Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072539.t1 | XP_003626183.1 | 98.3 | 358 | 6 | 0 | 1 | 358 | 1 | 358 | 1.40E-197 | 698.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072539.t1 | O80492 | 79.9 | 358 | 72 | 0 | 1 | 358 | 1 | 358 | 2.2e-162 | 573.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072539.t1 | G7KWI9 | 98.3 | 358 | 6 | 0 | 1 | 358 | 1 | 358 | 1.0e-197 | 698.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050730 | MS.gene072539 | 0.927907 | 6.10E-92 | -1.69E-46 |
| MS.gene050733 | MS.gene072539 | 0.91546 | 5.73E-85 | -1.69E-46 |
| MS.gene050735 | MS.gene072539 | 0.878135 | 3.59E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074612 | MS.gene072539 | PPI |
| MS.gene072539 | MS.gene062780 | PPI |
| MS.gene072539 | MS.gene67109 | PPI |
| MS.gene054634 | MS.gene072539 | PPI |
| MS.gene072539 | MS.gene24384 | PPI |
| MS.gene044022 | MS.gene072539 | PPI |
| MS.gene072539 | MS.gene074613 | PPI |
| MS.gene012991 | MS.gene072539 | PPI |
| MS.gene072539 | MS.gene38723 | PPI |
| MS.gene072539 | MS.gene48493 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072539.t1 | MTR_7g112430 | 98.324 | 358 | 6 | 0 | 1 | 358 | 1 | 358 | 0.0 | 713 |
| MS.gene072539.t1 | MTR_1g083750 | 85.484 | 372 | 51 | 2 | 1 | 369 | 1 | 372 | 0.0 | 620 |
| MS.gene072539.t1 | MTR_1g110210 | 74.766 | 321 | 81 | 0 | 1 | 321 | 1 | 321 | 9.17e-177 | 494 |
| MS.gene072539.t1 | MTR_1g083750 | 86.071 | 280 | 36 | 2 | 93 | 369 | 1 | 280 | 3.47e-163 | 460 |
| MS.gene072539.t1 | MTR_7g029240 | 69.272 | 371 | 95 | 10 | 1 | 358 | 1 | 365 | 5.66e-161 | 458 |
| MS.gene072539.t1 | MTR_1g019760 | 61.095 | 347 | 133 | 2 | 14 | 359 | 11 | 356 | 9.72e-156 | 444 |
| MS.gene072539.t1 | MTR_1g019760 | 61.628 | 344 | 130 | 2 | 14 | 356 | 11 | 353 | 6.10e-154 | 440 |
| MS.gene072539.t1 | MTR_3g101540 | 60.857 | 350 | 128 | 3 | 14 | 357 | 10 | 356 | 1.97e-150 | 431 |
| MS.gene072539.t1 | MTR_3g101540 | 60.857 | 350 | 128 | 3 | 14 | 357 | 10 | 356 | 2.58e-150 | 431 |
| MS.gene072539.t1 | MTR_1g014640 | 33.730 | 252 | 141 | 10 | 57 | 302 | 97 | 328 | 4.80e-31 | 120 |
| MS.gene072539.t1 | MTR_1g013400 | 33.730 | 252 | 141 | 10 | 57 | 302 | 97 | 328 | 4.80e-31 | 120 |
| MS.gene072539.t1 | MTR_3g105730 | 33.468 | 248 | 139 | 10 | 57 | 298 | 32 | 259 | 9.70e-30 | 115 |
| MS.gene072539.t1 | MTR_3g105730 | 33.468 | 248 | 139 | 10 | 57 | 298 | 54 | 281 | 1.96e-29 | 115 |
| MS.gene072539.t1 | MTR_1g115570 | 32.155 | 283 | 159 | 14 | 25 | 304 | 90 | 342 | 2.13e-27 | 111 |
| MS.gene072539.t1 | MTR_3g464650 | 30.033 | 303 | 172 | 14 | 5 | 297 | 42 | 314 | 2.14e-27 | 110 |
| MS.gene072539.t1 | MTR_3g464700 | 30.970 | 268 | 152 | 11 | 6 | 260 | 48 | 295 | 2.19e-26 | 108 |
| MS.gene072539.t1 | MTR_5g071550 | 31.429 | 245 | 143 | 10 | 60 | 297 | 148 | 374 | 3.01e-25 | 105 |
| MS.gene072539.t1 | MTR_8g463130 | 33.476 | 233 | 131 | 10 | 68 | 295 | 38 | 251 | 3.65e-24 | 100 |
| MS.gene072539.t1 | MTR_8g463130 | 33.476 | 233 | 131 | 10 | 68 | 295 | 66 | 279 | 3.82e-24 | 100 |
| MS.gene072539.t1 | MTR_2g078760 | 32.340 | 235 | 135 | 10 | 68 | 297 | 38 | 253 | 2.55e-23 | 97.8 |
| MS.gene072539.t1 | MTR_2g078760 | 32.340 | 235 | 135 | 10 | 68 | 297 | 117 | 332 | 4.26e-23 | 99.0 |
| MS.gene072539.t1 | MTR_4g125810 | 29.740 | 269 | 142 | 9 | 62 | 297 | 249 | 503 | 5.99e-22 | 97.4 |
| MS.gene072539.t1 | MTR_5g071550 | 31.633 | 196 | 117 | 7 | 60 | 255 | 148 | 326 | 6.80e-21 | 93.2 |
| MS.gene072539.t1 | MTR_2g008850 | 29.614 | 233 | 140 | 9 | 68 | 295 | 19 | 232 | 9.74e-21 | 90.5 |
| MS.gene072539.t1 | MTR_3g091060 | 30.196 | 255 | 149 | 10 | 46 | 295 | 108 | 338 | 1.74e-20 | 92.0 |
| MS.gene072539.t1 | MTR_2g008850 | 29.185 | 233 | 141 | 8 | 68 | 295 | 65 | 278 | 8.60e-20 | 88.6 |
| MS.gene072539.t1 | MTR_4g094208 | 30.472 | 233 | 138 | 9 | 68 | 295 | 61 | 274 | 9.14e-20 | 88.6 |
| MS.gene072539.t1 | MTR_1g050520 | 31.301 | 246 | 136 | 7 | 69 | 299 | 419 | 646 | 1.31e-19 | 90.9 |
| MS.gene072539.t1 | MTR_3g074610 | 29.614 | 233 | 140 | 7 | 68 | 295 | 66 | 279 | 4.75e-19 | 86.7 |
| MS.gene072539.t1 | MTR_5g063940 | 30.901 | 233 | 137 | 8 | 68 | 295 | 19 | 232 | 7.09e-19 | 85.1 |
| MS.gene072539.t1 | MTR_2g078760 | 33.333 | 189 | 104 | 8 | 68 | 252 | 117 | 287 | 7.19e-19 | 86.3 |
| MS.gene072539.t1 | MTR_1g086350 | 30.000 | 270 | 149 | 12 | 66 | 312 | 14 | 266 | 1.07e-18 | 85.9 |
| MS.gene072539.t1 | MTR_5g009370 | 32.178 | 202 | 116 | 7 | 66 | 259 | 85 | 273 | 1.35e-18 | 86.3 |
| MS.gene072539.t1 | MTR_5g063940 | 30.472 | 233 | 138 | 7 | 68 | 295 | 66 | 279 | 1.67e-18 | 85.1 |
| MS.gene072539.t1 | MTR_4g094542 | 32.068 | 237 | 132 | 10 | 66 | 295 | 148 | 362 | 1.71e-18 | 86.3 |
| MS.gene072539.t1 | MTR_4g123080 | 30.952 | 252 | 138 | 11 | 67 | 299 | 112 | 346 | 3.74e-18 | 85.5 |
| MS.gene072539.t1 | MTR_4g123080 | 30.075 | 266 | 148 | 12 | 67 | 311 | 94 | 342 | 3.80e-18 | 85.1 |
| MS.gene072539.t1 | MTR_1g015110 | 29.889 | 271 | 134 | 10 | 69 | 299 | 291 | 545 | 4.43e-18 | 86.3 |
| MS.gene072539.t1 | MTR_1g086350 | 30.112 | 269 | 148 | 12 | 67 | 312 | 101 | 352 | 4.45e-18 | 85.1 |
| MS.gene072539.t1 | MTR_1g086350 | 30.112 | 269 | 148 | 12 | 67 | 312 | 117 | 368 | 5.56e-18 | 85.1 |
| MS.gene072539.t1 | MTR_3g104710 | 29.740 | 269 | 133 | 9 | 69 | 297 | 287 | 539 | 6.34e-18 | 85.5 |
