Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050282.t1 | XP_013450122.1 | 96.5 | 257 | 7 | 2 | 1 | 255 | 1 | 257 | 9.30E-140 | 506.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050282.t1 | Q9FMR3 | 46.0 | 248 | 118 | 3 | 2 | 249 | 3 | 234 | 2.2e-57 | 223.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050282.t1 | A0A072UEA7 | 96.5 | 257 | 7 | 2 | 1 | 255 | 1 | 257 | 6.7e-140 | 506.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene050282.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050282 | MS.gene050283 | 0.977934 | 8.79E-145 | -1.69E-46 |
MS.gene050282 | MS.gene050285 | 0.917929 | 2.92E-86 | -1.69E-46 |
MS.gene050282 | MS.gene050286 | 0.941987 | 1.59E-101 | -1.69E-46 |
MS.gene050282 | MS.gene051751 | 0.97476 | 1.00E-138 | -1.69E-46 |
MS.gene050282 | MS.gene24711 | 0.966316 | 9.29E-126 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050282.t1 | MTR_7g105170 | 96.498 | 257 | 7 | 2 | 1 | 255 | 1 | 257 | 0.0 | 516 |
MS.gene050282.t1 | MTR_2g086690 | 48.846 | 260 | 112 | 7 | 1 | 250 | 1 | 249 | 3.92e-80 | 241 |
MS.gene050282.t1 | MTR_4g052620 | 61.017 | 177 | 66 | 2 | 2 | 178 | 3 | 176 | 9.92e-75 | 228 |
MS.gene050282.t1 | MTR_4g075980 | 44.186 | 172 | 76 | 6 | 6 | 174 | 17 | 171 | 2.04e-42 | 146 |
MS.gene050282.t1 | MTR_5g041940 | 39.645 | 169 | 94 | 4 | 4 | 172 | 3 | 163 | 8.57e-38 | 133 |
MS.gene050282.t1 | MTR_4g134460 | 42.683 | 164 | 81 | 5 | 2 | 165 | 52 | 202 | 1.54e-37 | 137 |
MS.gene050282.t1 | MTR_2g093810 | 42.262 | 168 | 87 | 5 | 4 | 169 | 14 | 173 | 2.46e-36 | 131 |
MS.gene050282.t1 | MTR_4g081870 | 39.766 | 171 | 95 | 4 | 4 | 174 | 9 | 171 | 3.84e-36 | 129 |
MS.gene050282.t1 | MTR_6g011860 | 37.791 | 172 | 97 | 5 | 1 | 168 | 12 | 177 | 1.29e-35 | 130 |
MS.gene050282.t1 | MTR_8g094580 | 33.778 | 225 | 127 | 9 | 4 | 221 | 7 | 216 | 5.90e-35 | 127 |
MS.gene050282.t1 | MTR_6g477900 | 42.593 | 162 | 83 | 6 | 4 | 165 | 6 | 157 | 8.36e-35 | 125 |
MS.gene050282.t1 | MTR_8g467490 | 31.048 | 248 | 152 | 10 | 4 | 239 | 14 | 254 | 2.43e-34 | 127 |
MS.gene050282.t1 | MTR_3g064580 | 36.453 | 203 | 109 | 8 | 4 | 204 | 6 | 190 | 7.64e-34 | 129 |
MS.gene050282.t1 | MTR_8g059170 | 39.264 | 163 | 89 | 6 | 3 | 165 | 13 | 165 | 1.18e-33 | 124 |
MS.gene050282.t1 | MTR_5g014300 | 42.690 | 171 | 78 | 7 | 3 | 166 | 5 | 162 | 1.65e-33 | 124 |
MS.gene050282.t1 | MTR_5g076850 | 40.964 | 166 | 86 | 6 | 4 | 168 | 6 | 160 | 2.04e-33 | 127 |
MS.gene050282.t1 | MTR_2g079990 | 37.569 | 181 | 93 | 8 | 4 | 182 | 16 | 178 | 2.47e-33 | 124 |
MS.gene050282.t1 | MTR_5g040420 | 32.864 | 213 | 129 | 7 | 6 | 210 | 16 | 222 | 5.26e-33 | 124 |
MS.gene050282.t1 | MTR_7g100990 | 39.286 | 168 | 94 | 4 | 4 | 170 | 11 | 171 | 9.89e-33 | 122 |
MS.gene050282.t1 | MTR_4g036030 | 33.929 | 224 | 119 | 8 | 3 | 224 | 6 | 202 | 1.10e-32 | 122 |
MS.gene050282.t1 | MTR_2g064090 | 40.244 | 164 | 87 | 6 | 3 | 165 | 5 | 158 | 1.55e-32 | 122 |
MS.gene050282.t1 | MTR_3g096920 | 35.227 | 176 | 102 | 5 | 4 | 178 | 7 | 171 | 2.88e-32 | 120 |
MS.gene050282.t1 | MTR_6g012670 | 39.053 | 169 | 93 | 5 | 4 | 172 | 20 | 178 | 2.94e-32 | 120 |
MS.gene050282.t1 | MTR_2157s0010 | 33.921 | 227 | 135 | 5 | 4 | 221 | 8 | 228 | 5.27e-32 | 118 |
MS.gene050282.t1 | MTR_7g085220 | 38.728 | 173 | 91 | 5 | 3 | 167 | 7 | 172 | 6.51e-32 | 120 |
MS.gene050282.t1 | MTR_1g008740 | 37.427 | 171 | 95 | 5 | 2 | 171 | 11 | 170 | 7.99e-32 | 120 |
MS.gene050282.t1 | MTR_1g008740 | 37.427 | 171 | 95 | 5 | 2 | 171 | 25 | 184 | 8.33e-32 | 120 |
MS.gene050282.t1 | MTR_5g012080 | 27.609 | 297 | 160 | 11 | 3 | 253 | 6 | 293 | 4.71e-31 | 118 |
MS.gene050282.t1 | MTR_2g086880 | 33.203 | 256 | 131 | 8 | 3 | 248 | 17 | 242 | 4.97e-31 | 120 |
MS.gene050282.t1 | MTR_3g109340 | 39.394 | 165 | 87 | 6 | 2 | 165 | 20 | 172 | 5.09e-31 | 118 |
MS.gene050282.t1 | MTR_2g086880 | 33.203 | 256 | 131 | 8 | 3 | 248 | 17 | 242 | 6.47e-31 | 120 |
MS.gene050282.t1 | MTR_3g109340 | 39.394 | 165 | 86 | 6 | 2 | 165 | 20 | 171 | 8.85e-31 | 117 |
MS.gene050282.t1 | MTR_4g098630 | 40.361 | 166 | 86 | 6 | 4 | 166 | 6 | 161 | 1.17e-30 | 116 |
MS.gene050282.t1 | MTR_4g089135 | 35.912 | 181 | 91 | 5 | 4 | 165 | 15 | 189 | 2.03e-30 | 116 |
MS.gene050282.t1 | MTR_1g097300 | 42.236 | 161 | 81 | 6 | 6 | 165 | 21 | 170 | 5.92e-30 | 117 |
MS.gene050282.t1 | MTR_2g080010 | 33.195 | 241 | 111 | 8 | 3 | 236 | 14 | 211 | 7.96e-30 | 114 |
MS.gene050282.t1 | MTR_1g096430 | 38.509 | 161 | 88 | 4 | 4 | 164 | 7 | 156 | 8.74e-30 | 114 |
MS.gene050282.t1 | MTR_3g070030 | 39.053 | 169 | 94 | 5 | 4 | 172 | 19 | 178 | 8.81e-30 | 114 |
MS.gene050282.t1 | MTR_3g088110 | 36.970 | 165 | 94 | 6 | 4 | 168 | 7 | 161 | 1.31e-29 | 112 |
MS.gene050282.t1 | MTR_2g079990 | 31.707 | 205 | 102 | 7 | 3 | 182 | 15 | 206 | 1.34e-29 | 114 |
