Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050077.t1 | XP_003615162.1 | 95.1 | 183 | 9 | 0 | 1 | 183 | 1 | 183 | 1.20E-51 | 213 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050077.t1 | Q9S7L9 | 91.2 | 80 | 6 | 1 | 105 | 183 | 111 | 190 | 1.0e-40 | 167.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050077.t1 | G7KAG6 | 95.1 | 183 | 9 | 0 | 1 | 183 | 1 | 183 | 8.4e-52 | 213.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050077 | MS.gene69206 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene050077 | MS.gene86351 | 0.817385 | 3.39E-52 | -1.69E-46 |
| MS.gene050077 | MS.gene89062 | 0.808583 | 2.88E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050077.t1 | MTR_5g064600 | 97.268 | 183 | 5 | 0 | 1 | 183 | 1 | 183 | 2.97e-126 | 353 |
| MS.gene050077.t1 | MTR_4g129710 | 81.081 | 74 | 14 | 0 | 110 | 183 | 9 | 82 | 1.34e-46 | 147 |
| MS.gene050077.t1 | MTR_5g013865 | 46.667 | 60 | 31 | 1 | 122 | 180 | 71 | 130 | 1.91e-18 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050077.t1 | AT1G22450 | 58.031 | 193 | 68 | 8 | 1 | 183 | 1 | 190 | 4.87e-58 | 180 |
| MS.gene050077.t1 | AT4G28060 | 84.000 | 75 | 12 | 0 | 109 | 183 | 4 | 78 | 4.22e-47 | 149 |
| MS.gene050077.t1 | AT5G57815 | 80.000 | 75 | 15 | 0 | 109 | 183 | 4 | 78 | 1.24e-45 | 145 |
| MS.gene050077.t1 | AT1G32710 | 47.368 | 57 | 29 | 1 | 115 | 170 | 59 | 115 | 2.34e-15 | 69.7 |
Find 44 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAATGTCACCTTAATTTC+AGG | 0.274852 | 5.4:-50364856 | None:intergenic |
| TTAGCAAACTTATCGCATTC+TGG | 0.315240 | 5.4:-50365190 | None:intergenic |
| TGCTCTTTGCCCTGGCGAAT+GGG | 0.316213 | 5.4:+50365222 | MS.gene050077:CDS |
| TCCACAGGAGTAGCCTCCTT+TGG | 0.353829 | 5.4:-50364667 | None:intergenic |
| TCAACTTCCTCGACTGCAAC+AGG | 0.367900 | 5.4:-50364640 | None:intergenic |
| CGAAGAGAAACCTGAAATTA+AGG | 0.388584 | 5.4:+50364846 | MS.gene050077:CDS |
| GTGCTCTTTGCCCTGGCGAA+TGG | 0.398969 | 5.4:+50365221 | MS.gene050077:CDS |
| CTTAATTTCAGGTTTCTCTT+CGG | 0.421905 | 5.4:-50364845 | None:intergenic |
| ACCACAGGGGCAGCAGGAAT+TGG | 0.431838 | 5.4:-50364718 | None:intergenic |
| AGCGAGAGTTTGAGAGCTGT+TGG | 0.435085 | 5.4:-50363522 | None:intergenic |
| ACTGTTGTCGAAGAAAATTC+TGG | 0.436657 | 5.4:+50364808 | MS.gene050077:CDS |
| TTTGATTAGTAGTTGGAAAA+CGG | 0.436848 | 5.4:-50364999 | None:intergenic |
| TGCCTTGTTTGATTAGTAGT+TGG | 0.437774 | 5.4:-50365006 | None:intergenic |
| CTGCTTTCTTCAGCAACCAC+AGG | 0.440887 | 5.4:-50364733 | None:intergenic |
| ACCGATGATATTCAATGTAT+CGG | 0.454130 | 5.4:-50365038 | None:intergenic |
| TTCCCACTTACAGCGGGCCT+GGG | 0.456685 | 5.4:-50369008 | None:intergenic |
| GCGAGAGTTTGAGAGCTGTT+GGG | 0.465356 | 5.4:-50363521 | None:intergenic |
| TGGAATGAGCAACGTGAGAA+TGG | 0.466781 | 5.4:+50368979 | MS.gene050077:CDS |
| GTTGGAAAACGGAAATCTAC+TGG | 0.475723 | 5.4:-50364988 | None:intergenic |
| GAAATACATACCCATTCGCC+AGG | 0.503273 | 5.4:-50365232 | None:intergenic |
| GTGCAGATGCGTAGCTGCAA+AGG | 0.504908 | 5.4:+50365156 | MS.gene050077:intron |
| CCGATGATATTCAATGTATC+GGG | 0.509191 | 5.4:-50365037 | None:intergenic |
| TATTATCGTGCTCTTTGCCC+TGG | 0.512644 | 5.4:+50365214 | MS.gene050077:CDS |
| CCCGATACATTGAATATCAT+CGG | 0.512705 | 5.4:+50365037 | MS.gene050077:CDS |
| CGTGAGAATGGAACATTCCC+AGG | 0.527385 | 5.4:+50368991 | MS.gene050077:CDS |
| TTCTCAACAACAGCTTCCAC+AGG | 0.531965 | 5.4:-50364682 | None:intergenic |
| TCAGCAACCACAGGGGCAGC+AGG | 0.538575 | 5.4:-50364724 | None:intergenic |
| TGCAGATGCGTAGCTGCAAA+GGG | 0.545008 | 5.4:+50365157 | MS.gene050077:intron |
| TGCTTTCTTCAGCAACCACA+GGG | 0.546805 | 5.4:-50364732 | None:intergenic |
| TTCTTCAACAGCAGGAGGGG+TGG | 0.556491 | 5.4:-50364761 | None:intergenic |
| GACATATTCCCACTTACAGC+GGG | 0.557299 | 5.4:-50369014 | None:intergenic |
| AGAAAATTCTGGTGATCAAG+AGG | 0.560378 | 5.4:+50364819 | MS.gene050077:CDS |
| CCGTGCATCAGGTTGACAGA+TGG | 0.572171 | 5.4:+50368959 | MS.gene050077:intron |
| ACCAATTCCTGCTGCCCCTG+TGG | 0.597419 | 5.4:+50364717 | MS.gene050077:CDS |
| TGTTGAAGAAAACGCTCTAG+AGG | 0.604689 | 5.4:+50364774 | MS.gene050077:CDS |
| TTTGTAGGAATACTATGTGA+AGG | 0.608539 | 5.4:+50364567 | MS.gene050077:intron |
| CGAGGAAGTTGAAAAGCCAA+AGG | 0.613030 | 5.4:+50364651 | MS.gene050077:CDS |
| GCCAAAGGAGGCTACTCCTG+TGG | 0.618743 | 5.4:+50364666 | MS.gene050077:CDS |
| TTCCAACTACTAATCAAACA+AGG | 0.661005 | 5.4:+50365004 | MS.gene050077:CDS |
| GGAAGTTGAAAAGCCAAAGG+AGG | 0.661152 | 5.4:+50364654 | MS.gene050077:CDS |
| GGACATATTCCCACTTACAG+CGG | 0.680467 | 5.4:-50369015 | None:intergenic |
| CAGCTCTCAAACTCTCGCTG+AGG | 0.685473 | 5.4:+50363526 | MS.gene050077:CDS |
| AAATACATACCCATTCGCCA+GGG | 0.687039 | 5.4:-50365231 | None:intergenic |
| GCTTTCTTCAGCAACCACAG+GGG | 0.759939 | 5.4:-50364731 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTATTAAAATTAACTAAA+AGG | + | chr5.4:50364165-50364184 | MS.gene050077:intron | 10.0% |
| !!! | TAGTTAATTTTAATAGTATT+GGG | - | chr5.4:50364163-50364182 | None:intergenic | 10.0% |
| !!! | TTAGTTAATTTTAATAGTAT+TGG | - | chr5.4:50364164-50364183 | None:intergenic | 10.0% |
| !! | AAATGATTAATATAACTACA+TGG | - | chr5.4:50363933-50363952 | None:intergenic | 15.0% |
| !! | AATAAGAAATTAAAATGCTT+AGG | - | chr5.4:50366338-50366357 | None:intergenic | 15.0% |
| !! | AATGATTAATATAACTACAT+GGG | - | chr5.4:50363932-50363951 | None:intergenic | 15.0% |
| !! | ACTATTAAAATTAACTGAAA+AGG | - | chr5.4:50364279-50364298 | None:intergenic | 15.0% |
| !! | AGTTAATAAAAAGAAAATTC+AGG | - | chr5.4:50368755-50368774 | None:intergenic | 15.0% |
| !! | ATAATGTTAAATGTAACAAA+AGG | - | chr5.4:50365469-50365488 | None:intergenic | 15.0% |
| !! | ATTAATTAAGAAAAGATGTT+CGG | + | chr5.4:50368200-50368219 | MS.gene050077:intron | 15.0% |
| !! | TAAATATTCATGTATATCAA+TGG | + | chr5.4:50365674-50365693 | MS.gene050077:intron | 15.0% |