| MS.gene072539.t1 | MTR_8g102550 | 30.412 | 194 | 120 | 6 | 69 | 258 | 153 | 335 | 6.49e-18 | 84.7 |
| MS.gene072539.t1 | MTR_2g040500 | 26.220 | 328 | 169 | 10 | 32 | 297 | 219 | 535 | 9.34e-18 | 85.1 |
| MS.gene072539.t1 | MTR_6g081850 | 29.825 | 285 | 151 | 12 | 40 | 295 | 52 | 316 | 9.79e-18 | 83.6 |
| MS.gene072539.t1 | MTR_4g116420 | 30.515 | 272 | 139 | 13 | 65 | 314 | 121 | 364 | 8.10e-17 | 81.6 |
| MS.gene072539.t1 | MTR_5g024340 | 27.922 | 308 | 166 | 14 | 16 | 295 | 64 | 343 | 1.54e-16 | 80.5 |
| MS.gene072539.t1 | MTR_2g033000 | 30.677 | 251 | 138 | 11 | 64 | 295 | 96 | 329 | 2.11e-16 | 80.1 |
| MS.gene072539.t1 | MTR_3g068200 | 30.047 | 213 | 117 | 6 | 66 | 261 | 121 | 318 | 3.36e-16 | 79.7 |
| MS.gene072539.t1 | MTR_7g112490 | 36.875 | 160 | 81 | 8 | 131 | 276 | 200 | 353 | 2.89e-15 | 77.0 |
| MS.gene072539.t1 | MTR_6g087000 | 27.859 | 341 | 180 | 18 | 4 | 297 | 60 | 381 | 3.96e-15 | 77.4 |
| MS.gene072539.t1 | MTR_7g112490 | 36.875 | 160 | 81 | 8 | 131 | 276 | 182 | 335 | 4.39e-15 | 76.3 |
| MS.gene072539.t1 | MTR_6g087000 | 27.859 | 341 | 180 | 18 | 4 | 297 | 60 | 381 | 6.14e-15 | 77.0 |
| MS.gene072539.t1 | MTR_2g020970 | 29.010 | 293 | 162 | 13 | 43 | 302 | 67 | 346 | 1.07e-14 | 75.1 |
| MS.gene072539.t1 | MTR_2g020970 | 28.425 | 292 | 165 | 12 | 43 | 302 | 67 | 346 | 1.86e-14 | 74.7 |
| MS.gene072539.t1 | MTR_7g021530 | 30.303 | 264 | 145 | 12 | 41 | 283 | 52 | 297 | 2.59e-14 | 73.9 |
| MS.gene072539.t1 | MTR_7g021530 | 30.303 | 264 | 145 | 12 | 41 | 283 | 102 | 347 | 4.87e-14 | 73.2 |
| MS.gene072539.t1 | MTR_7g021530 | 30.303 | 264 | 145 | 12 | 41 | 283 | 143 | 388 | 6.55e-14 | 73.2 |
| MS.gene072539.t1 | MTR_5g080680 | 28.641 | 206 | 121 | 7 | 69 | 261 | 133 | 325 | 8.98e-14 | 72.4 |
| MS.gene072539.t1 | MTR_1g028300 | 30.242 | 248 | 140 | 8 | 69 | 297 | 146 | 379 | 3.25e-13 | 70.9 |
| MS.gene072539.t1 | MTR_3g107880 | 28.315 | 279 | 151 | 11 | 61 | 318 | 58 | 308 | 4.44e-13 | 69.7 |
| MS.gene072539.t1 | MTR_3g107880 | 28.315 | 279 | 151 | 11 | 61 | 318 | 116 | 366 | 5.50e-13 | 70.1 |
| MS.gene072539.t1 | MTR_3g107880 | 28.315 | 279 | 151 | 11 | 61 | 318 | 115 | 365 | 5.73e-13 | 70.1 |
| MS.gene072539.t1 | MTR_3g105730 | 31.884 | 138 | 81 | 5 | 57 | 190 | 54 | 182 | 9.00e-13 | 67.4 |
| MS.gene072539.t1 | MTR_1g014190 | 25.869 | 259 | 121 | 10 | 54 | 257 | 38 | 280 | 1.69e-12 | 68.2 |
| MS.gene072539.t1 | MTR_1g014190 | 27.799 | 259 | 116 | 11 | 54 | 257 | 76 | 318 | 1.78e-12 | 68.6 |
| MS.gene072539.t1 | MTR_8g017240 | 31.000 | 200 | 109 | 10 | 99 | 283 | 135 | 320 | 2.05e-12 | 68.2 |
| MS.gene072539.t1 | MTR_4g007440 | 32.624 | 141 | 68 | 5 | 128 | 257 | 156 | 280 | 9.68e-12 | 66.2 |
| MS.gene072539.t1 | MTR_3g105880 | 31.206 | 141 | 70 | 5 | 128 | 257 | 156 | 280 | 1.54e-11 | 65.5 |
| MS.gene072539.t1 | MTR_3g105880 | 31.206 | 141 | 70 | 5 | 128 | 257 | 156 | 280 | 1.97e-11 | 64.7 |
| MS.gene072539.t1 | MTR_2g078760 | 33.077 | 130 | 72 | 5 | 68 | 193 | 117 | 235 | 2.86e-11 | 63.5 |
| MS.gene072539.t1 | MTR_7g070510 | 24.607 | 382 | 223 | 18 | 21 | 352 | 50 | 416 | 6.21e-11 | 63.9 |
| MS.gene072539.t1 | MTR_5g005810 | 26.172 | 256 | 147 | 9 | 66 | 297 | 334 | 571 | 7.13e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072539.t1 | AT1G09160 | 79.888 | 358 | 72 | 0 | 1 | 358 | 1 | 358 | 0.0 | 584 |
| MS.gene072539.t1 | AT1G09160 | 79.888 | 358 | 72 | 0 | 1 | 358 | 1 | 358 | 0.0 | 584 |
| MS.gene072539.t1 | AT1G68410 | 74.352 | 347 | 86 | 2 | 14 | 358 | 19 | 364 | 0.0 | 520 |
| MS.gene072539.t1 | AT1G68410 | 74.352 | 347 | 86 | 2 | 14 | 358 | 19 | 364 | 0.0 | 520 |
| MS.gene072539.t1 | AT1G68410 | 74.352 | 347 | 86 | 2 | 14 | 358 | 19 | 364 | 0.0 | 520 |
| MS.gene072539.t1 | AT1G68410 | 74.352 | 347 | 86 | 2 | 14 | 358 | 19 | 364 | 0.0 | 520 |
| MS.gene072539.t1 | AT1G47380 | 63.768 | 345 | 122 | 2 | 14 | 356 | 10 | 353 | 8.37e-158 | 450 |
| MS.gene072539.t1 | AT2G34740 | 35.294 | 238 | 130 | 9 | 66 | 298 | 117 | 335 | 1.06e-29 | 117 |
| MS.gene072539.t1 | AT4G31750 | 31.852 | 270 | 144 | 10 | 57 | 306 | 53 | 302 | 5.34e-29 | 114 |
| MS.gene072539.t1 | AT4G31750 | 31.852 | 270 | 144 | 10 | 57 | 306 | 53 | 302 | 5.34e-29 | 114 |
| MS.gene072539.t1 | AT1G07160 | 32.482 | 274 | 150 | 12 | 36 | 297 | 126 | 376 | 1.22e-28 | 115 |
| MS.gene072539.t1 | AT4G31750 | 33.061 | 245 | 138 | 9 | 57 | 295 | 53 | 277 | 4.74e-28 | 112 |
| MS.gene072539.t1 | AT5G10740 | 32.707 | 266 | 148 | 10 | 39 | 298 | 40 | 280 | 9.81e-28 | 112 |
| MS.gene072539.t1 | AT5G10740 | 32.707 | 266 | 148 | 10 | 39 | 298 | 40 | 280 | 9.81e-28 | 112 |
| MS.gene072539.t1 | AT5G24940 | 32.576 | 264 | 145 | 11 | 39 | 295 | 40 | 277 | 1.04e-26 | 110 |
| MS.gene072539.t1 | AT1G78200 | 34.322 | 236 | 128 | 10 | 68 | 295 | 19 | 235 | 3.03e-26 | 105 |
| MS.gene072539.t1 | AT1G78200 | 34.322 | 236 | 128 | 10 | 68 | 295 | 19 | 235 | 3.03e-26 | 105 |
| MS.gene072539.t1 | AT1G43900 | 32.967 | 273 | 146 | 14 | 34 | 295 | 120 | 366 | 5.98e-26 | 107 |
| MS.gene072539.t1 | AT4G26080 | 30.258 | 271 | 146 | 7 | 61 | 299 | 165 | 424 | 6.31e-26 | 108 |
| MS.gene072539.t1 | AT1G78200 | 34.322 | 236 | 128 | 10 | 68 | 295 | 64 | 280 | 1.14e-25 | 105 |
| MS.gene072539.t1 | AT1G78200 | 34.322 | 236 | 128 | 10 | 68 | 295 | 64 | 280 | 1.14e-25 | 105 |