MS.gene050282.t1 | MTR_6g084430 | 39.024 | 164 | 86 | 6 | 2 | 165 | 3 | 152 | 1.52e-29 | 113 |
MS.gene050282.t1 | MTR_3g093050 | 38.095 | 168 | 88 | 6 | 1 | 165 | 19 | 173 | 1.64e-29 | 116 |
MS.gene050282.t1 | MTR_3g093040 | 37.349 | 166 | 88 | 6 | 3 | 165 | 107 | 259 | 1.77e-29 | 113 |
MS.gene050282.t1 | MTR_3g093050 | 38.095 | 168 | 88 | 6 | 1 | 165 | 19 | 173 | 1.84e-29 | 116 |
MS.gene050282.t1 | MTR_4g108760 | 37.423 | 163 | 92 | 5 | 3 | 165 | 16 | 168 | 2.91e-29 | 113 |
MS.gene050282.t1 | MTR_3g096140 | 33.014 | 209 | 122 | 6 | 4 | 212 | 7 | 197 | 4.06e-29 | 111 |
MS.gene050282.t1 | MTR_3g435150 | 38.889 | 162 | 89 | 4 | 4 | 165 | 16 | 167 | 6.30e-29 | 111 |
MS.gene050282.t1 | MTR_1g069805 | 35.976 | 164 | 89 | 6 | 4 | 166 | 10 | 158 | 8.37e-29 | 110 |
MS.gene050282.t1 | MTR_8g024480 | 35.263 | 190 | 105 | 6 | 4 | 184 | 15 | 195 | 9.48e-29 | 113 |
MS.gene050282.t1 | MTR_3g096920 | 37.589 | 141 | 80 | 3 | 4 | 144 | 7 | 139 | 1.09e-28 | 111 |
MS.gene050282.t1 | MTR_4g101680 | 35.802 | 162 | 93 | 4 | 3 | 164 | 6 | 156 | 1.27e-28 | 111 |
MS.gene050282.t1 | MTR_5g021710 | 36.310 | 168 | 92 | 5 | 1 | 164 | 1 | 157 | 1.87e-28 | 111 |
MS.gene050282.t1 | MTR_3g096140 | 33.014 | 209 | 122 | 6 | 4 | 212 | 7 | 197 | 2.00e-28 | 111 |
MS.gene050282.t1 | MTR_5g069030 | 38.182 | 165 | 90 | 6 | 1 | 164 | 22 | 175 | 2.46e-28 | 113 |
MS.gene050282.t1 | MTR_2g078700 | 39.024 | 164 | 90 | 6 | 3 | 165 | 22 | 176 | 2.87e-28 | 111 |
MS.gene050282.t1 | MTR_8g076110 | 34.731 | 167 | 98 | 4 | 4 | 170 | 6 | 161 | 3.51e-28 | 109 |
MS.gene050282.t1 | MTR_1g090720 | 41.104 | 163 | 90 | 6 | 4 | 165 | 42 | 199 | 1.92e-27 | 110 |
MS.gene050282.t1 | MTR_8g099750 | 37.037 | 162 | 87 | 4 | 4 | 161 | 14 | 164 | 2.33e-27 | 105 |
MS.gene050282.t1 | MTR_8g023860 | 37.037 | 162 | 87 | 5 | 1 | 161 | 9 | 156 | 3.29e-27 | 108 |
MS.gene050282.t1 | MTR_2g068920 | 27.869 | 244 | 155 | 8 | 2 | 234 | 18 | 251 | 5.17e-27 | 106 |
MS.gene050282.t1 | MTR_2g068880 | 34.225 | 187 | 104 | 7 | 2 | 175 | 19 | 199 | 5.75e-27 | 106 |
MS.gene050282.t1 | MTR_2g062730 | 36.310 | 168 | 97 | 4 | 4 | 171 | 10 | 167 | 7.74e-27 | 106 |
MS.gene050282.t1 | MTR_1g090723 | 36.250 | 160 | 93 | 6 | 6 | 165 | 10 | 160 | 9.10e-27 | 108 |
MS.gene050282.t1 | MTR_3g116070 | 42.857 | 133 | 70 | 4 | 4 | 135 | 23 | 150 | 1.05e-26 | 106 |
MS.gene050282.t1 | MTR_1g090723 | 36.250 | 160 | 92 | 6 | 6 | 165 | 10 | 159 | 1.13e-26 | 108 |
MS.gene050282.t1 | MTR_1g090723 | 36.250 | 160 | 92 | 6 | 6 | 165 | 10 | 159 | 1.32e-26 | 108 |
MS.gene050282.t1 | MTR_7g097090 | 33.750 | 160 | 90 | 5 | 4 | 162 | 10 | 154 | 5.93e-26 | 103 |
MS.gene050282.t1 | MTR_7g011120 | 37.576 | 165 | 92 | 6 | 7 | 167 | 11 | 168 | 7.59e-26 | 103 |
MS.gene050282.t1 | MTR_7g005280 | 36.310 | 168 | 82 | 7 | 4 | 166 | 15 | 162 | 1.21e-25 | 101 |
MS.gene050282.t1 | MTR_8g063550 | 33.962 | 159 | 95 | 5 | 6 | 164 | 8 | 156 | 1.47e-25 | 103 |
MS.gene050282.t1 | MTR_8g023900 | 35.928 | 167 | 92 | 6 | 2 | 166 | 10 | 163 | 1.75e-25 | 104 |
MS.gene050282.t1 | MTR_8g023900 | 36.478 | 159 | 86 | 5 | 7 | 164 | 196 | 340 | 2.84e-24 | 101 |
MS.gene050282.t1 | MTR_0036s0150 | 34.375 | 160 | 95 | 5 | 6 | 165 | 7 | 156 | 1.95e-25 | 104 |
MS.gene050282.t1 | MTR_7g011130 | 36.628 | 172 | 90 | 6 | 7 | 167 | 22 | 185 | 2.07e-25 | 102 |
MS.gene050282.t1 | MTR_8g063550 | 33.962 | 159 | 95 | 5 | 6 | 164 | 8 | 156 | 2.29e-25 | 103 |
MS.gene050282.t1 | MTR_6g032770 | 34.146 | 164 | 98 | 5 | 3 | 165 | 17 | 171 | 2.79e-25 | 102 |
MS.gene050282.t1 | MTR_8g063550 | 33.962 | 159 | 95 | 5 | 6 | 164 | 8 | 156 | 3.77e-25 | 103 |
MS.gene050282.t1 | MTR_8g093580 | 33.962 | 159 | 95 | 5 | 6 | 164 | 8 | 156 | 4.53e-25 | 103 |
MS.gene050282.t1 | MTR_5g090970 | 35.542 | 166 | 93 | 6 | 6 | 164 | 20 | 178 | 5.93e-25 | 100 |
MS.gene050282.t1 | MTR_7g085260 | 34.940 | 166 | 96 | 5 | 3 | 165 | 16 | 172 | 1.51e-24 | 100 |
MS.gene050282.t1 | MTR_4g035590 | 32.850 | 207 | 108 | 7 | 4 | 210 | 8 | 183 | 1.59e-24 | 100 |
MS.gene050282.t1 | MTR_8g023930 | 36.145 | 166 | 91 | 5 | 2 | 166 | 22 | 173 | 1.74e-24 | 101 |
MS.gene050282.t1 | MTR_5g090970 | 34.940 | 166 | 93 | 6 | 6 | 164 | 20 | 177 | 5.88e-24 | 98.2 |
MS.gene050282.t1 | MTR_8g094580 | 35.802 | 162 | 94 | 6 | 64 | 221 | 7 | 162 | 8.80e-24 | 96.3 |
MS.gene050282.t1 | MTR_2g064470 | 31.214 | 173 | 103 | 6 | 4 | 176 | 11 | 167 | 2.05e-23 | 96.7 |
MS.gene050282.t1 | MTR_3g098810 | 33.728 | 169 | 96 | 6 | 4 | 166 | 14 | 172 | 4.09e-23 | 94.7 |
MS.gene050282.t1 | MTR_4g094302 | 33.929 | 168 | 89 | 7 | 4 | 166 | 11 | 161 | 5.01e-23 | 93.2 |
MS.gene050282.t1 | MTR_8g023840 | 36.025 | 161 | 86 | 6 | 3 | 161 | 10 | 155 | 9.50e-23 | 96.3 |
