Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050730.t1 | XP_003626183.1 | 93.7 | 347 | 5 | 1 | 1 | 330 | 1 | 347 | 1.00E-178 | 636 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050730.t1 | O80492 | 77.2 | 347 | 62 | 1 | 1 | 330 | 1 | 347 | 9.3e-149 | 527.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050730.t1 | G7KWI9 | 93.7 | 347 | 5 | 1 | 1 | 330 | 1 | 347 | 7.2e-179 | 636.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050730 | MS.gene050733 | 0.878352 | 3.01E-69 | -1.69E-46 |
| MS.gene050730 | MS.gene050735 | 0.889723 | 1.88E-73 | -1.69E-46 |
| MS.gene050730 | MS.gene072536 | 0.944722 | 1.15E-103 | -1.69E-46 |
| MS.gene050730 | MS.gene072537 | 0.924161 | 1.02E-89 | -1.69E-46 |
| MS.gene050730 | MS.gene072539 | 0.927907 | 6.10E-92 | -1.69E-46 |
| MS.gene050730 | MS.gene22800 | 0.899785 | 1.40E-77 | -1.69E-46 |
| MS.gene050730 | MS.gene27401 | 0.802649 | 5.07E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050730.t1 | MTR_7g112430 | 93.660 | 347 | 5 | 1 | 1 | 330 | 1 | 347 | 0.0 | 652 |
| MS.gene050730.t1 | MTR_1g083750 | 83.381 | 349 | 39 | 1 | 1 | 330 | 1 | 349 | 0.0 | 566 |
| MS.gene050730.t1 | MTR_1g110210 | 77.551 | 294 | 66 | 0 | 1 | 294 | 1 | 294 | 4.02e-169 | 473 |
| MS.gene050730.t1 | MTR_7g029240 | 65.826 | 357 | 90 | 6 | 1 | 329 | 1 | 353 | 1.64e-147 | 422 |
| MS.gene050730.t1 | MTR_1g083750 | 83.268 | 257 | 24 | 1 | 93 | 330 | 1 | 257 | 3.33e-142 | 405 |
| MS.gene050730.t1 | MTR_1g019760 | 65.836 | 281 | 96 | 0 | 14 | 294 | 11 | 291 | 2.97e-141 | 406 |
| MS.gene050730.t1 | MTR_1g019760 | 65.836 | 281 | 96 | 0 | 14 | 294 | 11 | 291 | 3.69e-140 | 404 |
| MS.gene050730.t1 | MTR_3g101540 | 66.078 | 283 | 94 | 1 | 14 | 294 | 10 | 292 | 5.32e-137 | 395 |
| MS.gene050730.t1 | MTR_3g101540 | 66.078 | 283 | 94 | 1 | 14 | 294 | 10 | 292 | 9.20e-137 | 395 |
| MS.gene050730.t1 | MTR_1g014640 | 33.588 | 262 | 146 | 11 | 57 | 312 | 97 | 336 | 3.27e-31 | 120 |
| MS.gene050730.t1 | MTR_1g013400 | 33.588 | 262 | 146 | 11 | 57 | 312 | 97 | 336 | 3.27e-31 | 120 |
| MS.gene050730.t1 | MTR_3g105730 | 32.576 | 264 | 149 | 11 | 57 | 314 | 32 | 272 | 2.78e-30 | 116 |
| MS.gene050730.t1 | MTR_3g105730 | 32.075 | 265 | 149 | 11 | 57 | 314 | 54 | 294 | 5.18e-30 | 116 |
| MS.gene050730.t1 | MTR_3g464650 | 30.333 | 300 | 169 | 14 | 5 | 294 | 42 | 311 | 1.65e-27 | 110 |
| MS.gene050730.t1 | MTR_3g464700 | 32.456 | 228 | 134 | 8 | 33 | 260 | 88 | 295 | 1.21e-26 | 107 |
| MS.gene050730.t1 | MTR_1g115570 | 31.868 | 273 | 155 | 13 | 25 | 294 | 90 | 334 | 7.79e-26 | 105 |
| MS.gene050730.t1 | MTR_5g071550 | 31.818 | 242 | 140 | 10 | 60 | 294 | 148 | 371 | 6.35e-25 | 103 |
| MS.gene050730.t1 | MTR_8g463130 | 33.190 | 232 | 131 | 10 | 68 | 294 | 66 | 278 | 5.88e-24 | 99.8 |
| MS.gene050730.t1 | MTR_8g463130 | 33.190 | 232 | 131 | 10 | 68 | 294 | 38 | 250 | 7.42e-24 | 98.6 |
| MS.gene050730.t1 | MTR_2g078760 | 31.760 | 233 | 136 | 9 | 68 | 295 | 38 | 252 | 3.67e-23 | 96.7 |
| MS.gene050730.t1 | MTR_2g078760 | 31.760 | 233 | 136 | 9 | 68 | 295 | 117 | 331 | 6.09e-23 | 97.8 |
| MS.gene050730.t1 | MTR_4g125810 | 32.850 | 207 | 118 | 7 | 62 | 260 | 249 | 442 | 5.34e-22 | 96.7 |
| MS.gene050730.t1 | MTR_5g071550 | 31.633 | 196 | 117 | 7 | 60 | 255 | 148 | 326 | 5.78e-21 | 92.4 |
| MS.gene050730.t1 | MTR_2g008850 | 29.310 | 232 | 140 | 9 | 68 | 294 | 19 | 231 | 1.97e-20 | 89.0 |
| MS.gene050730.t1 | MTR_3g091060 | 29.921 | 254 | 149 | 10 | 46 | 294 | 108 | 337 | 4.04e-20 | 90.1 |
| MS.gene050730.t1 | MTR_2g008850 | 28.879 | 232 | 141 | 8 | 68 | 294 | 65 | 277 | 1.92e-19 | 87.0 |
| MS.gene050730.t1 | MTR_4g094208 | 30.172 | 232 | 138 | 9 | 68 | 294 | 61 | 273 | 2.50e-19 | 86.7 |
| MS.gene050730.t1 | MTR_2g078760 | 33.333 | 189 | 104 | 8 | 68 | 252 | 117 | 287 | 3.15e-19 | 86.7 |
| MS.gene050730.t1 | MTR_5g009370 | 29.412 | 238 | 138 | 8 | 66 | 295 | 85 | 300 | 5.13e-19 | 86.7 |
| MS.gene050730.t1 | MTR_3g074610 | 29.741 | 232 | 139 | 8 | 68 | 294 | 66 | 278 | 9.79e-19 | 85.1 |
| MS.gene050730.t1 | MTR_1g050520 | 31.120 | 241 | 133 | 7 | 69 | 294 | 419 | 641 | 1.14e-18 | 87.4 |
| MS.gene050730.t1 | MTR_5g063940 | 30.603 | 232 | 137 | 8 | 68 | 294 | 19 | 231 | 1.29e-18 | 84.0 |
| MS.gene050730.t1 | MTR_5g063940 | 30.603 | 232 | 137 | 8 | 68 | 294 | 66 | 278 | 2.90e-18 | 84.0 |
| MS.gene050730.t1 | MTR_4g094542 | 32.051 | 234 | 130 | 10 | 68 | 294 | 150 | 361 | 3.30e-18 | 84.7 |
| MS.gene050730.t1 | MTR_8g102550 | 30.412 | 194 | 120 | 6 | 69 | 258 | 153 | 335 | 3.65e-18 | 85.1 |
| MS.gene050730.t1 | MTR_6g081850 | 29.930 | 284 | 150 | 12 | 40 | 294 | 52 | 315 | 1.31e-17 | 82.4 |
| MS.gene050730.t1 | MTR_4g123080 | 31.489 | 235 | 126 | 10 | 67 | 282 | 94 | 312 | 1.53e-17 | 82.8 |
| MS.gene050730.t1 | MTR_4g123080 | 31.489 | 235 | 126 | 10 | 67 | 282 | 112 | 330 | 1.85e-17 | 82.8 |
| MS.gene050730.t1 | MTR_2g040500 | 28.000 | 275 | 146 | 9 | 32 | 265 | 219 | 482 | 3.87e-17 | 82.4 |
| MS.gene050730.t1 | MTR_1g086350 | 29.839 | 248 | 139 | 10 | 66 | 294 | 14 | 245 | 4.01e-17 | 80.5 |
| MS.gene050730.t1 | MTR_3g104710 | 29.323 | 266 | 132 | 9 | 69 | 294 | 287 | 536 | 8.23e-17 | 81.6 |