| MS.gene072539.t1 | AT1G78200 | 34.322 | 236 | 128 | 10 | 68 | 295 | 64 | 280 | 1.14e-25 | 105 |
| MS.gene072539.t1 | AT1G22280 | 31.330 | 233 | 142 | 7 | 68 | 295 | 65 | 284 | 1.39e-25 | 105 |
| MS.gene072539.t1 | AT4G28400 | 31.760 | 233 | 135 | 8 | 68 | 295 | 45 | 258 | 7.67e-25 | 102 |
| MS.gene072539.t1 | AT5G53140 | 32.031 | 256 | 143 | 12 | 46 | 295 | 115 | 345 | 1.13e-24 | 104 |
| MS.gene072539.t1 | AT5G53140 | 32.031 | 256 | 143 | 12 | 46 | 295 | 115 | 345 | 1.13e-24 | 104 |
| MS.gene072539.t1 | AT2G20630 | 30.597 | 268 | 154 | 12 | 33 | 295 | 36 | 276 | 1.41e-24 | 102 |
| MS.gene072539.t1 | AT4G28400 | 31.760 | 233 | 135 | 8 | 68 | 295 | 67 | 280 | 1.60e-24 | 102 |
| MS.gene072539.t1 | AT5G57050 | 29.630 | 270 | 146 | 9 | 61 | 297 | 113 | 371 | 2.35e-24 | 103 |
| MS.gene072539.t1 | AT1G67820 | 31.646 | 237 | 137 | 10 | 34 | 263 | 78 | 296 | 2.76e-24 | 103 |
| MS.gene072539.t1 | AT5G57050 | 31.365 | 271 | 140 | 11 | 61 | 297 | 153 | 411 | 4.02e-24 | 103 |
| MS.gene072539.t1 | AT1G67820 | 31.646 | 237 | 137 | 10 | 34 | 263 | 114 | 332 | 4.77e-24 | 103 |
| MS.gene072539.t1 | AT2G20630 | 30.337 | 267 | 154 | 12 | 33 | 294 | 36 | 275 | 1.05e-23 | 99.8 |
| MS.gene072539.t1 | AT1G22280 | 31.330 | 233 | 136 | 8 | 68 | 295 | 65 | 278 | 1.28e-23 | 99.4 |
| MS.gene072539.t1 | AT1G34750 | 30.882 | 272 | 153 | 11 | 34 | 295 | 33 | 279 | 1.31e-23 | 99.4 |
| MS.gene072539.t1 | AT1G34750 | 30.882 | 272 | 153 | 11 | 34 | 295 | 33 | 279 | 1.31e-23 | 99.4 |
| MS.gene072539.t1 | AT1G34750 | 30.882 | 272 | 153 | 11 | 34 | 295 | 33 | 279 | 1.31e-23 | 99.4 |
| MS.gene072539.t1 | AT2G30020 | 29.889 | 271 | 160 | 12 | 36 | 297 | 143 | 392 | 1.79e-23 | 100 |
| MS.gene072539.t1 | AT2G40180 | 29.536 | 237 | 150 | 7 | 67 | 297 | 160 | 385 | 8.60e-23 | 99.0 |
| MS.gene072539.t1 | AT2G34740 | 31.731 | 208 | 122 | 6 | 66 | 270 | 131 | 321 | 8.32e-21 | 92.4 |
| MS.gene072539.t1 | AT2G34740 | 31.731 | 208 | 122 | 6 | 66 | 270 | 113 | 303 | 8.45e-21 | 92.0 |
| MS.gene072539.t1 | AT2G40860 | 29.643 | 280 | 156 | 9 | 36 | 299 | 396 | 650 | 4.25e-20 | 92.4 |
| MS.gene072539.t1 | AT2G40860 | 29.643 | 280 | 156 | 9 | 36 | 299 | 298 | 552 | 5.79e-20 | 91.7 |
| MS.gene072539.t1 | AT3G15260 | 31.330 | 233 | 136 | 9 | 68 | 295 | 73 | 286 | 2.34e-19 | 87.8 |
| MS.gene072539.t1 | AT3G15260 | 31.330 | 233 | 136 | 9 | 68 | 295 | 73 | 286 | 2.34e-19 | 87.8 |
| MS.gene072539.t1 | AT3G51470 | 28.920 | 287 | 161 | 13 | 46 | 315 | 42 | 302 | 1.36e-18 | 85.9 |
| MS.gene072539.t1 | AT2G40860 | 29.958 | 237 | 128 | 7 | 36 | 258 | 396 | 608 | 1.63e-18 | 87.4 |
| MS.gene072539.t1 | AT3G51470 | 28.283 | 297 | 170 | 13 | 36 | 315 | 76 | 346 | 2.34e-18 | 85.9 |
| MS.gene072539.t1 | AT3G62260 | 29.323 | 266 | 152 | 13 | 67 | 311 | 26 | 276 | 3.68e-18 | 84.3 |
| MS.gene072539.t1 | AT3G62260 | 28.889 | 270 | 156 | 13 | 67 | 315 | 115 | 369 | 1.23e-17 | 84.0 |
| MS.gene072539.t1 | AT2G25620 | 29.434 | 265 | 134 | 11 | 67 | 305 | 127 | 364 | 1.44e-17 | 84.0 |
| MS.gene072539.t1 | AT2G25620 | 29.434 | 265 | 134 | 11 | 67 | 305 | 127 | 364 | 1.44e-17 | 84.0 |
| MS.gene072539.t1 | AT3G62260 | 28.889 | 270 | 156 | 13 | 67 | 315 | 116 | 370 | 1.46e-17 | 83.6 |
| MS.gene072539.t1 | AT1G34750 | 28.571 | 238 | 136 | 10 | 34 | 262 | 33 | 245 | 1.50e-16 | 79.0 |
| MS.gene072539.t1 | AT4G28400 | 30.159 | 189 | 110 | 6 | 68 | 252 | 67 | 237 | 1.73e-16 | 79.0 |
| MS.gene072539.t1 | AT1G18030 | 28.627 | 255 | 136 | 10 | 69 | 295 | 110 | 346 | 7.78e-16 | 78.2 |
| MS.gene072539.t1 | AT5G59220 | 28.436 | 211 | 125 | 7 | 63 | 261 | 143 | 339 | 9.49e-16 | 78.6 |
| MS.gene072539.t1 | AT2G33700 | 27.273 | 253 | 144 | 9 | 63 | 299 | 118 | 346 | 1.74e-15 | 77.4 |
| MS.gene072539.t1 | AT1G07430 | 28.311 | 219 | 124 | 7 | 64 | 265 | 153 | 355 | 2.20e-14 | 74.7 |
| MS.gene072539.t1 | AT1G17550 | 26.207 | 290 | 147 | 10 | 59 | 297 | 228 | 501 | 6.16e-14 | 73.6 |
| MS.gene072539.t1 | AT1G17550 | 26.207 | 290 | 147 | 10 | 59 | 297 | 228 | 501 | 6.16e-14 | 73.6 |
| MS.gene072539.t1 | AT5G26010 | 28.365 | 208 | 125 | 10 | 70 | 258 | 75 | 277 | 2.83e-13 | 70.5 |
| MS.gene072539.t1 | AT4G32950 | 27.519 | 258 | 162 | 8 | 71 | 314 | 75 | 321 | 4.18e-13 | 70.1 |
| MS.gene072539.t1 | AT2G40860 | 29.536 | 237 | 126 | 8 | 36 | 255 | 396 | 608 | 6.00e-13 | 70.5 |
| MS.gene072539.t1 | AT3G17250 | 27.863 | 262 | 147 | 13 | 66 | 303 | 156 | 399 | 7.76e-13 | 69.7 |
| MS.gene072539.t1 | AT3G11410 | 27.064 | 218 | 118 | 7 | 69 | 261 | 138 | 339 | 1.36e-12 | 68.9 |
| MS.gene072539.t1 | AT4G27800 | 24.390 | 328 | 175 | 13 | 40 | 320 | 67 | 368 | 1.45e-12 | 68.9 |
| MS.gene072539.t1 | AT1G72770 | 27.064 | 218 | 114 | 7 | 69 | 257 | 239 | 440 | 2.53e-12 | 68.6 |
| MS.gene072539.t1 | AT1G72770 | 27.064 | 218 | 114 | 7 | 69 | 257 | 239 | 440 | 2.53e-12 | 68.6 |
| MS.gene072539.t1 | AT1G72770 | 27.064 | 218 | 114 | 7 | 69 | 257 | 239 | 440 | 2.53e-12 | 68.6 |
| MS.gene072539.t1 | AT5G27930 | 33.125 | 160 | 90 | 7 | 103 | 251 | 148 | 301 | 6.36e-12 | 66.2 |
| MS.gene072539.t1 | AT1G18030 | 29.327 | 208 | 106 | 9 | 69 | 253 | 110 | 299 | 9.54e-12 | 65.9 |
| MS.gene072539.t1 | AT1G16220 | 26.587 | 252 | 147 | 8 | 84 | 301 | 131 | 378 | 1.04e-11 | 66.6 |
| MS.gene072539.t1 | AT1G79630 | 30.319 | 188 | 113 | 6 | 131 | 304 | 151 | 334 | 1.24e-11 | 66.2 |
