AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050741

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050741.t1 MTR_7g112350 98.496 532 8 0 1 532 1 532 0.0 1078
MS.gene050741.t1 MTR_1g083810 88.910 532 59 0 1 532 1 532 0.0 989
MS.gene050741.t1 MTR_2g034900 83.271 532 85 3 1 531 1 529 0.0 910
MS.gene050741.t1 MTR_4g121435 71.985 539 132 6 1 531 1 528 0.0 783
MS.gene050741.t1 MTR_4g131510 77.230 426 97 0 79 504 1 426 0.0 699
MS.gene050741.t1 MTR_4g133040 71.163 430 122 2 70 498 3 431 0.0 635
MS.gene050741.t1 MTR_4g133030 73.005 426 114 1 83 507 2 427 0.0 631
MS.gene050741.t1 MTR_8g027585 71.868 423 118 1 110 532 25 446 0.0 623
MS.gene050741.t1 MTR_4g131000 66.234 462 118 3 79 504 1 460 0.0 603
MS.gene050741.t1 MTR_4g132980 67.290 428 111 2 79 506 1 399 0.0 577
MS.gene050741.t1 MTR_4g127570 58.605 430 107 4 83 511 2 361 9.09e-164 472
MS.gene050741.t1 MTR_1g053470 66.768 328 93 4 208 532 1 315 1.56e-147 426
MS.gene050741.t1 MTR_1g053470 26.047 215 145 6 108 314 30 238 2.93e-11 65.1
MS.gene050741.t1 MTR_7g112150 47.399 519 250 12 1 499 1 516 4.60e-147 432
MS.gene050741.t1 MTR_1g053470 70.000 300 87 3 208 504 1 300 4.55e-143 414
MS.gene050741.t1 MTR_1g053470 26.047 215 145 6 108 314 30 238 2.77e-11 65.1
MS.gene050741.t1 MTR_1g053470 66.563 323 92 4 208 527 1 310 8.86e-143 416
MS.gene050741.t1 MTR_1g053470 26.047 215 145 6 108 314 30 238 9.57e-11 63.9
MS.gene050741.t1 MTR_4g132980 68.403 288 74 1 219 506 1 271 5.11e-134 392
MS.gene050741.t1 MTR_4g013265 50.708 424 96 7 110 532 11 322 2.76e-128 377
MS.gene050741.t1 MTR_7g112160 43.725 510 246 13 14 504 15 502 1.01e-111 342
MS.gene050741.t1 MTR_7g113400 46.489 413 200 10 14 408 15 424 8.01e-102 313
MS.gene050741.t1 MTR_4g132960 63.684 190 52 1 318 507 3 175 1.09e-71 228
MS.gene050741.t1 MTR_4g132967 58.421 190 45 1 318 507 7 162 1.36e-62 204
MS.gene050741.t1 MTR_1g066760 30.116 518 317 15 14 499 10 514 1.25e-53 189
MS.gene050741.t1 MTR_4g124270 33.146 178 82 5 119 290 11 157 7.60e-18 81.6
MS.gene050741.t1 MTR_4g124270 61.017 59 23 0 323 381 64 122 4.68e-15 73.6
MS.gene050741.t1 MTR_7g113402 47.253 91 33 3 420 508 22 99 1.98e-14 69.7
MS.gene050741.t1 MTR_7g059405 27.519 258 180 6 135 392 376 626 5.82e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050741.t1 AT4G16143 80.224 536 99 2 1 531 1 534 0.0 868
MS.gene050741.t1 AT4G16143 80.224 536 99 2 1 531 1 534 0.0 868
MS.gene050741.t1 AT3G06720 79.252 535 105 4 1 532 1 532 0.0 864
MS.gene050741.t1 AT3G06720 79.252 535 105 4 1 532 1 532 0.0 864
MS.gene050741.t1 AT1G09270 73.383 541 130 6 1 531 1 537 0.0 785
MS.gene050741.t1 AT1G09270 73.383 541 130 6 1 531 1 537 0.0 785
MS.gene050741.t1 AT1G02690 69.630 540 152 5 1 531 1 537 0.0 771
MS.gene050741.t1 AT1G02690 69.501 541 152 6 1 531 1 538 0.0 766
MS.gene050741.t1 AT4G02150 70.315 539 143 5 1 531 1 530 0.0 761
MS.gene050741.t1 AT1G09270 77.193 456 99 3 79 531 2 455 0.0 705
MS.gene050741.t1 AT5G49310 63.872 501 174 4 1 501 1 494 0.0 633
MS.gene050741.t1 AT3G05720 64.300 493 157 6 13 497 9 490 0.0 613
MS.gene050741.t1 AT3G05720 64.300 493 157 6 13 497 9 490 0.0 613
MS.gene050741.t1 AT4G02150 71.325 415 106 3 1 408 1 409 0.0 603
MS.gene050741.t1 AT5G52000 52.381 420 187 6 79 497 14 421 1.12e-143 421
MS.gene050741.t1 AT5G49305 42.691 431 186 9 78 502 2 377 4.98e-100 307
MS.gene050741.t1 AT5G49305 42.691 431 186 9 78 502 2 377 4.98e-100 307
MS.gene050741.t1 AT5G49305 42.691 431 186 9 78 502 2 377 4.98e-100 307
MS.gene050741.t1 AT5G49305 42.691 431 186 9 78 502 2 377 4.98e-100 307
MS.gene050741.t1 AT5G49305 42.691 431 186 9 78 502 2 377 4.98e-100 307
MS.gene050741.t1 AT1G32880 63.265 147 49 3 363 507 40 183 8.39e-56 185
MS.gene050741.t1 AT5G03070 28.958 518 323 12 14 499 10 514 1.24e-51 184

Find 145 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGTTCCTGCCGTGCCTTC+TGG 0.268271 7.2:-4527700 MS.gene050741:CDS
TGGGAACAAGCAACAGATTC+AGG 0.277528 7.2:-4528376 MS.gene050741:intron
GTGATTGATGCCAGTATAAT+TGG 0.305012 7.2:-4528263 MS.gene050741:CDS
CCAGGTGATGCTTCTCAATC+AGG 0.305394 7.2:-4527742 MS.gene050741:CDS
CACCTACCAGCCTTGGTTAC+AGG 0.310563 7.2:-4531103 MS.gene050741:CDS
ATCTAATCTACTCGAGAAAA+AGG 0.313044 7.2:-4531723 MS.gene050741:intron
GATTGACGAAGCTGAGGGTT+TGG 0.332266 7.2:-4527869 MS.gene050741:CDS
AGGGCTTGAAAACATCTTAA+AGG 0.333351 7.2:-4527950 MS.gene050741:CDS
TTTCTTCCCTCCGATTCTTC+CGG 0.351570 7.2:+4531804 None:intergenic
TGCCAGTATAATTGGTCCTT+TGG 0.355834 7.2:-4528255 MS.gene050741:CDS
GTTTCTGAGCATAGAAAGTT+TGG 0.355939 7.2:+4530100 None:intergenic
CAATCAGGGTTCAACTTTGG+TGG 0.368535 7.2:-4527727 MS.gene050741:CDS
TGTCAGGCCGTGTGGGCATT+GGG 0.369223 7.2:-4530212 MS.gene050741:intron
AGACTTCTTCATCATTTGAA+TGG 0.376843 7.2:+4529278 None:intergenic
GCATCAAGAAGGAAGCTTGC+TGG 0.387204 7.2:-4528419 MS.gene050741:CDS
CTGTCAGGCCGTGTGGGCAT+TGG 0.388924 7.2:-4530213 MS.gene050741:intron
GCTTTGACAAATATAGCTTC+TGG 0.398936 7.2:-4530725 MS.gene050741:CDS
CAGCCTTGGTTACAGGAATC+TGG 0.399141 7.2:-4531096 MS.gene050741:CDS
TCGGTTCTCGCGTTTGCGTT+AGG 0.408259 7.2:+4531905 None:intergenic
TGGAGCTTTGCTTCCTCTGT+TGG 0.414916 7.2:-4530141 MS.gene050741:CDS