| MS.gene050730.t1 | MTR_3g068200 | 30.047 | 213 | 117 | 6 | 66 | 261 | 121 | 318 | 1.32e-16 | 80.5 |
| MS.gene050730.t1 | MTR_2g033000 | 31.092 | 238 | 129 | 10 | 64 | 282 | 96 | 317 | 1.47e-16 | 80.1 |
| MS.gene050730.t1 | MTR_1g086350 | 29.960 | 247 | 138 | 10 | 67 | 294 | 101 | 331 | 1.55e-16 | 80.1 |
| MS.gene050730.t1 | MTR_1g086350 | 29.960 | 247 | 138 | 10 | 67 | 294 | 117 | 347 | 1.57e-16 | 80.1 |
| MS.gene050730.t1 | MTR_1g015110 | 29.323 | 266 | 132 | 10 | 69 | 294 | 291 | 540 | 2.10e-16 | 80.5 |
| MS.gene050730.t1 | MTR_4g116420 | 30.556 | 252 | 128 | 11 | 65 | 294 | 121 | 347 | 2.90e-16 | 79.3 |
| MS.gene050730.t1 | MTR_5g024340 | 27.362 | 307 | 167 | 14 | 16 | 294 | 64 | 342 | 3.53e-16 | 79.0 |
| MS.gene050730.t1 | MTR_7g112490 | 34.375 | 192 | 99 | 11 | 131 | 301 | 200 | 385 | 7.44e-16 | 78.2 |
| MS.gene050730.t1 | MTR_7g112490 | 34.375 | 192 | 99 | 11 | 131 | 301 | 182 | 367 | 8.23e-16 | 77.8 |
| MS.gene050730.t1 | MTR_6g087000 | 27.647 | 340 | 180 | 18 | 4 | 296 | 60 | 380 | 3.97e-15 | 76.6 |
| MS.gene050730.t1 | MTR_6g087000 | 27.647 | 340 | 180 | 18 | 4 | 296 | 60 | 380 | 5.57e-15 | 76.3 |
| MS.gene050730.t1 | MTR_7g021530 | 28.904 | 301 | 174 | 13 | 41 | 320 | 52 | 333 | 9.82e-15 | 74.7 |
| MS.gene050730.t1 | MTR_7g021530 | 28.904 | 301 | 174 | 13 | 41 | 320 | 102 | 383 | 2.03e-14 | 73.9 |
| MS.gene050730.t1 | MTR_7g021530 | 28.904 | 301 | 174 | 13 | 41 | 320 | 143 | 424 | 2.30e-14 | 73.9 |
| MS.gene050730.t1 | MTR_5g080680 | 28.641 | 206 | 121 | 7 | 69 | 261 | 133 | 325 | 4.45e-14 | 72.8 |
| MS.gene050730.t1 | MTR_2g020970 | 29.021 | 286 | 155 | 14 | 43 | 294 | 67 | 338 | 8.54e-14 | 71.6 |
| MS.gene050730.t1 | MTR_2g020970 | 29.021 | 286 | 155 | 14 | 43 | 294 | 67 | 338 | 1.65e-13 | 71.2 |
| MS.gene050730.t1 | MTR_4g118340 | 33.202 | 253 | 124 | 15 | 41 | 261 | 64 | 303 | 1.89e-13 | 70.9 |
| MS.gene050730.t1 | MTR_3g107880 | 29.388 | 245 | 125 | 10 | 61 | 284 | 115 | 332 | 4.22e-13 | 69.7 |
| MS.gene050730.t1 | MTR_3g107880 | 29.388 | 245 | 125 | 10 | 61 | 284 | 58 | 275 | 4.27e-13 | 69.3 |
| MS.gene050730.t1 | MTR_3g107880 | 29.388 | 245 | 125 | 10 | 61 | 284 | 116 | 333 | 4.78e-13 | 69.7 |
| MS.gene050730.t1 | MTR_8g017240 | 30.769 | 221 | 117 | 12 | 99 | 297 | 135 | 341 | 8.34e-13 | 68.9 |
| MS.gene050730.t1 | MTR_3g105730 | 31.884 | 138 | 81 | 5 | 57 | 190 | 54 | 182 | 8.88e-13 | 67.0 |
| MS.gene050730.t1 | MTR_1g014190 | 27.799 | 259 | 116 | 11 | 54 | 257 | 76 | 318 | 1.12e-12 | 68.6 |
| MS.gene050730.t1 | MTR_1g014190 | 25.869 | 259 | 121 | 10 | 54 | 257 | 38 | 280 | 1.16e-12 | 68.6 |
| MS.gene050730.t1 | MTR_1g028300 | 31.658 | 199 | 121 | 6 | 69 | 265 | 146 | 331 | 4.81e-12 | 66.6 |
| MS.gene050730.t1 | MTR_4g007440 | 32.624 | 141 | 68 | 5 | 128 | 257 | 156 | 280 | 8.64e-12 | 65.9 |
| MS.gene050730.t1 | MTR_3g105880 | 31.206 | 141 | 70 | 5 | 128 | 257 | 156 | 280 | 1.11e-11 | 65.5 |
| MS.gene050730.t1 | MTR_3g105880 | 31.206 | 141 | 70 | 5 | 128 | 257 | 156 | 280 | 1.64e-11 | 64.7 |
| MS.gene050730.t1 | MTR_2g078760 | 35.385 | 130 | 69 | 7 | 68 | 193 | 117 | 235 | 1.70e-11 | 63.9 |
| MS.gene050730.t1 | MTR_4g037470 | 29.688 | 192 | 119 | 7 | 131 | 311 | 201 | 387 | 9.25e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050730.t1 | AT1G09160 | 77.233 | 347 | 62 | 1 | 1 | 330 | 1 | 347 | 0.0 | 541 |
| MS.gene050730.t1 | AT1G09160 | 77.233 | 347 | 62 | 1 | 1 | 330 | 1 | 347 | 0.0 | 541 |
| MS.gene050730.t1 | AT1G68410 | 71.131 | 336 | 77 | 3 | 14 | 330 | 19 | 353 | 2.33e-168 | 476 |
| MS.gene050730.t1 | AT1G68410 | 71.131 | 336 | 77 | 3 | 14 | 330 | 19 | 353 | 2.33e-168 | 476 |
| MS.gene050730.t1 | AT1G68410 | 71.131 | 336 | 77 | 3 | 14 | 330 | 19 | 353 | 2.33e-168 | 476 |
| MS.gene050730.t1 | AT1G68410 | 71.131 | 336 | 77 | 3 | 14 | 330 | 19 | 353 | 2.33e-168 | 476 |
| MS.gene050730.t1 | AT1G47380 | 60.119 | 336 | 114 | 2 | 14 | 330 | 10 | 344 | 1.31e-141 | 407 |
| MS.gene050730.t1 | AT2G34740 | 35.470 | 234 | 127 | 9 | 66 | 294 | 117 | 331 | 1.53e-29 | 115 |
| MS.gene050730.t1 | AT1G07160 | 32.482 | 274 | 150 | 12 | 33 | 294 | 123 | 373 | 2.99e-28 | 113 |
| MS.gene050730.t1 | AT4G31750 | 32.787 | 244 | 138 | 9 | 57 | 294 | 53 | 276 | 1.37e-27 | 110 |
| MS.gene050730.t1 | AT4G31750 | 32.787 | 244 | 138 | 9 | 57 | 294 | 53 | 276 | 1.37e-27 | 110 |
| MS.gene050730.t1 | AT4G31750 | 32.787 | 244 | 138 | 9 | 57 | 294 | 53 | 276 | 1.41e-27 | 110 |
| MS.gene050730.t1 | AT5G10740 | 32.319 | 263 | 145 | 10 | 39 | 294 | 40 | 276 | 2.02e-27 | 110 |
| MS.gene050730.t1 | AT5G10740 | 32.319 | 263 | 145 | 10 | 39 | 294 | 40 | 276 | 2.02e-27 | 110 |
| MS.gene050730.t1 | AT5G24940 | 32.319 | 263 | 145 | 11 | 39 | 294 | 40 | 276 | 2.16e-26 | 108 |
| MS.gene050730.t1 | AT1G78200 | 34.043 | 235 | 128 | 10 | 68 | 294 | 19 | 234 | 4.09e-26 | 104 |
| MS.gene050730.t1 | AT1G78200 | 34.043 | 235 | 128 | 10 | 68 | 294 | 19 | 234 | 4.09e-26 | 104 |
| MS.gene050730.t1 | AT1G43900 | 32.721 | 272 | 146 | 14 | 34 | 294 | 120 | 365 | 1.09e-25 | 105 |
| MS.gene050730.t1 | AT1G78200 | 34.043 | 235 | 128 | 10 | 68 | 294 | 64 | 279 | 1.58e-25 | 103 |