| MS.gene072539.t1 | AT1G79630 | 30.319 | 188 | 113 | 6 | 131 | 304 | 151 | 334 | 1.24e-11 | 66.2 |
| MS.gene072539.t1 | AT1G79630 | 30.319 | 188 | 113 | 6 | 131 | 304 | 111 | 294 | 1.58e-11 | 65.5 |
| MS.gene072539.t1 | AT1G79630 | 30.319 | 188 | 113 | 6 | 131 | 304 | 111 | 294 | 1.58e-11 | 65.5 |
| MS.gene072539.t1 | AT1G79630 | 30.319 | 188 | 113 | 6 | 131 | 304 | 111 | 294 | 1.58e-11 | 65.5 |
| MS.gene072539.t1 | AT1G79630 | 30.319 | 188 | 113 | 6 | 131 | 304 | 111 | 294 | 1.58e-11 | 65.5 |
| MS.gene072539.t1 | AT1G79630 | 30.319 | 188 | 113 | 6 | 131 | 304 | 217 | 400 | 1.92e-11 | 65.9 |
| MS.gene072539.t1 | AT4G27800 | 25.385 | 260 | 130 | 9 | 40 | 257 | 67 | 304 | 2.76e-11 | 64.7 |
| MS.gene072539.t1 | AT5G01700 | 27.469 | 324 | 183 | 17 | 60 | 345 | 23 | 332 | 2.83e-11 | 64.7 |
| MS.gene072539.t1 | AT1G79630 | 30.319 | 188 | 113 | 6 | 131 | 304 | 221 | 404 | 2.84e-11 | 65.1 |
| MS.gene072539.t1 | AT3G06270 | 28.720 | 289 | 158 | 14 | 43 | 297 | 68 | 342 | 3.01e-11 | 64.7 |
| MS.gene072539.t1 | AT4G27800 | 25.385 | 260 | 130 | 9 | 40 | 257 | 67 | 304 | 3.54e-11 | 64.3 |
| MS.gene072539.t1 | AT2G29380 | 25.524 | 286 | 163 | 12 | 2 | 261 | 46 | 307 | 6.42e-11 | 63.5 |
| MS.gene072539.t1 | AT3G02750 | 30.233 | 215 | 120 | 10 | 106 | 296 | 186 | 394 | 6.89e-11 | 63.9 |
| MS.gene072539.t1 | AT3G02750 | 30.233 | 215 | 120 | 10 | 106 | 296 | 186 | 394 | 6.89e-11 | 63.9 |
| MS.gene072539.t1 | AT5G51760 | 24.696 | 247 | 146 | 7 | 40 | 260 | 86 | 318 | 8.66e-11 | 63.5 |
| MS.gene072539.t1 | AT5G01700 | 27.778 | 324 | 182 | 17 | 60 | 345 | 72 | 381 | 8.69e-11 | 63.2 |
Find 111 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAGCCTCTGATGGTATT+TGG | 0.132240 | 7.3:+4090795 | MS.gene072539:CDS |
| AAAGTAATCTTCTCCTTTCT+TGG | 0.184037 | 7.3:-4089321 | None:intergenic |
| GTAGGACGACTCAATATATT+TGG | 0.216620 | 7.3:+4090442 | MS.gene072539:CDS |
| GCTACATTTGTTATAGTTGA+TGG | 0.263958 | 7.3:+4090277 | MS.gene072539:CDS |
| GGACACTTTATCTAATGATA+TGG | 0.286784 | 7.3:+4090817 | MS.gene072539:CDS |
| ATGCTAACCACACTTCTCTT+TGG | 0.296822 | 7.3:+4091095 | MS.gene072539:CDS |
| TCATACACAGGGGAAACTTC+TGG | 0.320861 | 7.3:+4090247 | MS.gene072539:intron |
| TATAGCCTCTGATGGTATTT+GGG | 0.324814 | 7.3:+4090796 | MS.gene072539:CDS |
| AATGCAAATATGAATTTAGT+TGG | 0.339808 | 7.3:-4091238 | None:intergenic |
| CTGTCACTGTTGCATCTGTT+GGG | 0.347808 | 7.3:+4090305 | MS.gene072539:CDS |
| ACAGATTGCCACAGGGTTCC+CGG | 0.349347 | 7.3:+4089353 | MS.gene072539:CDS |
| TTTGAAGTAGGTGGTAATAC+AGG | 0.365809 | 7.3:-4091059 | None:intergenic |
| TTTCCTCAGCTTTCAAGTGC+TGG | 0.379190 | 7.3:+4090761 | MS.gene072539:intron |
| TAGGACGACTCAATATATTT+GGG | 0.381148 | 7.3:+4090443 | MS.gene072539:CDS |
| GTTCCATTGGCCACTTTGAT+TGG | 0.383557 | 7.3:+4089236 | MS.gene072539:CDS |
| CGATACCGCAAGATATCAAC+AGG | 0.387187 | 7.3:+4090081 | MS.gene072539:CDS |
| TGCTGCAAAGCTGGTGGTTA+AGG | 0.391611 | 7.3:+4090874 | MS.gene072539:CDS |
| TGGAAGAGAATGTAGAAGAG+AGG | 0.399590 | 7.3:+4090392 | MS.gene072539:CDS |
| CTTCCTCGCGCTCTAGTTGT+TGG | 0.403102 | 7.3:+4090122 | MS.gene072539:CDS |
| GGCAGGTTGTATCATCCTTC+AGG | 0.404506 | 7.3:-4091007 | None:intergenic |
| ACTTGCTTAACATGTGGTAT+TGG | 0.408350 | 7.3:-4090634 | None:intergenic |
| AAGCTTGCTAGTGGCTTTGT+TGG | 0.414421 | 7.3:-4091138 | None:intergenic |
| TATGGCCGCCATGTCATGTC+GGG | 0.417110 | 7.3:+4090835 | MS.gene072539:CDS |
| TGCGGAGCTTGCTGCAAAGC+TGG | 0.418595 | 7.3:+4090865 | MS.gene072539:CDS |
| CAAGTTTGGACAAGCTGGAT+TGG | 0.419868 | 7.3:+4089298 | MS.gene072539:CDS |
| AAGACGGAAAACGCGGTTGA+TGG | 0.435385 | 7.3:-4089380 | None:intergenic |
| ATCAAAGTGGCCAATGGAAC+TGG | 0.436317 | 7.3:-4089233 | None:intergenic |
| CTGAGTATCTAATATGCAAC+GGG | 0.448005 | 7.3:-4090332 | None:intergenic |
| ACTGTCACTGTTGCATCTGT+TGG | 0.448709 | 7.3:+4090304 | MS.gene072539:CDS |
| TTTGTCAAGTTTGGACAAGC+TGG | 0.455005 | 7.3:+4089293 | MS.gene072539:CDS |
| TTGTGCCTATCTAGATCAAT+TGG | 0.456296 | 7.3:+4090583 | MS.gene072539:CDS |
| AGGTAGGTCCTCTTCGCTGC+TGG | 0.460279 | 7.3:+4090551 | MS.gene072539:intron |
| CAGATTGCCACAGGGTTCCC+GGG | 0.464567 | 7.3:+4089354 | MS.gene072539:CDS |
| GCTTGTCCAAACTTGACAAA+AGG | 0.466330 | 7.3:-4089290 | None:intergenic |
| TGTCTCCAATTGATCTAGAT+AGG | 0.466362 | 7.3:-4090588 | None:intergenic |
| ATGCAAATATGAATTTAGTT+GGG | 0.472304 | 7.3:-4091237 | None:intergenic |
| GGTCCTCTTCGCTGCTGGCC+CGG | 0.476949 | 7.3:+4090556 | MS.gene072539:CDS |
| AGCTTTCAAGTGCTGGTGGA+AGG | 0.479535 | 7.3:+4090768 | MS.gene072539:intron |
| CAACAGGGATGCATGGCTAC+AGG | 0.481389 | 7.3:+4090097 | MS.gene072539:CDS |
| TAATCAAAACAGATTGCCAC+AGG | 0.485310 | 7.3:+4089345 | MS.gene072539:CDS |
| CCAGTCTATGATCAACTGTC+AGG | 0.485755 | 7.3:-4090372 | None:intergenic |
| CCGTTGCATATTAGATACTC+AGG | 0.487206 | 7.3:+4090333 | MS.gene072539:CDS |
| TCTAGATAGGCACAATCCAC+CGG | 0.487715 | 7.3:-4090575 | None:intergenic |
| AGCTTTGCAGCAAGCTCCGC+AGG | 0.489755 | 7.3:-4090863 | None:intergenic |
| AATAATATCTACAACAAGGC+AGG | 0.494608 | 7.3:-4091024 | None:intergenic |
| CCTCAGCTTTCAAGTGCTGG+TGG | 0.495792 | 7.3:+4090764 | MS.gene072539:intron |
| TCGTCCTACTTCGCCACCAC+TGG | 0.499559 | 7.3:-4090428 | None:intergenic |
| AACGCGGTTGATGGATCCCC+GGG | 0.503812 | 7.3:-4089371 | None:intergenic |
| CAACAACTAGAGCGCGAGGA+AGG | 0.504666 | 7.3:-4090121 | None:intergenic |