MS.gene050282.t1 | MTR_3g098810 | 34.211 | 152 | 87 | 4 | 1 | 148 | 11 | 153 | 2.64e-22 | 90.9 |
MS.gene050282.t1 | MTR_4g094302 | 37.500 | 136 | 64 | 6 | 4 | 135 | 11 | 129 | 6.37e-22 | 89.4 |
MS.gene050282.t1 | MTR_3g070040 | 35.542 | 166 | 94 | 5 | 8 | 172 | 12 | 165 | 2.15e-21 | 91.7 |
MS.gene050282.t1 | MTR_3g096140 | 32.386 | 176 | 103 | 5 | 37 | 212 | 17 | 176 | 3.48e-21 | 91.3 |
MS.gene050282.t1 | MTR_8g023880 | 33.333 | 177 | 85 | 7 | 3 | 164 | 6 | 164 | 2.11e-20 | 87.8 |
MS.gene050282.t1 | MTR_7g070140 | 42.308 | 78 | 43 | 2 | 60 | 135 | 13 | 90 | 1.46e-15 | 71.6 |
MS.gene050282.t1 | MTR_3g096400 | 28.655 | 171 | 100 | 7 | 4 | 166 | 7 | 163 | 2.65e-13 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050282.t1 | AT5G22380 | 45.968 | 248 | 118 | 3 | 2 | 249 | 3 | 234 | 1.31e-75 | 229 |
MS.gene050282.t1 | AT3G44350 | 45.850 | 253 | 107 | 6 | 7 | 249 | 8 | 240 | 5.53e-72 | 220 |
MS.gene050282.t1 | AT3G44350 | 52.147 | 163 | 73 | 3 | 2 | 164 | 3 | 160 | 1.85e-58 | 183 |
MS.gene050282.t1 | AT2G17040 | 43.931 | 173 | 75 | 6 | 6 | 174 | 8 | 162 | 5.86e-42 | 144 |
MS.gene050282.t1 | AT4G17980 | 43.114 | 167 | 81 | 7 | 4 | 166 | 6 | 162 | 3.17e-39 | 137 |
MS.gene050282.t1 | AT4G17980 | 43.114 | 167 | 81 | 7 | 4 | 166 | 6 | 162 | 5.45e-39 | 137 |
MS.gene050282.t1 | AT2G02450 | 44.025 | 159 | 76 | 5 | 6 | 164 | 53 | 198 | 1.17e-38 | 139 |
MS.gene050282.t1 | AT2G02450 | 44.025 | 159 | 76 | 5 | 6 | 164 | 53 | 198 | 1.95e-38 | 139 |
MS.gene050282.t1 | AT5G08790 | 36.702 | 188 | 105 | 5 | 3 | 187 | 6 | 182 | 1.27e-37 | 134 |
MS.gene050282.t1 | AT4G27410 | 38.037 | 163 | 89 | 5 | 3 | 165 | 13 | 163 | 4.18e-36 | 130 |
MS.gene050282.t1 | AT1G69490 | 41.615 | 161 | 86 | 4 | 4 | 164 | 9 | 161 | 1.18e-35 | 128 |
MS.gene050282.t1 | AT5G63790 | 34.862 | 218 | 119 | 6 | 3 | 216 | 49 | 247 | 1.41e-35 | 129 |
MS.gene050282.t1 | AT5G63790 | 34.862 | 218 | 119 | 6 | 3 | 216 | 59 | 257 | 1.83e-35 | 129 |
MS.gene050282.t1 | AT5G46590 | 43.293 | 164 | 83 | 6 | 4 | 166 | 6 | 160 | 8.47e-35 | 126 |
MS.gene050282.t1 | AT4G27410 | 36.364 | 176 | 91 | 6 | 3 | 165 | 13 | 180 | 2.67e-34 | 125 |
MS.gene050282.t1 | AT1G65910 | 44.172 | 163 | 79 | 7 | 4 | 165 | 6 | 157 | 4.09e-34 | 129 |
MS.gene050282.t1 | AT3G15500 | 38.272 | 162 | 88 | 5 | 3 | 164 | 13 | 162 | 4.10e-34 | 125 |
MS.gene050282.t1 | AT1G26870 | 33.716 | 261 | 135 | 10 | 2 | 239 | 14 | 259 | 4.32e-34 | 127 |
MS.gene050282.t1 | AT3G17730 | 41.718 | 163 | 85 | 6 | 3 | 165 | 5 | 157 | 4.33e-34 | 123 |
MS.gene050282.t1 | AT1G32510 | 41.176 | 170 | 84 | 6 | 4 | 166 | 6 | 166 | 4.90e-34 | 124 |
MS.gene050282.t1 | AT5G17260 | 36.759 | 253 | 120 | 14 | 3 | 246 | 5 | 226 | 9.76e-34 | 127 |
MS.gene050282.t1 | AT1G01720 | 35.393 | 178 | 103 | 5 | 4 | 181 | 7 | 172 | 8.89e-33 | 121 |
MS.gene050282.t1 | AT1G52890 | 37.267 | 161 | 89 | 5 | 4 | 164 | 14 | 162 | 9.78e-33 | 122 |
MS.gene050282.t1 | AT5G46590 | 41.722 | 151 | 82 | 4 | 4 | 153 | 6 | 151 | 2.76e-32 | 119 |
MS.gene050282.t1 | AT3G03200 | 44.242 | 165 | 75 | 7 | 4 | 164 | 6 | 157 | 1.30e-31 | 121 |
MS.gene050282.t1 | AT1G61110 | 35.429 | 175 | 98 | 5 | 3 | 169 | 15 | 182 | 1.55e-31 | 119 |
MS.gene050282.t1 | AT1G33060 | 40.361 | 166 | 85 | 6 | 1 | 164 | 21 | 174 | 1.69e-31 | 122 |
MS.gene050282.t1 | AT1G33060 | 40.361 | 166 | 85 | 6 | 1 | 164 | 21 | 174 | 1.74e-31 | 122 |
MS.gene050282.t1 | AT5G39820 | 34.361 | 227 | 121 | 9 | 2 | 208 | 18 | 236 | 1.95e-31 | 119 |
MS.gene050282.t1 | AT1G34180 | 41.718 | 163 | 79 | 6 | 6 | 165 | 18 | 167 | 2.17e-31 | 120 |
MS.gene050282.t1 | AT2G24430 | 38.462 | 169 | 91 | 6 | 4 | 171 | 16 | 172 | 2.57e-31 | 118 |
MS.gene050282.t1 | AT2G24430 | 38.462 | 169 | 91 | 6 | 4 | 171 | 16 | 172 | 2.57e-31 | 118 |
MS.gene050282.t1 | AT3G04060 | 39.157 | 166 | 86 | 5 | 3 | 165 | 19 | 172 | 2.63e-31 | 118 |
MS.gene050282.t1 | AT3G49530 | 31.783 | 258 | 156 | 7 | 1 | 253 | 10 | 252 | 3.66e-31 | 119 |
MS.gene050282.t1 | AT4G35580 | 39.024 | 164 | 90 | 5 | 1 | 164 | 6 | 159 | 4.11e-31 | 120 |
MS.gene050282.t1 | AT4G35580 | 39.024 | 164 | 90 | 5 | 1 | 164 | 6 | 159 | 4.26e-31 | 120 |
MS.gene050282.t1 | AT4G35580 | 39.024 | 164 | 90 | 5 | 1 | 164 | 6 | 159 | 4.38e-31 | 120 |
MS.gene050282.t1 | AT1G34180 | 41.718 | 163 | 79 | 6 | 6 | 165 | 18 | 167 | 5.32e-31 | 120 |
MS.gene050282.t1 | AT5G62380 | 36.585 | 164 | 93 | 5 | 1 | 164 | 4 | 156 | 6.28e-31 | 117 |
MS.gene050282.t1 | AT5G62380 | 36.585 | 164 | 93 | 5 | 1 | 164 | 4 | 156 | 6.28e-31 | 117 |
MS.gene050282.t1 | AT3G49530 | 31.783 | 258 | 156 | 7 | 1 | 253 | 10 | 252 | 6.70e-31 | 119 |
MS.gene050282.t1 | AT1G77450 | 36.364 | 165 | 95 | 5 | 4 | 168 | 10 | 164 | 1.23e-30 | 114 |
MS.gene050282.t1 | AT5G61430 | 38.650 | 163 | 90 | 6 | 3 | 165 | 15 | 167 | 1.38e-30 | 116 |