TAGTGATGATGTTCGTGAAC+AGG 0.421824 7.2:-4530630 MS.gene050741:intron
ATTGTGACAGTTTGTCTTGA+AGG 0.422808 7.2:-4527970 MS.gene050741:CDS
AGATGCCGTGATCTTGTTCT+CGG 0.423165 7.2:-4530167 MS.gene050741:CDS
TTTCGGAAGTTGCTTTCAAT+TGG 0.424061 7.2:-4531034 MS.gene050741:intron
TTGAGGCAACAACTCAGTTT+CGG 0.428701 7.2:-4531051 MS.gene050741:CDS
AAGATATGAAAGTGCCCAAC+AGG 0.430566 7.2:+4529246 None:intergenic
TCTCAATCAGGGTTCAACTT+TGG 0.432782 7.2:-4527730 MS.gene050741:CDS
TGAAGATTCTCGAGACATAC+TGG 0.452976 7.2:-4527792 MS.gene050741:CDS
GACCAAAGGACCAATTATAC+TGG 0.463096 7.2:+4528253 None:intergenic
CAACACTGAGATTTATGAAA+AGG 0.463560 7.2:-4527818 MS.gene050741:CDS
CTGGCAAGTGCAGGAAGTGC+AGG 0.465783 7.2:+4529307 None:intergenic
GCACTTTCATATCTTTCTGA+TGG 0.469094 7.2:-4529238 MS.gene050741:CDS
AGTCTTGACTGATGCCTGTT+GGG 0.470829 7.2:-4529260 MS.gene050741:CDS
GTTGTAGTTTGAGGCAGCAT+GGG 0.471388 7.2:-4530747 MS.gene050741:intron
AGACAAACTGTCACAATCCT+AGG 0.471935 7.2:+4527976 None:intergenic
TGGGCATTGGGAAATGTTGC+TGG 0.473260 7.2:-4530200 MS.gene050741:CDS
GGACACTCTCAAACTTCTGC+AGG 0.478892 7.2:-4530070 MS.gene050741:CDS
TTTCCAACTGTGCGTAGAGC+AGG 0.479185 7.2:+4529031 None:intergenic
CGTGATCTTGTTCTCGGTCA+TGG 0.484918 7.2:-4530161 MS.gene050741:CDS
TGATAATAACATGCAGTTTG+AGG 0.493472 7.2:-4531068 MS.gene050741:CDS
TTGTGACAGTTTGTCTTGAA+GGG 0.493627 7.2:-4527969 MS.gene050741:CDS
TACTCACATGTCCTGATCCT+AGG 0.494731 7.2:-4527993 MS.gene050741:CDS
CAGATTCCTGTAACCAAGGC+TGG 0.496109 7.2:+4531097 None:intergenic
ATCATTTGAATGGATGAGAC+TGG 0.497906 7.2:+4529288 None:intergenic
ATCAAGAGGTTCTTAAGAGA+AGG 0.500451 7.2:+4528459 None:intergenic
TTGAAGCTGGTGTCTGTAGC+CGG 0.506023 7.2:-4529189 MS.gene050741:CDS
GCATCACTGATGGCGTGAAT+CGG 0.506234 7.2:-4527903 MS.gene050741:CDS
CAGGTGATGCTTCTCAATCA+GGG 0.510659 7.2:-4527741 MS.gene050741:CDS
TGGTTGAGATCCGGAAGAAT+CGG 0.510945 7.2:-4531814 MS.gene050741:CDS
CTTGAAAACATCTTAAAGGT+AGG 0.512889 7.2:-4527946 MS.gene050741:CDS
AGGATAACTTGGTTGAGATC+CGG 0.514824 7.2:-4531823 MS.gene050741:CDS
TAATGCACCCTTGACTTACC+AGG 0.515624 7.2:+4528031 None:intergenic
GGTGCAAATGACAAAATTCA+AGG 0.516277 7.2:-4529217 MS.gene050741:CDS
CCTGATTGAGAAGCATCACC+TGG 0.519394 7.2:+4527742 None:intergenic
TTGAAAACATCTTAAAGGTA+GGG 0.520099 7.2:-4527945 MS.gene050741:CDS
ACAATTTCGAACATCACAGC+TGG 0.521802 7.2:-4528396 MS.gene050741:CDS
GGAATAAGCACAGAAGGAGA+TGG 0.522068 7.2:+4529052 None:intergenic
AGTCCAGATTCCTGTAACCA+AGG 0.523005 7.2:+4531093 None:intergenic
AAAATTGGTCGACAGGTACC+TGG 0.523379 7.2:-4528049 MS.gene050741:intron
GGCAATCTCAAATGCTACAT+CGG 0.524735 7.2:-4528183 MS.gene050741:CDS
GTGGCGGTTGATGCGGAAGA+AGG 0.528330 7.2:-4531860 MS.gene050741:CDS
AGAACGTAGCCCACCGATTG+AGG 0.529104 7.2:-4530920 MS.gene050741:CDS
ACCTGATCAAAAGCAGGTTG+TGG 0.529289 7.2:+4530041 None:intergenic
GCAATCTCAAATGCTACATC+GGG 0.530239 7.2:-4528182 MS.gene050741:CDS
ATATCAAGAAGGAAGCTGCC+TGG 0.530844 7.2:-4528205 MS.gene050741:CDS
GCTTGTATAACCTCCTCAAT+CGG 0.530974 7.2:+4530907 None:intergenic
AGATTAGATTGAACTGATGC+AGG 0.532270 7.2:+4531737 None:intergenic
GTTCCTGCCGTGCCTTCTGG+TGG 0.536067 7.2:-4527697 MS.gene050741:CDS
TCTCAGTGTTGTCATGACTC+TGG 0.536088 7.2:+4527830 None:intergenic
TGTTGTAGTTTGAGGCAGCA+TGG 0.536379 7.2:-4530748 MS.gene050741:intron
GATGACGAGGCTATGCCTCC+AGG 0.538922 7.2:-4527760 MS.gene050741:CDS
ACTGTCACAATCCTAGGATC+AGG 0.541962 7.2:+4527982 None:intergenic
GTTGGAACACCTACCAGCCT+TGG 0.541974 7.2:-4531110 MS.gene050741:CDS
AGAACAAGATCACGGCATCT+AGG 0.541982 7.2:+4530170 None:intergenic
CTTTATACCTGATCAAAAGC+AGG 0.544346 7.2:+4530035 None:intergenic
AAACACTAAGGTAGTAATTG+AGG 0.546623 7.2:-4530693 MS.gene050741:CDS
TATCAAGAAGGAAGCTGCCT+GGG 0.546647 7.2:-4528204 MS.gene050741:CDS
AGAAGGTCGGAGACGGAGAG+AGG 0.547856 7.2:-4531843 MS.gene050741:CDS
TGTGGACTGTCAGGCCGTGT+GGG 0.549793 7.2:-4530219 MS.gene050741:intron
AATCCACCAGAAGGCACGGC+AGG 0.551892 7.2:+4527694 None:intergenic
GTATCGATTCCGACGAACCT+CGG 0.552883 7.2:+4531886 None:intergenic
AGAAGGCACGGCAGGAACAT+CGG 0.557422 7.2:+4527702 None:intergenic
GAGACGGAGAGAGGATAACT+TGG 0.560975 7.2:-4531834 MS.gene050741:CDS
ATTCCTGCTCTACGCACAGT+TGG 0.563062 7.2:-4529034 MS.gene050741:CDS
ATTCAAGGCGTAATTGAAGC+TGG 0.564008 7.2:-4529202 MS.gene050741:CDS
ATCTCAAATGCTACATCGGG+TGG 0.565698 7.2:-4528179 MS.gene050741:CDS
TGAAAACATCTTAAAGGTAG+GGG 0.566752 7.2:-4527944 MS.gene050741:CDS
AGAGCAGGAATAAGCACAGA+AGG 0.573010 7.2:+4529046 None:intergenic
ATGCGGAAGAAGGTCGGAGA+CGG 0.573816 7.2:-4531850 MS.gene050741:CDS
ATTGAGGAGGTTATACAAGC+TGG 0.574779 7.2:-4530904 MS.gene050741:CDS
GACAGGTACCTGGTAAGTCA+AGG 0.575549 7.2:-4528039 MS.gene050741:intron
AAGAAAGCTTGCAGAAGAAG+AGG 0.576091 7.2:-4531787 MS.gene050741:CDS
TTGCAGAAGAAGAGGCGTGA+AGG 0.577170 7.2:-4531779 MS.gene050741:CDS
AAGATAATAACCTGCAGCTG+TGG 0.578665 7.2:+4530838 None:intergenic
GACACTCTCAAACTTCTGCA+GGG 0.582716 7.2:-4530069 MS.gene050741:CDS
ATTCACGCCATCAGTGATGC+CGG 0.582855 7.2:+4527906 None:intergenic
GATTCTCGAGACATACTGGT+TGG 0.583097 7.2:-4527788 MS.gene050741:CDS
CGGTTGATGCGGAAGAAGGT+CGG 0.583578 7.2:-4531856 MS.gene050741:CDS