| CATTTGTTATAGTTGATGGA+TGG | 0.506436 | 7.3:+4090281 | MS.gene072539:CDS |
| GAAGCCATCACCAGTTCCAT+TGG | 0.507591 | 7.3:+4089223 | MS.gene072539:CDS |
| ACTAGCAAGCTTTCTGCAGT+TGG | 0.512919 | 7.3:+4091149 | MS.gene072539:CDS |
| ACTGCCAGTGGTGGCGAAGT+AGG | 0.518277 | 7.3:+4090424 | MS.gene072539:CDS |
| CAAGCTGGATTGGCCAAGAA+AGG | 0.521862 | 7.3:+4089308 | MS.gene072539:CDS |
| GCTTTCTGCAGTTGGTGTTG+TGG | 0.524033 | 7.3:+4091157 | MS.gene072539:CDS |
| CCTGACAGTTGATCATAGAC+TGG | 0.530356 | 7.3:+4090372 | MS.gene072539:CDS |
| TGTCACTGTTGCATCTGTTG+GGG | 0.547608 | 7.3:+4090306 | MS.gene072539:CDS |
| TTGAAGTAGGTGGTAATACA+GGG | 0.548361 | 7.3:-4091058 | None:intergenic |
| TGCTTATAGAAAGGTATGGA+TGG | 0.550979 | 7.3:+4091207 | MS.gene072539:CDS |
| TGACACGGAGTTTCAGAAGA+AGG | 0.553825 | 7.3:+4090157 | MS.gene072539:CDS |
| CGGCCAATCAAAGTGGCCAA+TGG | 0.555333 | 7.3:-4089239 | None:intergenic |
| GTTCTGCAATGCTTATAGAA+AGG | 0.558028 | 7.3:+4091198 | MS.gene072539:CDS |
| AAACGCGGTTGATGGATCCC+CGG | 0.560628 | 7.3:-4089372 | None:intergenic |
| GGAAGAGAATGTAGAAGAGA+GGG | 0.565211 | 7.3:+4090393 | MS.gene072539:CDS |
| GGTAATACAGGGTGGTCAGA+AGG | 0.568381 | 7.3:-4091047 | None:intergenic |
| ATAGAAAGGTATGGATGGCA+TGG | 0.570296 | 7.3:+4091212 | MS.gene072539:CDS |
| TCAATTGGAGACACAGATGT+GGG | 0.570505 | 7.3:+4090598 | MS.gene072539:CDS |
| TCTAAGATCTAGAGGCCTGA+AGG | 0.576729 | 7.3:+4090992 | MS.gene072539:CDS |
| ACTTTCACTTGCTTAACATG+TGG | 0.580187 | 7.3:-4090640 | None:intergenic |
| CCACCGGGCCAGCAGCGAAG+AGG | 0.584691 | 7.3:-4090559 | None:intergenic |
| CCTCTTCGCTGCTGGCCCGG+TGG | 0.584827 | 7.3:+4090559 | MS.gene072539:CDS |
| AAGATATCAACAGGGATGCA+TGG | 0.585657 | 7.3:+4090090 | MS.gene072539:CDS |
| CTAGATAGGCACAATCCACC+GGG | 0.587266 | 7.3:-4090574 | None:intergenic |
| CCTGAGTATCTAATATGCAA+CGG | 0.590038 | 7.3:-4090333 | None:intergenic |
| GAGCGTGTTACTGCCAGTGG+TGG | 0.591453 | 7.3:+4090415 | MS.gene072539:CDS |
| GCAATGCTTATAGAAAGGTA+TGG | 0.591458 | 7.3:+4091203 | MS.gene072539:CDS |
| TGAGTAAACGTGAATTGTCA+AGG | 0.591578 | 7.3:+4089198 | MS.gene072539:CDS |
| ATAAAGTAATACCGCAAAGA+CGG | 0.592761 | 7.3:-4089396 | None:intergenic |
| GCATCCCTGTTGATATCTTG+CGG | 0.595250 | 7.3:-4090086 | None:intergenic |
| ATCAATTGGAGACACAGATG+TGG | 0.598665 | 7.3:+4090597 | MS.gene072539:CDS |
| AGTGTCCCAAATACCATCAG+AGG | 0.599906 | 7.3:-4090801 | None:intergenic |
| GTGGCCAATGGAACTGGTGA+TGG | 0.600467 | 7.3:-4089227 | None:intergenic |
| CTTTCTCATTTCGAATCTCG+CGG | 0.603912 | 7.3:-4089259 | None:intergenic |
| TACCGCAAAGACGGAAAACG+CGG | 0.607314 | 7.3:-4089387 | None:intergenic |
| AGGTAGACCCCGACATGACA+TGG | 0.607364 | 7.3:-4090843 | None:intergenic |
| AGGCTTATTATAGCCTCTGA+TGG | 0.608901 | 7.3:+4090788 | MS.gene072539:CDS |
| AACAACTAGAGCGCGAGGAA+GGG | 0.608942 | 7.3:-4090120 | None:intergenic |
| ATATGGCCGCCATGTCATGT+CGG | 0.614370 | 7.3:+4090834 | MS.gene072539:CDS |
| CGTTGCATATTAGATACTCA+GGG | 0.617011 | 7.3:+4090334 | MS.gene072539:CDS |
| GTCATGTCGGGGTCTACCTG+CGG | 0.618990 | 7.3:+4090847 | MS.gene072539:CDS |
| AGGGAGCGTGTTACTGCCAG+TGG | 0.622185 | 7.3:+4090412 | MS.gene072539:CDS |
| AAACCAACAACTAGAGCGCG+AGG | 0.623767 | 7.3:-4090125 | None:intergenic |
| AGGACGACTCAATATATTTG+GGG | 0.625135 | 7.3:+4090444 | MS.gene072539:CDS |
| TTTCTTTCCAAAGAGAAGTG+TGG | 0.629336 | 7.3:-4091102 | None:intergenic |
| CAATTGGAGACACAGATGTG+GGG | 0.631303 | 7.3:+4090599 | MS.gene072539:CDS |
| CAGGAAGCTCTAAGATCTAG+AGG | 0.631425 | 7.3:+4090984 | MS.gene072539:intron |
| AACTGCAGAAAGCTTGCTAG+TGG | 0.637588 | 7.3:-4091147 | None:intergenic |
| GGAGCTTGCTGCAAAGCTGG+TGG | 0.644503 | 7.3:+4090868 | MS.gene072539:CDS |
| AGATTGCCACAGGGTTCCCG+GGG | 0.645904 | 7.3:+4089355 | MS.gene072539:CDS |
| AATTGGAGACACAGATGTGG+GGG | 0.647919 | 7.3:+4090600 | MS.gene072539:CDS |
| GACACGGAGTTTCAGAAGAA+GGG | 0.648948 | 7.3:+4090158 | MS.gene072539:CDS |
| ATGGCCGCCATGTCATGTCG+GGG | 0.652224 | 7.3:+4090836 | MS.gene072539:CDS |
| AATCTCGCGGCCAATCAAAG+TGG | 0.661716 | 7.3:-4089246 | None:intergenic |
| AATCAAAACAGATTGCCACA+GGG | 0.679930 | 7.3:+4089346 | MS.gene072539:CDS |
| ATGGATCCCCGGGAACCCTG+TGG | 0.685150 | 7.3:-4089361 | None:intergenic |
| GGACGACTCAATATATTTGG+GGG | 0.690993 | 7.3:+4090445 | MS.gene072539:CDS |
| AAGGAATAATATCTACAACA+AGG | 0.707247 | 7.3:-4091028 | None:intergenic |
| TGCATATTAGATACTCAGGG+AGG | 0.745767 | 7.3:+4090337 | MS.gene072539:CDS |
| AAGTAGGTGGTAATACAGGG+TGG | 0.749203 | 7.3:-4091055 | None:intergenic |
| TAGACCCCGACATGACATGG+CGG | 0.769473 | 7.3:-4090840 | None:intergenic |
| GATACCGCAAGATATCAACA+GGG | 0.804220 | 7.3:+4090082 | MS.gene072539:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTGAGTTTTAAGAAAT+TGG | + | chr7.3:4089498-4089517 | MS.gene072539:intron | 15.0% |
| !! | AATGCAAATATGAATTTAGT+TGG | - | chr7.3:4091241-4091260 | None:intergenic | 20.0% |
| !! | AGTAAATAAGCAAATCTAAA+CGG | - | chr7.3:4089618-4089637 | None:intergenic | 20.0% |
| !! | ATGCAAATATGAATTTAGTT+GGG | - | chr7.3:4091240-4091259 | None:intergenic | 20.0% |
| ! | AAAGAACGTAATAATGAAAC+CGG | - | chr7.3:4090669-4090688 | None:intergenic | 25.0% |
| ! | AACTCAACTCAAATAACTAT+AGG | - | chr7.3:4089439-4089458 | None:intergenic | 25.0% |
| ! | AAGGAATAATATCTACAACA+AGG | - | chr7.3:4091031-4091050 | None:intergenic | 25.0% |