MS.gene050282.t1 | AT5G24590 | 39.634 | 164 | 90 | 5 | 1 | 164 | 10 | 164 | 1.42e-30 | 118 |
MS.gene050282.t1 | AT1G71930 | 31.330 | 233 | 136 | 7 | 1 | 224 | 1 | 218 | 4.99e-30 | 114 |
MS.gene050282.t1 | AT1G71930 | 31.330 | 233 | 136 | 7 | 1 | 224 | 1 | 218 | 4.99e-30 | 114 |
MS.gene050282.t1 | AT2G43000 | 36.000 | 175 | 99 | 5 | 6 | 179 | 20 | 182 | 5.38e-30 | 113 |
MS.gene050282.t1 | AT4G36160 | 31.364 | 220 | 128 | 5 | 3 | 210 | 9 | 217 | 6.40e-30 | 115 |
MS.gene050282.t1 | AT4G36160 | 31.364 | 220 | 128 | 5 | 3 | 210 | 9 | 217 | 6.40e-30 | 115 |
MS.gene050282.t1 | AT1G34180 | 39.766 | 171 | 83 | 6 | 6 | 165 | 18 | 179 | 6.62e-30 | 116 |
MS.gene050282.t1 | AT3G18400 | 37.500 | 168 | 92 | 5 | 2 | 169 | 3 | 157 | 6.64e-30 | 114 |
MS.gene050282.t1 | AT4G36160 | 31.364 | 220 | 128 | 5 | 3 | 210 | 13 | 221 | 7.37e-30 | 115 |
MS.gene050282.t1 | AT3G15510 | 37.791 | 172 | 94 | 5 | 8 | 172 | 21 | 186 | 1.10e-29 | 114 |
MS.gene050282.t1 | AT3G10490 | 37.349 | 166 | 93 | 6 | 3 | 167 | 26 | 181 | 1.33e-29 | 111 |
MS.gene050282.t1 | AT2G27300 | 41.985 | 131 | 70 | 3 | 4 | 134 | 14 | 138 | 1.54e-29 | 114 |
MS.gene050282.t1 | AT1G34180 | 39.766 | 171 | 83 | 6 | 6 | 165 | 18 | 179 | 1.72e-29 | 116 |
MS.gene050282.t1 | AT5G22290 | 41.727 | 139 | 73 | 4 | 6 | 142 | 23 | 155 | 2.39e-29 | 113 |
MS.gene050282.t1 | AT2G18060 | 37.267 | 161 | 90 | 4 | 4 | 164 | 9 | 158 | 3.05e-29 | 113 |
MS.gene050282.t1 | AT2G18060 | 37.267 | 161 | 90 | 4 | 4 | 164 | 9 | 158 | 3.05e-29 | 113 |
MS.gene050282.t1 | AT3G10480 | 39.024 | 164 | 89 | 7 | 3 | 165 | 26 | 179 | 3.19e-29 | 114 |
MS.gene050282.t1 | AT5G07680 | 36.196 | 163 | 94 | 4 | 3 | 165 | 16 | 168 | 3.23e-29 | 112 |
MS.gene050282.t1 | AT5G07680 | 36.196 | 163 | 94 | 4 | 3 | 165 | 2 | 154 | 3.29e-29 | 112 |
MS.gene050282.t1 | AT3G10480 | 39.394 | 165 | 86 | 7 | 3 | 165 | 26 | 178 | 5.90e-29 | 114 |
MS.gene050282.t1 | AT3G15170 | 39.264 | 163 | 89 | 6 | 4 | 165 | 20 | 173 | 7.06e-29 | 111 |
MS.gene050282.t1 | AT1G34190 | 38.509 | 161 | 87 | 6 | 6 | 165 | 18 | 167 | 7.45e-29 | 114 |
MS.gene050282.t1 | AT5G66300 | 27.622 | 286 | 162 | 8 | 3 | 254 | 11 | 285 | 1.30e-28 | 110 |
MS.gene050282.t1 | AT3G44290 | 34.503 | 171 | 94 | 4 | 6 | 176 | 16 | 168 | 1.93e-28 | 108 |
MS.gene050282.t1 | AT3G12910 | 35.227 | 176 | 98 | 5 | 6 | 171 | 23 | 192 | 2.55e-28 | 109 |
MS.gene050282.t1 | AT1G62700 | 37.888 | 161 | 89 | 7 | 4 | 164 | 7 | 156 | 2.88e-28 | 111 |
MS.gene050282.t1 | AT1G62700 | 37.888 | 161 | 89 | 7 | 4 | 164 | 7 | 156 | 2.88e-28 | 111 |
MS.gene050282.t1 | AT3G10490 | 37.805 | 164 | 91 | 6 | 3 | 165 | 26 | 179 | 4.77e-28 | 111 |
MS.gene050282.t1 | AT5G18270 | 36.196 | 163 | 95 | 3 | 3 | 165 | 20 | 173 | 6.08e-28 | 109 |
MS.gene050282.t1 | AT3G44290 | 34.503 | 171 | 94 | 4 | 6 | 176 | 16 | 168 | 9.00e-28 | 108 |
MS.gene050282.t1 | AT5G39610 | 34.409 | 186 | 108 | 6 | 3 | 188 | 19 | 190 | 1.15e-27 | 107 |
MS.gene050282.t1 | AT1G76420 | 39.286 | 168 | 79 | 7 | 4 | 165 | 22 | 172 | 1.31e-27 | 108 |
MS.gene050282.t1 | AT5G53950 | 38.415 | 164 | 89 | 6 | 4 | 165 | 17 | 170 | 1.34e-27 | 109 |
MS.gene050282.t1 | AT5G18270 | 36.196 | 163 | 95 | 3 | 3 | 165 | 20 | 173 | 1.35e-27 | 108 |
MS.gene050282.t1 | AT3G04070 | 38.150 | 173 | 89 | 7 | 4 | 167 | 10 | 173 | 1.42e-27 | 108 |
MS.gene050282.t1 | AT1G54330 | 36.810 | 163 | 90 | 4 | 3 | 165 | 5 | 154 | 1.44e-27 | 107 |
MS.gene050282.t1 | AT1G12260 | 35.185 | 162 | 94 | 6 | 3 | 164 | 6 | 156 | 1.81e-27 | 108 |
MS.gene050282.t1 | AT1G32770 | 36.842 | 171 | 89 | 5 | 4 | 164 | 16 | 177 | 2.52e-27 | 108 |
MS.gene050282.t1 | AT1G12260 | 35.185 | 162 | 94 | 6 | 3 | 164 | 6 | 156 | 3.86e-27 | 108 |
MS.gene050282.t1 | AT1G79580 | 36.905 | 168 | 95 | 5 | 4 | 171 | 17 | 173 | 8.64e-27 | 107 |
MS.gene050282.t1 | AT1G79580 | 36.905 | 168 | 95 | 5 | 4 | 171 | 17 | 173 | 8.64e-27 | 107 |
MS.gene050282.t1 | AT1G79580 | 36.905 | 168 | 95 | 5 | 4 | 171 | 17 | 173 | 8.64e-27 | 107 |
MS.gene050282.t1 | AT1G79580 | 36.905 | 168 | 95 | 5 | 4 | 171 | 17 | 173 | 8.64e-27 | 107 |
MS.gene050282.t1 | AT1G79580 | 36.905 | 168 | 95 | 5 | 4 | 171 | 17 | 173 | 8.64e-27 | 107 |
MS.gene050282.t1 | AT3G61910 | 31.551 | 187 | 116 | 4 | 4 | 182 | 11 | 193 | 2.13e-26 | 105 |
MS.gene050282.t1 | AT5G64060 | 34.545 | 165 | 94 | 6 | 3 | 165 | 5 | 157 | 3.50e-26 | 105 |
MS.gene050282.t1 | AT3G04070 | 36.702 | 188 | 87 | 8 | 4 | 167 | 10 | 189 | 5.11e-26 | 104 |
MS.gene050282.t1 | AT4G01550 | 38.272 | 162 | 85 | 5 | 7 | 166 | 7 | 155 | 9.07e-26 | 105 |
MS.gene050282.t1 | AT2G46770 | 34.078 | 179 | 102 | 5 | 4 | 172 | 16 | 188 | 1.66e-25 | 103 |
MS.gene050282.t1 | AT3G10500 | 35.152 | 165 | 93 | 7 | 3 | 165 | 8 | 160 | 5.21e-25 | 103 |