| MS.gene050730.t1 | AT1G78200 | 34.043 | 235 | 128 | 10 | 68 | 294 | 64 | 279 | 1.58e-25 | 103 |
| MS.gene050730.t1 | AT1G78200 | 34.043 | 235 | 128 | 10 | 68 | 294 | 64 | 279 | 1.58e-25 | 103 |
| MS.gene050730.t1 | AT1G22280 | 31.034 | 232 | 142 | 7 | 68 | 294 | 65 | 283 | 3.55e-25 | 103 |
| MS.gene050730.t1 | AT4G26080 | 33.810 | 210 | 123 | 6 | 61 | 265 | 165 | 363 | 3.56e-25 | 105 |
| MS.gene050730.t1 | AT4G28400 | 31.466 | 232 | 135 | 8 | 68 | 294 | 45 | 257 | 1.61e-24 | 100 |
| MS.gene050730.t1 | AT1G67820 | 31.646 | 237 | 137 | 10 | 34 | 263 | 78 | 296 | 2.08e-24 | 102 |
| MS.gene050730.t1 | AT5G53140 | 31.765 | 255 | 143 | 12 | 46 | 294 | 115 | 344 | 2.34e-24 | 102 |
| MS.gene050730.t1 | AT5G53140 | 31.765 | 255 | 143 | 12 | 46 | 294 | 115 | 344 | 2.34e-24 | 102 |
| MS.gene050730.t1 | AT2G20630 | 30.337 | 267 | 154 | 12 | 33 | 294 | 36 | 275 | 2.59e-24 | 100 |
| MS.gene050730.t1 | AT4G28400 | 31.466 | 232 | 135 | 8 | 68 | 294 | 67 | 279 | 3.34e-24 | 100 |
| MS.gene050730.t1 | AT1G67820 | 31.646 | 237 | 137 | 10 | 34 | 263 | 114 | 332 | 3.80e-24 | 102 |
| MS.gene050730.t1 | AT2G20630 | 30.337 | 267 | 154 | 12 | 33 | 294 | 36 | 275 | 3.90e-24 | 100 |
| MS.gene050730.t1 | AT5G57050 | 32.195 | 205 | 121 | 6 | 61 | 258 | 113 | 306 | 6.69e-24 | 101 |
| MS.gene050730.t1 | AT5G57050 | 32.195 | 205 | 121 | 6 | 61 | 258 | 153 | 346 | 1.30e-23 | 100 |
| MS.gene050730.t1 | AT1G34750 | 30.627 | 271 | 153 | 11 | 34 | 294 | 33 | 278 | 2.21e-23 | 98.2 |
| MS.gene050730.t1 | AT1G34750 | 30.627 | 271 | 153 | 11 | 34 | 294 | 33 | 278 | 2.21e-23 | 98.2 |
| MS.gene050730.t1 | AT1G34750 | 30.627 | 271 | 153 | 11 | 34 | 294 | 33 | 278 | 2.21e-23 | 98.2 |
| MS.gene050730.t1 | AT1G22280 | 31.034 | 232 | 136 | 8 | 68 | 294 | 65 | 277 | 2.79e-23 | 97.8 |
| MS.gene050730.t1 | AT2G30020 | 31.008 | 258 | 148 | 12 | 46 | 294 | 153 | 389 | 3.39e-23 | 99.4 |
| MS.gene050730.t1 | AT2G40180 | 29.915 | 234 | 147 | 7 | 67 | 294 | 160 | 382 | 3.16e-22 | 96.7 |
| MS.gene050730.t1 | AT2G34740 | 32.353 | 204 | 113 | 7 | 66 | 266 | 113 | 294 | 3.29e-21 | 92.4 |
| MS.gene050730.t1 | AT2G34740 | 32.353 | 204 | 113 | 7 | 66 | 266 | 131 | 312 | 3.49e-21 | 92.8 |
| MS.gene050730.t1 | AT3G15260 | 30.472 | 233 | 139 | 8 | 68 | 295 | 73 | 287 | 2.50e-19 | 87.0 |
| MS.gene050730.t1 | AT3G15260 | 30.472 | 233 | 139 | 8 | 68 | 295 | 73 | 287 | 2.50e-19 | 87.0 |
| MS.gene050730.t1 | AT2G40860 | 29.455 | 275 | 153 | 9 | 36 | 294 | 396 | 645 | 3.02e-19 | 89.0 |
| MS.gene050730.t1 | AT2G40860 | 29.455 | 275 | 153 | 9 | 36 | 294 | 298 | 547 | 3.47e-19 | 88.6 |
| MS.gene050730.t1 | AT2G40860 | 29.958 | 237 | 128 | 7 | 36 | 258 | 396 | 608 | 1.08e-18 | 87.4 |
| MS.gene050730.t1 | AT3G51470 | 28.044 | 271 | 153 | 11 | 40 | 294 | 36 | 280 | 7.14e-17 | 80.5 |
| MS.gene050730.t1 | AT3G51470 | 27.636 | 275 | 157 | 11 | 36 | 294 | 76 | 324 | 8.23e-17 | 80.9 |
| MS.gene050730.t1 | AT1G34750 | 28.571 | 238 | 136 | 10 | 34 | 262 | 33 | 245 | 9.30e-17 | 79.0 |
| MS.gene050730.t1 | AT4G28400 | 30.159 | 189 | 110 | 6 | 68 | 252 | 67 | 237 | 1.27e-16 | 78.6 |
| MS.gene050730.t1 | AT3G62260 | 29.675 | 246 | 140 | 12 | 67 | 294 | 26 | 256 | 1.65e-16 | 79.0 |
| MS.gene050730.t1 | AT3G62260 | 29.675 | 246 | 140 | 12 | 67 | 294 | 115 | 345 | 3.35e-16 | 79.0 |
| MS.gene050730.t1 | AT3G62260 | 29.675 | 246 | 140 | 12 | 67 | 294 | 116 | 346 | 3.40e-16 | 79.0 |
| MS.gene050730.t1 | AT2G25620 | 29.134 | 254 | 127 | 11 | 67 | 294 | 127 | 353 | 3.66e-16 | 79.0 |
| MS.gene050730.t1 | AT2G25620 | 29.134 | 254 | 127 | 11 | 67 | 294 | 127 | 353 | 3.66e-16 | 79.0 |
| MS.gene050730.t1 | AT5G59220 | 28.436 | 211 | 125 | 7 | 63 | 261 | 143 | 339 | 5.46e-16 | 78.6 |
| MS.gene050730.t1 | AT1G18030 | 28.740 | 254 | 135 | 10 | 69 | 294 | 110 | 345 | 1.01e-15 | 77.4 |
| MS.gene050730.t1 | AT2G33700 | 27.016 | 248 | 141 | 9 | 63 | 294 | 118 | 341 | 8.08e-15 | 75.1 |
| MS.gene050730.t1 | AT1G07430 | 28.311 | 219 | 124 | 7 | 64 | 265 | 153 | 355 | 9.77e-15 | 75.1 |
| MS.gene050730.t1 | AT1G17550 | 25.413 | 303 | 159 | 9 | 59 | 321 | 228 | 503 | 1.96e-14 | 74.3 |
| MS.gene050730.t1 | AT1G17550 | 25.413 | 303 | 159 | 9 | 59 | 321 | 228 | 503 | 1.96e-14 | 74.3 |
| MS.gene050730.t1 | AT5G26010 | 28.502 | 207 | 124 | 10 | 71 | 258 | 76 | 277 | 2.53e-13 | 70.1 |
| MS.gene050730.t1 | AT3G11410 | 27.064 | 218 | 118 | 7 | 69 | 261 | 138 | 339 | 5.45e-13 | 69.7 |
| MS.gene050730.t1 | AT2G40860 | 29.536 | 237 | 126 | 8 | 36 | 255 | 396 | 608 | 5.55e-13 | 70.1 |
| MS.gene050730.t1 | AT1G72770 | 25.088 | 283 | 144 | 9 | 69 | 311 | 239 | 493 | 7.09e-13 | 69.7 |
| MS.gene050730.t1 | AT1G72770 | 25.088 | 283 | 144 | 9 | 69 | 311 | 239 | 493 | 7.09e-13 | 69.7 |
| MS.gene050730.t1 | AT1G72770 | 25.088 | 283 | 144 | 9 | 69 | 311 | 239 | 493 | 7.09e-13 | 69.7 |
| MS.gene050730.t1 | AT2G20050 | 27.852 | 298 | 153 | 16 | 40 | 296 | 120 | 396 | 7.73e-13 | 70.1 |
| MS.gene050730.t1 | AT2G20050 | 27.852 | 298 | 153 | 16 | 40 | 296 | 120 | 396 | 8.45e-13 | 69.7 |
| MS.gene050730.t1 | AT3G17250 | 28.033 | 239 | 133 | 11 | 67 | 282 | 157 | 379 | 9.16e-13 | 68.9 |
