTGTAGTCTATTGA+TGG | - | chr5.4:51928588-51928607 | None:intergenic | 35.0% | |
| TGGAGTTAGATAGATGGTTA+GGG | + | chr5.4:51928736-51928755 | MS.gene21312:intron | 35.0% | |
| TGTTGTGCTATAAAGTAAGC+TGG | - | chr5.4:51929147-51929166 | None:intergenic | 35.0% | |
| TTATCGGAGAATGCATTCAT+TGG | - | chr5.4:51927091-51927110 | None:intergenic | 35.0% | |
| TTGCTTGGGAGGTTTATATA+AGG | + | chr5.4:51928822-51928841 | MS.gene21312:intron | 35.0% | |
| TTGGAGTTAGATAGATGGTT+AGG | + | chr5.4:51928735-51928754 | MS.gene21312:intron | 35.0% | |
| ! | AAAGGGTTTAGGGTTGAAAA+CGG | + | chr5.4:51927837-51927856 | MS.gene21312:intron | 35.0% |
| ! | AATGGATTTGCAAGAACACT+AGG | - | chr5.4:51927004-51927023 | None:intergenic | 35.0% |
| ! | AGTTCAGGGTTATTTGTTAG+GGG | + | chr5.4:51928789-51928808 | MS.gene21312:intron | 35.0% |
| ! | ATGAACAGGACTCCTTTTAT+CGG | - | chr5.4:51927107-51927126 | None:intergenic | 35.0% |
| ! | CGTAATGGAAAGTTATACTG+AGG | - | chr5.4:51929460-51929479 | None:intergenic | 35.0% |
| !! | CTATATTCTGAAGCAGGAAT+TGG | - | chr5.4:51929607-51929626 | None:intergenic | 35.0% |
| !! | TTAAGTTGGTATTGATGTCG+GGG | + | chr5.4:51928284-51928303 | MS.gene21312:intron | 35.0% |
| !! | TTTGGACTATATTCTGAAGC+AGG | - | chr5.4:51929613-51929632 | None:intergenic | 35.0% |
| !!! | AGGGTCAGTTTTTTACCTTT+TGG | + | chr5.4:51928755-51928774 | MS.gene21312:intron | 35.0% |
| !!! | GTTTTTAGCAAGTCCAATTC+TGG | + | chr5.4:51929934-51929953 | MS.gene21312:CDS | 35.0% |
| AAACAGCATGACACTAACCT+AGG | - | chr5.4:51928125-51928144 | None:intergenic | 40.0% | |
| AAATTTAGAGGAAGAGGAGG+AGG | - | chr5.4:51927154-51927173 | None:intergenic | 40.0% | |
| AACAACAGAAGCCATGTTTC+AGG | + | chr5.4:51929697-51929716 | MS.gene21312:CDS | 40.0% | |
| AACAATCCTAACTCTAGTCG+AGG | + | chr5.4:51929652-51929671 | MS.gene21312:CDS | 40.0% | |
| AACCACTTGTGTTAGTGACT+AGG | + | chr5.4:51927401-51927420 | MS.gene21312:intron | 40.0% | |
| AACTTTCCATTACGTCCATC+AGG | + | chr5.4:51929466-51929485 | MS.gene21312:CDS | 40.0% | |
| AATGAGGAGAGAAAAGGGTT+AGG | + | chr5.4:51927881-51927900 | MS.gene21312:intron | 40.0% | |
| ACAATCCTAACTCTAGTCGA+GGG | + | chr5.4:51929653-51929672 | MS.gene21312:CDS | 40.0% | |
| ACCCTGCTTGTATTCTGTTT+AGG | + | chr5.4:51928528-51928547 | MS.gene21312:intron | 40.0% | |
| AGGATTGTGTCCACTTAACT+CGG | + | chr5.4:51927285-51927304 | MS.gene21312:intron | 40.0% | |
| AGGTAGTCAATACTGGATAG+AGG | + | chr5.4:51927421-51927440 | MS.gene21312:intron | 40.0% | |