AAGTCTTGACTGATGCCTGT+TGG 0.583997 7.2:-4529261 MS.gene050741:CDS
TGTAGCATTTGAGATTGCCC+AGG 0.585756 7.2:+4528187 None:intergenic
TGGAACATCTGAAAACACTA+AGG 0.585901 7.2:-4530705 MS.gene050741:CDS
TGGATGAGACTGGCAAGTGC+AGG 0.586919 7.2:+4529298 None:intergenic
GTGTGGACTGTCAGGCCGTG+TGG 0.587261 7.2:-4530220 MS.gene050741:intron
GTTGAATCCACCAGAAGGCA+CGG 0.589872 7.2:+4527690 None:intergenic
TCTCGAGACATACTGGTTGG+AGG 0.590172 7.2:-4527785 MS.gene050741:CDS
GAATAAGCACAGAAGGAGAT+GGG 0.590390 7.2:+4529053 None:intergenic
ACAGTTGGAAATATTGTCAC+TGG 0.591504 7.2:-4529019 MS.gene050741:CDS
GGTTCGTCGGAATCGATACA+AGG 0.595021 7.2:-4531882 MS.gene050741:CDS
ACGCGAGAACCGAGGTTCGT+CGG 0.595335 7.2:-4531895 MS.gene050741:CDS
TGTATAACCTCCTCAATCGG+TGG 0.596128 7.2:+4530910 None:intergenic
TGCTGAGTTTGATATCAAGA+AGG 0.598148 7.2:-4528216 MS.gene050741:CDS
CAGTGTTGTCATGACTCTGG+AGG 0.600196 7.2:+4527833 None:intergenic
AACATTTCCCAATGCCCACA+CGG 0.600269 7.2:+4530205 None:intergenic
ATACAAGGTGGCGGTTGATG+CGG 0.609006 7.2:-4531867 MS.gene050741:CDS
GTATAACCTCCTCAATCGGT+GGG 0.609405 7.2:+4530911 None:intergenic
TTGAGATCCGGAAGAATCGG+AGG 0.610209 7.2:-4531811 MS.gene050741:CDS
ACAGTAGAAGCTCAACAAGC+CGG 0.611612 7.2:+4529170 None:intergenic
ACTAAGGTAGTAATTGAGGC+AGG 0.612619 7.2:-4530689 MS.gene050741:CDS
ACTGATGCAGGCATCTGCTG+AGG 0.637302 7.2:+4531749 None:intergenic
CTGGTTGGAGGAAGATGACG+AGG 0.640896 7.2:-4527773 MS.gene050741:CDS
TAAGAGAAGGAAGAACTCGA+TGG 0.641399 7.2:+4528472 None:intergenic
ACAGGTACCTGGTAAGTCAA+GGG 0.643325 7.2:-4528038 MS.gene050741:intron
CAATTTCGAACATCACAGCT+GGG 0.644095 7.2:-4528395 MS.gene050741:CDS
ACATGTGAGTAGATCACACA+AGG 0.644923 7.2:+4528005 None:intergenic
TGAGATGATTGACGAAGCTG+AGG 0.646164 7.2:-4527875 MS.gene050741:CDS
TTCCTGTAACCAAGGCTGGT+AGG 0.648193 7.2:+4531101 None:intergenic
TGGAGATGACTTGCAGACAC+AGG 0.648488 7.2:-4528999 MS.gene050741:intron
CTATGCTCAGAAACGCCACA+TGG 0.649323 7.2:-4530091 MS.gene050741:CDS
TCATTCAATTGCGCCAACAG+AGG 0.649416 7.2:+4530128 None:intergenic
TGTTCACGAACATCATCACT+AGG 0.652458 7.2:+4530632 None:intergenic
CATCATCACTAGGAGAAGCA+AGG 0.654239 7.2:+4530642 None:intergenic
ACACTCTCAAACTTCTGCAG+GGG 0.658228 7.2:-4530068 MS.gene050741:CDS
TTAAAGTTGAATCCACCAGA+AGG 0.661830 7.2:+4527685 None:intergenic
TCGGAATCGATACAAGGTGG+CGG 0.663630 7.2:-4531876 MS.gene050741:CDS
TGAGATCCGGAAGAATCGGA+GGG 0.664863 7.2:-4531810 MS.gene050741:CDS
ACGTAGCCCACCGATTGAGG+AGG 0.667976 7.2:-4530917 MS.gene050741:CDS
CATGACCGAGAACAAGATCA+CGG 0.670358 7.2:+4530162 None:intergenic
TAACGCAAACGCGAGAACCG+AGG 0.690745 7.2:-4531903 MS.gene050741:CDS
GAGATGATTGACGAAGCTGA+GGG 0.695713 7.2:-4527874 MS.gene050741:CDS
TAAGCACAGAAGGAGATGGG+TGG 0.711417 7.2:+4529056 None:intergenic
GATTGAGAAGCATCACCTGG+AGG 0.716664 7.2:+4527745 None:intergenic
ATCAAGAACTCAATAAAACG+AGG 0.733523 7.2:+4530874 None:intergenic
TCGTCGGAATCGATACAAGG+TGG 0.735526 7.2:-4531879 MS.gene050741:CDS
CATGTGAGTAGATCACACAA+GGG 0.757129 7.2:+4528006 None:intergenic
GAAGTTTGAGAGTGTCCATG+TGG 0.759250 7.2:+4530076 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTTTATATTGAAAAATTA+TGG - chr7.2:4529874-4529893 MS.gene050741:intron 10.0%
!!! TAATAATTGATTCTTAATAT+CGG - chr7.2:4530229-4530248 MS.gene050741:intron 10.0%
!!! TATTATTTTACTTTTGATTT+TGG - chr7.2:4531062-4531081 MS.gene050741:CDS 10.0%
!!! TGAAATTCTAATTATTATTT+TGG - chr7.2:4530509-4530528 MS.gene050741:intron 10.0%
!!! TTTTGTATACAATTTTTTAA+GGG - chr7.2:4528625-4528644 MS.gene050741:intron 10.0%
!!! TTTTTGTATACAATTTTTTA+AGG - chr7.2:4528624-4528643 MS.gene050741:intron 10.0%
!! AATAAGAAAATTCAAACAAA+TGG + chr7.2:4529790-4529809 None:intergenic 15.0%
!! CAGATATAAACAAATATTAA+AGG + chr7.2:4529737-4529756 None:intergenic 15.0%
!!! TGTCATAATCTTTTTAAAAT+TGG - chr7.2:4531534-4531553 MS.gene050741:intron 15.0%
!!! TTTTATAACTATTAATCAAG+AGG + chr7.2:4531156-4531175 None:intergenic 15.0%
!! ACAAGGTTTGATTAATATTA+TGG - chr7.2:4528419-4528438 MS.gene050741:CDS 20.0%
!! ACTTCATTAACAAAAAAAGA+AGG + chr7.2:4529086-4529105 None:intergenic 20.0%
!! CTATTGCATAAAATAAAACA+AGG + chr7.2:4528786-4528805 None:intergenic 20.0%
!! CTTCATTAACAAAAAAAGAA+GGG + chr7.2:4529085-4529104 None:intergenic 20.0%
!! TGAAATTAAAATTAAACGCA+TGG - chr7.2:4530729-4530748 MS.gene050741:CDS 20.0%
!! TTAAAAAGATTATGACATCT+CGG + chr7.2:4531531-4531550 None:intergenic 20.0%
!!! AATTGAGAAATTGATAATAC+TGG - chr7.2:4527976-4527995 MS.gene050741:CDS 20.0%
!!! ACCATATAAATTTTACTGAT+AGG + chr7.2:4529039-4529058 None:intergenic 20.0%
!!! ATGGTTTCTTACTTTTTATT+GGG - chr7.2:4529054-4529073 MS.gene050741:CDS 20.0%
!!! CAAAATTGATGATAGTAATT+AGG - chr7.2:4528105-4528124 MS.gene050741:intron 20.0%
!!! TATGGTTTCTTACTTTTTAT+TGG - chr7.2:4529053-4529072 MS.gene050741:CDS 20.0%
!!! TGATAATTTTTCAACATACA+AGG + chr7.2:4529835-4529854 None:intergenic 20.0%
!!! TTATAAAAAAAGCATCAAGA+AGG - chr7.2:4531168-4531187 MS.gene050741:intron 20.0%
!!! TTTTTGTTAATGAAGTTAAC+CGG - chr7.2:4529090-4529109 MS.gene050741:intron 20.0%
! AACGTAGTAAAGTAGAAAAT+CGG + chr7.2:4527939-4527958 None:intergenic 25.0%
! AATTAAAATTAAACGCATGG+AGG - chr7.2:4530732-4530751 MS.gene050741:CDS 25.0%