| MS.gene050730.t1 | AT5G27930 | 33.125 | 160 | 90 | 7 | 103 | 251 | 148 | 301 | 4.02e-12 | 66.6 |
| MS.gene050730.t1 | AT4G32950 | 28.125 | 224 | 141 | 7 | 71 | 280 | 75 | 292 | 4.33e-12 | 66.6 |
| MS.gene050730.t1 | AT1G18030 | 29.327 | 208 | 106 | 9 | 69 | 253 | 110 | 299 | 6.15e-12 | 65.9 |
| MS.gene050730.t1 | AT5G51760 | 23.432 | 303 | 186 | 9 | 40 | 311 | 86 | 373 | 6.75e-12 | 66.2 |
| MS.gene050730.t1 | AT5G51760 | 23.432 | 303 | 186 | 9 | 40 | 311 | 116 | 403 | 1.14e-11 | 65.9 |
| MS.gene050730.t1 | AT2G29380 | 23.977 | 342 | 197 | 14 | 2 | 313 | 46 | 354 | 1.31e-11 | 65.5 |
| MS.gene050730.t1 | AT1G16220 | 26.471 | 238 | 141 | 7 | 84 | 291 | 131 | 364 | 1.37e-11 | 65.9 |
| MS.gene050730.t1 | AT4G27800 | 25.385 | 260 | 130 | 9 | 40 | 257 | 67 | 304 | 2.82e-11 | 64.3 |
| MS.gene050730.t1 | AT4G27800 | 25.385 | 260 | 130 | 9 | 40 | 257 | 67 | 304 | 3.82e-11 | 63.5 |
| MS.gene050730.t1 | AT1G79630 | 30.409 | 171 | 105 | 5 | 131 | 291 | 151 | 317 | 4.26e-11 | 63.9 |
| MS.gene050730.t1 | AT1G79630 | 30.409 | 171 | 105 | 5 | 131 | 291 | 151 | 317 | 4.26e-11 | 63.9 |
| MS.gene050730.t1 | AT4G27800 | 25.385 | 260 | 130 | 9 | 40 | 257 | 67 | 304 | 4.50e-11 | 63.9 |
| MS.gene050730.t1 | AT1G79630 | 30.994 | 171 | 104 | 6 | 131 | 291 | 111 | 277 | 4.93e-11 | 63.5 |
| MS.gene050730.t1 | AT1G79630 | 30.994 | 171 | 104 | 6 | 131 | 291 | 111 | 277 | 4.93e-11 | 63.5 |
| MS.gene050730.t1 | AT1G79630 | 30.994 | 171 | 104 | 6 | 131 | 291 | 111 | 277 | 4.93e-11 | 63.5 |
| MS.gene050730.t1 | AT1G79630 | 30.994 | 171 | 104 | 6 | 131 | 291 | 111 | 277 | 4.93e-11 | 63.5 |
| MS.gene050730.t1 | AT1G03590 | 30.769 | 208 | 127 | 8 | 131 | 326 | 184 | 386 | 7.66e-11 | 63.2 |
| MS.gene050730.t1 | AT1G79630 | 30.409 | 171 | 105 | 5 | 131 | 291 | 217 | 383 | 7.96e-11 | 63.5 |
| MS.gene050730.t1 | AT1G79630 | 30.409 | 171 | 105 | 5 | 131 | 291 | 221 | 387 | 9.09e-11 | 63.2 |
Find 100 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAGCCTCTGATGGTATT+TGG | 0.132240 | 7.2:-4438921 | MS.gene050730:CDS |
| AAAGTAATCTTCTCCTTTCT+TGG | 0.184037 | 7.2:+4440394 | None:intergenic |
| GTAGGACGACTCAATATATT+TGG | 0.216620 | 7.2:-4439274 | MS.gene050730:CDS |
| GCTACATTTGTTATAGTTGA+TGG | 0.263958 | 7.2:-4439439 | MS.gene050730:CDS |
| GGACACTTTATCTAATGATA+TGG | 0.286784 | 7.2:-4438899 | MS.gene050730:CDS |
| TCATACACAGGGGAAACTTC+TGG | 0.320861 | 7.2:-4439469 | MS.gene050730:intron |
| TATAGCCTCTGATGGTATTT+GGG | 0.324814 | 7.2:-4438920 | MS.gene050730:CDS |
| ATGCTAACCACACTGCTCTT+TGG | 0.336004 | 7.2:-4438623 | MS.gene050730:CDS |
| CTGTCACTGTTGCATCTGTT+GGG | 0.347808 | 7.2:-4439411 | MS.gene050730:CDS |
| ACAGATTGCCACAGGGTTCC+CGG | 0.349347 | 7.2:-4440362 | MS.gene050730:CDS |
| TTTCCTCAGCTTTCAAGTGC+TGG | 0.379190 | 7.2:-4438955 | MS.gene050730:intron |
| TAGGACGACTCAATATATTT+GGG | 0.381148 | 7.2:-4439273 | MS.gene050730:CDS |
| GTTCCATTGGCCACTTTGAT+TGG | 0.383557 | 7.2:-4440479 | MS.gene050730:CDS |
| CGATACCGCAAGATATCAAC+AGG | 0.387187 | 7.2:-4439635 | MS.gene050730:CDS |
| TGCTGCAAAGCTGGTGGTTA+AGG | 0.391611 | 7.2:-4438842 | MS.gene050730:intron |
| TGGAAGAGAATGTAGAAGAG+AGG | 0.399590 | 7.2:-4439324 | MS.gene050730:CDS |
| CTTCCTCGCGCTCTAGTTGT+TGG | 0.403102 | 7.2:-4439594 | MS.gene050730:CDS |
| GGCAGGTTGTATCATCCTTC+AGG | 0.404506 | 7.2:+4438709 | None:intergenic |
| ACTTGCTTAACATGTGGTAT+TGG | 0.408350 | 7.2:+4439082 | None:intergenic |
| AAGCTTGCTAGTGGCTTTGT+TGG | 0.414421 | 7.2:+4438580 | None:intergenic |
| TATGGCCGCCATGTCATGTC+GGG | 0.417110 | 7.2:-4438881 | MS.gene050730:CDS |
| TGCGGAGCTTGCTGCAAAGC+TGG | 0.418595 | 7.2:-4438851 | MS.gene050730:CDS |
| CAAGTTTGGACAAGCTGGAT+TGG | 0.419868 | 7.2:-4440417 | MS.gene050730:CDS |
| AAGACGGAAAACGCGGTTGA+TGG | 0.435385 | 7.2:+4440335 | None:intergenic |
| ATCAAAGTGGCCAATGGAAC+TGG | 0.436317 | 7.2:+4440482 | None:intergenic |
| CTGAGTATCTAATATGCAAC+GGG | 0.448005 | 7.2:+4439384 | None:intergenic |
| ACTGTCACTGTTGCATCTGT+TGG | 0.448709 | 7.2:-4439412 | MS.gene050730:CDS |
| TTTGTCAAGTTTGGACAAGC+TGG | 0.455005 | 7.2:-4440422 | MS.gene050730:CDS |
| TTGTGCCTATCTAGATCAAT+TGG | 0.456296 | 7.2:-4439133 | MS.gene050730:CDS |
| AGGTAGGTCCTCTTCGCTGC+TGG | 0.460279 | 7.2:-4439165 | MS.gene050730:CDS |
| CAGATTGCCACAGGGTTCCC+GGG | 0.464567 | 7.2:-4440361 | MS.gene050730:CDS |
| GCTTGTCCAAACTTGACAAA+AGG | 0.466330 | 7.2:+4440425 | None:intergenic |
| TGTCTCCAATTGATCTAGAT+AGG | 0.466362 | 7.2:+4439128 | None:intergenic |
| GGTCCTCTTCGCTGCTGGCC+CGG | 0.476949 | 7.2:-4439160 | MS.gene050730:CDS |
| AGCTTTCAAGTGCTGGTGGA+AGG | 0.479535 | 7.2:-4438948 | MS.gene050730:CDS |
| CAACAGGGATGCATGGCTAC+AGG | 0.481389 | 7.2:-4439619 | MS.gene050730:CDS |
| TAATCAAAACAGATTGCCAC+AGG | 0.485310 | 7.2:-4440370 | MS.gene050730:CDS |
| CCAGTCTATGATCAACTGTC+AGG | 0.485755 | 7.2:+4439344 | None:intergenic |
| CCGTTGCATATTAGATACTC+AGG | 0.487206 | 7.2:-4439383 | MS.gene050730:CDS |
| TCTAGATAGGCACAATCCAC+CGG | 0.487715 | 7.2:+4439141 | None:intergenic |
| AGCTTTGCAGCAAGCTCCGC+AGG | 0.489755 | 7.2:+4438853 | None:intergenic |
| CCTCAGCTTTCAAGTGCTGG+TGG | 0.495792 | 7.2:-4438952 | MS.gene050730:intron |