MS.gene050282.t1 | AT3G12977 | 33.742 | 163 | 97 | 4 | 3 | 165 | 17 | 168 | 6.27e-25 | 100 |
MS.gene050282.t1 | AT3G10480 | 32.143 | 196 | 91 | 7 | 3 | 165 | 26 | 212 | 1.25e-24 | 102 |
MS.gene050282.t1 | AT1G33280 | 34.731 | 167 | 97 | 4 | 4 | 170 | 8 | 162 | 1.71e-24 | 99.8 |
MS.gene050282.t1 | AT5G04410 | 36.196 | 163 | 94 | 6 | 3 | 165 | 8 | 160 | 1.76e-24 | 102 |
MS.gene050282.t1 | AT3G29035 | 35.000 | 160 | 94 | 5 | 3 | 162 | 23 | 172 | 1.97e-24 | 99.8 |
MS.gene050282.t1 | AT4G28530 | 30.899 | 178 | 95 | 5 | 4 | 166 | 10 | 174 | 3.05e-24 | 99.8 |
MS.gene050282.t1 | AT5G09330 | 33.951 | 162 | 95 | 6 | 4 | 164 | 6 | 156 | 3.93e-24 | 100 |
MS.gene050282.t1 | AT5G09330 | 33.951 | 162 | 95 | 6 | 4 | 164 | 6 | 156 | 3.93e-24 | 100 |
MS.gene050282.t1 | AT5G09330 | 33.951 | 162 | 95 | 6 | 4 | 164 | 6 | 156 | 3.93e-24 | 100 |
MS.gene050282.t1 | AT5G09330 | 33.951 | 162 | 95 | 6 | 4 | 164 | 6 | 156 | 3.93e-24 | 100 |
MS.gene050282.t1 | AT5G09330 | 33.951 | 162 | 95 | 6 | 4 | 164 | 6 | 156 | 3.93e-24 | 100 |
MS.gene050282.t1 | AT4G10350 | 34.320 | 169 | 102 | 4 | 4 | 172 | 9 | 168 | 4.13e-24 | 99.4 |
MS.gene050282.t1 | AT1G32870 | 37.654 | 162 | 91 | 6 | 4 | 165 | 10 | 161 | 5.31e-24 | 100 |
MS.gene050282.t1 | AT1G32870 | 37.654 | 162 | 91 | 6 | 4 | 165 | 10 | 161 | 5.86e-24 | 100 |
MS.gene050282.t1 | AT5G13180 | 35.366 | 164 | 90 | 6 | 4 | 166 | 14 | 162 | 6.46e-24 | 97.1 |
MS.gene050282.t1 | AT2G33480 | 33.742 | 163 | 91 | 5 | 4 | 166 | 15 | 160 | 6.93e-24 | 97.4 |
MS.gene050282.t1 | AT1G32870 | 37.654 | 162 | 91 | 6 | 4 | 165 | 46 | 197 | 7.18e-24 | 100 |
MS.gene050282.t1 | AT1G56010 | 32.335 | 167 | 95 | 5 | 4 | 165 | 19 | 172 | 7.36e-24 | 98.2 |
MS.gene050282.t1 | AT2G33480 | 33.129 | 163 | 94 | 5 | 4 | 166 | 15 | 162 | 2.59e-23 | 95.9 |
MS.gene050282.t1 | AT1G52880 | 37.195 | 164 | 91 | 5 | 8 | 165 | 21 | 178 | 1.05e-22 | 95.1 |
MS.gene050282.t1 | AT5G04395 | 37.086 | 151 | 80 | 5 | 3 | 141 | 27 | 174 | 6.63e-22 | 90.1 |
MS.gene050282.t1 | AT4G01520 | 31.325 | 166 | 98 | 5 | 5 | 167 | 5 | 157 | 1.56e-21 | 91.7 |
MS.gene050282.t1 | AT3G55210 | 31.176 | 170 | 93 | 5 | 4 | 162 | 11 | 167 | 7.18e-21 | 89.4 |
MS.gene050282.t1 | AT3G56530 | 32.704 | 159 | 96 | 3 | 4 | 162 | 52 | 199 | 7.20e-21 | 90.1 |
MS.gene050282.t1 | AT4G01540 | 32.317 | 164 | 95 | 5 | 7 | 167 | 7 | 157 | 8.71e-21 | 90.9 |
MS.gene050282.t1 | AT4G01540 | 32.317 | 164 | 95 | 5 | 7 | 167 | 7 | 157 | 9.82e-21 | 90.5 |
MS.gene050282.t1 | AT4G01540 | 32.317 | 164 | 95 | 5 | 7 | 167 | 7 | 157 | 1.11e-20 | 90.9 |
MS.gene050282.t1 | AT4G01540 | 32.317 | 164 | 95 | 5 | 7 | 167 | 7 | 157 | 1.17e-20 | 90.9 |
MS.gene050282.t1 | AT5G61430 | 40.196 | 102 | 57 | 2 | 64 | 165 | 7 | 104 | 2.85e-20 | 87.8 |
MS.gene050282.t1 | AT3G04420 | 31.098 | 164 | 99 | 5 | 1 | 164 | 1 | 150 | 1.35e-18 | 83.6 |
MS.gene050282.t1 | AT3G04420 | 35.294 | 136 | 84 | 4 | 1 | 136 | 1 | 132 | 1.72e-18 | 84.0 |
MS.gene050282.t1 | AT5G64530 | 33.824 | 136 | 65 | 7 | 3 | 134 | 2 | 116 | 1.08e-17 | 78.2 |
MS.gene050282.t1 | AT5G64530 | 33.824 | 136 | 65 | 7 | 3 | 134 | 2 | 116 | 1.27e-17 | 78.6 |
MS.gene050282.t1 | AT1G56010 | 37.255 | 102 | 61 | 2 | 64 | 165 | 7 | 105 | 1.34e-17 | 80.1 |
MS.gene050282.t1 | AT1G01010 | 30.366 | 191 | 109 | 7 | 7 | 187 | 6 | 182 | 2.93e-17 | 80.9 |
MS.gene050282.t1 | AT3G12977 | 37.255 | 102 | 59 | 2 | 64 | 165 | 19 | 115 | 5.67e-17 | 77.8 |
MS.gene050282.t1 | AT1G02230 | 33.750 | 160 | 88 | 7 | 5 | 161 | 4 | 148 | 2.08e-16 | 78.2 |
MS.gene050282.t1 | AT1G02250 | 32.919 | 161 | 88 | 8 | 5 | 161 | 4 | 148 | 2.95e-16 | 77.8 |
MS.gene050282.t1 | AT4G10350 | 35.185 | 108 | 64 | 2 | 65 | 172 | 20 | 121 | 1.03e-15 | 75.5 |
MS.gene050282.t1 | AT3G10490 | 41.463 | 82 | 43 | 2 | 84 | 165 | 3 | 79 | 3.48e-15 | 74.3 |
MS.gene050282.t1 | AT3G10490 | 41.463 | 82 | 43 | 2 | 84 | 165 | 3 | 79 | 3.48e-15 | 74.3 |
MS.gene050282.t1 | AT2G18060 | 45.455 | 77 | 34 | 3 | 88 | 164 | 2 | 70 | 8.63e-15 | 72.8 |
MS.gene050282.t1 | AT2G43000 | 37.374 | 99 | 57 | 2 | 81 | 179 | 11 | 104 | 2.30e-14 | 70.1 |
MS.gene050282.t1 | AT2G33480 | 35.294 | 102 | 56 | 3 | 67 | 166 | 12 | 105 | 3.10e-14 | 70.1 |
MS.gene050282.t1 | AT1G02220 | 27.389 | 157 | 98 | 5 | 5 | 161 | 4 | 144 | 4.22e-13 | 68.6 |
MS.gene050282.t1 | AT3G04430 | 35.514 | 107 | 64 | 3 | 10 | 116 | 6 | 107 | 2.07e-12 | 64.7 |
MS.gene050282.t1 | AT5G14000 | 31.343 | 134 | 79 | 5 | 4 | 134 | 15 | 138 | 6.73e-12 | 62.4 |
MS.gene050282.t1 | AT5G22290 | 53.571 | 56 | 23 | 2 | 89 | 142 | 2 | 56 | 8.93e-12 | 63.5 |
MS.gene050282.t1 | AT5G14000 | 31.343 | 134 | 79 | 5 | 4 | 134 | 15 | 138 | 1.11e-11 | 62.8 |