| !! | TACATAATACATTATAAAAC+TGG | - | chr5.4:50364509-50364528 | None:intergenic | 15.0% |
| !! | TTAAAAAGTAAAAACTAAGA+AGG | - | chr5.4:50365718-50365737 | None:intergenic | 15.0% |
| !!! | AATATTTTTTATTATCTGCT+AGG | + | chr5.4:50365262-50365281 | MS.gene050077:intron | 15.0% |
| !!! | ATTTAGTTTATTTTTTGAGA+TGG | + | chr5.4:50365824-50365843 | MS.gene050077:intron | 15.0% |
| !!! | ATTTTTATTGTGTTCTTAAA+TGG | + | chr5.4:50368817-50368836 | MS.gene050077:intron | 15.0% |
| !!! | CAGTTAATTTTAATAGTTTA+TGG | + | chr5.4:50364282-50364301 | MS.gene050077:intron | 15.0% |
| !!! | CTAATATTTTTCTATAAATG+TGG | - | chr5.4:50367986-50368005 | None:intergenic | 15.0% |
| !!! | TTTTTCATTCGAAAAATAAA+TGG | - | chr5.4:50363630-50363649 | None:intergenic | 15.0% |
| !! | AAAAATAAACTAAATCCAAG+TGG | - | chr5.4:50365819-50365838 | None:intergenic | 20.0% |
| !! | AAAAGAAATGCAACAAAAAA+TGG | - | chr5.4:50368696-50368715 | None:intergenic | 20.0% |
| !! | AAAATTACTAAAATGTGAAG+AGG | + | chr5.4:50365867-50365886 | MS.gene050077:intron | 20.0% |
| !! | AAGAATTTAGGAGAAAAAAA+AGG | + | chr5.4:50366049-50366068 | MS.gene050077:intron | 20.0% |
| !! | ACATCACATAGATTATAATT+TGG | - | chr5.4:50368503-50368522 | None:intergenic | 20.0% |
| !! | CAAAATGATATTTGTAAAAG+AGG | - | chr5.4:50368871-50368890 | None:intergenic | 20.0% |
| !! | CACTTGAAAAATTGTATTAA+TGG | - | chr5.4:50366423-50366442 | None:intergenic | 20.0% |
| !! | TAATAGTTTATGGATCAAAT+TGG | + | chr5.4:50364292-50364311 | MS.gene050077:intron | 20.0% |
| !! | TAGATAATTAGAATGACAAA+AGG | + | chr5.4:50364027-50364046 | MS.gene050077:intron | 20.0% |
| !! | TCAAATATCAAGATATTGAA+AGG | - | chr5.4:50364941-50364960 | None:intergenic | 20.0% |
| !! | TCCATAAAAATAAAAGTCAA+CGG | - | chr5.4:50365074-50365093 | None:intergenic | 20.0% |
| !! | TTGCAAAAAAGTTTATGATT+TGG | - | chr5.4:50365505-50365524 | None:intergenic | 20.0% |
| !!! | AGTTTATGTGTTTTTTTGTT+AGG | + | chr5.4:50364440-50364459 | MS.gene050077:intron | 20.0% |
| !!! | CAAAAATGTTTTTGATTTGT+AGG | + | chr5.4:50364552-50364571 | MS.gene050077:intron | 20.0% |
| !!! | CATTTTCTTATATGGTATAA+TGG | + | chr5.4:50367021-50367040 | MS.gene050077:intron | 20.0% |
| !!! | CTTCACATTTTAGTAATTTT+GGG | - | chr5.4:50365867-50365886 | None:intergenic | 20.0% |
| !!! | CTTTTCTTAATTAATATGCT+AGG | - | chr5.4:50368195-50368214 | None:intergenic | 20.0% |
| !!! | GCACGTTTTTTTTTTTTTTT+TGG | - | chr5.4:50365587-50365606 | None:intergenic | 20.0% |
| !!! | GTATTGTTTTTATGAAGAAT+TGG | + | chr5.4:50364403-50364422 | MS.gene050077:intron | 20.0% |
| !!! | TCTTCACATTTTAGTAATTT+TGG | - | chr5.4:50365868-50365887 | None:intergenic | 20.0% |
| ! | AAAATTTCTCCATGTCTTAA+AGG | - | chr5.4:50367428-50367447 | None:intergenic | 25.0% |
| ! | AAACACAGAACAAAAGAAAA+AGG | + | chr5.4:50367942-50367961 | MS.gene050077:intron | 25.0% |
| ! | AAATGTTGGCATGAAAAATT+AGG | + | chr5.4:50363754-50363773 | MS.gene050077:intron | 25.0% |
| ! | AAGGTTTATGTTAGAAGAAA+GGG | + | chr5.4:50367631-50367650 | MS.gene050077:intron | 25.0% |
| ! | AATAGGTGAAAAAATTGTGA+AGG | + | chr5.4:50368131-50368150 | MS.gene050077:intron | 25.0% |
| ! | AATTGGCATTAATATTTGTG+TGG | + | chr5.4:50368564-50368583 | MS.gene050077:intron | 25.0% |
| ! | AATTGTATTAATGGTGATTC+AGG | - | chr5.4:50366414-50366433 | None:intergenic | 25.0% |
| ! | ACTACATAGATAACATTGAT+TGG | - | chr5.4:50363875-50363894 | None:intergenic | 25.0% |
| ! | AGTTAAAGATGATAAAGCAA+TGG | - | chr5.4:50365766-50365785 | None:intergenic | 25.0% |
| ! | ATAAATGTCACCTTAATTTC+AGG | - | chr5.4:50364859-50364878 | None:intergenic | 25.0% |
| ! | ATACAGAGAATAAATTGTGT+TGG | + | chr5.4:50367207-50367226 | MS.gene050077:intron | 25.0% |
| ! | ATGAGAATTGGAAATTTATC+AGG | - | chr5.4:50368271-50368290 | None:intergenic | 25.0% |
| ! | ATGGATGTGAGTATAATTTA+GGG | + | chr5.4:50364252-50364271 | MS.gene050077:intron | 25.0% |
| ! | ATTAAAATAAAGATCCTAGG+AGG | - | chr5.4:50363601-50363620 | None:intergenic | 25.0% |
| ! | ATTGGCATTAATATTTGTGT+GGG | + | chr5.4:50368565-50368584 | MS.gene050077:intron | 25.0% |
| ! | CAAAACTTGCAAATTAGTAT+TGG | - | chr5.4:50364062-50364081 | None:intergenic | 25.0% |
| ! | CAAAAGAAAAACTAAGTTGT+AGG | - | chr5.4:50365439-50365458 | None:intergenic | 25.0% |
| ! | CAACGGTTAAAATATAAGAA+CGG | - | chr5.4:50365128-50365147 | None:intergenic | 25.0% |
| ! | CAATGCTTAGTTAAACAAAA+GGG | - | chr5.4:50368471-50368490 | None:intergenic | 25.0% |
| ! | CATTCGAAAAATAAATGGAT+TGG | - | chr5.4:50363625-50363644 | None:intergenic | 25.0% |
| ! | GATAATTAGTAAGGACTATT+GGG | + | chr5.4:50368642-50368661 | MS.gene050077:intron | 25.0% |
| ! | GATCATTGAATTGGTATAAA+TGG | + | chr5.4:50366827-50366846 | MS.gene050077:intron | 25.0% |
| ! | GCATCAAAATAACAAAATCA+AGG | - | chr5.4:50363668-50363687 | None:intergenic | 25.0% |
| ! | GGAATTAAAATAAAGATCCT+AGG | - | chr5.4:50363604-50363623 | None:intergenic | 25.0% |
| ! | TATCTGTAAGTAAATCTTGT+TGG | - | chr5.4:50365305-50365324 | None:intergenic | 25.0% |
| ! | TATGCATATTACCAAATTAG+AGG | + | chr5.4:50366164-50366183 | MS.gene050077:intron | 25.0% |
| ! | TATGTAAGACTTAAAGATGA+AGG | + | chr5.4:50364523-50364542 | MS.gene050077:intron | 25.0% |
| ! | TTGAGAAACATCATCAAATT+CGG | - | chr5.4:50368009-50368028 | None:intergenic | 25.0% |
| ! | TTTGATTAGTAGTTGGAAAA+CGG | - | chr5.4:50365002-50365021 | None:intergenic | 25.0% |
| !! | AGAGGAAATTCTTCTTTTAA+GGG | + | chr5.4:50365620-50365639 | MS.gene050077:intron | 25.0% |
| !! | ATAACATTGATTGGACAAAA+TGG | - | chr5.4:50363866-50363885 | None:intergenic | 25.0% |
| !! | TTTATGATTTGGCATAAAGT+CGG | - | chr5.4:50365494-50365513 | None:intergenic | 25.0% |
| !!! | AATAAATTGTGTTGGTGTTA+GGG | + | chr5.4:50367215-50367234 | MS.gene050077:intron | 25.0% |
| !!! | ACCGTTGACTTTTATTTTTA+TGG | + | chr5.4:50365070-50365089 | MS.gene050077:intron | 25.0% |
| !!! | AGATTTTGAGGAAAGAATTT+AGG | + | chr5.4:50366037-50366056 | MS.gene050077:intron | 25.0% |