| TCGTCCTACTTCGCCACCAC+TGG | 0.499559 | 7.2:+4439288 | None:intergenic |
| AACGCGGTTGATGGATCCCC+GGG | 0.503812 | 7.2:+4440344 | None:intergenic |
| CAACAACTAGAGCGCGAGGA+AGG | 0.504666 | 7.2:+4439595 | None:intergenic |
| CATTTGTTATAGTTGATGGA+TGG | 0.506436 | 7.2:-4439435 | MS.gene050730:CDS |
| GAAGCCATCACCAGTTCCAT+TGG | 0.507591 | 7.2:-4440492 | MS.gene050730:CDS |
| ACTAGCAAGCTTTCTGCAGT+TGG | 0.512919 | 7.2:-4438569 | MS.gene050730:CDS |
| ACTGCCAGTGGTGGCGAAGT+AGG | 0.518277 | 7.2:-4439292 | MS.gene050730:CDS |
| CAAGCTGGATTGGCCAAGAA+AGG | 0.521862 | 7.2:-4440407 | MS.gene050730:CDS |
| GCTTTCTGCAGTTGGTGTTG+TGG | 0.524033 | 7.2:-4438561 | MS.gene050730:CDS |
| CCTGACAGTTGATCATAGAC+TGG | 0.530356 | 7.2:-4439344 | MS.gene050730:CDS |
| TGTCACTGTTGCATCTGTTG+GGG | 0.547608 | 7.2:-4439410 | MS.gene050730:CDS |
| TGACACGGAGTTTCAGAAGA+AGG | 0.553825 | 7.2:-4439559 | MS.gene050730:CDS |
| CGGCCAATCAAAGTGGCCAA+TGG | 0.555333 | 7.2:+4440476 | None:intergenic |
| AAACGCGGTTGATGGATCCC+CGG | 0.560628 | 7.2:+4440343 | None:intergenic |
| GAATATATCTACAACAAGGC+AGG | 0.562570 | 7.2:+4438692 | None:intergenic |
| GGAAGAGAATGTAGAAGAGA+GGG | 0.565211 | 7.2:-4439323 | MS.gene050730:CDS |
| TCAATTGGAGACACAGATGT+GGG | 0.570505 | 7.2:-4439118 | MS.gene050730:CDS |
| TCTAAGATCTAGAGGCCTGA+AGG | 0.576729 | 7.2:-4438724 | MS.gene050730:CDS |
| ACTTTCACTTGCTTAACATG+TGG | 0.580187 | 7.2:+4439076 | None:intergenic |
| CCACCGGGCCAGCAGCGAAG+AGG | 0.584691 | 7.2:+4439157 | None:intergenic |
| CCTCTTCGCTGCTGGCCCGG+TGG | 0.584827 | 7.2:-4439157 | MS.gene050730:CDS |
| AAGATATCAACAGGGATGCA+TGG | 0.585657 | 7.2:-4439626 | MS.gene050730:CDS |
| CTAGATAGGCACAATCCACC+GGG | 0.587266 | 7.2:+4439142 | None:intergenic |
| CCTGAGTATCTAATATGCAA+CGG | 0.590038 | 7.2:+4439383 | None:intergenic |
| GAGCGTGTTACTGCCAGTGG+TGG | 0.591453 | 7.2:-4439301 | MS.gene050730:CDS |
| TGAGTAAACGTGAATTGTCA+AGG | 0.591578 | 7.2:-4440517 | MS.gene050730:CDS |
| ATAAAGTAATACCGCAAAGA+CGG | 0.592761 | 7.2:+4440319 | None:intergenic |
| GCATCCCTGTTGATATCTTG+CGG | 0.595250 | 7.2:+4439630 | None:intergenic |
| ATCAATTGGAGACACAGATG+TGG | 0.598665 | 7.2:-4439119 | MS.gene050730:CDS |
| AGTGTCCCAAATACCATCAG+AGG | 0.599906 | 7.2:+4438915 | None:intergenic |
| GTGGCCAATGGAACTGGTGA+TGG | 0.600467 | 7.2:+4440488 | None:intergenic |
| CTTTCTCATTTCGAATCTCG+CGG | 0.603912 | 7.2:+4440456 | None:intergenic |
| TACCGCAAAGACGGAAAACG+CGG | 0.607314 | 7.2:+4440328 | None:intergenic |
| AGGTAGACCCCGACATGACA+TGG | 0.607364 | 7.2:+4438873 | None:intergenic |
| AGGCTTATTATAGCCTCTGA+TGG | 0.608901 | 7.2:-4438928 | MS.gene050730:CDS |
| AACAACTAGAGCGCGAGGAA+GGG | 0.608942 | 7.2:+4439596 | None:intergenic |
| ATATGGCCGCCATGTCATGT+CGG | 0.614370 | 7.2:-4438882 | MS.gene050730:CDS |
| CGTTGCATATTAGATACTCA+GGG | 0.617011 | 7.2:-4439382 | MS.gene050730:CDS |
| GTCATGTCGGGGTCTACCTG+CGG | 0.618990 | 7.2:-4438869 | MS.gene050730:CDS |
| AGGGAGCGTGTTACTGCCAG+TGG | 0.622185 | 7.2:-4439304 | MS.gene050730:CDS |
| AAACCAACAACTAGAGCGCG+AGG | 0.623767 | 7.2:+4439591 | None:intergenic |
| AGGACGACTCAATATATTTG+GGG | 0.625135 | 7.2:-4439272 | MS.gene050730:CDS |
| CAATTGGAGACACAGATGTG+GGG | 0.631303 | 7.2:-4439117 | MS.gene050730:CDS |
| CAGGAAGCTCTAAGATCTAG+AGG | 0.631425 | 7.2:-4438732 | MS.gene050730:CDS |
| AACTGCAGAAAGCTTGCTAG+TGG | 0.637588 | 7.2:+4438571 | None:intergenic |
| GGAGCTTGCTGCAAAGCTGG+TGG | 0.644503 | 7.2:-4438848 | MS.gene050730:CDS |
| AGATTGCCACAGGGTTCCCG+GGG | 0.645904 | 7.2:-4440360 | MS.gene050730:CDS |
| AATTGGAGACACAGATGTGG+GGG | 0.647919 | 7.2:-4439116 | MS.gene050730:CDS |
| GACACGGAGTTTCAGAAGAA+GGG | 0.648948 | 7.2:-4439558 | MS.gene050730:intron |
| ATGGCCGCCATGTCATGTCG+GGG | 0.652224 | 7.2:-4438880 | MS.gene050730:CDS |
| AATCTCGCGGCCAATCAAAG+TGG | 0.661716 | 7.2:+4440469 | None:intergenic |
| AATCAAAACAGATTGCCACA+GGG | 0.679930 | 7.2:-4440369 | MS.gene050730:CDS |
| ATGGATCCCCGGGAACCCTG+TGG | 0.685150 | 7.2:+4440354 | None:intergenic |
| GGACGACTCAATATATTTGG+GGG | 0.690993 | 7.2:-4439271 | MS.gene050730:CDS |
| TTTCTTTCCAAAGAGCAGTG+TGG | 0.711456 | 7.2:+4438616 | None:intergenic |
| TGCATATTAGATACTCAGGG+AGG | 0.745767 | 7.2:-4439379 | MS.gene050730:CDS |
| TAGACCCCGACATGACATGG+CGG | 0.769473 | 7.2:+4438876 | None:intergenic |
| GATACCGCAAGATATCAACA+GGG | 0.804220 | 7.2:-4439634 | MS.gene050730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTGAGTTTTAAGAAA+TGG | - | chr7.2:4438844-4438863 | MS.gene050730:CDS | 15.0% |
| !! | AGTAAATAAGCAAATCTAAA+CGG | + | chr7.2:4438964-4438983 | None:intergenic | 20.0% |
| ! | AAAGAACGTAATAATGAAAC+CGG | + | chr7.2:4440015-4440034 | None:intergenic | 25.0% |
| ! | AACTCAACTCAAATAACTAT+AGG | + | chr7.2:4438786-4438805 | None:intergenic | 25.0% |
| ! | ACATCTTAATTTCATACACA+GGG | - | chr7.2:4439582-4439601 | MS.gene050730:CDS | 25.0% |
| ! | ACATTTATAAGTAACAAGTG+GGG | - | chr7.2:4439276-4439295 | MS.gene050730:CDS | 25.0% |
| ! | AGAAGAATATATCTACAACA+AGG | + | chr7.2:4440377-4440396 | None:intergenic | 25.0% |
| ! | CACATTTATAAGTAACAAGT+GGG | - | chr7.2:4439275-4439294 | MS.gene050730:CDS | 25.0% |