Find 58 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCGCAAGTTGAATCTTTC+TGG | 0.167753 | 7.3:-9331809 | None:intergenic |
GAGCAAGTGGATTGGTTCTT+AGG | 0.188696 | 7.3:+9331972 | MS.gene050282:CDS |
CTCACTTCACTTTCTTGCCT+TGG | 0.279048 | 7.3:-9330991 | None:intergenic |
AAGAGGATGTTTCATCTAAC+TGG | 0.287039 | 7.3:-9331191 | None:intergenic |
TCTTCAGATAATCGCATCAT+TGG | 0.352302 | 7.3:+9331084 | MS.gene050282:CDS |
TTGGAAAATGAACGAGTATA+AGG | 0.364384 | 7.3:+9331164 | MS.gene050282:CDS |
TCTGAAGAATAAACATGATT+AGG | 0.369085 | 7.3:-9331069 | None:intergenic |
TTATGATGCTTTGTTGGATT+GGG | 0.384703 | 7.3:+9331950 | MS.gene050282:CDS |
ATTATGATGCTTTGTTGGAT+TGG | 0.386486 | 7.3:+9331949 | MS.gene050282:CDS |
TGCTGATTATGATGCTTTGT+TGG | 0.395773 | 7.3:+9331944 | MS.gene050282:CDS |
TATCTTCACAATATGCTTGA+AGG | 0.404066 | 7.3:+9330437 | MS.gene050282:CDS |
CATTGGAGTGAAAAGAACTA+TGG | 0.407082 | 7.3:+9331101 | MS.gene050282:CDS |
CCAGTGTTGGTGAGACGCTT+TGG | 0.428965 | 7.3:-9331024 | None:intergenic |
CATAATCAGCAATATCCATT+TGG | 0.446503 | 7.3:-9331932 | None:intergenic |
GAAATAAGCTCTTCTTCTGT+AGG | 0.449332 | 7.3:-9330410 | None:intergenic |
TATATTAACGACTGGTATAA+CGG | 0.454373 | 7.3:-9330483 | None:intergenic |
AGCAAGTGGATTGGTTCTTA+GGG | 0.460177 | 7.3:+9331973 | MS.gene050282:CDS |
TCTATAGAGGAAGAGCTCTC+TGG | 0.482763 | 7.3:-9331873 | None:intergenic |
TTTATACGTGGGAGTTGTGA+TGG | 0.487627 | 7.3:-9330518 | None:intergenic |
CAAATGGAAAGAAAACTGAT+TGG | 0.496748 | 7.3:+9331145 | MS.gene050282:CDS |
CCAAAGCGTCTCACCAACAC+TGG | 0.504150 | 7.3:+9331024 | MS.gene050282:CDS |
ACATGGGTTGTAACCCTCCT+TGG | 0.505741 | 7.3:-9331768 | None:intergenic |
AGCTTCTCCAACCTCTTGTG+AGG | 0.507371 | 7.3:-9331907 | None:intergenic |
GTCTCACCAACACTGGGTAC+TGG | 0.511931 | 7.3:+9331031 | MS.gene050282:CDS |
TTCAAACAAAGTAGCTCCTA+AGG | 0.519978 | 7.3:+9331212 | MS.gene050282:CDS |
GGCTTTCCAGTACCCAGTGT+TGG | 0.521942 | 7.3:-9331037 | None:intergenic |
AGGAGCTACTTTGTTTGAAG+AGG | 0.523871 | 7.3:-9331208 | None:intergenic |
GGTTGGAGAAGCTAGCCAAA+TGG | 0.532147 | 7.3:+9331917 | MS.gene050282:CDS |
AAATAAGCTCTTCTTCTGTA+GGG | 0.541701 | 7.3:-9330409 | None:intergenic |
TATAGTGGAAGAGCTCCAAA+TGG | 0.542069 | 7.3:+9331129 | MS.gene050282:CDS |
GCTTCTCCAACCTCTTGTGA+GGG | 0.545254 | 7.3:-9331906 | None:intergenic |
TGGATTGGGAGCAAGTGGAT+TGG | 0.559258 | 7.3:+9331964 | MS.gene050282:CDS |
GGGTTGAACATGGTCTATAG+AGG | 0.566952 | 7.3:-9331886 | None:intergenic |
TAATCGTATATATTAACGAC+TGG | 0.569424 | 7.3:-9330491 | None:intergenic |
AGTGGATTGGTTCTTAGGGT+CGG | 0.569927 | 7.3:+9331977 | MS.gene050282:CDS |
GTTCAACCCTCACAAGAGGT+TGG | 0.570806 | 7.3:+9331900 | MS.gene050282:CDS |
ACTGGGTACTGGAAAGCCAC+TGG | 0.577981 | 7.3:+9331042 | MS.gene050282:CDS |
CCTCTTGTGAGGGTTGAACA+TGG | 0.579803 | 7.3:-9331896 | None:intergenic |
ACCCATGTTCAAAATGCTCA+AGG | 0.588355 | 7.3:+9331783 | MS.gene050282:CDS |
TGGGTTGTAACCCTCCTTGG+TGG | 0.590628 | 7.3:-9331765 | None:intergenic |
GTTGTAACCCTCCTTGGTGG+TGG | 0.601972 | 7.3:-9331762 | None:intergenic |
CCATGTTCAACCCTCACAAG+AGG | 0.611064 | 7.3:+9331896 | MS.gene050282:CDS |
CAAGAAAGTGAAGTGAGAGG+AGG | 0.612857 | 7.3:+9330997 | MS.gene050282:CDS |
TAGACGACCACCACCAAGGA+GGG | 0.617242 | 7.3:+9331755 | MS.gene050282:CDS |
ACATGATGTTCAAATCTCGA+TGG | 0.619431 | 7.3:+9331830 | MS.gene050282:CDS |
CAAAGCGTCTCACCAACACT+GGG | 0.625021 | 7.3:+9331025 | MS.gene050282:CDS |
GGATGTTTCATCTAACTGGA+TGG | 0.629602 | 7.3:-9331187 | None:intergenic |
TTTGTTGGATTGGGAGCAAG+TGG | 0.640642 | 7.3:+9331959 | MS.gene050282:CDS |
GTAGGGTAGAAACGATAACC+TGG | 0.640687 | 7.3:-9330392 | None:intergenic |
CCCATGTTCAAAATGCTCAA+GGG | 0.648110 | 7.3:+9331784 | MS.gene050282:CDS |
AGTATGGACAATATGCCACC+AGG | 0.650912 | 7.3:+9330374 | None:intergenic |
AACATGATTAGGAGATCCAG+TGG | 0.656277 | 7.3:-9331058 | None:intergenic |
GTATGAGAGACACGGAACAA+TGG | 0.656880 | 7.3:+9330956 | MS.gene050282:CDS |
AGAGGCAAGTATGAGAGACA+CGG | 0.662506 | 7.3:+9330948 | MS.gene050282:CDS |
AGGCAAGAAAGTGAAGTGAG+AGG | 0.663868 | 7.3:+9330994 | MS.gene050282:CDS |
TTGATAGACGACCACCACCA+AGG | 0.683488 | 7.3:+9331751 | MS.gene050282:CDS |
ATAGACGACCACCACCAAGG+AGG | 0.747279 | 7.3:+9331754 | MS.gene050282:CDS |
GGGTAGAAACGATAACCTGG+TGG | 0.760431 | 7.3:-9330389 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAACTCAAAAAAAAAAAAA+AGG | + | chr7.3:9330708-9330727 | MS.gene050282:intron | 10.0% |
!!! | AATTTAGTTAATTTGTTTTA+CGG | + | chr7.3:9331429-9331448 | MS.gene050282:intron | 10.0% |
!!! | TTTGATATTGATTATTTAAT+TGG | + | chr7.3:9331664-9331683 | MS.gene050282:intron | 10.0% |
!! | ATTTACAATATTGCAATATA+TGG | - | chr7.3:9330875-9330894 | None:intergenic | 15.0% |
!!! | ATTTAGTTAATTTGTTTTAC+GGG | + | chr7.3:9331430-9331449 | MS.gene050282:intron | 15.0% |