| ! | ACATCTTAATTTCATACACA+GGG | + | chr7.3:4090236-4090255 | MS.gene072539:intron | 25.0% |
| ! | ACATTTATAAGTAACAAGTG+GGG | + | chr7.3:4089930-4089949 | MS.gene072539:intron | 25.0% |
| ! | CACATTTATAAGTAACAAGT+GGG | + | chr7.3:4089929-4089948 | MS.gene072539:intron | 25.0% |
| ! | TCACATTTATAAGTAACAAG+TGG | + | chr7.3:4089928-4089947 | MS.gene072539:intron | 25.0% |
| ! | TTAAGTAACTGTTACTAGAA+GGG | - | chr7.3:4090498-4090517 | None:intergenic | 25.0% |
| ! | TTTAAGTAACTGTTACTAGA+AGG | - | chr7.3:4090499-4090518 | None:intergenic | 25.0% |
| !! | CATTATTACGTTCTTTTCTT+TGG | + | chr7.3:4090673-4090692 | MS.gene072539:intron | 25.0% |
| !! | GTTGATAAGGAATTCTTAAT+TGG | + | chr7.3:4089982-4090001 | MS.gene072539:intron | 25.0% |
| !!! | TTATGCTTCTTTTTTGAAGT+AGG | - | chr7.3:4091074-4091093 | None:intergenic | 25.0% |
| AAAGTAATCTTCTCCTTTCT+TGG | - | chr7.3:4089324-4089343 | None:intergenic | 30.0% | |
| AATAATATCTACAACAAGGC+AGG | - | chr7.3:4091027-4091046 | None:intergenic | 30.0% | |
| ATAAAGTAATACCGCAAAGA+CGG | - | chr7.3:4089399-4089418 | None:intergenic | 30.0% | |
| ATTAAGCTGAAAACAGCTTA+TGG | - | chr7.3:4089698-4089717 | None:intergenic | 30.0% | |
| CAATGGTTATGATGTTGATA+AGG | + | chr7.3:4089969-4089988 | MS.gene072539:intron | 30.0% | |
| CATCTTAATTTCATACACAG+GGG | + | chr7.3:4090237-4090256 | MS.gene072539:intron | 30.0% | |
| GACATCTTAATTTCATACAC+AGG | + | chr7.3:4090235-4090254 | MS.gene072539:intron | 30.0% | |
| GAGATACATTTGTCTTTCTT+CGG | + | chr7.3:4089583-4089602 | MS.gene072539:intron | 30.0% | |
| GGACACTTTATCTAATGATA+TGG | + | chr7.3:4090817-4090836 | MS.gene072539:CDS | 30.0% | |
| GGGAGAAAAGAAAAGAAAAA+AGG | - | chr7.3:4090965-4090984 | None:intergenic | 30.0% | |
| TAGGACGACTCAATATATTT+GGG | + | chr7.3:4090443-4090462 | MS.gene072539:CDS | 30.0% | |
| TGATTGTGAGAAATCTAACT+TGG | - | chr7.3:4090727-4090746 | None:intergenic | 30.0% | |
| TGCGGTATTACTTTATTCTT+TGG | + | chr7.3:4089403-4089422 | MS.gene072539:intron | 30.0% | |
| TTGTTCGCAAATATGTTTGT+AGG | + | chr7.3:4090531-4090550 | MS.gene072539:intron | 30.0% | |
| ! | AAAGTGCTTGTAAGCATTTA+GGG | - | chr7.3:4089837-4089856 | None:intergenic | 30.0% |
| ! | ATCAAGTTGTTTATCCAAAC+AGG | + | chr7.3:4089857-4089876 | MS.gene072539:intron | 30.0% |
| ! | ATTTGTCTTTCTTCGGTTTT+AGG | + | chr7.3:4089590-4089609 | MS.gene072539:intron | 30.0% |
| ! | CTTAATTGGCAGATTTTTGA+CGG | + | chr7.3:4089996-4090015 | MS.gene072539:intron | 30.0% |
| ! | GAAAAACCTTTTGTCAAGTT+TGG | + | chr7.3:4089284-4089303 | MS.gene072539:CDS | 30.0% |
| ! | TAAAGTGCTTGTAAGCATTT+AGG | - | chr7.3:4089838-4089857 | None:intergenic | 30.0% |
| ! | TTAATTGGCAGATTTTTGAC+GGG | + | chr7.3:4089997-4090016 | MS.gene072539:intron | 30.0% |
| ! | TTTTTCTTTTCTTTTCTCCC+AGG | + | chr7.3:4090965-4090984 | MS.gene072539:intron | 30.0% |
| !! | AGACTGTTTGAGACATTTTA+TGG | + | chr7.3:4089654-4089673 | MS.gene072539:intron | 30.0% |
| !! | CATTTGTTATAGTTGATGGA+TGG | + | chr7.3:4090281-4090300 | MS.gene072539:CDS | 30.0% |
| !! | GCTACATTTGTTATAGTTGA+TGG | + | chr7.3:4090277-4090296 | MS.gene072539:CDS | 30.0% |
| AATCAAAACAGATTGCCACA+GGG | + | chr7.3:4089346-4089365 | MS.gene072539:CDS | 35.0% | |
| ACTTGCTTAACATGTGGTAT+TGG | - | chr7.3:4090637-4090656 | None:intergenic | 35.0% | |
| ACTTTCACTTGCTTAACATG+TGG | - | chr7.3:4090643-4090662 | None:intergenic | 35.0% | |
| AGGACGACTCAATATATTTG+GGG | + | chr7.3:4090444-4090463 | MS.gene072539:CDS | 35.0% | |
| ATCAACATCATAACCATTGC+AGG | - | chr7.3:4089968-4089987 | None:intergenic | 35.0% | |
| CCTGAGTATCTAATATGCAA+CGG | - | chr7.3:4090336-4090355 | None:intergenic | 35.0% | |
| CGTTGCATATTAGATACTCA+GGG | + | chr7.3:4090334-4090353 | MS.gene072539:CDS | 35.0% | |
| CTGAGTATCTAATATGCAAC+GGG | - | chr7.3:4090335-4090354 | None:intergenic | 35.0% | |
| GCAATGCTTATAGAAAGGTA+TGG | + | chr7.3:4091203-4091222 | MS.gene072539:CDS | 35.0% | |
| GCATCAATTTATTCCTGCAA+TGG | + | chr7.3:4089952-4089971 | MS.gene072539:intron | 35.0% | |
| GTAGGACGACTCAATATATT+TGG | + | chr7.3:4090442-4090461 | MS.gene072539:CDS | 35.0% | |
| GTTCTGCAATGCTTATAGAA+AGG | + | chr7.3:4091198-4091217 | MS.gene072539:CDS | 35.0% | |
| TAATCAAAACAGATTGCCAC+AGG | + | chr7.3:4089345-4089364 | MS.gene072539:CDS | 35.0% | |
| TATAGCCTCTGATGGTATTT+GGG | + | chr7.3:4090796-4090815 | MS.gene072539:CDS | 35.0% | |
| TCGCAAATATGTTTGTAGGT+AGG | + | chr7.3:4090535-4090554 | MS.gene072539:intron | 35.0% | |
| TGAGTAAACGTGAATTGTCA+AGG | + | chr7.3:4089198-4089217 | MS.gene072539:CDS | 35.0% | |
| TGGAAGTTTATTCTGCATAG+TGG | + | chr7.3:4089554-4089573 | MS.gene072539:intron | 35.0% | |
| TGTCTCCAATTGATCTAGAT+AGG | - | chr7.3:4090591-4090610 | None:intergenic | 35.0% | |
| TGTTACTAGAAGGGAAAAAG+TGG | - | chr7.3:4090489-4090508 | None:intergenic | 35.0% | |
| TTATAGCCTCTGATGGTATT+TGG | + | chr7.3:4090795-4090814 | MS.gene072539:CDS | 35.0% | |
| TTGAAGTAGGTGGTAATACA+GGG | - | chr7.3:4091061-4091080 | None:intergenic | 35.0% | |
| TTGTGCCTATCTAGATCAAT+TGG | + | chr7.3:4090583-4090602 | MS.gene072539:CDS | 35.0% | |
| TTTCTTTCCAAAGAGAAGTG+TGG | - | chr7.3:4091105-4091124 | None:intergenic | 35.0% | |
| ! | GACATTCTTCTCACATTTTC+TGG | + | chr7.3:4090908-4090927 | MS.gene072539:intron | 35.0% |