| !!! | CTTTTGTTTAACTAAGCATT+GGG | + | chr5.4:50368470-50368489 | MS.gene050077:intron | 25.0% |
| !!! | TAGAAAAATCCAGGTTTTAA+GGG | - | chr5.4:50366909-50366928 | None:intergenic | 25.0% |
| !!! | TCACCTATTTTTTGTAGTAT+GGG | - | chr5.4:50368120-50368139 | None:intergenic | 25.0% |
| !!! | TTATGTGTTTTTTTGTTAGG+TGG | + | chr5.4:50364443-50364462 | MS.gene050077:intron | 25.0% |
| !!! | TTCACCTATTTTTTGTAGTA+TGG | - | chr5.4:50368121-50368140 | None:intergenic | 25.0% |
| !!! | TTTAAGACATGGAGAAATTT+TGG | + | chr5.4:50367427-50367446 | MS.gene050077:intron | 25.0% |
| AAAAAAAAGGAAAAGTGGCT+CGG | + | chr5.4:50366062-50366081 | MS.gene050077:intron | 30.0% | |
| AACCAAATCAACACTTGAAT+TGG | + | chr5.4:50368790-50368809 | MS.gene050077:intron | 30.0% | |
| AAGTAGAATTGGAAATTGAG+AGG | - | chr5.4:50363573-50363592 | None:intergenic | 30.0% | |
| AATATGCTAGGATTACCAAA+GGG | - | chr5.4:50368183-50368202 | None:intergenic | 30.0% | |
| AATGATCATTTCTTCCAAAC+AGG | + | chr5.4:50368324-50368343 | MS.gene050077:intron | 30.0% | |
| AATTAAGAAAAGATGTTCGG+TGG | + | chr5.4:50368203-50368222 | MS.gene050077:intron | 30.0% | |
| AATTGCATCATTTGCTTTGT+TGG | + | chr5.4:50365375-50365394 | MS.gene050077:intron | 30.0% | |
| ACACAATCTTAGATAGTTGA+TGG | + | chr5.4:50367074-50367093 | MS.gene050077:intron | 30.0% | |
| ACAGAACAAAAGAAAAAGGA+GGG | + | chr5.4:50367946-50367965 | MS.gene050077:intron | 30.0% | |
| ACCGATGATATTCAATGTAT+CGG | - | chr5.4:50365041-50365060 | None:intergenic | 30.0% | |
| ACTTCAAAAGGATATCAAAC+AGG | - | chr5.4:50367380-50367399 | None:intergenic | 30.0% | |
| AGCTCAATTATGATGAGAAT+TGG | - | chr5.4:50368283-50368302 | None:intergenic | 30.0% | |
| AGGAGAAAAAAAAGGAAAAG+TGG | + | chr5.4:50366057-50366076 | MS.gene050077:intron | 30.0% | |
| ATCAAGGTAATACAATTGCT+AGG | - | chr5.4:50366386-50366405 | None:intergenic | 30.0% | |
| ATCAAGGTGATTTCAGTTTA+TGG | - | chr5.4:50368727-50368746 | None:intergenic | 30.0% | |
| ATGTTGGGAAATGTTTGAAT+TGG | + | chr5.4:50367346-50367365 | MS.gene050077:intron | 30.0% | |
| ATTCTACTTAAATACCTCCT+AGG | + | chr5.4:50363584-50363603 | MS.gene050077:intron | 30.0% | |
| ATTGAAGCTAATCAAGATCT+AGG | - | chr5.4:50363708-50363727 | None:intergenic | 30.0% | |
| ATTGAGCTATTATTTGAGTG+TGG | + | chr5.4:50368295-50368314 | MS.gene050077:intron | 30.0% | |
| ATTGGAAATTGAGAGGTAAA+AGG | - | chr5.4:50363566-50363585 | None:intergenic | 30.0% | |
| CAAGTTAGGGATAATTAGTA+AGG | + | chr5.4:50368633-50368652 | MS.gene050077:intron | 30.0% | |
| CCAATGCTTAGTTAAACAAA+AGG | - | chr5.4:50368472-50368491 | None:intergenic | 30.0% | |
| GAAGGTTTATGTTAGAAGAA+AGG | + | chr5.4:50367630-50367649 | MS.gene050077:intron | 30.0% | |
| GATGGATGTGAGTATAATTT+AGG | + | chr5.4:50364251-50364270 | MS.gene050077:intron | 30.0% | |
| GATGTTTCTCAATAACCAAA+TGG | + | chr5.4:50368017-50368036 | MS.gene050077:intron | 30.0% | |
| GATTTAAGCATGAAGATACA+AGG | + | chr5.4:50367496-50367515 | MS.gene050077:intron | 30.0% | |
| GATTTAGAAGAGAAGATTAC+TGG | + | chr5.4:50368539-50368558 | MS.gene050077:intron | 30.0% | |
| GCATCCAAAATGAATAATGA+CGG | - | chr5.4:50364382-50364401 | None:intergenic | 30.0% | |
| GCTAATGTCAAATTTCTATC+TGG | + | chr5.4:50365334-50365353 | MS.gene050077:intron | 30.0% | |
| GGATAATTAGTAAGGACTAT+TGG | + | chr5.4:50368641-50368660 | MS.gene050077:intron | 30.0% | |
| GTAATATGCATAGTTGTGAA+TGG | - | chr5.4:50366156-50366175 | None:intergenic | 30.0% | |
| GTACCCATACTACAAAAAAT+AGG | + | chr5.4:50368114-50368133 | MS.gene050077:intron | 30.0% | |
| GTCATTAGAAGGTTTATGTT+GGG | + | chr5.4:50366269-50366288 | MS.gene050077:intron | 30.0% | |
| GTGATATGAGAACAATAGTT+TGG | + | chr5.4:50367608-50367627 | MS.gene050077:intron | 30.0% | |
| GTTACATGAATTTGTAGTCA+AGG | + | chr5.4:50366602-50366621 | MS.gene050077:intron | 30.0% | |
| GTTGTTACACTTCTAAATGT+TGG | + | chr5.4:50363740-50363759 | MS.gene050077:intron | 30.0% | |
| GTTTATGTTGGGAATTACTT+GGG | + | chr5.4:50366280-50366299 | MS.gene050077:intron | 30.0% | |
| TAATATGCTAGGATTACCAA+AGG | - | chr5.4:50368184-50368203 | None:intergenic | 30.0% | |
| TAGTTTATGGACCAATTTGA+TGG | + | chr5.4:50364233-50364252 | MS.gene050077:intron | 30.0% | |
| TATACTCACATCCATCAAAT+TGG | - | chr5.4:50364247-50364266 | None:intergenic | 30.0% | |
| TATGAGAACAATAGTTTGGA+AGG | + | chr5.4:50367612-50367631 | MS.gene050077:intron | 30.0% | |
| TATTAACTCCATCAATGGTT+TGG | - | chr5.4:50367190-50367209 | None:intergenic | 30.0% | |
| TGTCATTAGAAGGTTTATGT+TGG | + | chr5.4:50366268-50366287 | MS.gene050077:intron | 30.0% | |
| TGTTGGGAAATGTTTGAATT+GGG | + | chr5.4:50367347-50367366 | MS.gene050077:intron | 30.0% | |
| TTCCAACTACTAATCAAACA+AGG | + | chr5.4:50365004-50365023 | MS.gene050077:CDS | 30.0% | |
| TTGAGCTATTATTTGAGTGT+GGG | + | chr5.4:50368296-50368315 | MS.gene050077:intron | 30.0% | |
| TTGGCATTAATATTTGTGTG+GGG | + | chr5.4:50368566-50368585 | MS.gene050077:intron | 30.0% | |
| TTGTAGTATGGGTACATATA+GGG | - | chr5.4:50368109-50368128 | None:intergenic | 30.0% | |
| TTTGTAGGAATACTATGTGA+AGG | + | chr5.4:50364567-50364586 | MS.gene050077:intron | 30.0% | |
| TTTGTAGTATGGGTACATAT+AGG | - | chr5.4:50368110-50368129 | None:intergenic | 30.0% | |
| ! | AAAATGTGAAGAGGCATAAA+CGG | + | chr5.4:50365876-50365895 | MS.gene050077:intron | 30.0% |
| ! | AGGATTGGATTGGATATAAA+GGG | + | chr5.4:50367576-50367595 | MS.gene050077:intron | 30.0% |
| ! | ATGGATGAGTGCATAATTTT+GGG | - | chr5.4:50364192-50364211 | None:intergenic | 30.0% |
| ! | CTAGAAAAATCCAGGTTTTA+AGG | - | chr5.4:50366910-50366929 | None:intergenic | 30.0% |
| ! | GAATAAATTGTGTTGGTGTT+AGG | + | chr5.4:50367214-50367233 | MS.gene050077:intron | 30.0% |
| ! | GAGAGGAAATTCTTCTTTTA+AGG | + | chr5.4:50365619-50365638 | MS.gene050077:intron | 30.0% |
| ! | TAATAGTATTGGGACCAAAT+TGG | - | chr5.4:50364153-50364172 | None:intergenic | 30.0% |