! ACAACACAGGTTAAATAATA+TGG + chr7.2:4529982-4530001 None:intergenic 25.0%
! CTTGATTCTTGAAAATTTAC+AGG - chr7.2:4531310-4531329 MS.gene050741:intron 25.0%
! GCCTATCAGTAAAATTTATA+TGG - chr7.2:4529035-4529054 MS.gene050741:CDS 25.0%
! GGTTTGATTAATATTATGGT+AGG - chr7.2:4528423-4528442 MS.gene050741:CDS 25.0%
! TGAATCAAAACAACATAAAC+AGG + chr7.2:4528139-4528158 None:intergenic 25.0%
! TTGAAAACATCTTAAAGGTA+GGG - chr7.2:4531653-4531672 MS.gene050741:intron 25.0%
!! AGAACTTGAACTAGAAATTT+TGG - chr7.2:4529709-4529728 MS.gene050741:intron 25.0%
!! ATATATTGATAGTAGCGATT+AGG - chr7.2:4528014-4528033 MS.gene050741:CDS 25.0%
!! GAAATTGATAATACTGGATT+AGG - chr7.2:4527982-4528001 MS.gene050741:CDS 25.0%
!! TTTTATTGAGTTCTTGATGA+GGG - chr7.2:4528729-4528748 MS.gene050741:intron 25.0%
!!! AAATTTCTAGTTCAAGTTCT+AGG + chr7.2:4529709-4529728 None:intergenic 25.0%
!!! ACAATTTTTTAAGGGACATT+TGG - chr7.2:4528633-4528652 MS.gene050741:intron 25.0%
!!! AGCAGTGTTTGTTAATTTTA+AGG - chr7.2:4528305-4528324 MS.gene050741:intron 25.0%
!!! GCAGTGTTTGTTAATTTTAA+GGG - chr7.2:4528306-4528325 MS.gene050741:intron 25.0%
!!! GTTCACTTTGATTTTAGATT+TGG - chr7.2:4529145-4529164 MS.gene050741:intron 25.0%
!!! TGATTTTGGTTTGTGTTAAT+GGG - chr7.2:4531076-4531095 MS.gene050741:CDS 25.0%
!!! TTGATTTTGGTTTGTGTTAA+TGG - chr7.2:4531075-4531094 MS.gene050741:CDS 25.0%
AAACACTAAGGTAGTAATTG+AGG - chr7.2:4528905-4528924 MS.gene050741:intron 30.0%
AAATGAAGCATAACAAGTAG+GGG + chr7.2:4528278-4528297 None:intergenic 30.0%
AACATGTTCATGATATTCAC+TGG - chr7.2:4528356-4528375 MS.gene050741:intron 30.0%
AATAAAGGTGGTCAAATTTG+TGG - chr7.2:4529942-4529961 MS.gene050741:intron 30.0%
AATTGAGAAATTGATACTGC+TGG - chr7.2:4528039-4528058 MS.gene050741:intron 30.0%
ACACAAGTATAAAGTCCATT+TGG - chr7.2:4529654-4529673 MS.gene050741:intron 30.0%
ACTACGTTGGATAAGTTATT+AGG - chr7.2:4527951-4527970 MS.gene050741:CDS 30.0%
AGACTTCTTCATCATTTGAA+TGG + chr7.2:4530323-4530342 None:intergenic 30.0%
AGAGAAATAGTAATACACAC+TGG - chr7.2:4530688-4530707 MS.gene050741:CDS 30.0%
ATAAAACCAACAAAATCACC+AGG + chr7.2:4531494-4531513 None:intergenic 30.0%
ATCAAGAACTCAATAAAACG+AGG + chr7.2:4528727-4528746 None:intergenic 30.0%
ATCTAATCTACTCGAGAAAA+AGG - chr7.2:4527875-4527894 MS.gene050741:CDS 30.0%
ATCTGTGTTATCTTTGCATT+TGG - chr7.2:4531267-4531286 MS.gene050741:intron 30.0%
CAAATGAAGCATAACAAGTA+GGG + chr7.2:4528279-4528298 None:intergenic 30.0%
CAACACTGAGATTTATGAAA+AGG - chr7.2:4531780-4531799 MS.gene050741:CDS 30.0%
CAGGGAACATTGTAAATTTA+AGG + chr7.2:4531475-4531494 None:intergenic 30.0%
CTTAAATTTACAATGTTCCC+TGG - chr7.2:4531473-4531492 MS.gene050741:intron 30.0%
CTTGAAAACATCTTAAAGGT+AGG - chr7.2:4531652-4531671 MS.gene050741:intron 30.0%
GCGAATTATAATGAGGAAAT+TGG + chr7.2:4530867-4530886 None:intergenic 30.0%
TAAAACCAACAAAATCACCA+GGG + chr7.2:4531493-4531512 None:intergenic 30.0%
TAGTGGCATCTTGTAAATAA+AGG - chr7.2:4529927-4529946 MS.gene050741:intron 30.0%
TCAAATGAAGCATAACAAGT+AGG + chr7.2:4528280-4528299 None:intergenic 30.0%
TGAAAACATCTTAAAGGTAG+GGG - chr7.2:4531654-4531673 MS.gene050741:intron 30.0%
TGACAAAGCGAATTATAATG+AGG + chr7.2:4530874-4530893 None:intergenic 30.0%
TGATAATAACATGCAGTTTG+AGG - chr7.2:4528530-4528549 MS.gene050741:intron 30.0%
TTACTGTATGTTGTAGTTTG+AGG - chr7.2:4528842-4528861 MS.gene050741:intron 30.0%
TTCTATTGCTGCTAATCATA+AGG + chr7.2:4531008-4531027 None:intergenic 30.0%
! AATTTGTGGTTTGTATGTGA+AGG - chr7.2:4529956-4529975 MS.gene050741:intron 30.0%
! GATTTTCTACTTTACTACGT+TGG - chr7.2:4527938-4527957 MS.gene050741:CDS 30.0%
!! GTTTTATTGAGTTCTTGATG+AGG - chr7.2:4528728-4528747 MS.gene050741:intron 30.0%
!!! GATTTTGGTTTGTGTTAATG+GGG - chr7.2:4531077-4531096 MS.gene050741:CDS 30.0%
!!! TCTTTTTAAAATTGGTCGAC+AGG - chr7.2:4531542-4531561 MS.gene050741:intron 30.0%
AAGTCCATTTGGTACACAAA+TGG - chr7.2:4529665-4529684 MS.gene050741:intron 35.0%
ACAGTTGGAAATATTGTCAC+TGG - chr7.2:4530579-4530598 MS.gene050741:intron 35.0%
AGATTAGATTGAACTGATGC+AGG + chr7.2:4527864-4527883 None:intergenic 35.0%
AGGAAATTTGTGCAATTGGA+CGG + chr7.2:4530930-4530949 None:intergenic 35.0%
AGGGCTTGAAAACATCTTAA+AGG - chr7.2:4531648-4531667 MS.gene050741:intron 35.0%
AGTCAGCAAAACAAAAAGAC+TGG + chr7.2:4530193-4530212 None:intergenic 35.0%
AGTCCATTTGGTACACAAAT+GGG - chr7.2:4529666-4529685 MS.gene050741:intron 35.0%
AGTGCAACAGAATATACACA+TGG + chr7.2:4530967-4530986 None:intergenic 35.0%
ATCAAGAGGTTCTTAAGAGA+AGG + chr7.2:4531142-4531161 None:intergenic 35.0%
ATCATTTGAATGGATGAGAC+TGG + chr7.2:4530313-4530332 None:intergenic 35.0%
ATGAGATAGATCACACTAGA+TGG + chr7.2:4529332-4529351 None:intergenic 35.0%
ATTGTGACAGTTTGTCTTGA+AGG - chr7.2:4531628-4531647 MS.gene050741:intron 35.0%
CAAAAAGACTGGTAAAACCA+AGG + chr7.2:4530182-4530201 None:intergenic 35.0%
CACACAGATGAGTAATTACA+AGG - chr7.2:4529623-4529642 MS.gene050741:intron 35.0%
CTTTATACCTGATCAAAAGC+AGG + chr7.2:4529566-4529585 None:intergenic 35.0%
GAAATTGATACTGCTGGATT+AGG - chr7.2:4528045-4528064 MS.gene050741:intron 35.0%
GCACTTTCATATCTTTCTGA+TGG - chr7.2:4530360-4530379 MS.gene050741:intron 35.0%