| ! | TGCTTATAGAAAGGTATGGA+TGG | + | chr7.3:4091207-4091226 | MS.gene072539:CDS | 35.0% |
| ! | TTATTCTGCATAGTGGAGAA+TGG | + | chr7.3:4089561-4089580 | MS.gene072539:intron | 35.0% |
| ! | TTTGAAGTAGGTGGTAATAC+AGG | - | chr7.3:4091062-4091081 | None:intergenic | 35.0% |
| !! | TCTTCTCACATTTTCTGGAA+TGG | + | chr7.3:4090913-4090932 | MS.gene072539:intron | 35.0% |
| !! | TCTTTGGTGTCTCTTATATG+TGG | + | chr7.3:4090689-4090708 | MS.gene072539:intron | 35.0% |
| !!! | CATTTTCTGGAATGGATGTT+TGG | + | chr7.3:4090921-4090940 | MS.gene072539:intron | 35.0% |
| !!! | TGCTTCTTTTTTGAAGTAGG+TGG | - | chr7.3:4091071-4091090 | None:intergenic | 35.0% |
| AAGATATCAACAGGGATGCA+TGG | + | chr7.3:4090090-4090109 | MS.gene072539:CDS | 40.0% | |
| AGGCTTATTATAGCCTCTGA+TGG | + | chr7.3:4090788-4090807 | MS.gene072539:CDS | 40.0% | |
| ATCAATTGGAGACACAGATG+TGG | + | chr7.3:4090597-4090616 | MS.gene072539:CDS | 40.0% | |
| ATCCATGAAGCAAGCAAACA+AGG | - | chr7.3:4090195-4090214 | None:intergenic | 40.0% | |
| ATGCTAACCACACTTCTCTT+TGG | + | chr7.3:4091095-4091114 | MS.gene072539:CDS | 40.0% | |
| CAATATATTTGGGGGCAATG+AGG | + | chr7.3:4090453-4090472 | MS.gene072539:CDS | 40.0% | |
| CCGTTGCATATTAGATACTC+AGG | + | chr7.3:4090333-4090352 | MS.gene072539:CDS | 40.0% | |
| CTTTCTCATTTCGAATCTCG+CGG | - | chr7.3:4089262-4089281 | None:intergenic | 40.0% | |
| GACATCTACTAAGTCCTGTT+TGG | - | chr7.3:4089874-4089893 | None:intergenic | 40.0% | |
| GATACCGCAAGATATCAACA+GGG | + | chr7.3:4090082-4090101 | MS.gene072539:CDS | 40.0% | |
| GCTTGTCCAAACTTGACAAA+AGG | - | chr7.3:4089293-4089312 | None:intergenic | 40.0% | |
| GGAAGAGAATGTAGAAGAGA+GGG | + | chr7.3:4090393-4090412 | MS.gene072539:CDS | 40.0% | |
| GGACGACTCAATATATTTGG+GGG | + | chr7.3:4090445-4090464 | MS.gene072539:CDS | 40.0% | |
| GTTGAGAGTTGAGTATGAGT+TGG | + | chr7.3:4089534-4089553 | MS.gene072539:intron | 40.0% | |
| TCAATTGGAGACACAGATGT+GGG | + | chr7.3:4090598-4090617 | MS.gene072539:CDS | 40.0% | |
| TCTAGATCTTAGAGCTTCCT+GGG | - | chr7.3:4090985-4091004 | None:intergenic | 40.0% | |
| TGCATATTAGATACTCAGGG+AGG | + | chr7.3:4090337-4090356 | MS.gene072539:CDS | 40.0% | |
| TGGAAGAGAATGTAGAAGAG+AGG | + | chr7.3:4090392-4090411 | MS.gene072539:CDS | 40.0% | |
| TTAAGCAAGTGAAAGTGAGC+CGG | + | chr7.3:4090647-4090666 | MS.gene072539:intron | 40.0% | |
| TTTGTCAAGTTTGGACAAGC+TGG | + | chr7.3:4089293-4089312 | MS.gene072539:CDS | 40.0% | |
| ! | ATAGAAAGGTATGGATGGCA+TGG | + | chr7.3:4091212-4091231 | MS.gene072539:CDS | 40.0% |
| !! | GCTGTTTTCATAAGCTAGCT+TGG | - | chr7.3:4089733-4089752 | None:intergenic | 40.0% |
| !! | GTGGAAGAGCTTTTTGAAGA+GGG | + | chr7.3:4091176-4091195 | MS.gene072539:CDS | 40.0% |
| !! | TGTGGAAGAGCTTTTTGAAG+AGG | + | chr7.3:4091175-4091194 | MS.gene072539:CDS | 40.0% |
| !!! | TGGTTTTGTGAAGACTGACA+CGG | + | chr7.3:4090142-4090161 | MS.gene072539:CDS | 40.0% |
| AAGTAGGTGGTAATACAGGG+TGG | - | chr7.3:4091058-4091077 | None:intergenic | 45.0% | |
| AATTGGAGACACAGATGTGG+GGG | + | chr7.3:4090600-4090619 | MS.gene072539:CDS | 45.0% | |
| ACTAGCAAGCTTTCTGCAGT+TGG | + | chr7.3:4091149-4091168 | MS.gene072539:CDS | 45.0% | |
| ACTGTCACTGTTGCATCTGT+TGG | + | chr7.3:4090304-4090323 | MS.gene072539:CDS | 45.0% | |
| AGTGTCCCAAATACCATCAG+AGG | - | chr7.3:4090804-4090823 | None:intergenic | 45.0% | |
| ATCAAAGTGGCCAATGGAAC+TGG | - | chr7.3:4089236-4089255 | None:intergenic | 45.0% | |
| CAAGTTTGGACAAGCTGGAT+TGG | + | chr7.3:4089298-4089317 | MS.gene072539:CDS | 45.0% | |
| CAATTGGAGACACAGATGTG+GGG | + | chr7.3:4090599-4090618 | MS.gene072539:CDS | 45.0% | |
| CCAGTCTATGATCAACTGTC+AGG | - | chr7.3:4090375-4090394 | None:intergenic | 45.0% | |
| CCTGACAGTTGATCATAGAC+TGG | + | chr7.3:4090372-4090391 | MS.gene072539:CDS | 45.0% | |
| CGATACCGCAAGATATCAAC+AGG | + | chr7.3:4090081-4090100 | MS.gene072539:CDS | 45.0% | |
| CTCTAGATCTTAGAGCTTCC+TGG | - | chr7.3:4090986-4091005 | None:intergenic | 45.0% | |
| CTGTCACTGTTGCATCTGTT+GGG | + | chr7.3:4090305-4090324 | MS.gene072539:CDS | 45.0% | |
| GACACGGAGTTTCAGAAGAA+GGG | + | chr7.3:4090158-4090177 | MS.gene072539:CDS | 45.0% | |
| GCATCCCTGTTGATATCTTG+CGG | - | chr7.3:4090089-4090108 | None:intergenic | 45.0% | |
| TCATACACAGGGGAAACTTC+TGG | + | chr7.3:4090247-4090266 | MS.gene072539:intron | 45.0% | |
| TCTAGATAGGCACAATCCAC+CGG | - | chr7.3:4090578-4090597 | None:intergenic | 45.0% | |
| TGACACGGAGTTTCAGAAGA+AGG | + | chr7.3:4090157-4090176 | MS.gene072539:CDS | 45.0% | |
| TGTCACTGTTGCATCTGTTG+GGG | + | chr7.3:4090306-4090325 | MS.gene072539:CDS | 45.0% | |
| ! | GTTCCATTGGCCACTTTGAT+TGG | + | chr7.3:4089236-4089255 | MS.gene072539:CDS | 45.0% |
| ! | TCTAAGATCTAGAGGCCTGA+AGG | + | chr7.3:4090992-4091011 | MS.gene072539:CDS | 45.0% |
| ! | TTTCCTCAGCTTTCAAGTGC+TGG | + | chr7.3:4090761-4090780 | MS.gene072539:intron | 45.0% |
| !! | AACTGCAGAAAGCTTGCTAG+TGG | - | chr7.3:4091150-4091169 | None:intergenic | 45.0% |
| !! | AAGCTTGCTAGTGGCTTTGT+TGG | - | chr7.3:4091141-4091160 | None:intergenic | 45.0% |
| !! | AGCCTTGTTTGCTTGCTTCA+TGG | + | chr7.3:4090190-4090209 | MS.gene072539:intron | 45.0% |
| !! | CAGATTTTTGACGGGCACAA+CGG | + | chr7.3:4090005-4090024 | MS.gene072539:intron | 45.0% |
| !! | CAGGAAGCTCTAAGATCTAG+AGG | + | chr7.3:4090984-4091003 | MS.gene072539:intron | 45.0% |