| AGTGACTAGGTAGTCAATAC+TGG | + | chr5.4:51927414-51927433 | MS.gene21312:intron | 40.0% | |
| ATAAACCTCCCAAGCAACAA+GGG | - | chr5.4:51928819-51928838 | None:intergenic | 40.0% | |
| ATGAGGAGAGAAAAGGGTTA+GGG | + | chr5.4:51927882-51927901 | MS.gene21312:intron | 40.0% | |
| ATTCCAAACCGGGTTTCTAT+AGG | - | chr5.4:51929422-51929441 | None:intergenic | 40.0% | |
| CCTAAGTGAAAAACTGTGAC+GGG | - | chr5.4:51928052-51928071 | None:intergenic | 40.0% | |
| GACCTCTTGTAAAATCGTTC+TGG | - | chr5.4:51929787-51929806 | None:intergenic | 40.0% | |
| GAGAAGAGAGAAAGGGTTTA+GGG | + | chr5.4:51927827-51927846 | MS.gene21312:intron | 40.0% | |
| GCAGGAGCAATAGGTATATT+GGG | - | chr5.4:51928657-51928676 | None:intergenic | 40.0% | |
| GGTAGTCAATACTGGATAGA+GGG | + | chr5.4:51927422-51927441 | MS.gene21312:intron | 40.0% | |
| GGTGTGAATGTTTGGTACAA+TGG | + | chr5.4:51927800-51927819 | MS.gene21312:intron | 40.0% | |
| GTTGAAGAATCTTCAGCCAA+TGG | - | chr5.4:51927022-51927041 | None:intergenic | 40.0% | |
| TACCTAGTCACTAACACAAG+TGG | - | chr5.4:51927406-51927425 | None:intergenic | 40.0% | |
| TATAAACCTCCCAAGCAACA+AGG | - | chr5.4:51928820-51928839 | None:intergenic | 40.0% | |
| TCTTCTGCCGTAAACCTTTA+AGG | - | chr5.4:51928679-51928698 | None:intergenic | 40.0% | |
| TGAATGCTGTGACGAAAACT+CGG | - | chr5.4:51927182-51927201 | None:intergenic | 40.0% | |
| TGGCAGTTAGGATAAGTTCA+GGG | + | chr5.4:51928775-51928794 | MS.gene21312:intron | 40.0% | |
| TTAGGATTGTTCCTGAATGC+TGG | - | chr5.4:51929643-51929662 | None:intergenic | 40.0% | |
| TTCCAAACCGGGTTTCTATA+GGG | - | chr5.4:51929421-51929440 | None:intergenic | 40.0% | |
| TTGGCAGTTAGGATAAGTTC+AGG | + | chr5.4:51928774-51928793 | MS.gene21312:intron | 40.0% | |
| TTTACTCAATCAAGCTCCTC+AGG | - | chr5.4:51929048-51929067 | None:intergenic | 40.0% | |
| ! | ACGATTTTACAAGAGGTCCA+TGG | + | chr5.4:51929789-51929808 | MS.gene21312:CDS | 40.0% |
| ! | CGGGGATGAATTTGAAACTA+GGG | + | chr5.4:51928302-51928321 | MS.gene21312:intron | 40.0% |
| ! | GAATTTGAAACTAGGGGCTT+AGG | + | chr5.4:51928309-51928328 | MS.gene21312:intron | 40.0% |
| ! | GGGGATGAATTTGAAACTAG+GGG | + | chr5.4:51928303-51928322 | MS.gene21312:intron | 40.0% |
| ! | GTCCAGAACGATTTTACAAG+AGG | + | chr5.4:51929782-51929801 | MS.gene21312:CDS | 40.0% |
| ! | TCAAGGAGGTATGTAGTGTT+AGG | + | chr5.4:51928629-51928648 | MS.gene21312:intron | 40.0% |
| ! | TCGGGGATGAATTTGAAACT+AGG | + | chr5.4:51928301-51928320 | MS.gene21312:intron | 40.0% |
| ! | TGTGTCATCCTAGTCTTTCA+AGG | + | chr5.4:51929111-51929130 | MS.gene21312:intron | 40.0% |