GCTTTGACAAATATAGCTTC+TGG - chr7.2:4528873-4528892 MS.gene050741:intron 35.0%
GGTGCAAATGACAAAATTCA+AGG - chr7.2:4530381-4530400 MS.gene050741:intron 35.0%
GTGATTGATGCCAGTATAAT+TGG - chr7.2:4531335-4531354 MS.gene050741:intron 35.0%
GTTTCTGAGCATAGAAAGTT+TGG + chr7.2:4529501-4529520 None:intergenic 35.0%
TATTGCTGCTAATCATAAGG+AGG + chr7.2:4531005-4531024 None:intergenic 35.0%
TCTCATGAACAACTCAAGTA+TGG - chr7.2:4531443-4531462 MS.gene050741:intron 35.0%
TGAGAGGAAATTTGTGCAAT+TGG + chr7.2:4530934-4530953 None:intergenic 35.0%
TGCTGAGTTTGATATCAAGA+AGG - chr7.2:4531382-4531401 MS.gene050741:intron 35.0%
TGGAACATCTGAAAACACTA+AGG - chr7.2:4528893-4528912 MS.gene050741:intron 35.0%
TGGCATCTTGTAAATAAAGG+TGG - chr7.2:4529930-4529949 MS.gene050741:intron 35.0%
TGTTGTTATCATTCTGCAGT+TGG - chr7.2:4528470-4528489 MS.gene050741:CDS 35.0%
TTAAAGTTGAATCCACCAGA+AGG + chr7.2:4531916-4531935 None:intergenic 35.0%
TTACTGATAGGCAAAAACCA+AGG + chr7.2:4529027-4529046 None:intergenic 35.0%
TTGTGACAGTTTGTCTTGAA+GGG - chr7.2:4531629-4531648 MS.gene050741:intron 35.0%
TTGTTAATGAAGTTAACCGG+AGG - chr7.2:4529093-4529112 MS.gene050741:intron 35.0%
! TTTCGGAAGTTGCTTTCAAT+TGG - chr7.2:4528564-4528583 MS.gene050741:intron 35.0%
!! GTATGCTGTTTCTAGATTCT+AGG - chr7.2:4529171-4529190 MS.gene050741:intron 35.0%
!! TTTCAACATACAAGGTGTTG+AGG + chr7.2:4529827-4529846 None:intergenic 35.0%
!!! TTTTGAAGCAAGTTGACCAA+AGG + chr7.2:4531362-4531381 None:intergenic 35.0%
AACAGCCTCTTGTGTATAAC+AGG - chr7.2:4530037-4530056 MS.gene050741:intron 40.0%
AACATCTTTCCTGTGTTGTG+TGG - chr7.2:4529361-4529380 MS.gene050741:intron 40.0%
AAGAAAGCTTGCAGAAGAAG+AGG - chr7.2:4527811-4527830 MS.gene050741:CDS 40.0%
AAGACTGGTAAAACCAAGGA+TGG + chr7.2:4530178-4530197 None:intergenic 40.0%
AAGATAATAACCTGCAGCTG+TGG + chr7.2:4528763-4528782 None:intergenic 40.0%
AAGCCCATTTGTGTACCAAA+TGG + chr7.2:4529672-4529691 None:intergenic 40.0%
ACAATTTCGAACATCACAGC+TGG - chr7.2:4531202-4531221 MS.gene050741:intron 40.0%
ACAGCCTCTTGTGTATAACA+GGG - chr7.2:4530038-4530057 MS.gene050741:intron 40.0%
ACATGTGAGTAGATCACACA+AGG + chr7.2:4531596-4531615 None:intergenic 40.0%
ACATTGCCTTGCAATAGTGT+TGG - chr7.2:4529305-4529324 MS.gene050741:CDS 40.0%
ACCAAGGCACAAATTGCATA+AGG + chr7.2:4529011-4529030 None:intergenic 40.0%
ACCTTATGCAATTTGTGCCT+TGG - chr7.2:4529007-4529026 MS.gene050741:CDS 40.0%
ACCTTGTAGCTACATACAGA+TGG + chr7.2:4528406-4528425 None:intergenic 40.0%
ACTAAGGTAGTAATTGAGGC+AGG - chr7.2:4528909-4528928 MS.gene050741:intron 40.0%
AGAAACTGTGAAGGAGATAG+TGG + chr7.2:4530904-4530923 None:intergenic 40.0%
AGACAAACTGTCACAATCCT+AGG + chr7.2:4531625-4531644 None:intergenic 40.0%
AGGATAACTTGGTTGAGATC+CGG - chr7.2:4527775-4527794 MS.gene050741:CDS 40.0%
AGTCAAGCTAAACATTCCTC+CGG + chr7.2:4529112-4529131 None:intergenic 40.0%
ATCAAGCACATGATTCGTGA+TGG + chr7.2:4531042-4531061 None:intergenic 40.0%
ATTCAAGGCGTAATTGAAGC+TGG - chr7.2:4530396-4530415 MS.gene050741:intron 40.0%
ATTGAGGAGGTTATACAAGC+TGG - chr7.2:4528694-4528713 MS.gene050741:intron 40.0%
CAATTTCGAACATCACAGCT+GGG - chr7.2:4531203-4531222 MS.gene050741:intron 40.0%
CACTATTATGCATGCAAGTG+AGG - chr7.2:4529209-4529228 MS.gene050741:CDS 40.0%
CATGTGAGTAGATCACACAA+GGG + chr7.2:4531595-4531614 None:intergenic 40.0%
CCTTGTAGCTACATACAGAT+GGG + chr7.2:4528405-4528424 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - chr7.2:4530069-4530088 MS.gene050741:CDS 40.0%
CTAATTGTTAGCTCCATCCT+TGG - chr7.2:4530162-4530181 MS.gene050741:CDS 40.0%
CTCTTGTGTATAACAGGGTA+AGG - chr7.2:4530043-4530062 MS.gene050741:CDS 40.0%
CTTACCCTGTTATACACAAG+AGG + chr7.2:4530045-4530064 None:intergenic 40.0%
GAAACTGTGAAGGAGATAGT+GGG + chr7.2:4530903-4530922 None:intergenic 40.0%
GAATAAGCACAGAAGGAGAT+GGG + chr7.2:4530548-4530567 None:intergenic 40.0%
GACCAAAGGACCAATTATAC+TGG + chr7.2:4531348-4531367 None:intergenic 40.0%
GCAAGGAGCTTCACAAAAAT+TGG + chr7.2:4528942-4528961 None:intergenic 40.0%
GCAATCTCAAATGCTACATC+GGG - chr7.2:4531416-4531435 MS.gene050741:intron 40.0%
GCAGCTATGTTGTTCTTTAG+TGG - chr7.2:4529910-4529929 MS.gene050741:intron 40.0%
GCTTGTATAACCTCCTCAAT+CGG + chr7.2:4528694-4528713 None:intergenic 40.0%
GGCAATCTCAAATGCTACAT+CGG - chr7.2:4531415-4531434 MS.gene050741:intron 40.0%
TAAGAGAAGGAAGAACTCGA+TGG + chr7.2:4531129-4531148 None:intergenic 40.0%
TCATAAGGAGGAAAGAGACA+TGG + chr7.2:4530993-4531012 None:intergenic 40.0%
TCTCAATCAGGGTTCAACTT+TGG - chr7.2:4531868-4531887 MS.gene050741:CDS 40.0%
TGAAGATTCTCGAGACATAC+TGG - chr7.2:4531806-4531825 MS.gene050741:CDS 40.0%
TGCCAGTATAATTGGTCCTT+TGG - chr7.2:4531343-4531362 MS.gene050741:intron 40.0%
TGTGTTGTCATGTGACTGAA+AGG - chr7.2:4529994-4530013 MS.gene050741:intron 40.0%
TGTTCACGAACATCATCACT+AGG + chr7.2:4528969-4528988 None:intergenic 40.0%
TTGAGGCAACAACTCAGTTT+CGG - chr7.2:4528547-4528566 MS.gene050741:intron 40.0%
TTTCAGTCACATGACAACAC+AGG + chr7.2:4529995-4530014 None:intergenic 40.0%
! ACAGATTCAGGTTTGTGCAT+TGG - chr7.2:4531234-4531253 MS.gene050741:intron 40.0%
! ATGTTCCCTGGTGATTTTGT+TGG - chr7.2:4531485-4531504 MS.gene050741:intron 40.0%
! CAGATTCAGGTTTGTGCATT+GGG - chr7.2:4531235-4531254 MS.gene050741:intron 40.0%