| ! | TCTCATAGTTCTGTTGTAAA+CGG | + | chr5.4:50367748-50367767 | MS.gene050077:intron | 30.0% |
| !! | AACATAAGGTATTGTTGAGA+GGG | + | chr5.4:50367873-50367892 | MS.gene050077:intron | 30.0% |
| !! | AGGAGGTATTTAAGTAGAAT+TGG | - | chr5.4:50363584-50363603 | None:intergenic | 30.0% |
| !! | AGTCATTTTCCATTCTTCAA+TGG | + | chr5.4:50367841-50367860 | MS.gene050077:intron | 30.0% |
| !! | ATAAATTGTGTTGGTGTTAG+GGG | + | chr5.4:50367216-50367235 | MS.gene050077:intron | 30.0% |
| !! | ATAACCAATCCTTTAAGACA+TGG | + | chr5.4:50367416-50367435 | MS.gene050077:intron | 30.0% |
| !! | ATACACAATGTGAGTATTGA+AGG | - | chr5.4:50367789-50367808 | None:intergenic | 30.0% |
| !! | ATCCAATTCAAGTGTTGATT+TGG | - | chr5.4:50368795-50368814 | None:intergenic | 30.0% |
| !! | CCTTTTGTTTAACTAAGCAT+TGG | + | chr5.4:50368469-50368488 | MS.gene050077:intron | 30.0% |
| !! | CTTAATTTCAGGTTTCTCTT+CGG | - | chr5.4:50364848-50364867 | None:intergenic | 30.0% |
| !! | TAACATAAGGTATTGTTGAG+AGG | + | chr5.4:50367872-50367891 | MS.gene050077:intron | 30.0% |
| !! | TACACAATGTGAGTATTGAA+GGG | - | chr5.4:50367788-50367807 | None:intergenic | 30.0% |
| !! | TCTTCTTTTAAGGGTGTATA+GGG | + | chr5.4:50365629-50365648 | MS.gene050077:intron | 30.0% |
| !! | TTCTTCTTTTAAGGGTGTAT+AGG | + | chr5.4:50365628-50365647 | MS.gene050077:intron | 30.0% |
| !!! | AAAAACGTGCTGCTTTTTTA+TGG | + | chr5.4:50365597-50365616 | MS.gene050077:intron | 30.0% |
| !!! | GTTTTGAGAGTGAATACTTT+TGG | + | chr5.4:50366546-50366565 | MS.gene050077:intron | 30.0% |
| !!! | TTAGGAATGTCATTTTCTCT+CGG | - | chr5.4:50368379-50368398 | None:intergenic | 30.0% |
| !!! | TTGAAGGGCATTTTCTTATA+TGG | + | chr5.4:50367013-50367032 | MS.gene050077:intron | 30.0% |
| !!! | TTTGATATCCTTTTGAAGTG+AGG | + | chr5.4:50367381-50367400 | MS.gene050077:intron | 30.0% |
| AAAACTGAGTGTTAGACATG+AGG | - | chr5.4:50368928-50368947 | None:intergenic | 35.0% | |
| AACAGTTGTTAAGGTTTCGT+TGG | + | chr5.4:50366857-50366876 | MS.gene050077:intron | 35.0% | |
| AACTGAAATCACCTTGATAC+AGG | + | chr5.4:50368729-50368748 | MS.gene050077:intron | 35.0% | |
| AATCTCTATTGTATGGCAAG+TGG | + | chr5.4:50366676-50366695 | MS.gene050077:intron | 35.0% | |
| AATTTCTTTCTCCTGGAGTT+AGG | + | chr5.4:50367535-50367554 | MS.gene050077:intron | 35.0% | |
| ACAGTTGTTAAGGTTTCGTT+GGG | + | chr5.4:50366858-50366877 | MS.gene050077:intron | 35.0% | |
| ACATGACCACTGTTGTTAAA+TGG | + | chr5.4:50365907-50365926 | MS.gene050077:intron | 35.0% | |
| ACTGTTGTCGAAGAAAATTC+TGG | + | chr5.4:50364808-50364827 | MS.gene050077:CDS | 35.0% | |
| AGAAAATTCTGGTGATCAAG+AGG | + | chr5.4:50364819-50364838 | MS.gene050077:CDS | 35.0% | |
| AGAAGAAAGGGAAATAGACT+GGG | + | chr5.4:50367643-50367662 | MS.gene050077:intron | 35.0% | |
| AGAGTATAAGCATGACTGTA+AGG | + | chr5.4:50368603-50368622 | MS.gene050077:intron | 35.0% | |
| AGCATAAAAAACAAGCTCAC+CGG | + | chr5.4:50366951-50366970 | MS.gene050077:intron | 35.0% | |
| AGGGATTCATGTAGACTATT+TGG | + | chr5.4:50368226-50368245 | MS.gene050077:intron | 35.0% | |
| AGGTCAATGTTAACATTGGT+AGG | - | chr5.4:50368908-50368927 | None:intergenic | 35.0% | |
| AGTATAAGCATGACTGTAAG+GGG | + | chr5.4:50368605-50368624 | MS.gene050077:intron | 35.0% | |
| AGTCTCAAGCTGGAAAATAA+TGG | - | chr5.4:50364965-50364984 | None:intergenic | 35.0% | |
| ATAAAACTGGCAATGATCTG+AGG | - | chr5.4:50364496-50364515 | None:intergenic | 35.0% | |
| ATATGCATAGTTGTGAATGG+CGG | - | chr5.4:50366153-50366172 | None:intergenic | 35.0% | |
| ATATGCTAGGATTACCAAAG+GGG | - | chr5.4:50368182-50368201 | None:intergenic | 35.0% | |
| ATGAGAGAAATTAGAGACTC+TGG | - | chr5.4:50367734-50367753 | None:intergenic | 35.0% | |
| CAATGATCTGAGGAAATTGA+GGG | - | chr5.4:50364486-50364505 | None:intergenic | 35.0% | |
| CACAGAACAAAAGAAAAAGG+AGG | + | chr5.4:50367945-50367964 | MS.gene050077:intron | 35.0% | |
| CAGAATATGGAAGAATCCAA+CGG | - | chr5.4:50366126-50366145 | None:intergenic | 35.0% | |
| CAGCACAAGAAATTTGTGAA+GGG | + | chr5.4:50365955-50365974 | MS.gene050077:intron | 35.0% | |
| CATCTGCACATGAATTTCAA+CGG | - | chr5.4:50365145-50365164 | None:intergenic | 35.0% | |
| CATGAGGTCAATGTTAACAT+TGG | - | chr5.4:50368912-50368931 | None:intergenic | 35.0% | |
| CCAAACAGGATCTCAAATTA+GGG | + | chr5.4:50368338-50368357 | MS.gene050077:intron | 35.0% | |
| CCCGATACATTGAATATCAT+CGG | + | chr5.4:50365037-50365056 | MS.gene050077:CDS | 35.0% | |
| CCGATGATATTCAATGTATC+GGG | - | chr5.4:50365040-50365059 | None:intergenic | 35.0% | |
| CGAAGAGAAACCTGAAATTA+AGG | + | chr5.4:50364846-50364865 | MS.gene050077:CDS | 35.0% | |
| CTAAGCTCAGATCTATATCA+TGG | + | chr5.4:50363826-50363845 | MS.gene050077:intron | 35.0% | |
| CTCTGTATTAACTCCATCAA+TGG | - | chr5.4:50367195-50367214 | None:intergenic | 35.0% | |
| CTTCTCTTCTAAATCTGATC+AGG | - | chr5.4:50368534-50368553 | None:intergenic | 35.0% | |
| CTTGTGTCTGTATTTGTATG+AGG | + | chr5.4:50364004-50364023 | MS.gene050077:intron | 35.0% | |
| GAATTGGTATAAATGGTCTG+AGG | + | chr5.4:50366834-50366853 | MS.gene050077:intron | 35.0% | |
| GAGAGAAAATGACATTCCTA+AGG | + | chr5.4:50368378-50368397 | MS.gene050077:intron | 35.0% | |
| GAGTATAAGCATGACTGTAA+GGG | + | chr5.4:50368604-50368623 | MS.gene050077:intron | 35.0% | |
| GGACAAACAAGAGAAAAAAG+AGG | + | chr5.4:50364588-50364607 | MS.gene050077:CDS | 35.0% | |
| GGTTTATGTTGGGAATTACT+TGG | + | chr5.4:50366279-50366298 | MS.gene050077:intron | 35.0% | |
| GTATTAATGGTGATTCAGGT+TGG | - | chr5.4:50366410-50366429 | None:intergenic | 35.0% | |
| GTTGGGAAATGTTTGAATTG+GGG | + | chr5.4:50367348-50367367 | MS.gene050077:intron | 35.0% | |
| TAAATCGCATGAGAAGTTCA+AGG | + | chr5.4:50367253-50367272 | MS.gene050077:intron | 35.0% | |
| TAGAAGAAAGGGAAATAGAC+TGG | + | chr5.4:50367642-50367661 | MS.gene050077:intron | 35.0% | |
| TATGCACTCATCCATCAATT+TGG | + | chr5.4:50364197-50364216 | MS.gene050077:intron | 35.0% | |