| !! | TATAGAAACCCGGTTTGGAA+TGG | + | chr5.4:51929421-51929440 | MS.gene21312:CDS | 40.0% |
| !! | TTGGACTTGCTAAAAACAGC+AGG | - | chr5.4:51929931-51929950 | None:intergenic | 40.0% |
| AAAGGAGTCCTGTTCATGTC+CGG | + | chr5.4:51927110-51927129 | MS.gene21312:CDS | 45.0% | |
| AAATCGTGATTTCCCGCAAC+CGG | + | chr5.4:51927955-51927974 | MS.gene21312:intron | 45.0% | |
| AATACTGGATAGAGGGATCC+TGG | + | chr5.4:51927429-51927448 | MS.gene21312:intron | 45.0% | |
| AATCTACACAGCGATCAGAG+TGG | - | chr5.4:51929294-51929313 | None:intergenic | 45.0% | |
| ACAGAAGCCATGTTTCAGGA+CGG | + | chr5.4:51929701-51929720 | MS.gene21312:CDS | 45.0% | |
| ACCACAACCACTGTCTTCAT+TGG | - | chr5.4:51929764-51929783 | None:intergenic | 45.0% | |
| ACCTATTGCTCCTGCCTTAA+AGG | + | chr5.4:51928662-51928681 | MS.gene21312:intron | 45.0% | |
| ACGACATTGTCACGTTGACA+CGG | + | chr5.4:51927334-51927353 | MS.gene21312:intron | 45.0% | |
| AGTCCTAGGTTTGAATCACC+AGG | + | chr5.4:51929505-51929524 | MS.gene21312:CDS | 45.0% | |
| ATACTGGATAGAGGGATCCT+GGG | + | chr5.4:51927430-51927449 | MS.gene21312:intron | 45.0% | |
| ATATAAGGATTGCCTGACCC+AGG | + | chr5.4:51928837-51928856 | MS.gene21312:intron | 45.0% | |
| ATGGAAGGGAGAAGAGAGAA+AGG | + | chr5.4:51927819-51927838 | MS.gene21312:intron | 45.0% | |
| CAAATCAGTCTCCAGCATTC+AGG | + | chr5.4:51929629-51929648 | MS.gene21312:CDS | 45.0% | |
| CAATGTCGTAGTGTCTGTGT+CGG | - | chr5.4:51927323-51927342 | None:intergenic | 45.0% | |
| CCATCATACAACTTTGCACC+AGG | + | chr5.4:51929532-51929551 | MS.gene21312:CDS | 45.0% | |
| CCTGGTGCAAAGTTGTATGA+TGG | - | chr5.4:51929535-51929554 | None:intergenic | 45.0% | |
| CGGAGGATACAAAGAGAGAA+TGG | + | chr5.4:51927857-51927876 | MS.gene21312:intron | 45.0% | |
| CTAACCTAGGCAGTCAATCT+CGG | - | chr5.4:51928112-51928131 | None:intergenic | 45.0% | |
| CTGAATGCTGGAGACTGATT+TGG | - | chr5.4:51929631-51929650 | None:intergenic | 45.0% | |
| GAATGCTGTGACGAAAACTC+GGG | - | chr5.4:51927181-51927200 | None:intergenic | 45.0% | |
| GCTCCTGCCTTAAAGGTTTA+CGG | + | chr5.4:51928669-51928688 | MS.gene21312:intron | 45.0% | |
| GGACAAGGATCAAGTTCTCA+TGG | + | chr5.4:51929730-51929749 | MS.gene21312:CDS | 45.0% | |
| GGAGAAGAGAGAAAGGGTTT+AGG | + | chr5.4:51927826-51927845 | MS.gene21312:intron | 45.0% | |
| GGCAGGAGCAATAGGTATAT+TGG | - | chr5.4:51928658-51928677 | None:intergenic | 45.0% | |
| GGTGATTCAAACCTAGGACT+TGG | - | chr5.4:51929505-51929524 | None:intergenic | 45.0% | |
| GTGGTACTTATCCAAGTCCT+AGG | + | chr5.4:51929491-51929510 | MS.gene21312:CDS | 45.0% | |