! TAGTGATGATGTTCGTGAAC+AGG - chr7.2:4528968-4528987 MS.gene050741:intron 40.0%
!! AAGATATGAAAGTGCCCAAC+AGG + chr7.2:4530355-4530374 None:intergenic 40.0%
AAAAATGCCGGCATCACTGA+TGG - chr7.2:4531685-4531704 MS.gene050741:intron 45.0%
AAAATTGGTCGACAGGTACC+TGG - chr7.2:4531549-4531568 MS.gene050741:intron 45.0%
AACATTTCCCAATGCCCACA+CGG + chr7.2:4529396-4529415 None:intergenic 45.0%
AAGTCTTGACTGATGCCTGT+TGG - chr7.2:4530337-4530356 MS.gene050741:intron 45.0%
ACACTCTCAAACTTCTGCAG+GGG - chr7.2:4529530-4529549 MS.gene050741:intron 45.0%
ACAGGTACCTGGTAAGTCAA+GGG - chr7.2:4531560-4531579 MS.gene050741:intron 45.0%
ACAGTAGAAGCTCAACAAGC+CGG + chr7.2:4530431-4530450 None:intergenic 45.0%
ACATGGCTGCAAGATATGAG+AGG + chr7.2:4530950-4530969 None:intergenic 45.0%
ACCTGATCAAAAGCAGGTTG+TGG + chr7.2:4529560-4529579 None:intergenic 45.0%
ACTGTCACAATCCTAGGATC+AGG + chr7.2:4531619-4531638 None:intergenic 45.0%
AGAACAAGATCACGGCATCT+AGG + chr7.2:4529431-4529450 None:intergenic 45.0%
AGAGCAGGAATAAGCACAGA+AGG + chr7.2:4530555-4530574 None:intergenic 45.0%
AGATGCCGTGATCTTGTTCT+CGG - chr7.2:4529431-4529450 MS.gene050741:intron 45.0%
AGCTCTGCGAGCATGAAAAA+GGG + chr7.2:4530144-4530163 None:intergenic 45.0%
AGTCCAGATTCCTGTAACCA+AGG + chr7.2:4528508-4528527 None:intergenic 45.0%
AGTCTTGACTGATGCCTGTT+GGG - chr7.2:4530338-4530357 MS.gene050741:intron 45.0%
ATATCAAGAAGGAAGCTGCC+TGG - chr7.2:4531393-4531412 MS.gene050741:intron 45.0%
ATCTCAAATGCTACATCGGG+TGG - chr7.2:4531419-4531438 MS.gene050741:intron 45.0%
CAATCAGGGTTCAACTTTGG+TGG - chr7.2:4531871-4531890 MS.gene050741:CDS 45.0%
CAGGTGATGCTTCTCAATCA+GGG - chr7.2:4531857-4531876 MS.gene050741:CDS 45.0%
CATCATCACTAGGAGAAGCA+AGG + chr7.2:4528959-4528978 None:intergenic 45.0%
CATGACCGAGAACAAGATCA+CGG + chr7.2:4529439-4529458 None:intergenic 45.0%
CCCATCTGTATGTAGCTACA+AGG - chr7.2:4528402-4528421 MS.gene050741:CDS 45.0%
GACACTCTCAAACTTCTGCA+GGG - chr7.2:4529529-4529548 MS.gene050741:intron 45.0%
GAGATGATTGACGAAGCTGA+GGG - chr7.2:4531724-4531743 MS.gene050741:CDS 45.0%
GATGGTCCAACACTATTGCA+AGG + chr7.2:4529314-4529333 None:intergenic 45.0%
GATTCTCGAGACATACTGGT+TGG - chr7.2:4531810-4531829 MS.gene050741:CDS 45.0%
GCGTACAATACACCAAATGG+TGG - chr7.2:4530068-4530087 MS.gene050741:CDS 45.0%
GCTGCGTACAATACACCAAA+TGG - chr7.2:4530065-4530084 MS.gene050741:CDS 45.0%
GGAATAAGCACAGAAGGAGA+TGG + chr7.2:4530549-4530568 None:intergenic 45.0%
GGACGGTATAGAAACTGTGA+AGG + chr7.2:4530913-4530932 None:intergenic 45.0%
GTATAACCTCCTCAATCGGT+GGG + chr7.2:4528690-4528709 None:intergenic 45.0%
TAATGCACCCTTGACTTACC+AGG + chr7.2:4531570-4531589 None:intergenic 45.0%
TACTCACATGTCCTGATCCT+AGG - chr7.2:4531605-4531624 MS.gene050741:intron 45.0%
TATCAAGAAGGAAGCTGCCT+GGG - chr7.2:4531394-4531413 MS.gene050741:intron 45.0%
TCATTCAATTGCGCCAACAG+AGG + chr7.2:4529473-4529492 None:intergenic 45.0%
TCTCAGTGTTGTCATGACTC+TGG + chr7.2:4531771-4531790 None:intergenic 45.0%
TGAGATGATTGACGAAGCTG+AGG - chr7.2:4531723-4531742 MS.gene050741:intron 45.0%
TGCAGGTTTAACCTGTAAGC+AGG + chr7.2:4530277-4530296 None:intergenic 45.0%
TGGGAACAAGCAACAGATTC+AGG - chr7.2:4531222-4531241 MS.gene050741:intron 45.0%
TGGTAGCTTAAGAACTGAGC+CGG + chr7.2:4530847-4530866 None:intergenic 45.0%
TGGTTGAGATCCGGAAGAAT+CGG - chr7.2:4527784-4527803 MS.gene050741:CDS 45.0%
TGTATAACCTCCTCAATCGG+TGG + chr7.2:4528691-4528710 None:intergenic 45.0%
TTTCTTCCCTCCGATTCTTC+CGG + chr7.2:4527797-4527816 None:intergenic 45.0%
! AACTAGCAGAGCTGATTCAC+CGG - chr7.2:4530825-4530844 MS.gene050741:intron 45.0%
! ATACACAAGAGGCTGTTTCC+AGG + chr7.2:4530034-4530053 None:intergenic 45.0%
! GCTTGTTGAGCTTCTACTGT+GGG - chr7.2:4530431-4530450 MS.gene050741:intron 45.0%
! GTAGGGGTGTGCATAAAAAC+TGG + chr7.2:4528262-4528281 None:intergenic 45.0%
! GTTGTAGTTTGAGGCAGCAT+GGG - chr7.2:4528851-4528870 MS.gene050741:intron 45.0%
! TAGCTCTGCGAGCATGAAAA+AGG + chr7.2:4530145-4530164 None:intergenic 45.0%
! TGTAGCATTTGAGATTGCCC+AGG + chr7.2:4531414-4531433 None:intergenic 45.0%
! TGTTGTAGTTTGAGGCAGCA+TGG - chr7.2:4528850-4528869 MS.gene050741:intron 45.0%
!! GAAGTTTGAGAGTGTCCATG+TGG + chr7.2:4529525-4529544 None:intergenic 45.0%
!! GTGAAGGAGATAGTGGGAAA+TGG + chr7.2:4530897-4530916 None:intergenic 45.0%
!! GTGTTAATGGGGTGCTTTTC+TGG - chr7.2:4531088-4531107 MS.gene050741:CDS 45.0%
AAGGTCACGTGTTCAAGTCC+TGG - chr7.2:4530013-4530032 MS.gene050741:intron 50.0%
AGCATGAAAAAGGGGCAACC+CGG + chr7.2:4530135-4530154 None:intergenic 50.0%
ATTCACGCCATCAGTGATGC+CGG + chr7.2:4531695-4531714 None:intergenic 50.0%
ATTCCTGCTCTACGCACAGT+TGG - chr7.2:4530564-4530583 MS.gene050741:intron 50.0%
CAGATTCCTGTAACCAAGGC+TGG + chr7.2:4528504-4528523 None:intergenic 50.0%
CAGCCTTGGTTACAGGAATC+TGG - chr7.2:4528502-4528521 MS.gene050741:intron 50.0%
CAGTGTTGTCATGACTCTGG+AGG + chr7.2:4531768-4531787 None:intergenic 50.0%
CCAGGTGATGCTTCTCAATC+AGG - chr7.2:4531856-4531875 MS.gene050741:CDS 50.0%
CGTGATCTTGTTCTCGGTCA+TGG - chr7.2:4529437-4529456 MS.gene050741:intron 50.0%
CTATGCTCAGAAACGCCACA+TGG - chr7.2:4529507-4529526 MS.gene050741:intron 50.0%