| TATGCTAAACAACAGTCCAA+TGG | - | chr5.4:50366937-50366956 | None:intergenic | 35.0% | |
| TATTACCAAATTAGAGGCCA+TGG | + | chr5.4:50366170-50366189 | MS.gene050077:intron | 35.0% | |
| TCACTTGAAGTAACCACTTA+GGG | + | chr5.4:50366721-50366740 | MS.gene050077:intron | 35.0% | |
| TCAGCACAAGAAATTTGTGA+AGG | + | chr5.4:50365954-50365973 | MS.gene050077:intron | 35.0% | |
| TCCAAACAGGATCTCAAATT+AGG | + | chr5.4:50368337-50368356 | MS.gene050077:intron | 35.0% | |
| TCCATAAACTAGATAACCGA+GGG | - | chr5.4:50364224-50364243 | None:intergenic | 35.0% | |
| TCCTATATACCAGCACTAAT+TGG | - | chr5.4:50367293-50367312 | None:intergenic | 35.0% | |
| TGAGCTATTATTTGAGTGTG+GGG | + | chr5.4:50368297-50368316 | MS.gene050077:intron | 35.0% | |
| TGGATATAAAGGGGGTAATA+TGG | + | chr5.4:50367586-50367605 | MS.gene050077:intron | 35.0% | |
| TTAGCAAACTTATCGCATTC+TGG | - | chr5.4:50365193-50365212 | None:intergenic | 35.0% | |
| TTCACTTGAAGTAACCACTT+AGG | + | chr5.4:50366720-50366739 | MS.gene050077:intron | 35.0% | |
| TTCTCCATGTCTTAAAGGAT+TGG | - | chr5.4:50367423-50367442 | None:intergenic | 35.0% | |
| TTGGGGATTGATCATTGAAT+TGG | + | chr5.4:50366818-50366837 | MS.gene050077:intron | 35.0% | |
| TTGTATGGCAAGTGGAATAA+AGG | + | chr5.4:50366684-50366703 | MS.gene050077:intron | 35.0% | |
| TTTATTATCTGCTAGGCACT+AGG | + | chr5.4:50365269-50365288 | MS.gene050077:intron | 35.0% | |
| TTTCTATCTGGACTCTTACA+TGG | + | chr5.4:50365346-50365365 | MS.gene050077:intron | 35.0% | |
| ! | AGAGAAGATTACTGGCTAAT+TGG | + | chr5.4:50368547-50368566 | MS.gene050077:intron | 35.0% |
| ! | CAGGATTGGATTGGATATAA+AGG | + | chr5.4:50367575-50367594 | MS.gene050077:intron | 35.0% |
| ! | GATGGATGAGTGCATAATTT+TGG | - | chr5.4:50364193-50364212 | None:intergenic | 35.0% |
| ! | GATTGGATTGGATATAAAGG+GGG | + | chr5.4:50367578-50367597 | MS.gene050077:intron | 35.0% |
| ! | GGATTGGATTGGATATAAAG+GGG | + | chr5.4:50367577-50367596 | MS.gene050077:intron | 35.0% |
| ! | GTTGCCGTCATTATTCATTT+TGG | + | chr5.4:50364375-50364394 | MS.gene050077:intron | 35.0% |
| ! | TAACTTCTTTGACTTACCGT+TGG | + | chr5.4:50366107-50366126 | MS.gene050077:intron | 35.0% |
| !! | AATGGTGCTACTGTAACATA+AGG | + | chr5.4:50367859-50367878 | MS.gene050077:intron | 35.0% |
| !! | ACATAAGGTATTGTTGAGAG+GGG | + | chr5.4:50367874-50367893 | MS.gene050077:intron | 35.0% |
| !! | ACCAATTAGTGCTGGTATAT+AGG | + | chr5.4:50367289-50367308 | MS.gene050077:intron | 35.0% |
| !! | AGAAATTTTGGAGAAAGGTG+GGG | + | chr5.4:50367439-50367458 | MS.gene050077:intron | 35.0% |
| !! | CATGGAGAAATTTTGGAGAA+AGG | + | chr5.4:50367434-50367453 | MS.gene050077:intron | 35.0% |
| !! | GAGAAATTTTGGAGAAAGGT+GGG | + | chr5.4:50367438-50367457 | MS.gene050077:intron | 35.0% |
| !! | TCAAGTGTTGATTTGGTTGA+AGG | - | chr5.4:50368788-50368807 | None:intergenic | 35.0% |
| !! | TCTTAGATAGTTGATGGTCT+TGG | + | chr5.4:50367080-50367099 | MS.gene050077:intron | 35.0% |
| !! | TGCCTTGTTTGATTAGTAGT+TGG | - | chr5.4:50365009-50365028 | None:intergenic | 35.0% |
| !!! | ATATCCTTTTGAAGTGAGGA+GGG | + | chr5.4:50367385-50367404 | MS.gene050077:intron | 35.0% |
| !!! | TAGGAATGTCATTTTCTCTC+GGG | - | chr5.4:50368378-50368397 | None:intergenic | 35.0% |
| AAATACATACCCATTCGCCA+GGG | - | chr5.4:50365234-50365253 | None:intergenic | 40.0% | |
| AACTCCTATCTGGTCTAATC+AGG | - | chr5.4:50367680-50367699 | None:intergenic | 40.0% | |
| AAGAAAGGGAAATAGACTGG+GGG | + | chr5.4:50367645-50367664 | MS.gene050077:intron | 40.0% | |
| AAGCATGAAGATACAAGGAG+TGG | + | chr5.4:50367501-50367520 | MS.gene050077:intron | 40.0% | |
| ACAAAAGAAAAAGGAGGGAC+AGG | + | chr5.4:50367951-50367970 | MS.gene050077:intron | 40.0% | |
| ACAATAGAAACACGCCGTTA+CGG | - | chr5.4:50366006-50366025 | None:intergenic | 40.0% | |
| ACAGTAGCACCATTGAAGAA+TGG | - | chr5.4:50367853-50367872 | None:intergenic | 40.0% | |
| ACATTCCTAAGGCAGTCTTT+AGG | + | chr5.4:50368389-50368408 | MS.gene050077:intron | 40.0% | |
| ACTCTCAAAACTCTCGACTT+AGG | - | chr5.4:50366537-50366556 | None:intergenic | 40.0% | |
| ACTTAGGATTCCATTGTTGC+AGG | - | chr5.4:50366521-50366540 | None:intergenic | 40.0% | |
| AGCATGAAGATACAAGGAGT+GGG | + | chr5.4:50367502-50367521 | MS.gene050077:intron | 40.0% | |
| AGTGATTCACCCTTAAAACC+TGG | + | chr5.4:50366897-50366916 | MS.gene050077:intron | 40.0% | |
| AGTGGAAACCAAACCATTGA+TGG | + | chr5.4:50367179-50367198 | MS.gene050077:intron | 40.0% | |
| ATAAAAAACAAGCTCACCGG+TGG | + | chr5.4:50366954-50366973 | MS.gene050077:intron | 40.0% | |
| ATGAGAAGTTCAAGGAGAAG+TGG | + | chr5.4:50367261-50367280 | MS.gene050077:intron | 40.0% | |
| ATGTTGCCATATGAGGATGT+TGG | + | chr5.4:50367330-50367349 | MS.gene050077:intron | 40.0% | |
| CAATTGCTAGGATCTACAAC+AGG | - | chr5.4:50366374-50366393 | None:intergenic | 40.0% | |
| CACTAATATTGCAAACTGGG+CGG | - | chr5.4:50366233-50366252 | None:intergenic | 40.0% | |
| CAGTAGTTTCAGGATTGGAT+TGG | + | chr5.4:50367566-50367585 | MS.gene050077:intron | 40.0% | |
| CATATGGCAACATCCTCATA+TGG | - | chr5.4:50367323-50367342 | None:intergenic | 40.0% | |
| CATTTCCCAACATCCTCATA+TGG | - | chr5.4:50367339-50367358 | None:intergenic | 40.0% | |
| CCCAGTTTGCAATATTAGTG+GGG | + | chr5.4:50366233-50366252 | MS.gene050077:intron | 40.0% | |
| CCCCACTAATATTGCAAACT+GGG | - | chr5.4:50366236-50366255 | None:intergenic | 40.0% | |
| CGATCAGAATTTCTTTCTCC+TGG | + | chr5.4:50367528-50367547 | MS.gene050077:intron | 40.0% | |
| CTGTTGCACTTCATGTTGAA+GGG | + | chr5.4:50366998-50367017 | MS.gene050077:intron | 40.0% | |
| CTTCGCTTGAATCTTGCAAA+GGG | - | chr5.4:50367905-50367924 | None:intergenic | 40.0% | |
| GAAAATTCAGGCCTGTATCA+AGG | - | chr5.4:50368743-50368762 | None:intergenic | 40.0% | |
| GAACTTCAAGGTTCATGGTA+TGG | + | chr5.4:50366636-50366655 | MS.gene050077:intron | 40.0% | |
| GAAGAAAGGGAAATAGACTG+GGG | + | chr5.4:50367644-50367663 | MS.gene050077:intron | 40.0% | |
| GAAGCTAATCAAGATCTAGG+AGG | - | chr5.4:50363705-50363724 | None:intergenic | 40.0% | |