!!! | TTTTATTCAAAATACTTAAC+TGG | - | chr7.3:9330767-9330786 | None:intergenic | 15.0% |
!! | AATTCAAACCAATATAAATC+AGG | - | chr7.3:9331312-9331331 | None:intergenic | 20.0% |
!! | AGTTACAATAAGATATTACT+AGG | + | chr7.3:9330671-9330690 | MS.gene050282:intron | 20.0% |
!!! | ATTAACCTTTTGATTAATAC+TGG | + | chr7.3:9331628-9331647 | MS.gene050282:intron | 20.0% |
!!! | CTAACAGACTTTATTTTTTT+AGG | - | chr7.3:9331269-9331288 | None:intergenic | 20.0% |
!!! | CTATCTTTATTCTTTTTTTG+AGG | + | chr7.3:9331498-9331517 | MS.gene050282:intron | 20.0% |
!!! | TTGCAATATATGGATTTTTT+CGG | - | chr7.3:9330865-9330884 | None:intergenic | 20.0% |
!!! | TTTAGTTAATTTGTTTTACG+GGG | + | chr7.3:9331431-9331450 | MS.gene050282:intron | 20.0% |
!!! | TTTGTTTTGTTTTGTTTTAC+AGG | + | chr7.3:9331582-9331601 | MS.gene050282:intron | 20.0% |
! | AATTGATAGATCTCTAACTT+TGG | + | chr7.3:9330612-9330631 | MS.gene050282:intron | 25.0% |
! | ATTAGCCAGTATTAATCAAA+AGG | - | chr7.3:9331636-9331655 | None:intergenic | 25.0% |
! | GTATACAACCTGATTTATAT+TGG | + | chr7.3:9331301-9331320 | MS.gene050282:intron | 25.0% |
! | TAATCGTATATATTAACGAC+TGG | - | chr7.3:9330494-9330513 | None:intergenic | 25.0% |
! | TATATTAACGACTGGTATAA+CGG | - | chr7.3:9330486-9330505 | None:intergenic | 25.0% |
! | TATTTAATTGGTTGCAGTTA+AGG | + | chr7.3:9331676-9331695 | MS.gene050282:intron | 25.0% |
! | TCTGAAGAATAAACATGATT+AGG | - | chr7.3:9331072-9331091 | None:intergenic | 25.0% |
!! | ACAAAAAATCAAAGTGCTTA+AGG | + | chr7.3:9331724-9331743 | MS.gene050282:CDS | 25.0% |
!! | CAAAAAATCAAAGTGCTTAA+GGG | + | chr7.3:9331725-9331744 | MS.gene050282:CDS | 25.0% |
!!! | ACTTTGATTTTTTGTACACT+CGG | - | chr7.3:9331719-9331738 | None:intergenic | 25.0% |
!!! | TATTGGTTTTCAGAAATTTC+AGG | + | chr7.3:9330925-9330944 | MS.gene050282:intron | 25.0% |
!!! | TGCAATATATGGATTTTTTC+GGG | - | chr7.3:9330864-9330883 | None:intergenic | 25.0% |
!!! | TTTTTGAGGTTCATATTAGA+TGG | + | chr7.3:9331512-9331531 | MS.gene050282:intron | 25.0% |
AAATAAGCTCTTCTTCTGTA+GGG | - | chr7.3:9330412-9330431 | None:intergenic | 30.0% | |
ACCAATATGTACGAAATTCA+AGG | - | chr7.3:9331351-9331370 | None:intergenic | 30.0% | |
ACCTTGAATTTCGTACATAT+TGG | + | chr7.3:9331347-9331366 | MS.gene050282:intron | 30.0% | |
ATATGATATGTACGTACCTT+AGG | - | chr7.3:9331231-9331250 | None:intergenic | 30.0% | |
CAAATGGAAAGAAAACTGAT+TGG | + | chr7.3:9331145-9331164 | MS.gene050282:CDS | 30.0% | |
CATAATCAGCAATATCCATT+TGG | - | chr7.3:9331935-9331954 | None:intergenic | 30.0% | |
TATCATATGCATCTTGAACT+AGG | + | chr7.3:9331243-9331262 | MS.gene050282:intron | 30.0% | |
TATCTTCACAATATGCTTGA+AGG | + | chr7.3:9330437-9330456 | MS.gene050282:CDS | 30.0% | |
TATGATCCACGATATAAAAC+TGG | - | chr7.3:9331541-9331560 | None:intergenic | 30.0% | |
TCATGGAAAGATTTATACGT+GGG | - | chr7.3:9330532-9330551 | None:intergenic | 30.0% | |
TTGGAAAATGAACGAGTATA+AGG | + | chr7.3:9331164-9331183 | MS.gene050282:CDS | 30.0% | |
! | AGAACTATGGTTTTCTATAG+TGG | + | chr7.3:9331114-9331133 | MS.gene050282:CDS | 30.0% |
! | ATTATGATGCTTTGTTGGAT+TGG | + | chr7.3:9331949-9331968 | MS.gene050282:CDS | 30.0% |
! | CAATCAGTTTTCTTTCCATT+TGG | - | chr7.3:9331147-9331166 | None:intergenic | 30.0% |
! | GTGATTTTCATGGGAAAAAA+TGG | + | chr7.3:9331469-9331488 | MS.gene050282:intron | 30.0% |
! | TAATAAGGCGTGATTTTCAT+GGG | + | chr7.3:9331460-9331479 | MS.gene050282:intron | 30.0% |
! | TTATGATGCTTTGTTGGATT+GGG | + | chr7.3:9331950-9331969 | MS.gene050282:CDS | 30.0% |
!! | AATGGTTCTTTTTCATTCCA+AGG | + | chr7.3:9330974-9330993 | MS.gene050282:CDS | 30.0% |
AAGAGGATGTTTCATCTAAC+TGG | - | chr7.3:9331194-9331213 | None:intergenic | 35.0% | |
ACAATAACGTAGTCAAGTCA+TGG | - | chr7.3:9330549-9330568 | None:intergenic | 35.0% | |
ACATGATGTTCAAATCTCGA+TGG | + | chr7.3:9331830-9331849 | MS.gene050282:CDS | 35.0% | |
CATTGGAGTGAAAAGAACTA+TGG | + | chr7.3:9331101-9331120 | MS.gene050282:CDS | 35.0% | |
GAAATAAGCTCTTCTTCTGT+AGG | - | chr7.3:9330413-9330432 | None:intergenic | 35.0% | |
GTCATGGAAAGATTTATACG+TGG | - | chr7.3:9330533-9330552 | None:intergenic | 35.0% | |
TCTTCAGATAATCGCATCAT+TGG | + | chr7.3:9331084-9331103 | MS.gene050282:CDS | 35.0% | |
TTCAAACAAAGTAGCTCCTA+AGG | + | chr7.3:9331212-9331231 | MS.gene050282:CDS | 35.0% | |
TTTACGGGGTCAATCTAATA+AGG | + | chr7.3:9331445-9331464 | MS.gene050282:intron | 35.0% | |
TTTCATGGGAAAAAATGGCA+GGG | + | chr7.3:9331474-9331493 | MS.gene050282:intron | 35.0% | |
! | CTAATAAGGCGTGATTTTCA+TGG | + | chr7.3:9331459-9331478 | MS.gene050282:intron | 35.0% |
! | GTTTTCAGAAATTTCAGGAG+AGG | + | chr7.3:9330930-9330949 | MS.gene050282:intron | 35.0% |
! | TGCTGATTATGATGCTTTGT+TGG | + | chr7.3:9331944-9331963 | MS.gene050282:CDS | 35.0% |