GACAGGTACCTGGTAAGTCA+AGG - chr7.2:4531559-4531578 MS.gene050741:intron 50.0%
GAGACGGAGAGAGGATAACT+TGG - chr7.2:4527764-4527783 MS.gene050741:CDS 50.0%
GATTGACGAAGCTGAGGGTT+TGG - chr7.2:4531729-4531748 MS.gene050741:CDS 50.0%
GCATCAAGAAGGAAGCTTGC+TGG - chr7.2:4531179-4531198 MS.gene050741:intron 50.0%
GCATGGAGGAAATCGTCTGT+AGG - chr7.2:4530746-4530765 MS.gene050741:intron 50.0%
GCTCTGCGAGCATGAAAAAG+GGG + chr7.2:4530143-4530162 None:intergenic 50.0%
GGACACTCTCAAACTTCTGC+AGG - chr7.2:4529528-4529547 MS.gene050741:intron 50.0%
GGTTCGTCGGAATCGATACA+AGG - chr7.2:4527716-4527735 MS.gene050741:CDS 50.0%
GGTTTAACCTGTAAGCAGGC+AGG + chr7.2:4530273-4530292 None:intergenic 50.0%
GTTGAATCCACCAGAAGGCA+CGG + chr7.2:4531911-4531930 None:intergenic 50.0%
TAACCTGTAAGCAGGCAGGA+TGG + chr7.2:4530269-4530288 None:intergenic 50.0%
TAAGCACAGAAGGAGATGGG+TGG + chr7.2:4530545-4530564 None:intergenic 50.0%
TCGGAATCGATACAAGGTGG+CGG - chr7.2:4527722-4527741 MS.gene050741:CDS 50.0%
TCGTCGGAATCGATACAAGG+TGG - chr7.2:4527719-4527738 MS.gene050741:CDS 50.0%
TGAGATCCGGAAGAATCGGA+GGG - chr7.2:4527788-4527807 MS.gene050741:CDS 50.0%
TGGAGCTTTGCTTCCTCTGT+TGG - chr7.2:4529457-4529476 MS.gene050741:intron 50.0%
TTCCTGTAACCAAGGCTGGT+AGG + chr7.2:4528500-4528519 None:intergenic 50.0%
TTGAAGCTGGTGTCTGTAGC+CGG - chr7.2:4530409-4530428 MS.gene050741:intron 50.0%
TTGAGATCCGGAAGAATCGG+AGG - chr7.2:4527787-4527806 MS.gene050741:CDS 50.0%
TTTCCAACTGTGCGTAGAGC+AGG + chr7.2:4530570-4530589 None:intergenic 50.0%
! ATACAAGGTGGCGGTTGATG+CGG - chr7.2:4527731-4527750 MS.gene050741:CDS 50.0%
! GCATCACTGATGGCGTGAAT+CGG - chr7.2:4531695-4531714 MS.gene050741:intron 50.0%
! GGAAGATTTTCCACAGCTGC+AGG - chr7.2:4528750-4528769 MS.gene050741:intron 50.0%
! TCTCGAGACATACTGGTTGG+AGG - chr7.2:4531813-4531832 MS.gene050741:CDS 50.0%
! TGGAGATGACTTGCAGACAC+AGG - chr7.2:4530599-4530618 MS.gene050741:intron 50.0%
! TTGCAGAAGAAGAGGCGTGA+AGG - chr7.2:4527819-4527838 MS.gene050741:CDS 50.0%
!! CCTGATTGAGAAGCATCACC+TGG + chr7.2:4531859-4531878 None:intergenic 50.0%
!! CTCGATGGTTGATGATGACC+TGG + chr7.2:4531114-4531133 None:intergenic 50.0%
!! GATTGAGAAGCATCACCTGG+AGG + chr7.2:4531856-4531875 None:intergenic 50.0%
!! GCCACAACCTGCTTTTGATC+AGG - chr7.2:4529556-4529575 MS.gene050741:intron 50.0%
!! GGCTTGTTGAGCTTCTACTG+TGG - chr7.2:4530430-4530449 MS.gene050741:intron 50.0%
!! GTATCGATTCCGACGAACCT+CGG + chr7.2:4527715-4527734 None:intergenic 50.0%
!! TGGGCATTGGGAAATGTTGC+TGG - chr7.2:4529398-4529417 MS.gene050741:intron 50.0%
ACTGATGCAGGCATCTGCTG+AGG + chr7.2:4527852-4527871 None:intergenic 55.0%
ACTTGAGCTCCCGCATATGC+AGG + chr7.2:4530109-4530128 None:intergenic 55.0%
ATGCGGAAGAAGGTCGGAGA+CGG - chr7.2:4527748-4527767 MS.gene050741:CDS 55.0%
CACCTACCAGCCTTGGTTAC+AGG - chr7.2:4528495-4528514 MS.gene050741:intron 55.0%
CCTGACAGTCCACACAACAC+AGG + chr7.2:4529373-4529392 None:intergenic 55.0%
CTACCATCCTGCCTGCTTAC+AGG - chr7.2:4530263-4530282 MS.gene050741:intron 55.0%
CTGGTTGGAGGAAGATGACG+AGG - chr7.2:4531825-4531844 MS.gene050741:CDS 55.0%
CTTGAGCTCCCGCATATGCA+GGG + chr7.2:4530108-4530127 None:intergenic 55.0%
GTTGGAACACCTACCAGCCT+TGG - chr7.2:4528488-4528507 MS.gene050741:intron 55.0%
TAACGCAAACGCGAGAACCG+AGG - chr7.2:4527695-4527714 MS.gene050741:CDS 55.0%
TCGGTTCTCGCGTTTGCGTT+AGG + chr7.2:4527696-4527715 None:intergenic 55.0%
TGGATGAGACTGGCAAGTGC+AGG + chr7.2:4530303-4530322 None:intergenic 55.0%
! AGAACGTAGCCCACCGATTG+AGG - chr7.2:4528678-4528697 MS.gene050741:intron 55.0%
! AGAAGGCACGGCAGGAACAT+CGG + chr7.2:4531899-4531918 None:intergenic 55.0%
! CCTGTGTTGTGTGGACTGTC+AGG - chr7.2:4529370-4529389 MS.gene050741:intron 55.0%
! CGGTTGATGCGGAAGAAGGT+CGG - chr7.2:4527742-4527761 MS.gene050741:CDS 55.0%
!! AATGGGGTGCTTTTCTGGCC+AGG - chr7.2:4531093-4531112 MS.gene050741:CDS 55.0%
!! TCAATCGGTGGGCTACGTTC+TGG + chr7.2:4528679-4528698 None:intergenic 55.0%
ACGCGAGAACCGAGGTTCGT+CGG - chr7.2:4527703-4527722 MS.gene050741:CDS 60.0%
AGAAGGTCGGAGACGGAGAG+AGG - chr7.2:4527755-4527774 MS.gene050741:CDS 60.0%
ATGCGGGAGCTCAAGTGCAC+CGG - chr7.2:4530113-4530132 MS.gene050741:CDS 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr7.2:4530096-4530115 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr7.2:4530096-4530115 MS.gene050741:CDS 60.0%
GATGACGAGGCTATGCCTCC+AGG - chr7.2:4531838-4531857 MS.gene050741:CDS 60.0%
GATGTTCCTGCCGTGCCTTC+TGG - chr7.2:4531898-4531917 MS.gene050741:CDS 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr7.2:4530097-4530116 None:intergenic 60.0%
TGTCAGGCCGTGTGGGCATT+GGG - chr7.2:4529386-4529405 MS.gene050741:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr7.2:4530097-4530116 MS.gene050741:CDS 60.0%
! AATCCACCAGAAGGCACGGC+AGG + chr7.2:4531907-4531926 None:intergenic 60.0%
! ACGTAGCCCACCGATTGAGG+AGG - chr7.2:4528681-4528700 MS.gene050741:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr7.2:4530081-4530100 MS.gene050741:CDS 60.0%
! CTGGCAAGTGCAGGAAGTGC+AGG + chr7.2:4530294-4530313 None:intergenic 60.0%
! GTGGCGGTTGATGCGGAAGA+AGG - chr7.2:4527738-4527757 MS.gene050741:CDS 60.0%
! TGTGGACTGTCAGGCCGTGT+GGG - chr7.2:4529379-4529398 MS.gene050741:intron 60.0%