| GACTTCAGTAGTTTCAGGAT+TGG | + | chr5.4:50367561-50367580 | MS.gene050077:intron | 40.0% | |
| GATTAGACCAGATAGGAGTT+AGG | + | chr5.4:50367680-50367699 | MS.gene050077:intron | 40.0% | |
| GCAATGATCTGAGGAAATTG+AGG | - | chr5.4:50364487-50364506 | None:intergenic | 40.0% | |
| GCCCAGTTTGCAATATTAGT+GGG | + | chr5.4:50366232-50366251 | MS.gene050077:intron | 40.0% | |
| GGGGGTTAATCTCTATTGTA+TGG | + | chr5.4:50366669-50366688 | MS.gene050077:intron | 40.0% | |
| GGTGAGAGAGTGATAGTTTA+GGG | + | chr5.4:50364313-50364332 | MS.gene050077:intron | 40.0% | |
| GTATAAGCATGACTGTAAGG+GGG | + | chr5.4:50368606-50368625 | MS.gene050077:intron | 40.0% | |
| GTCAATCTCGATGAACTTCA+AGG | + | chr5.4:50366624-50366643 | MS.gene050077:intron | 40.0% | |
| GTCATGCAATCTCATTGAAC+TGG | + | chr5.4:50368062-50368081 | MS.gene050077:intron | 40.0% | |
| GTCCATAAACTAGATAACCG+AGG | - | chr5.4:50364225-50364244 | None:intergenic | 40.0% | |
| GTTGGAAAACGGAAATCTAC+TGG | - | chr5.4:50364991-50365010 | None:intergenic | 40.0% | |
| TATAAGCATGACTGTAAGGG+GGG | + | chr5.4:50368607-50368626 | MS.gene050077:intron | 40.0% | |
| TATGAGGATGTTGCCATATG+AGG | + | chr5.4:50367323-50367342 | MS.gene050077:intron | 40.0% | |
| TCCCCACTAATATTGCAAAC+TGG | - | chr5.4:50366237-50366256 | None:intergenic | 40.0% | |
| TCGATGAACTTCAAGGTTCA+TGG | + | chr5.4:50366631-50366650 | MS.gene050077:intron | 40.0% | |
| TCTGTTGCACTTCATGTTGA+AGG | + | chr5.4:50366997-50367016 | MS.gene050077:intron | 40.0% | |
| TGACTCTCTTGTCTTGCATT+GGG | + | chr5.4:50366800-50366819 | MS.gene050077:intron | 40.0% | |
| TGAGAAGTTCAAGGAGAAGT+GGG | + | chr5.4:50367262-50367281 | MS.gene050077:intron | 40.0% | |
| TGGTGAGAGAGTGATAGTTT+AGG | + | chr5.4:50364312-50364331 | MS.gene050077:intron | 40.0% | |
| TGTTGAAGAAAACGCTCTAG+AGG | + | chr5.4:50364774-50364793 | MS.gene050077:CDS | 40.0% | |
| TGTTGCCATATGAGGATGTT+GGG | + | chr5.4:50367331-50367350 | MS.gene050077:intron | 40.0% | |
| TTGAAGTAACCACTTAGGGA+GGG | + | chr5.4:50366725-50366744 | MS.gene050077:intron | 40.0% | |
| TTGACTCTCTTGTCTTGCAT+TGG | + | chr5.4:50366799-50366818 | MS.gene050077:intron | 40.0% | |
| ! | AAGAAAAGATGTTCGGTGGA+GGG | + | chr5.4:50368207-50368226 | MS.gene050077:intron | 40.0% |
| ! | ACCCTCGGTTATCTAGTTTA+TGG | + | chr5.4:50364220-50364239 | MS.gene050077:intron | 40.0% |
| ! | ACCTTCCTTTTCCTCTATTG+TGG | - | chr5.4:50366088-50366107 | None:intergenic | 40.0% |
| ! | ATGGCACTCTAGAAAAATCC+AGG | - | chr5.4:50366918-50366937 | None:intergenic | 40.0% |
| ! | CCCTAATTTGAGATCCTGTT+TGG | - | chr5.4:50368341-50368360 | None:intergenic | 40.0% |
| ! | CGTGTTTCTATTGTGGAGTT+TGG | + | chr5.4:50366012-50366031 | MS.gene050077:intron | 40.0% |
| ! | TAAGAAAAGATGTTCGGTGG+AGG | + | chr5.4:50368206-50368225 | MS.gene050077:intron | 40.0% |
| !! | CAGGAATCATTTGCTGTGTA+GGG | - | chr5.4:50368252-50368271 | None:intergenic | 40.0% |
| !! | GGAGAAATTTTGGAGAAAGG+TGG | + | chr5.4:50367437-50367456 | MS.gene050077:intron | 40.0% |
| !! | TCAGGAATCATTTGCTGTGT+AGG | - | chr5.4:50368253-50368272 | None:intergenic | 40.0% |
| !! | TGGAGTTTGGTGAGATTTTG+AGG | + | chr5.4:50366025-50366044 | MS.gene050077:intron | 40.0% |
| !! | TGTGTGTAGGTGTCATTAGA+AGG | + | chr5.4:50366258-50366277 | MS.gene050077:intron | 40.0% |
| !!! | AGGTTTTAAGGGTGAATCAC+TGG | - | chr5.4:50366898-50366917 | None:intergenic | 40.0% |
| !!! | GATATCCTTTTGAAGTGAGG+AGG | + | chr5.4:50367384-50367403 | MS.gene050077:intron | 40.0% |
| !!! | GGATTTTTCTAGAGTGCCAT+TGG | + | chr5.4:50366918-50366937 | MS.gene050077:intron | 40.0% |
| AAATAGACTGGGGGTTGACA+AGG | + | chr5.4:50367654-50367673 | MS.gene050077:intron | 45.0% | |
| AAATGGCCACGTGATTCAAG+AGG | - | chr5.4:50368679-50368698 | None:intergenic | 45.0% | |
| AAGGACTATTGGGAGAGACT+GGG | + | chr5.4:50368652-50368671 | MS.gene050077:intron | 45.0% | |
| AAGGCCTGATTAGACCAGAT+AGG | + | chr5.4:50367673-50367692 | MS.gene050077:intron | 45.0% | |
| AATGGCCACGTGATTCAAGA+GGG | - | chr5.4:50368678-50368697 | None:intergenic | 45.0% | |
| ACTCTTGTGGCTTAACCACT+TGG | + | chr5.4:50365801-50365820 | MS.gene050077:intron | 45.0% | |
| ACTGATCAGATCTTGGAGAC+AGG | + | chr5.4:50366194-50366213 | MS.gene050077:intron | 45.0% | |
| AGAGATTCACCATGAGAGAG+GGG | + | chr5.4:50367147-50367166 | MS.gene050077:intron | 45.0% | |
| ATAACGACCATTCGAGCTCT+GGG | - | chr5.4:50366497-50366516 | None:intergenic | 45.0% | |
| ATGACCCAAATCGCATTAGG+TGG | - | chr5.4:50368047-50368066 | None:intergenic | 45.0% | |
| ATGGCAACATCCTCATATGG+TGG | - | chr5.4:50367320-50367339 | None:intergenic | 45.0% | |
| CAAGGTTCATGGTATGGACA+AGG | + | chr5.4:50366642-50366661 | MS.gene050077:intron | 45.0% | |
| CAAGTCCTAAAGACTGCCTT+AGG | - | chr5.4:50368397-50368416 | None:intergenic | 45.0% | |
| CAGAGATTCACCATGAGAGA+GGG | + | chr5.4:50367146-50367165 | MS.gene050077:intron | 45.0% | |
| CAGTTCCATGGCCTCTAATT+TGG | - | chr5.4:50366178-50366197 | None:intergenic | 45.0% | |
| CATCCATCAATTTGGACCCT+CGG | + | chr5.4:50364205-50364224 | MS.gene050077:intron | 45.0% | |
| CCAAGATCTGATCAGTTCCA+TGG | - | chr5.4:50366190-50366209 | None:intergenic | 45.0% | |
| CCATGGAACTGATCAGATCT+TGG | + | chr5.4:50366187-50366206 | MS.gene050077:intron | 45.0% | |
| CCTACCACCTAATGCGATTT+GGG | + | chr5.4:50368040-50368059 | MS.gene050077:intron | 45.0% | |
| CCTTCGCTTGAATCTTGCAA+AGG | - | chr5.4:50367906-50367925 | None:intergenic | 45.0% | |
| CCTTTGCAAGATTCAAGCGA+AGG | + | chr5.4:50367903-50367922 | MS.gene050077:intron | 45.0% | |
| CGAGGAAGTTGAAAAGCCAA+AGG | + | chr5.4:50364651-50364670 | MS.gene050077:CDS | 45.0% | |
| CGCCCAGTTTGCAATATTAG+TGG | + | chr5.4:50366231-50366250 | MS.gene050077:intron | 45.0% | |
| CTGTTGTTAAATGGCTGCCA+TGG | + | chr5.4:50365916-50365935 | MS.gene050077:intron | 45.0% | |
| CTTCATGCCTTCAACTCTTG+TGG | + | chr5.4:50365788-50365807 | MS.gene050077:intron | 45.0% | |