! | TTTTCATGGGAAAAAATGGC+AGG | + | chr7.3:9331473-9331492 | MS.gene050282:intron | 35.0% |
!! | TGGAAACCAGTTTTATATCG+TGG | + | chr7.3:9331532-9331551 | MS.gene050282:intron | 35.0% |
AACATGATTAGGAGATCCAG+TGG | - | chr7.3:9331061-9331080 | None:intergenic | 40.0% | |
ACCCATGTTCAAAATGCTCA+AGG | + | chr7.3:9331783-9331802 | MS.gene050282:CDS | 40.0% | |
CCCATGTTCAAAATGCTCAA+GGG | + | chr7.3:9331784-9331803 | MS.gene050282:CDS | 40.0% | |
GGATGTTTCATCTAACTGGA+TGG | - | chr7.3:9331190-9331209 | None:intergenic | 40.0% | |
TTTATACGTGGGAGTTGTGA+TGG | - | chr7.3:9330521-9330540 | None:intergenic | 40.0% | |
! | AGGAGCTACTTTGTTTGAAG+AGG | - | chr7.3:9331211-9331230 | None:intergenic | 40.0% |
! | CCCTTGAGCATTTTGAACAT+GGG | - | chr7.3:9331787-9331806 | None:intergenic | 40.0% |
! | GTTCGCAAGTTGAATCTTTC+TGG | - | chr7.3:9331812-9331831 | None:intergenic | 40.0% |
! | TATAGTGGAAGAGCTCCAAA+TGG | + | chr7.3:9331129-9331148 | MS.gene050282:CDS | 40.0% |
!! | AGCAAGTGGATTGGTTCTTA+GGG | + | chr7.3:9331973-9331992 | MS.gene050282:CDS | 40.0% |
AGAGGCAAGTATGAGAGACA+CGG | + | chr7.3:9330948-9330967 | MS.gene050282:CDS | 45.0% | |
AGGCAAGAAAGTGAAGTGAG+AGG | + | chr7.3:9330994-9331013 | MS.gene050282:CDS | 45.0% | |
CAAGAAAGTGAAGTGAGAGG+AGG | + | chr7.3:9330997-9331016 | MS.gene050282:CDS | 45.0% | |
CTCACTTCACTTTCTTGCCT+TGG | - | chr7.3:9330994-9331013 | None:intergenic | 45.0% | |
GGGTTGAACATGGTCTATAG+AGG | - | chr7.3:9331889-9331908 | None:intergenic | 45.0% | |
GTAGGGTAGAAACGATAACC+TGG | - | chr7.3:9330395-9330414 | None:intergenic | 45.0% | |
GTATGAGAGACACGGAACAA+TGG | + | chr7.3:9330956-9330975 | MS.gene050282:CDS | 45.0% | |
TCTATAGAGGAAGAGCTCTC+TGG | - | chr7.3:9331876-9331895 | None:intergenic | 45.0% | |
! | GCCCTTGAGCATTTTGAACA+TGG | - | chr7.3:9331788-9331807 | None:intergenic | 45.0% |
! | TTTGTTGGATTGGGAGCAAG+TGG | + | chr7.3:9331959-9331978 | MS.gene050282:CDS | 45.0% |
!! | AGTGGATTGGTTCTTAGGGT+CGG | + | chr7.3:9331977-9331996 | MS.gene050282:CDS | 45.0% |
!! | GAGCAAGTGGATTGGTTCTT+AGG | + | chr7.3:9331972-9331991 | MS.gene050282:CDS | 45.0% |
!!! | TTTTTTTCTTATAAAATTAT+TGG | + | chr7.3:9330908-9330927 | MS.gene050282:intron | 5.0% |
AGCTTCTCCAACCTCTTGTG+AGG | - | chr7.3:9331910-9331929 | None:intergenic | 50.0% | |
CCATGTTCAACCCTCACAAG+AGG | + | chr7.3:9331896-9331915 | MS.gene050282:CDS | 50.0% | |
CCTCTTGTGAGGGTTGAACA+TGG | - | chr7.3:9331899-9331918 | None:intergenic | 50.0% | |
GCTTCTCCAACCTCTTGTGA+GGG | - | chr7.3:9331909-9331928 | None:intergenic | 50.0% | |
GGGTAGAAACGATAACCTGG+TGG | - | chr7.3:9330392-9330411 | None:intergenic | 50.0% | |
GGTTGGAGAAGCTAGCCAAA+TGG | + | chr7.3:9331917-9331936 | MS.gene050282:CDS | 50.0% | |
GTTCAACCCTCACAAGAGGT+TGG | + | chr7.3:9331900-9331919 | MS.gene050282:CDS | 50.0% | |
TTGATAGACGACCACCACCA+AGG | + | chr7.3:9331751-9331770 | MS.gene050282:CDS | 50.0% | |
! | ACATGGGTTGTAACCCTCCT+TGG | - | chr7.3:9331771-9331790 | None:intergenic | 50.0% |
! | CAAAGCGTCTCACCAACACT+GGG | + | chr7.3:9331025-9331044 | MS.gene050282:CDS | 50.0% |
! | TGGATTGGGAGCAAGTGGAT+TGG | + | chr7.3:9331964-9331983 | MS.gene050282:CDS | 50.0% |
ATAGACGACCACCACCAAGG+AGG | + | chr7.3:9331754-9331773 | MS.gene050282:CDS | 55.0% | |
GGCTTTCCAGTACCCAGTGT+TGG | - | chr7.3:9331040-9331059 | None:intergenic | 55.0% | |
GTCTCACCAACACTGGGTAC+TGG | + | chr7.3:9331031-9331050 | MS.gene050282:CDS | 55.0% | |
GTTGTAACCCTCCTTGGTGG+TGG | - | chr7.3:9331765-9331784 | None:intergenic | 55.0% | |
TAGACGACCACCACCAAGGA+GGG | + | chr7.3:9331755-9331774 | MS.gene050282:CDS | 55.0% | |
TGGGTTGTAACCCTCCTTGG+TGG | - | chr7.3:9331768-9331787 | None:intergenic | 55.0% | |
! | CCAAAGCGTCTCACCAACAC+TGG | + | chr7.3:9331024-9331043 | MS.gene050282:CDS | 55.0% |
!! | ACTGGGTACTGGAAAGCCAC+TGG | + | chr7.3:9331042-9331061 | MS.gene050282:CDS | 55.0% |
!! | CCAGTGTTGGTGAGACGCTT+TGG | - | chr7.3:9331027-9331046 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 9330377 | 9332007 | 9330377 | ID=MS.gene050282 |
chr7.3 | mRNA | 9330377 | 9332007 | 9330377 | ID=MS.gene050282.t1;Parent=MS.gene050282 |
chr7.3 | exon | 9330377 | 9330533 | 9330377 | ID=MS.gene050282.t1.exon1;Parent=MS.gene050282.t1 |
chr7.3 | CDS | 9330377 | 9330533 | 9330377 | ID=cds.MS.gene050282.t1;Parent=MS.gene050282.t1 |
chr7.3 | exon | 9330938 | 9331233 | 9330938 | ID=MS.gene050282.t1.exon2;Parent=MS.gene050282.t1 |
chr7.3 | CDS | 9330938 | 9331233 | 9330938 | ID=cds.MS.gene050282.t1;Parent=MS.gene050282.t1 |
chr7.3 | exon | 9331693 | 9332007 | 9331693 | ID=MS.gene050282.t1.exon3;Parent=MS.gene050282.t1 |
chr7.3 | CDS | 9331693 | 9332007 | 9331693 | ID=cds.MS.gene050282.t1;Parent=MS.gene050282.t1 |
Gene Sequence |
Protein sequence |