| ! | TCACATTTATAAGTAACAAG+TGG | - | chr7.2:4439274-4439293 | MS.gene050730:CDS | 25.0% |
| ! | TTAAGTAACTGTTACTAGAA+GGG | + | chr7.2:4439844-4439863 | None:intergenic | 25.0% |
| ! | TTTAAGTAACTGTTACTAGA+AGG | + | chr7.2:4439845-4439864 | None:intergenic | 25.0% |
| !! | CATTATTACGTTCTTTTCTT+TGG | - | chr7.2:4440019-4440038 | MS.gene050730:intron | 25.0% |
| !! | GTTGATAAGGAATTCTTAAT+TGG | - | chr7.2:4439328-4439347 | MS.gene050730:CDS | 25.0% |
| !!! | TTATGCTTCTTTTTTGAAGT+AGG | + | chr7.2:4440418-4440437 | None:intergenic | 25.0% |
| AAAGTAATCTTCTCCTTTCT+TGG | + | chr7.2:4438671-4438690 | None:intergenic | 30.0% | |
| ATAAAGTAATACCGCAAAGA+CGG | + | chr7.2:4438746-4438765 | None:intergenic | 30.0% | |
| ATTAAGCTGAAAACAGCTTA+TGG | + | chr7.2:4439044-4439063 | None:intergenic | 30.0% | |
| CAATGGTTATGATGTTGATA+AGG | - | chr7.2:4439315-4439334 | MS.gene050730:CDS | 30.0% | |
| CATCTTAATTTCATACACAG+GGG | - | chr7.2:4439583-4439602 | MS.gene050730:CDS | 30.0% | |
| GACATCTTAATTTCATACAC+AGG | - | chr7.2:4439581-4439600 | MS.gene050730:CDS | 30.0% | |
| GAGATACATTTGTCTTTCTT+CGG | - | chr7.2:4438929-4438948 | MS.gene050730:CDS | 30.0% | |
| GGACACTTTATCTAATGATA+TGG | - | chr7.2:4440163-4440182 | MS.gene050730:intron | 30.0% | |
| GGGAGAAAAGAAAAGAAAAA+AGG | + | chr7.2:4440311-4440330 | None:intergenic | 30.0% | |
| TAGGACGACTCAATATATTT+GGG | - | chr7.2:4439789-4439808 | MS.gene050730:intron | 30.0% | |
| TGATTGTGAGAAATCTAACT+TGG | + | chr7.2:4440073-4440092 | None:intergenic | 30.0% | |
| TGCGGTATTACTTTATTCTT+TGG | - | chr7.2:4438750-4438769 | MS.gene050730:intron | 30.0% | |
| TTGTTCGCAAATATGTTTGT+AGG | - | chr7.2:4439877-4439896 | MS.gene050730:intron | 30.0% | |
| ! | AAAGTGCTTGTAAGCATTTA+GGG | + | chr7.2:4439183-4439202 | None:intergenic | 30.0% |
| ! | ATCAAGTTGTTTATCCAAAC+AGG | - | chr7.2:4439203-4439222 | MS.gene050730:intron | 30.0% |
| ! | ATTTGTCTTTCTTCGGTTTT+AGG | - | chr7.2:4438936-4438955 | MS.gene050730:CDS | 30.0% |
| ! | CTTAATTGGCAGATTTTTGA+CGG | - | chr7.2:4439342-4439361 | MS.gene050730:CDS | 30.0% |
| ! | GAAAAACCTTTTGTCAAGTT+TGG | - | chr7.2:4438631-4438650 | MS.gene050730:CDS | 30.0% |
| ! | TAAAGTGCTTGTAAGCATTT+AGG | + | chr7.2:4439184-4439203 | None:intergenic | 30.0% |
| ! | TTAATTGGCAGATTTTTGAC+GGG | - | chr7.2:4439343-4439362 | MS.gene050730:CDS | 30.0% |
| ! | TTTTTCTTTTCTTTTCTCCC+AGG | - | chr7.2:4440311-4440330 | MS.gene050730:intron | 30.0% |
| !! | AGACTGTTTGAGACATTTTA+TGG | - | chr7.2:4439000-4439019 | MS.gene050730:intron | 30.0% |
| !! | CATTTGTTATAGTTGATGGA+TGG | - | chr7.2:4439627-4439646 | MS.gene050730:CDS | 30.0% |
| !! | GCTACATTTGTTATAGTTGA+TGG | - | chr7.2:4439623-4439642 | MS.gene050730:CDS | 30.0% |
| AATCAAAACAGATTGCCACA+GGG | - | chr7.2:4438693-4438712 | MS.gene050730:intron | 35.0% | |
| ACTTGCTTAACATGTGGTAT+TGG | + | chr7.2:4439983-4440002 | None:intergenic | 35.0% | |
| ACTTTCACTTGCTTAACATG+TGG | + | chr7.2:4439989-4440008 | None:intergenic | 35.0% | |
| AGGACGACTCAATATATTTG+GGG | - | chr7.2:4439790-4439809 | MS.gene050730:intron | 35.0% | |
| ATCAACATCATAACCATTGC+AGG | + | chr7.2:4439314-4439333 | None:intergenic | 35.0% | |
| CCTGAGTATCTAATATGCAA+CGG | + | chr7.2:4439682-4439701 | None:intergenic | 35.0% | |
| CGTTGCATATTAGATACTCA+GGG | - | chr7.2:4439680-4439699 | MS.gene050730:CDS | 35.0% | |
| CTGAGTATCTAATATGCAAC+GGG | + | chr7.2:4439681-4439700 | None:intergenic | 35.0% | |
| GAATATATCTACAACAAGGC+AGG | + | chr7.2:4440373-4440392 | None:intergenic | 35.0% | |
| GCATCAATTTATTCCTGCAA+TGG | - | chr7.2:4439298-4439317 | MS.gene050730:CDS | 35.0% | |
| GTAGGACGACTCAATATATT+TGG | - | chr7.2:4439788-4439807 | MS.gene050730:intron | 35.0% | |
| TAATCAAAACAGATTGCCAC+AGG | - | chr7.2:4438692-4438711 | MS.gene050730:intron | 35.0% | |
| TATAGCCTCTGATGGTATTT+GGG | - | chr7.2:4440142-4440161 | MS.gene050730:intron | 35.0% | |
| TCGCAAATATGTTTGTAGGT+AGG | - | chr7.2:4439881-4439900 | MS.gene050730:intron | 35.0% | |
| TGAGTAAACGTGAATTGTCA+AGG | - | chr7.2:4438545-4438564 | MS.gene050730:CDS | 35.0% | |
| TGGAAGTTTATTCTGCATAG+TGG | - | chr7.2:4438900-4438919 | MS.gene050730:CDS | 35.0% | |
| TGTCTCCAATTGATCTAGAT+AGG | + | chr7.2:4439937-4439956 | None:intergenic | 35.0% | |
| TGTTACTAGAAGGGAAAAAG+TGG | + | chr7.2:4439835-4439854 | None:intergenic | 35.0% | |
| TTATAGCCTCTGATGGTATT+TGG | - | chr7.2:4440141-4440160 | MS.gene050730:intron | 35.0% | |
| TTGAAGTAGGTGGTAATACA+GGG | + | chr7.2:4440405-4440424 | None:intergenic | 35.0% | |
| TTGTGCCTATCTAGATCAAT+TGG | - | chr7.2:4439929-4439948 | MS.gene050730:intron | 35.0% | |
| ! | GACATTCTTCTCACATTTTC+TGG | - | chr7.2:4440254-4440273 | MS.gene050730:intron | 35.0% |
| ! | TTATTCTGCATAGTGGAGAA+TGG | - | chr7.2:4438907-4438926 | MS.gene050730:CDS | 35.0% |
| ! | TTTGAAGTAGGTGGTAATAC+AGG | + | chr7.2:4440406-4440425 | None:intergenic | 35.0% |
| !! | TCTTCTCACATTTTCTGGAA+TGG | - | chr7.2:4440259-4440278 | MS.gene050730:intron | 35.0% |
| !! | TCTTTGGTGTCTCTTATATG+TGG | - | chr7.2:4440035-4440054 | MS.gene050730:intron | 35.0% |
| !!! | CATTTTCTGGAATGGATGTT+TGG | - | chr7.2:4440267-4440286 | MS.gene050730:intron | 35.0% |