| AAACCAACAACTAGAGCGCG+AGG | - | chr7.3:4090128-4090147 | None:intergenic | 50.0% | |
| AACAACTAGAGCGCGAGGAA+GGG | - | chr7.3:4090123-4090142 | None:intergenic | 50.0% | |
| AAGACGGAAAACGCGGTTGA+TGG | - | chr7.3:4089383-4089402 | None:intergenic | 50.0% | |
| AATCTCGCGGCCAATCAAAG+TGG | - | chr7.3:4089249-4089268 | None:intergenic | 50.0% | |
| ATATGGCCGCCATGTCATGT+CGG | + | chr7.3:4090834-4090853 | MS.gene072539:CDS | 50.0% | |
| CTAGATAGGCACAATCCACC+GGG | - | chr7.3:4090577-4090596 | None:intergenic | 50.0% | |
| GAAGCCATCACCAGTTCCAT+TGG | + | chr7.3:4089223-4089242 | MS.gene072539:CDS | 50.0% | |
| GGCAGGTTGTATCATCCTTC+AGG | - | chr7.3:4091010-4091029 | None:intergenic | 50.0% | |
| GGTAATACAGGGTGGTCAGA+AGG | - | chr7.3:4091050-4091069 | None:intergenic | 50.0% | |
| TACCGCAAAGACGGAAAACG+CGG | - | chr7.3:4089390-4089409 | None:intergenic | 50.0% | |
| TGCTGCAAAGCTGGTGGTTA+AGG | + | chr7.3:4090874-4090893 | MS.gene072539:CDS | 50.0% | |
| ! | AACCGCGTTTTCCGTCTTTG+CGG | + | chr7.3:4089385-4089404 | MS.gene072539:CDS | 50.0% |
| !! | AGCTTTCAAGTGCTGGTGGA+AGG | + | chr7.3:4090768-4090787 | MS.gene072539:intron | 50.0% |
| !! | CAAGCTGGATTGGCCAAGAA+AGG | + | chr7.3:4089308-4089327 | MS.gene072539:CDS | 50.0% |
| !! | GCTTTCTGCAGTTGGTGTTG+TGG | + | chr7.3:4091157-4091176 | MS.gene072539:CDS | 50.0% |
| ACAGATTGCCACAGGGTTCC+CGG | + | chr7.3:4089353-4089372 | MS.gene072539:CDS | 55.0% | |
| AGGTAGACCCCGACATGACA+TGG | - | chr7.3:4090846-4090865 | None:intergenic | 55.0% | |
| CAACAACTAGAGCGCGAGGA+AGG | - | chr7.3:4090124-4090143 | None:intergenic | 55.0% | |
| CAACAGGGATGCATGGCTAC+AGG | + | chr7.3:4090097-4090116 | MS.gene072539:CDS | 55.0% | |
| CCACCAGCACTTGAAAGCTG+AGG | - | chr7.3:4090767-4090786 | None:intergenic | 55.0% | |
| CGGCCAATCAAAGTGGCCAA+TGG | - | chr7.3:4089242-4089261 | None:intergenic | 55.0% | |
| CTTCCTCGCGCTCTAGTTGT+TGG | + | chr7.3:4090122-4090141 | MS.gene072539:CDS | 55.0% | |
| GTGGCCAATGGAACTGGTGA+TGG | - | chr7.3:4089230-4089249 | None:intergenic | 55.0% | |
| TAGACCCCGACATGACATGG+CGG | - | chr7.3:4090843-4090862 | None:intergenic | 55.0% | |
| TATGGCCGCCATGTCATGTC+GGG | + | chr7.3:4090835-4090854 | MS.gene072539:CDS | 55.0% | |
| !! | AAACGCGGTTGATGGATCCC+CGG | - | chr7.3:4089375-4089394 | None:intergenic | 55.0% |
| !! | CCTCAGCTTTCAAGTGCTGG+TGG | + | chr7.3:4090764-4090783 | MS.gene072539:intron | 55.0% |
| AGATTGCCACAGGGTTCCCG+GGG | + | chr7.3:4089355-4089374 | MS.gene072539:CDS | 60.0% | |
| AGCTTTGCAGCAAGCTCCGC+AGG | - | chr7.3:4090866-4090885 | None:intergenic | 60.0% | |
| AGGTAGGTCCTCTTCGCTGC+TGG | + | chr7.3:4090551-4090570 | MS.gene072539:intron | 60.0% | |
| ATGGCCGCCATGTCATGTCG+GGG | + | chr7.3:4090836-4090855 | MS.gene072539:CDS | 60.0% | |
| CAGATTGCCACAGGGTTCCC+GGG | + | chr7.3:4089354-4089373 | MS.gene072539:CDS | 60.0% | |
| GTCATGTCGGGGTCTACCTG+CGG | + | chr7.3:4090847-4090866 | MS.gene072539:CDS | 60.0% | |
| TCGTCCTACTTCGCCACCAC+TGG | - | chr7.3:4090431-4090450 | None:intergenic | 60.0% | |
| ! | ACTGCCAGTGGTGGCGAAGT+AGG | + | chr7.3:4090424-4090443 | MS.gene072539:CDS | 60.0% |
| ! | AGGGAGCGTGTTACTGCCAG+TGG | + | chr7.3:4090412-4090431 | MS.gene072539:CDS | 60.0% |
| ! | GAGCGTGTTACTGCCAGTGG+TGG | + | chr7.3:4090415-4090434 | MS.gene072539:CDS | 60.0% |
| !! | AACGCGGTTGATGGATCCCC+GGG | - | chr7.3:4089374-4089393 | None:intergenic | 60.0% |
| !! | GGAGCTTGCTGCAAAGCTGG+TGG | + | chr7.3:4090868-4090887 | MS.gene072539:CDS | 60.0% |
| !! | TGCGGAGCTTGCTGCAAAGC+TGG | + | chr7.3:4090865-4090884 | MS.gene072539:CDS | 60.0% |
| ATGGATCCCCGGGAACCCTG+TGG | - | chr7.3:4089364-4089383 | None:intergenic | 65.0% | |
| GGTCCTCTTCGCTGCTGGCC+CGG | + | chr7.3:4090556-4090575 | MS.gene072539:CDS | 70.0% | |
| CCACCGGGCCAGCAGCGAAG+AGG | - | chr7.3:4090562-4090581 | None:intergenic | 75.0% | |
| CCTCTTCGCTGCTGGCCCGG+TGG | + | chr7.3:4090559-4090578 | MS.gene072539:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 4089197 | 4091271 | 4089197 | ID=MS.gene072539 |
| chr7.3 | mRNA | 4089197 | 4091271 | 4089197 | ID=MS.gene072539.t1;Parent=MS.gene072539 |
| chr7.3 | exon | 4089197 | 4089406 | 4089197 | ID=MS.gene072539.t1.exon1;Parent=MS.gene072539.t1 |
| chr7.3 | CDS | 4089197 | 4089406 | 4089197 | ID=cds.MS.gene072539.t1;Parent=MS.gene072539.t1 |
| chr7.3 | exon | 4090008 | 4090179 | 4090008 | ID=MS.gene072539.t1.exon2;Parent=MS.gene072539.t1 |
| chr7.3 | CDS | 4090008 | 4090179 | 4090008 | ID=cds.MS.gene072539.t1;Parent=MS.gene072539.t1 |
| chr7.3 | exon | 4090257 | 4090474 | 4090257 | ID=MS.gene072539.t1.exon3;Parent=MS.gene072539.t1 |
| chr7.3 | CDS | 4090257 | 4090474 | 4090257 | ID=cds.MS.gene072539.t1;Parent=MS.gene072539.t1 |
| chr7.3 | exon | 4090553 | 4090660 | 4090553 | ID=MS.gene072539.t1.exon4;Parent=MS.gene072539.t1 |
| chr7.3 | CDS | 4090553 | 4090660 | 4090553 | ID=cds.MS.gene072539.t1;Parent=MS.gene072539.t1 |
| chr7.3 | exon | 4090770 | 4090895 | 4090770 | ID=MS.gene072539.t1.exon5;Parent=MS.gene072539.t1 |
| chr7.3 | CDS | 4090770 | 4090895 | 4090770 | ID=cds.MS.gene072539.t1;Parent=MS.gene072539.t1 |
| chr7.3 | exon | 4090987 | 4091271 | 4090987 | ID=MS.gene072539.t1.exon6;Parent=MS.gene072539.t1 |
| chr7.3 | CDS | 4090987 | 4091271 | 4090987 | ID=cds.MS.gene072539.t1;Parent=MS.gene072539.t1 |
| Gene Sequence |
| Protein sequence |