| TAACCTTCTAAACCTGGGTC+AGG | - | chr5.4:51928852-51928871 | None:intergenic | 45.0% | |
| TCCAATGAAGACAGTGGTTG+TGG | + | chr5.4:51929760-51929779 | MS.gene21312:CDS | 45.0% | |
| TGCAAATCCCAGTCCATTTC+TGG | - | chr5.4:51928027-51928046 | None:intergenic | 45.0% | |
| TGCAAGAACACTAGGTGTAC+TGG | - | chr5.4:51926996-51927015 | None:intergenic | 45.0% | |
| TGGAAGGGAGAAGAGAGAAA+GGG | + | chr5.4:51927820-51927839 | MS.gene21312:intron | 45.0% | |
| TTGCACCAGGCATGAATCAA+TGG | + | chr5.4:51929545-51929564 | MS.gene21312:CDS | 45.0% | |
| TTTCCATTACGTCCATCAGG+TGG | + | chr5.4:51929469-51929488 | MS.gene21312:CDS | 45.0% | |
| ! | CAATCTCGGCCAATTTTGGA+CGG | - | chr5.4:51928098-51928117 | None:intergenic | 45.0% |
| ! | CAGTCAATCTCGGCCAATTT+TGG | - | chr5.4:51928102-51928121 | None:intergenic | 45.0% |
| ! | CCCGTCACAGTTTTTCACTT+AGG | + | chr5.4:51928049-51928068 | MS.gene21312:intron | 45.0% |
| ! | GAGTTTTCGTCACAGCATTC+AGG | + | chr5.4:51927181-51927200 | MS.gene21312:CDS | 45.0% |
| !! | AAGTTGTATGATGGACTGCC+TGG | - | chr5.4:51929526-51929545 | None:intergenic | 45.0% |
| !! | ACCTTTAAGGCAGGAGCAAT+AGG | - | chr5.4:51928666-51928685 | None:intergenic | 45.0% |
| !! | GACTTGCTAAAAACAGCAGG+CGG | - | chr5.4:51929928-51929947 | None:intergenic | 45.0% |
| !! | AATATAAACAAAAATAAAAA+AGG | - | chr5.4:51929181-51929200 | None:intergenic | 5.0% |
| ACCAAGCCTTGCTGAGTACT+TGG | + | chr5.4:51929957-51929976 | MS.gene21312:CDS | 50.0% | |
| ACCGGGTTTCTATAGGGTGT+TGG | - | chr5.4:51929415-51929434 | None:intergenic | 50.0% | |
| AGAAGCCATGTTTCAGGACG+GGG | + | chr5.4:51929703-51929722 | MS.gene21312:CDS | 50.0% | |
| ATAGAGGGATCCTGGGTAGT+GGG | + | chr5.4:51927437-51927456 | MS.gene21312:intron | 50.0% | |
| CACCCTATAGAAACCCGGTT+TGG | + | chr5.4:51929416-51929435 | MS.gene21312:CDS | 50.0% | |
| CAGAAGCCATGTTTCAGGAC+GGG | + | chr5.4:51929702-51929721 | MS.gene21312:CDS | 50.0% | |
| CCTCTAGGTCCATTCCAAAC+CGG | - | chr5.4:51929433-51929452 | None:intergenic | 50.0% | |
| CCTTGCTGAGTACTTGGCTT+CGG | + | chr5.4:51929963-51929982 | MS.gene21312:CDS | 50.0% | |
| CGACATTGTCACGTTGACAC+GGG | + | chr5.4:51927335-51927354 | MS.gene21312:intron | 50.0% | |
| CTCTAGGTCCATTCCAAACC+GGG | - | chr5.4:51929432-51929451 | None:intergenic | 50.0% | |
| CTGCCTGGTGATTCAAACCT+AGG | - | chr5.4:51929511-51929530 | None:intergenic | 50.0% | |
| GATCAAGTTCTCATGGTCGC+TGG | + | chr5.4:51929737-51929756 | MS.gene21312:CDS | 50.0% | |