| !!! | TGCTTCTTTTTTGAAGTAGG+TGG | + | chr7.2:4440415-4440434 | None:intergenic | 35.0% |
| AAGATATCAACAGGGATGCA+TGG | - | chr7.2:4439436-4439455 | MS.gene050730:CDS | 40.0% | |
| AGGCTTATTATAGCCTCTGA+TGG | - | chr7.2:4440134-4440153 | MS.gene050730:intron | 40.0% | |
| ATCAATTGGAGACACAGATG+TGG | - | chr7.2:4439943-4439962 | MS.gene050730:intron | 40.0% | |
| ATCCATGAAGCAAGCAAACA+AGG | + | chr7.2:4439541-4439560 | None:intergenic | 40.0% | |
| CAATATATTTGGGGGCAATG+AGG | - | chr7.2:4439799-4439818 | MS.gene050730:intron | 40.0% | |
| CCGTTGCATATTAGATACTC+AGG | - | chr7.2:4439679-4439698 | MS.gene050730:CDS | 40.0% | |
| CTTTCTCATTTCGAATCTCG+CGG | + | chr7.2:4438609-4438628 | None:intergenic | 40.0% | |
| GACATCTACTAAGTCCTGTT+TGG | + | chr7.2:4439220-4439239 | None:intergenic | 40.0% | |
| GATACCGCAAGATATCAACA+GGG | - | chr7.2:4439428-4439447 | MS.gene050730:CDS | 40.0% | |
| GCTTGTCCAAACTTGACAAA+AGG | + | chr7.2:4438640-4438659 | None:intergenic | 40.0% | |
| GGAAGAGAATGTAGAAGAGA+GGG | - | chr7.2:4439739-4439758 | MS.gene050730:intron | 40.0% | |
| GGACGACTCAATATATTTGG+GGG | - | chr7.2:4439791-4439810 | MS.gene050730:intron | 40.0% | |
| GTTGAGAGTTGAGTATGAGT+TGG | - | chr7.2:4438880-4438899 | MS.gene050730:CDS | 40.0% | |
| TCAATTGGAGACACAGATGT+GGG | - | chr7.2:4439944-4439963 | MS.gene050730:intron | 40.0% | |
| TCTAGATCTTAGAGCTTCCT+GGG | + | chr7.2:4440331-4440350 | None:intergenic | 40.0% | |
| TGCATATTAGATACTCAGGG+AGG | - | chr7.2:4439683-4439702 | MS.gene050730:CDS | 40.0% | |
| TGGAAGAGAATGTAGAAGAG+AGG | - | chr7.2:4439738-4439757 | MS.gene050730:intron | 40.0% | |
| TTAAGCAAGTGAAAGTGAGC+CGG | - | chr7.2:4439993-4440012 | MS.gene050730:intron | 40.0% | |
| TTTCTTTCCAAAGAGCAGTG+TGG | + | chr7.2:4440449-4440468 | None:intergenic | 40.0% | |
| TTTGTCAAGTTTGGACAAGC+TGG | - | chr7.2:4438640-4438659 | MS.gene050730:intron | 40.0% | |
| !! | GCTGTTTTCATAAGCTAGCT+TGG | + | chr7.2:4439079-4439098 | None:intergenic | 40.0% |
| !! | TTGTGGAAGAGCTTTTGAAG+AGG | - | chr7.2:4440518-4440537 | MS.gene050730:CDS | 40.0% |
| !!! | TGGTTTTGTGAAGACTGACA+CGG | - | chr7.2:4439488-4439507 | MS.gene050730:intron | 40.0% |
| AAGTAGGTGGTAATACAGGG+TGG | + | chr7.2:4440402-4440421 | None:intergenic | 45.0% | |
| AATTGGAGACACAGATGTGG+GGG | - | chr7.2:4439946-4439965 | MS.gene050730:intron | 45.0% | |
| ACTAGCAAGCTTTCTGCAGT+TGG | - | chr7.2:4440493-4440512 | MS.gene050730:CDS | 45.0% | |
| ACTGTCACTGTTGCATCTGT+TGG | - | chr7.2:4439650-4439669 | MS.gene050730:CDS | 45.0% | |
| AGTGTCCCAAATACCATCAG+AGG | + | chr7.2:4440150-4440169 | None:intergenic | 45.0% | |
| ATCAAAGTGGCCAATGGAAC+TGG | + | chr7.2:4438583-4438602 | None:intergenic | 45.0% | |
| ATGCTAACCACACTGCTCTT+TGG | - | chr7.2:4440439-4440458 | MS.gene050730:CDS | 45.0% | |
| CAAGTTTGGACAAGCTGGAT+TGG | - | chr7.2:4438645-4438664 | MS.gene050730:intron | 45.0% | |
| CAATTGGAGACACAGATGTG+GGG | - | chr7.2:4439945-4439964 | MS.gene050730:intron | 45.0% | |
| CCAGTCTATGATCAACTGTC+AGG | + | chr7.2:4439721-4439740 | None:intergenic | 45.0% | |
| CCTGACAGTTGATCATAGAC+TGG | - | chr7.2:4439718-4439737 | MS.gene050730:intron | 45.0% | |
| CGATACCGCAAGATATCAAC+AGG | - | chr7.2:4439427-4439446 | MS.gene050730:CDS | 45.0% | |
| CTCTAGATCTTAGAGCTTCC+TGG | + | chr7.2:4440332-4440351 | None:intergenic | 45.0% | |
| CTGTCACTGTTGCATCTGTT+GGG | - | chr7.2:4439651-4439670 | MS.gene050730:CDS | 45.0% | |
| GACACGGAGTTTCAGAAGAA+GGG | - | chr7.2:4439504-4439523 | MS.gene050730:intron | 45.0% | |
| GCATCCCTGTTGATATCTTG+CGG | + | chr7.2:4439435-4439454 | None:intergenic | 45.0% | |
| TCATACACAGGGGAAACTTC+TGG | - | chr7.2:4439593-4439612 | MS.gene050730:CDS | 45.0% | |
| TCTAGATAGGCACAATCCAC+CGG | + | chr7.2:4439924-4439943 | None:intergenic | 45.0% | |
| TGACACGGAGTTTCAGAAGA+AGG | - | chr7.2:4439503-4439522 | MS.gene050730:intron | 45.0% | |
| TGTCACTGTTGCATCTGTTG+GGG | - | chr7.2:4439652-4439671 | MS.gene050730:CDS | 45.0% | |
| ! | GTTCCATTGGCCACTTTGAT+TGG | - | chr7.2:4438583-4438602 | MS.gene050730:CDS | 45.0% |
| ! | TCTAAGATCTAGAGGCCTGA+AGG | - | chr7.2:4440338-4440357 | MS.gene050730:CDS | 45.0% |
| ! | TTTCCTCAGCTTTCAAGTGC+TGG | - | chr7.2:4440107-4440126 | MS.gene050730:intron | 45.0% |
| !! | AACTGCAGAAAGCTTGCTAG+TGG | + | chr7.2:4440494-4440513 | None:intergenic | 45.0% |
| !! | AAGCTTGCTAGTGGCTTTGT+TGG | + | chr7.2:4440485-4440504 | None:intergenic | 45.0% |
| !! | AGCCTTGTTTGCTTGCTTCA+TGG | - | chr7.2:4439536-4439555 | MS.gene050730:intron | 45.0% |
| !! | CAGATTTTTGACGGGCACAA+CGG | - | chr7.2:4439351-4439370 | MS.gene050730:CDS | 45.0% |
| !! | CAGGAAGCTCTAAGATCTAG+AGG | - | chr7.2:4440330-4440349 | MS.gene050730:intron | 45.0% |
| AAACCAACAACTAGAGCGCG+AGG | + | chr7.2:4439474-4439493 | None:intergenic | 50.0% | |
| AACAACTAGAGCGCGAGGAA+GGG | + | chr7.2:4439469-4439488 | None:intergenic | 50.0% | |
| AAGACGGAAAACGCGGTTGA+TGG | + | chr7.2:4438730-4438749 | None:intergenic | 50.0% | |
| AATCTCGCGGCCAATCAAAG+TGG | + | chr7.2:4438596-4438615 | None:intergenic | 50.0% | |