| CTTGAAGTAACCACTTAGGG+AGG | + | chr5.4:50366724-50366743 | MS.gene050077:intron | 45.0% | |
| GAAATACATACCCATTCGCC+AGG | - | chr5.4:50365235-50365254 | None:intergenic | 45.0% | |
| GAATCTCTGATCTACGTCTC+TGG | - | chr5.4:50367135-50367154 | None:intergenic | 45.0% | |
| GACTCTCTTGTCTTGCATTG+GGG | + | chr5.4:50366801-50366820 | MS.gene050077:intron | 45.0% | |
| GAGAAGTTCAAGGAGAAGTG+GGG | + | chr5.4:50367263-50367282 | MS.gene050077:intron | 45.0% | |
| GATTGTCAGCTATTCTGCCA+TGG | - | chr5.4:50365936-50365955 | None:intergenic | 45.0% | |
| GCCACAATAGAGGAAAAGGA+AGG | + | chr5.4:50366084-50366103 | MS.gene050077:intron | 45.0% | |
| GGAAGGACTTCAGTAGTTTC+AGG | + | chr5.4:50367556-50367575 | MS.gene050077:intron | 45.0% | |
| GGAAGTTGAAAAGCCAAAGG+AGG | + | chr5.4:50364654-50364673 | MS.gene050077:CDS | 45.0% | |
| GGGAATTACTTGGGACTGTT+TGG | + | chr5.4:50366289-50366308 | MS.gene050077:intron | 45.0% | |
| GGTCTGAGGAACAGTTGTTA+AGG | + | chr5.4:50366848-50366867 | MS.gene050077:intron | 45.0% | |
| GGTTAAGCCACAAGAGTTGA+AGG | - | chr5.4:50365798-50365817 | None:intergenic | 45.0% | |
| GTTGTTAAGGTTTCGTTGGG+AGG | + | chr5.4:50366861-50366880 | MS.gene050077:intron | 45.0% | |
| TAACCGAGGGTCCAAATTGA+TGG | - | chr5.4:50364211-50364230 | None:intergenic | 45.0% | |
| TAAGGACTATTGGGAGAGAC+TGG | + | chr5.4:50368651-50368670 | MS.gene050077:intron | 45.0% | |
| TAGGGCTATGGTAGGGAATA+AGG | + | chr5.4:50367464-50367483 | MS.gene050077:intron | 45.0% | |
| TAGTCCCTCCTCACTTCAAA+AGG | - | chr5.4:50367392-50367411 | None:intergenic | 45.0% | |
| TATTATCGTGCTCTTTGCCC+TGG | + | chr5.4:50365214-50365233 | MS.gene050077:CDS | 45.0% | |
| TCAGAGATTCACCATGAGAG+AGG | + | chr5.4:50367145-50367164 | MS.gene050077:intron | 45.0% | |
| TCATGGTATGGACAAGGAGA+GGG | + | chr5.4:50366648-50366667 | MS.gene050077:intron | 45.0% | |
| TCTAAATCTGATCAGGCGAC+AGG | - | chr5.4:50368527-50368546 | None:intergenic | 45.0% | |
| TCTGGACTCTTACATGGCAA+TGG | + | chr5.4:50365352-50365371 | MS.gene050077:intron | 45.0% | |
| TCTTTCTCCTGGAGTTAGGA+AGG | + | chr5.4:50367539-50367558 | MS.gene050077:intron | 45.0% | |
| TGCATGACCCAAATCGCATT+AGG | - | chr5.4:50368050-50368069 | None:intergenic | 45.0% | |
| TGCTTTCTTCAGCAACCACA+GGG | - | chr5.4:50364735-50364754 | None:intergenic | 45.0% | |
| TGGAATGAGCAACGTGAGAA+TGG | + | chr5.4:50368979-50368998 | MS.gene050077:CDS | 45.0% | |
| TGGCAAGTGGAATAAAGGAG+TGG | + | chr5.4:50366689-50366708 | MS.gene050077:intron | 45.0% | |
| TGGCAGCCATTTAACAACAG+TGG | - | chr5.4:50365916-50365935 | None:intergenic | 45.0% | |
| TTCATGGTATGGACAAGGAG+AGG | + | chr5.4:50366647-50366666 | MS.gene050077:intron | 45.0% | |
| TTCTCAACAACAGCTTCCAC+AGG | - | chr5.4:50364685-50364704 | None:intergenic | 45.0% | |
| TTTCGTTGGGAGGAGTTCAA+TGG | + | chr5.4:50366871-50366890 | MS.gene050077:intron | 45.0% | |
| ! | CGTTTTCTTCAACAGCAGGA+GGG | - | chr5.4:50364768-50364787 | None:intergenic | 45.0% |
| ! | GTAACGGCGTGTTTCTATTG+TGG | + | chr5.4:50366005-50366024 | MS.gene050077:intron | 45.0% |
| ! | GTTTTCTTCAACAGCAGGAG+GGG | - | chr5.4:50364767-50364786 | None:intergenic | 45.0% |
| ! | TATTAGTGGGGAGTGTGTGT+AGG | + | chr5.4:50366245-50366264 | MS.gene050077:intron | 45.0% |
| ! | TGGGACTGTTTGGTGAGAAT+GGG | + | chr5.4:50366299-50366318 | MS.gene050077:intron | 45.0% |
| ! | TTGGGACTGTTTGGTGAGAA+TGG | + | chr5.4:50366298-50366317 | MS.gene050077:intron | 45.0% |
| !! | ACAGGTTTTTCGACAGCAAC+TGG | - | chr5.4:50364625-50364644 | None:intergenic | 45.0% |
| !! | AGAGCGTTTTCTTCAACAGC+AGG | - | chr5.4:50364772-50364791 | None:intergenic | 45.0% |
| !! | CATTGATTTGACCGTGCATC+AGG | + | chr5.4:50368948-50368967 | MS.gene050077:intron | 45.0% |
| !! | GCAGTCTTTAGGACTTGTGA+AGG | + | chr5.4:50368400-50368419 | MS.gene050077:intron | 45.0% |
| !! | GGTGATTCAGGTTGGTATCA+AGG | - | chr5.4:50366402-50366421 | None:intergenic | 45.0% |
| !!! | CGTGCTGCTTTTTTATGGAG+AGG | + | chr5.4:50365602-50365621 | MS.gene050077:intron | 45.0% |
| !! | TCTTATATTATTAATATTAT+CGG | + | chr5.4:50363959-50363978 | MS.gene050077:intron | 5.0% |
| AAAAACAAGCTCACCGGTGG+AGG | + | chr5.4:50366957-50366976 | MS.gene050077:intron | 50.0% | |
| AAACACGCCGTTACGGCTTA+TGG | - | chr5.4:50365999-50366018 | None:intergenic | 50.0% | |
| ACTGCTGCCTAACTCCTATC+TGG | - | chr5.4:50367690-50367709 | None:intergenic | 50.0% | |
| AGCGAGAGTTTGAGAGCTGT+TGG | - | chr5.4:50363525-50363544 | None:intergenic | 50.0% | |
| ATAGGATGCGCCACCATATG+AGG | + | chr5.4:50367307-50367326 | MS.gene050077:intron | 50.0% | |
| ATCCCTCTATACTCCTCCAC+CGG | - | chr5.4:50366973-50366992 | None:intergenic | 50.0% | |
| ATGAACAGTCCCTCCCTAAG+TGG | - | chr5.4:50366737-50366756 | None:intergenic | 50.0% | |
| ATGGTATGGACAAGGAGAGG+GGG | + | chr5.4:50366650-50366669 | MS.gene050077:intron | 50.0% | |
| CAGCAGTTGAGCTGTTCTTG+AGG | + | chr5.4:50367703-50367722 | MS.gene050077:intron | 50.0% | |
| CATAACGACCATTCGAGCTC+TGG | - | chr5.4:50366498-50366517 | None:intergenic | 50.0% | |
| CATGGTATGGACAAGGAGAG+GGG | + | chr5.4:50366649-50366668 | MS.gene050077:intron | 50.0% | |
| CCATCTGTCAACCTGATGCA+CGG | - | chr5.4:50368962-50368981 | None:intergenic | 50.0% | |
| CCCAAATCGCATTAGGTGGT+AGG | - | chr5.4:50368043-50368062 | None:intergenic | 50.0% | |
| CGAAAAACCTGTTGCAGTCG+AGG | + | chr5.4:50364633-50364652 | MS.gene050077:CDS | 50.0% | |
| CGTGAGAATGGAACATTCCC+AGG | + | chr5.4:50368991-50369010 | MS.gene050077:CDS | 50.0% | |
| CTACCACTCTCTCGCCAATT+TGG | + | chr5.4:50364136-50364155 | MS.gene050077:intron | 50.0% | |
| CTCGGCCACAATAGAGGAAA+AGG | + | chr5.4:50366080-50366099 | MS.gene050077:intron | 50.0% | |
| CTGAAGTCCTTCCTAACTCC+AGG | - | chr5.4:50367549-50367568 | None:intergenic | 50.0% | |
| CTGCTTTCTTCAGCAACCAC+AGG | - | chr5.4:50364736-50364755 | None:intergenic | 50.0% | |
| GCATTAGGTGGTAGGCCATT+TGG | - | chr5.4:50368035-50368054 | None:intergenic | 50.0% | |