| GATCGTGCTCAAGATTCTGG+TGG | + | chr5.4:51926962-51926981 | MS.gene21312:CDS | 50.0% | |
| GCCAACACCCTATAGAAACC+CGG | + | chr5.4:51929411-51929430 | MS.gene21312:CDS | 50.0% | |
| GCTGATCGTGCTCAAGATTC+TGG | + | chr5.4:51926959-51926978 | MS.gene21312:CDS | 50.0% | |
| GGATAAGTACCACCACCTGA+TGG | - | chr5.4:51929484-51929503 | None:intergenic | 50.0% | |
| TTATACTGAGGAGGGCCTCT+AGG | - | chr5.4:51929448-51929467 | None:intergenic | 50.0% | |
| TTGCCTGACCCAGGTTTAGA+AGG | + | chr5.4:51928846-51928865 | MS.gene21312:intron | 50.0% | |
| TTTAGAGGAAGAGGAGGAGG+AGG | - | chr5.4:51927151-51927170 | None:intergenic | 50.0% | |
| TTTCCACGGATCTTCGACCA+TGG | - | chr5.4:51929809-51929828 | None:intergenic | 50.0% | |
| ! | AGCAAGGCTTGGTCCAGAAT+TGG | - | chr5.4:51929950-51929969 | None:intergenic | 50.0% |
| ! | CTGCGAACCAGAAATGGACT+GGG | + | chr5.4:51928017-51928036 | MS.gene21312:intron | 50.0% |
| ! | GCTCAAGATTCTGGTGGTGA+AGG | + | chr5.4:51926968-51926987 | MS.gene21312:CDS | 50.0% |
| ! | GGGTTTAGGGTTGAAAACGG+AGG | + | chr5.4:51927840-51927859 | MS.gene21312:intron | 50.0% |
| ! | GTTTAGGGTGAACTGAGCGA+AGG | + | chr5.4:51927754-51927773 | MS.gene21312:intron | 50.0% |
| !! | CTGCCGTAAACCTTTAAGGC+AGG | - | chr5.4:51928675-51928694 | None:intergenic | 50.0% |
| !! | GGTGTTGGCAATGCTTGAGT+GGG | - | chr5.4:51929400-51929419 | None:intergenic | 50.0% |
| !! | TTGGGCCATTGATTCATGCC+TGG | - | chr5.4:51929553-51929572 | None:intergenic | 50.0% |
| AAGCGGCTGCGAACCAGAAA+TGG | + | chr5.4:51928011-51928030 | MS.gene21312:intron | 55.0% | |
| ACCCGATCTCCCACCTAAAG+CGG | + | chr5.4:51927994-51928013 | MS.gene21312:intron | 55.0% | |
| AGGGGTCAACCCTTGTTGCT+TGG | + | chr5.4:51928807-51928826 | MS.gene21312:intron | 55.0% | |
| CACTACCCCGTCCTGAAACA+TGG | - | chr5.4:51929711-51929730 | None:intergenic | 55.0% | |
| CATGTTTCAGGACGGGGTAG+TGG | + | chr5.4:51929709-51929728 | MS.gene21312:CDS | 55.0% | |
| CCATTACGTCCATCAGGTGG+TGG | + | chr5.4:51929472-51929491 | MS.gene21312:CDS | 55.0% | |
| CCGAAGCCAAGTACTCAGCA+AGG | - | chr5.4:51929966-51929985 | None:intergenic | 55.0% | |
| CCTTTGTGATCCCACTACCC+AGG | - | chr5.4:51927450-51927469 | None:intergenic | 55.0% | |
| CGCTGGTCCAATGAAGACAG+TGG | + | chr5.4:51929754-51929773 | MS.gene21312:CDS | 55.0% | |
| CTCCGGGATCCGTCCAAAAT+TGG | + | chr5.4:51928086-51928105 | MS.gene21312:intron | 55.0% | |
| GATAGAGGGATCCTGGGTAG+TGG | + | chr5.4:51927436-51927455 | MS.gene21312:intron | 55.0% | |
| GCCAAGTACTCAGCAAGGCT+TGG | - | chr5.4:51929961-51929980 | None:intergenic | 55.0% | |