| ATATGGCCGCCATGTCATGT+CGG | - | chr7.2:4440180-4440199 | MS.gene050730:intron | 50.0% | |
| CTAGATAGGCACAATCCACC+GGG | + | chr7.2:4439923-4439942 | None:intergenic | 50.0% | |
| GAAGCCATCACCAGTTCCAT+TGG | - | chr7.2:4438570-4438589 | MS.gene050730:CDS | 50.0% | |
| GGCAGGTTGTATCATCCTTC+AGG | + | chr7.2:4440356-4440375 | None:intergenic | 50.0% | |
| TACCGCAAAGACGGAAAACG+CGG | + | chr7.2:4438737-4438756 | None:intergenic | 50.0% | |
| TGCTGCAAAGCTGGTGGTTA+AGG | - | chr7.2:4440220-4440239 | MS.gene050730:intron | 50.0% | |
| ! | AACCGCGTTTTCCGTCTTTG+CGG | - | chr7.2:4438732-4438751 | MS.gene050730:CDS | 50.0% |
| !! | AGCTTTCAAGTGCTGGTGGA+AGG | - | chr7.2:4440114-4440133 | MS.gene050730:intron | 50.0% |
| !! | CAAGCTGGATTGGCCAAGAA+AGG | - | chr7.2:4438655-4438674 | MS.gene050730:intron | 50.0% |
| !! | GCTTTCTGCAGTTGGTGTTG+TGG | - | chr7.2:4440501-4440520 | MS.gene050730:CDS | 50.0% |
| ACAGATTGCCACAGGGTTCC+CGG | - | chr7.2:4438700-4438719 | MS.gene050730:intron | 55.0% | |
| AGGTAGACCCCGACATGACA+TGG | + | chr7.2:4440192-4440211 | None:intergenic | 55.0% | |
| CAACAACTAGAGCGCGAGGA+AGG | + | chr7.2:4439470-4439489 | None:intergenic | 55.0% | |
| CAACAGGGATGCATGGCTAC+AGG | - | chr7.2:4439443-4439462 | MS.gene050730:CDS | 55.0% | |
| CCACCAGCACTTGAAAGCTG+AGG | + | chr7.2:4440113-4440132 | None:intergenic | 55.0% | |
| CGGCCAATCAAAGTGGCCAA+TGG | + | chr7.2:4438589-4438608 | None:intergenic | 55.0% | |
| CTTCCTCGCGCTCTAGTTGT+TGG | - | chr7.2:4439468-4439487 | MS.gene050730:intron | 55.0% | |
| GTGGCCAATGGAACTGGTGA+TGG | + | chr7.2:4438577-4438596 | None:intergenic | 55.0% | |
| TAGACCCCGACATGACATGG+CGG | + | chr7.2:4440189-4440208 | None:intergenic | 55.0% | |
| TATGGCCGCCATGTCATGTC+GGG | - | chr7.2:4440181-4440200 | MS.gene050730:intron | 55.0% | |
| !! | AAACGCGGTTGATGGATCCC+CGG | + | chr7.2:4438722-4438741 | None:intergenic | 55.0% |
| !! | CCTCAGCTTTCAAGTGCTGG+TGG | - | chr7.2:4440110-4440129 | MS.gene050730:intron | 55.0% |
| AGATTGCCACAGGGTTCCCG+GGG | - | chr7.2:4438702-4438721 | MS.gene050730:intron | 60.0% | |
| AGCTTTGCAGCAAGCTCCGC+AGG | + | chr7.2:4440212-4440231 | None:intergenic | 60.0% | |
| AGGTAGGTCCTCTTCGCTGC+TGG | - | chr7.2:4439897-4439916 | MS.gene050730:intron | 60.0% | |
| ATGGCCGCCATGTCATGTCG+GGG | - | chr7.2:4440182-4440201 | MS.gene050730:intron | 60.0% | |
| CAGATTGCCACAGGGTTCCC+GGG | - | chr7.2:4438701-4438720 | MS.gene050730:intron | 60.0% | |
| GTCATGTCGGGGTCTACCTG+CGG | - | chr7.2:4440193-4440212 | MS.gene050730:intron | 60.0% | |
| TCGTCCTACTTCGCCACCAC+TGG | + | chr7.2:4439777-4439796 | None:intergenic | 60.0% | |
| ! | ACTGCCAGTGGTGGCGAAGT+AGG | - | chr7.2:4439770-4439789 | MS.gene050730:intron | 60.0% |
| ! | AGGGAGCGTGTTACTGCCAG+TGG | - | chr7.2:4439758-4439777 | MS.gene050730:intron | 60.0% |
| ! | GAGCGTGTTACTGCCAGTGG+TGG | - | chr7.2:4439761-4439780 | MS.gene050730:intron | 60.0% |
| !! | AACGCGGTTGATGGATCCCC+GGG | + | chr7.2:4438721-4438740 | None:intergenic | 60.0% |
| !! | GGAGCTTGCTGCAAAGCTGG+TGG | - | chr7.2:4440214-4440233 | MS.gene050730:intron | 60.0% |
| !! | TGCGGAGCTTGCTGCAAAGC+TGG | - | chr7.2:4440211-4440230 | MS.gene050730:intron | 60.0% |
| ATGGATCCCCGGGAACCCTG+TGG | + | chr7.2:4438711-4438730 | None:intergenic | 65.0% | |
| GGTCCTCTTCGCTGCTGGCC+CGG | - | chr7.2:4439902-4439921 | MS.gene050730:intron | 70.0% | |
| CCACCGGGCCAGCAGCGAAG+AGG | + | chr7.2:4439908-4439927 | None:intergenic | 75.0% | |
| CCTCTTCGCTGCTGGCCCGG+TGG | - | chr7.2:4439905-4439924 | MS.gene050730:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 4438544 | 4440540 | 4438544 | ID=MS.gene050730 |
| chr7.2 | mRNA | 4438544 | 4440540 | 4438544 | ID=MS.gene050730.t1;Parent=MS.gene050730 |
| chr7.2 | exon | 4440331 | 4440540 | 4440331 | ID=MS.gene050730.t1.exon1;Parent=MS.gene050730.t1 |
| chr7.2 | CDS | 4440331 | 4440540 | 4440331 | ID=cds.MS.gene050730.t1;Parent=MS.gene050730.t1 |
| chr7.2 | exon | 4439559 | 4439730 | 4439559 | ID=MS.gene050730.t1.exon2;Parent=MS.gene050730.t1 |
| chr7.2 | CDS | 4439559 | 4439730 | 4439559 | ID=cds.MS.gene050730.t1;Parent=MS.gene050730.t1 |
| chr7.2 | exon | 4439264 | 4439481 | 4439264 | ID=MS.gene050730.t1.exon3;Parent=MS.gene050730.t1 |
| chr7.2 | CDS | 4439264 | 4439481 | 4439264 | ID=cds.MS.gene050730.t1;Parent=MS.gene050730.t1 |
| chr7.2 | exon | 4439078 | 4439185 | 4439078 | ID=MS.gene050730.t1.exon4;Parent=MS.gene050730.t1 |
| chr7.2 | CDS | 4439078 | 4439185 | 4439078 | ID=cds.MS.gene050730.t1;Parent=MS.gene050730.t1 |
| chr7.2 | exon | 4438843 | 4438968 | 4438843 | ID=MS.gene050730.t1.exon5;Parent=MS.gene050730.t1 |
| chr7.2 | CDS | 4438843 | 4438968 | 4438843 | ID=cds.MS.gene050730.t1;Parent=MS.gene050730.t1 |
| chr7.2 | exon | 4438704 | 4438751 | 4438704 | ID=MS.gene050730.t1.exon6;Parent=MS.gene050730.t1 |
| chr7.2 | CDS | 4438704 | 4438751 | 4438704 | ID=cds.MS.gene050730.t1;Parent=MS.gene050730.t1 |
| chr7.2 | exon | 4438544 | 4438654 | 4438544 | ID=MS.gene050730.t1.exon7;Parent=MS.gene050730.t1 |
| chr7.2 | CDS | 4438544 | 4438654 | 4438544 | ID=cds.MS.gene050730.t1;Parent=MS.gene050730.t1 |
| Gene Sequence |
| Protein sequence |