| GCCTACCACCTAATGCGATT+TGG | + | chr5.4:50368039-50368058 | MS.gene050077:intron | 50.0% | |
| GCGAGAGTTTGAGAGCTGTT+GGG | - | chr5.4:50363524-50363543 | None:intergenic | 50.0% | |
| GCTTTCTTCAGCAACCACAG+GGG | - | chr5.4:50364734-50364753 | None:intergenic | 50.0% | |
| GGTCGTTATGCCTGCAACAA+TGG | + | chr5.4:50366508-50366527 | MS.gene050077:intron | 50.0% | |
| GTAAGGGGGGAGACAAGTTA+GGG | + | chr5.4:50368620-50368639 | MS.gene050077:intron | 50.0% | |
| TAACGACCATTCGAGCTCTG+GGG | - | chr5.4:50366496-50366515 | None:intergenic | 50.0% | |
| TCAACTTCCTCGACTGCAAC+AGG | - | chr5.4:50364643-50364662 | None:intergenic | 50.0% | |
| TGCAGATGCGTAGCTGCAAA+GGG | + | chr5.4:50365157-50365176 | MS.gene050077:intron | 50.0% | |
| TGGCGAGAGAGTGGTAGTTT+AGG | - | chr5.4:50364133-50364152 | None:intergenic | 50.0% | |
| TGGGGCTTACCAATTAGTGC+TGG | + | chr5.4:50367281-50367300 | MS.gene050077:intron | 50.0% | |
| TGTAAGGGGGGAGACAAGTT+AGG | + | chr5.4:50368619-50368638 | MS.gene050077:intron | 50.0% | |
| TGTTAGGGGATTGACGCAGA+TGG | + | chr5.4:50367230-50367249 | MS.gene050077:intron | 50.0% | |
| TTAGGGAGGGACTGTTCATG+TGG | + | chr5.4:50366738-50366757 | MS.gene050077:intron | 50.0% | |
| TTGGAGAAAGGTGGGGTCTA+GGG | + | chr5.4:50367446-50367465 | MS.gene050077:intron | 50.0% | |
| TTGTGAAGGGATACCTGCCA+TGG | + | chr5.4:50365968-50365987 | MS.gene050077:intron | 50.0% | |
| TTTCTCTCGGGCGAATCTGA+TGG | - | chr5.4:50368366-50368385 | None:intergenic | 50.0% | |
| TTTGGAGAAAGGTGGGGTCT+AGG | + | chr5.4:50367445-50367464 | MS.gene050077:intron | 50.0% | |
| ! | GCATAGTTGTGAATGGCGGA+TGG | - | chr5.4:50366149-50366168 | None:intergenic | 50.0% |
| ! | GCGTTTTCTTCAACAGCAGG+AGG | - | chr5.4:50364769-50364788 | None:intergenic | 50.0% |
| ! | TTACCAAAGGGGCTAGTGCT+AGG | - | chr5.4:50368171-50368190 | None:intergenic | 50.0% |
| !! | GAATGGCGGATGGCAGAATA+TGG | - | chr5.4:50366139-50366158 | None:intergenic | 50.0% |
| AGAGAGGGGCAGAGATTCAG+TGG | + | chr5.4:50367161-50367180 | MS.gene050077:intron | 55.0% | |
| CAGCTCTCAAACTCTCGCTG+AGG | + | chr5.4:50363526-50363545 | MS.gene050077:CDS | 55.0% | |
| CTACTGGAGCAGTCTCAAGC+TGG | - | chr5.4:50364975-50364994 | None:intergenic | 55.0% | |
| CTCTATCCCCAGAGCTCGAA+TGG | + | chr5.4:50366487-50366506 | MS.gene050077:intron | 55.0% | |
| GAATCTCTGCCCCTCTCTCA+TGG | - | chr5.4:50367159-50367178 | None:intergenic | 55.0% | |
| GGACCAAATTGGCGAGAGAG+TGG | - | chr5.4:50364142-50364161 | None:intergenic | 55.0% | |
| GTGCAGATGCGTAGCTGCAA+AGG | + | chr5.4:50365156-50365175 | MS.gene050077:intron | 55.0% | |
| TCCACAGGAGTAGCCTCCTT+TGG | - | chr5.4:50364670-50364689 | None:intergenic | 55.0% | |
| TGCTCTTTGCCCTGGCGAAT+GGG | + | chr5.4:50365222-50365241 | MS.gene050077:CDS | 55.0% | |
| TGGTATGGACAAGGAGAGGG+GGG | + | chr5.4:50366651-50366670 | MS.gene050077:intron | 55.0% | |
| TTCTTCAACAGCAGGAGGGG+TGG | - | chr5.4:50364764-50364783 | None:intergenic | 55.0% | |
| ! | AAAGGTGGGGTCTAGGGCTA+TGG | + | chr5.4:50367452-50367471 | MS.gene050077:intron | 55.0% |
| ! | AAGTGGCTCGGCCACAATAG+AGG | + | chr5.4:50366074-50366093 | MS.gene050077:intron | 55.0% |
| ! | CACCGGTGGAGGAGTATAGA+GGG | + | chr5.4:50366968-50366987 | MS.gene050077:intron | 55.0% |
| ! | TCACCGGTGGAGGAGTATAG+AGG | + | chr5.4:50366967-50366986 | MS.gene050077:intron | 55.0% |
| ! | TGGGGTCTAGGGCTATGGTA+GGG | + | chr5.4:50367457-50367476 | MS.gene050077:intron | 55.0% |
| !! | CCGTGCATCAGGTTGACAGA+TGG | + | chr5.4:50368959-50368978 | MS.gene050077:intron | 55.0% |
| ACCAATTCCTGCTGCCCCTG+TGG | + | chr5.4:50364717-50364736 | MS.gene050077:CDS | 60.0% | |
| ACCACAGGGGCAGCAGGAAT+TGG | - | chr5.4:50364721-50364740 | None:intergenic | 60.0% | |
| CTGCCTAGCACTAGCCCCTT+TGG | + | chr5.4:50368165-50368184 | MS.gene050077:intron | 60.0% | |
| CTGGGCCCTCTTGAATCACG+TGG | + | chr5.4:50368670-50368689 | MS.gene050077:intron | 60.0% | |
| GCCAAAGGAGGCTACTCCTG+TGG | + | chr5.4:50364666-50364685 | MS.gene050077:CDS | 60.0% | |
| GCGCGCAGAACTGAAGTTGC+AGG | + | chr5.4:50367051-50367070 | MS.gene050077:intron | 60.0% | |
| GGCGCTGCCATAAGCCGTAA+CGG | + | chr5.4:50365989-50366008 | MS.gene050077:intron | 60.0% | |
| GTGCTCTTTGCCCTGGCGAA+TGG | + | chr5.4:50365221-50365240 | MS.gene050077:CDS | 60.0% | |
| TACGGCTTATGGCAGCGCCA+TGG | - | chr5.4:50365988-50366007 | None:intergenic | 60.0% | |
| ! | GTGGGGTCTAGGGCTATGGT+AGG | + | chr5.4:50367456-50367475 | MS.gene050077:intron | 60.0% |
| GCTTATGGCAGCGCCATGGC+AGG | - | chr5.4:50365984-50366003 | None:intergenic | 65.0% | |
| TCAGCAACCACAGGGGCAGC+AGG | - | chr5.4:50364727-50364746 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 50363509 | 50369023 | 50363509 | ID=MS.gene050077 |
| chr5.4 | mRNA | 50363509 | 50369023 | 50363509 | ID=MS.gene050077.t1;Parent=MS.gene050077 |
| chr5.4 | exon | 50363509 | 50363547 | 50363509 | ID=MS.gene050077.t1.exon1;Parent=MS.gene050077.t1 |
| chr5.4 | CDS | 50363509 | 50363547 | 50363509 | ID=cds.MS.gene050077.t1;Parent=MS.gene050077.t1 |
| chr5.4 | exon | 50364574 | 50364867 | 50364574 | ID=MS.gene050077.t1.exon2;Parent=MS.gene050077.t1 |
| chr5.4 | CDS | 50364574 | 50364867 | 50364574 | ID=cds.MS.gene050077.t1;Parent=MS.gene050077.t1 |
| chr5.4 | exon | 50364976 | 50365058 | 50364976 | ID=MS.gene050077.t1.exon3;Parent=MS.gene050077.t1 |
| chr5.4 | CDS | 50364976 | 50365058 | 50364976 | ID=cds.MS.gene050077.t1;Parent=MS.gene050077.t1 |
| chr5.4 | exon | 50365162 | 50365243 | 50365162 | ID=MS.gene050077.t1.exon4;Parent=MS.gene050077.t1 |
| chr5.4 | CDS | 50365162 | 50365243 | 50365162 | ID=cds.MS.gene050077.t1;Parent=MS.gene050077.t1 |
| chr5.4 | exon | 50368970 | 50369023 | 50368970 | ID=MS.gene050077.t1.exon5;Parent=MS.gene050077.t1 |
| chr5.4 | CDS | 50368970 | 50369023 | 50368970 | ID=cds.MS.gene050077.t1;Parent=MS.gene050077.t1 |
| Gene Sequence |
| Protein sequence |