| GCTGCGAACCAGAAATGGAC+TGG | + | chr5.4:51928016-51928035 | MS.gene21312:intron | 55.0% | |
| GGCAATGCTTGAGTGGGAGA+TGG | - | chr5.4:51929394-51929413 | None:intergenic | 55.0% | |
| GTGGGAGATGGAGACATCTG+CGG | - | chr5.4:51929382-51929401 | None:intergenic | 55.0% | |
| TAGGGTGAACTGAGCGAAGG+CGG | + | chr5.4:51927757-51927776 | MS.gene21312:intron | 55.0% | |
| TTGGCCGAGATTGACTGCCT+AGG | + | chr5.4:51928105-51928124 | MS.gene21312:intron | 55.0% | |
| ! | AGCCGCTTTAGGTGGGAGAT+CGG | - | chr5.4:51927999-51928018 | None:intergenic | 55.0% |
| ! | CAATTTTGGACGGATCCCGG+AGG | - | chr5.4:51928088-51928107 | None:intergenic | 55.0% |
| ! | CCACCACCTGATGGACGTAA+TGG | - | chr5.4:51929475-51929494 | None:intergenic | 55.0% |
| ! | GGCCAATTTTGGACGGATCC+CGG | - | chr5.4:51928091-51928110 | None:intergenic | 55.0% |
| ! | GGGGTCAACCCTTGTTGCTT+GGG | + | chr5.4:51928808-51928827 | MS.gene21312:intron | 55.0% |
| ! | GTCAACCCTTGTTGCTTGGG+AGG | + | chr5.4:51928811-51928830 | MS.gene21312:intron | 55.0% |
| !! | CCGGTTTGGAATGGACCTAG+AGG | + | chr5.4:51929430-51929449 | MS.gene21312:CDS | 55.0% |
| !! | CCTGGGTAGTGGGATCACAA+AGG | + | chr5.4:51927447-51927466 | MS.gene21312:intron | 55.0% |
| !! | GGGTGTTGGCAATGCTTGAG+TGG | - | chr5.4:51929401-51929420 | None:intergenic | 55.0% |
| !! | TTCTGGTTCGCAGCCGCTTT+AGG | - | chr5.4:51928010-51928029 | None:intergenic | 55.0% |
| AGAGGAAGAGGAGGAGGAGG+TGG | - | chr5.4:51927148-51927167 | None:intergenic | 60.0% | |
| CCTAACTCTAGTCGAGGGCG+AGG | + | chr5.4:51929658-51929677 | MS.gene21312:CDS | 60.0% | |
| CCTCGCCCTCGACTAGAGTT+AGG | - | chr5.4:51929661-51929680 | None:intergenic | 60.0% | |
| GAGTCCTGTTCATGTCCGGC+CGG | + | chr5.4:51927114-51927133 | MS.gene21312:CDS | 60.0% | |
| GGAGGAGGTGGCAAATGCTC+CGG | - | chr5.4:51927136-51927155 | None:intergenic | 60.0% | |
| GGTCCATGGTCGAAGATCCG+TGG | + | chr5.4:51929803-51929822 | MS.gene21312:CDS | 60.0% | |
| TAGGTGGGAGATCGGGTTCC+CGG | - | chr5.4:51927991-51928010 | None:intergenic | 60.0% | |
| ! | GCCGCTTTAGGTGGGAGATC+GGG | - | chr5.4:51927998-51928017 | None:intergenic | 60.0% |
| ! | GCGGCGGAGGTGTGAATGTT+TGG | + | chr5.4:51927792-51927811 | MS.gene21312:intron | 60.0% |
| ! | GGTTCGCAGCCGCTTTAGGT+GGG | - | chr5.4:51928006-51928025 | None:intergenic | 60.0% |
| ! | TGGTTCGCAGCCGCTTTAGG+TGG | - | chr5.4:51928007-51928026 | None:intergenic | 60.0% |
| !! | TCAGGACGGGGTAGTGGACA+AGG | + | chr5.4:51929715-51929734 | MS.gene21312:CDS | 60.0% |
| AAGGCGGTGGTGAAGGAGGG+CGG | + | chr5.4:51927773-51927792 | MS.gene21312:intron | 65.0% | |
| ACTCTAGTCGAGGGCGAGGC+AGG | + | chr5.4:51929662-51929681 | MS.gene21312:CDS | 65.0% | |
| AGCGAAGGCGGTGGTGAAGG+AGG | + | chr5.4:51927769-51927788 | MS.gene21312:intron | 65.0% | |
| CGCAACCGGAGCATGCGAAC+CGG | + | chr5.4:51927969-51927988 | MS.gene21312:intron | 65.0% | |
| CGGTTCGCATGCTCCGGTTG+CGG | - | chr5.4:51927971-51927990 | None:intergenic | 65.0% | |
| CTCTAGTCGAGGGCGAGGCA+GGG | + | chr5.4:51929663-51929682 | MS.gene21312:CDS | 65.0% | |
| CTGAGCGAAGGCGGTGGTGA+AGG | + | chr5.4:51927766-51927785 | MS.gene21312:intron | 65.0% | |
| GAGGTGGCAAATGCTCCGGC+CGG | - | chr5.4:51927132-51927151 | None:intergenic | 65.0% | |
| GCAACCGGAGCATGCGAACC+GGG | + | chr5.4:51927970-51927989 | MS.gene21312:intron | 65.0% | |
| GCGAAGGCGGTGGTGAAGGA+GGG | + | chr5.4:51927770-51927789 | MS.gene21312:intron | 65.0% | |
| GGTGAACTGAGCGAAGGCGG+TGG | + | chr5.4:51927760-51927779 | MS.gene21312:intron | 65.0% | |
| GGTTCGCATGCTCCGGTTGC+GGG | - | chr5.4:51927970-51927989 | None:intergenic | 65.0% | |
| TCTAGTCGAGGGCGAGGCAG+GGG | + | chr5.4:51929664-51929683 | MS.gene21312:CDS | 65.0% | |
| TGCTCCGGCCGGACATGAAC+AGG | - | chr5.4:51927121-51927140 | None:intergenic | 65.0% | |
| TTGGACGGATCCCGGAGGAG+CGG | - | chr5.4:51928083-51928102 | None:intergenic | 65.0% | |
| ! | GGTTCCCGGTTCGCATGCTC+CGG | - | chr5.4:51927977-51927996 | None:intergenic | 65.0% |
| GAGGGCGAGGCAGGGGATTC+TGG | + | chr5.4:51929671-51929690 | MS.gene21312:CDS | 70.0% | |
| ! | AGGTGTGCGTGCCGCTCCTC+CGG | + | chr5.4:51928069-51928088 | MS.gene21312:intron | 70.0% |
| GCGGTGGTGAAGGAGGGCGG+CGG | + | chr5.4:51927776-51927795 | MS.gene21312:intron | 75.0% | |
| GTGGTGAAGGAGGGCGGCGG+AGG | + | chr5.4:51927779-51927798 | MS.gene21312:intron | 75.0% | |
| ! | GGTGTGCGTGCCGCTCCTCC+GGG | + | chr5.4:51928070-51928089 | MS.gene21312:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 51926908 | 51930023 | 51926908 | ID=MS.gene21312 |
| chr5.4 | mRNA | 51926908 | 51930023 | 51926908 | ID=MS.gene21312.t1;Parent=MS.gene21312 |
| chr5.4 | exon | 51926908 | 51927202 | 51926908 | ID=MS.gene21312.t1.exon1;Parent=MS.gene21312.t1 |
| chr5.4 | CDS | 51926908 | 51927202 | 51926908 | ID=cds.MS.gene21312.t1;Parent=MS.gene21312.t1 |
| chr5.4 | exon | 51929368 | 51930023 | 51929368 | ID=MS.gene21312.t1.exon2;Parent=MS.gene21312.t1 |
| chr5.4 | CDS | 51929368 | 51930023 | 51929368 | ID=cds.MS.gene21312.t1;Parent=MS.gene21312.t1 |
| Gene Sequence |
| Protein sequence |