CGCATATGCAGGGTCCGGGA+AGG + chr7.2:4530098-4530117 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr7.2:4530083-4530102 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr7.2:4530102-4530121 None:intergenic 65.0%
CTGTCAGGCCGTGTGGGCAT+TGG - chr7.2:4529385-4529404 MS.gene050741:intron 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr7.2:4530103-4530122 None:intergenic 65.0%
GTTCCTGCCGTGCCTTCTGG+TGG - chr7.2:4531901-4531920 MS.gene050741:CDS 65.0%
TGCGGGAGCTCAAGTGCACC+GGG - chr7.2:4530114-4530133 MS.gene050741:CDS 65.0%
! GTGTGGACTGTCAGGCCGTG+TGG - chr7.2:4529378-4529397 MS.gene050741:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 4527681 4531939 4527681 ID=MS.gene050741
chr7.2 mRNA 4527681 4531939 4527681 ID=MS.gene050741.t1;Parent=MS.gene050741
chr7.2 exon 4531724 4531939 4531724 ID=MS.gene050741.t1.exon1;Parent=MS.gene050741.t1
chr7.2 CDS 4531724 4531939 4531724 ID=cds.MS.gene050741.t1;Parent=MS.gene050741.t1
chr7.2 exon 4531035 4531131 4531035 ID=MS.gene050741.t1.exon2;Parent=MS.gene050741.t1
chr7.2 CDS 4531035 4531131 4531035 ID=cds.MS.gene050741.t1;Parent=MS.gene050741.t1
chr7.2 exon 4530849 4530940 4530849 ID=MS.gene050741.t1.exon3;Parent=MS.gene050741.t1
chr7.2 CDS 4530849 4530940 4530849 ID=cds.MS.gene050741.t1;Parent=MS.gene050741.t1
chr7.2 exon 4530631 4530762 4530631 ID=MS.gene050741.t1.exon4;Parent=MS.gene050741.t1
chr7.2 CDS 4530631 4530762 4530631 ID=cds.MS.gene050741.t1;Parent=MS.gene050741.t1
chr7.2 exon 4530043 4530228 4530043 ID=MS.gene050741.t1.exon5;Parent=MS.gene050741.t1
chr7.2 CDS 4530043 4530228 4530043 ID=cds.MS.gene050741.t1;Parent=MS.gene050741.t1
chr7.2 exon 4529172 4529335 4529172 ID=MS.gene050741.t1.exon6;Parent=MS.gene050741.t1
chr7.2 CDS 4529172 4529335 4529172 ID=cds.MS.gene050741.t1;Parent=MS.gene050741.t1
chr7.2 exon 4529000 4529078 4529000 ID=MS.gene050741.t1.exon7;Parent=MS.gene050741.t1
chr7.2 CDS 4529000 4529078 4529000 ID=cds.MS.gene050741.t1;Parent=MS.gene050741.t1
chr7.2 exon 4528377 4528505 4528377 ID=MS.gene050741.t1.exon8;Parent=MS.gene050741.t1
chr7.2 CDS 4528377 4528505 4528377 ID=cds.MS.gene050741.t1;Parent=MS.gene050741.t1
chr7.2 exon 4528161 4528288 4528161 ID=MS.gene050741.t1.exon9;Parent=MS.gene050741.t1
chr7.2 CDS 4528161 4528288 4528161 ID=cds.MS.gene050741.t1;Parent=MS.gene050741.t1
chr7.2 exon 4527681 4528056 4527681 ID=MS.gene050741.t1.exon10;Parent=MS.gene050741.t1
chr7.2 CDS 4527681 4528056 4527681 ID=cds.MS.gene050741.t1;Parent=MS.gene050741.t1
Gene Sequence

>MS.gene050741

ATGTCGTATCGTCCTAACGCAAACGCGAGAACCGAGGTTCGTCGGAATCGATACAAGGTGGCGGTTGATGCGGAAGAAGGTCGGAGACGGAGAGAGGATAACTTGGTTGAGATCCGGAAGAATCGGAGGGAAGAAAGCTTGCAGAAGAAGAGGCGTGAAGGACTTCAACCTCAGCAGATGCCTGCATCAGTTCAATCTAATCTACTCGAGAAAAAGGTTAAGATTCTCTTGATCTCACTACTTTACTTGTTCTTTCCGATTTTCTACTTTACTACGTTGGATAAGTTATTAGGTTAATTGAGAAATTGATAATACTGGATTAGGTTAATTGCAATATATTGATAGTAGCGATTAGGTTAATTGAGAAATTGATACTGCTGGATTAGGTTAATTGCAATATTGATAGTCGTGATTAGTTTAATTGCAAAATTGATGATAGTAATTAGGTTAATTTTCCTGTTTATGTTGTTTTGATTCATTTGAATATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATAACTTATTGTTCTTGTGATCCAGTTTTTATGCACACCCCTACTTGTTATGCTTCATTTGAGATTTAGCAGTGTTTGTTAATTTTAAGGGTTATAATATGATTATTATTATGATTCAAACATGTTCATGATATTCACTGGTTATATGCTGTGACTGTGTCTTTCCCATCTGTATGTAGCTACAAGGTTTGATTAATATTATGGTAGGTTATGAACTTGAAGTTTACTGAATTGTTGTTATCATTCTGCAGTTGGAACACCTACCAGCCTTGGTTACAGGAATCTGGACTGATGATAATAACATGCAGTTTGAGGCAACAACTCAGTTTCGGAAGTTGCTTTCAATTGGTTAGATATTGTTCTACGTAACTTTATTTTCATTCATTTTTTTGTATACAATTTTTTAAGGGACATTTGGTTAACAACTTTTATGTCTTACCAGAACGTAGCCCACCGATTGAGGAGGTTATACAAGCTGGTGTAGTTCCTCGTTTTATTGAGTTCTTGATGAGGGAAGATTTTCCACAGCTGCAGGTTATTATCTTCCTTGTTTTATTTTATGCAATAGATATTTATATTTATTTGTACATTGCACTGATTTTGTTTACTGTATGTTGTAGTTTGAGGCAGCATGGGCTTTGACAAATATAGCTTCTGGAACATCTGAAAACACTAAGGTAGTAATTGAGGCAGGTGCTGTACCAATTTTTGTGAAGCTCCTTGCTTCTCCTAGTGATGATGTTCGTGAACAGGTATGTTTACTTTATATACCTTATGCAATTTGTGCCTTGGTTTTTGCCTATCAGTAAAATTTATATGGTTTCTTACTTTTTATTGGGAGACACCCTTCTTTTTTTGTTAATGAAGTTAACCGGAGGAATGTTTAGCTTGACTAGACAACTTACTTGTTCACTTTGATTTTAGATTTGGTTTGTATGCTGTTTCTAGATTCTAGGTGTGATGTTTGCATGCACTATTATGCATGCAAGTGAGGTTGAGTTAAATGCATTTGCTTTGAGTTTATTTTTTTCTTTAACTTGTTGCTGAAGCTATGCACAAAAATGACGACATTGCCTTGCAATAGTGTTGGACCATCTAGTGTGATCTATCTCATCTGAAGTTTAACATCTTTCCTGTGTTGTGTGGACTGTCAGGCCGTGTGGGCATTGGGAAATGTTGCTGGAGATTCACCTAGATGCCGTGATCTTGTTCTCGGTCATGGAGCTTTGCTTCCTCTGTTGGCGCAATTGAATGAGCATGCCAAACTTTCTATGCTCAGAAACGCCACATGGACACTCTCAAACTTCTGCAGGGGAAAGCCACAACCTGCTTTTGATCAGGTATAAAGTTATGCATAATATTTCTAAAATAAGATTCATTACTTACACACAGATGAGTAATTACAAGGCTCTATATACACAAGTATAAAGTCCATTTGGTACACAAATGGGCTTATATATGCACGATACCTAGAACTTGAACTAGAAATTTTGGCACCTTTAATATTTGTTTATATCTGCTATTGTGAAATGAAATTTTTTTACTTGCTCCATTTGTTTGAATTTTCTTATTGCTATGTCTGCTTTCCTCAACACCTTGTATGTTGAAAAATTATCAAATTGCTTAATCTATGCTATAGTTTATATTGAAAAATTATGGTATTGCAGTGTGTGCAGCTATGTTGTTCTTTAGTGGCATCTTGTAAATAAAGGTGGTCAAATTTGTGGTTTGTATGTGAAGGCCATATTATTTAACCTGTGTTGTCATGTGACTGAAAGGTCACGTGTTCAAGTCCTGGAAACAGCCTCTTGTGTATAACAGGGTAAGGCTGCGTACAATACACCAAATGGTGGGACCCCTTCCCGGACCCTGCATATGCGGGAGCTCAAGTGCACCGGGTTGCCCCTTTTTCATGCTCGCAGAGCTAATTGTTAGCTCCATCCTTGGTTTTACCAGTCTTTTTGTTTTGCTGACTCTACTATTTTAATGAGTAATAATTGATTCTTAATATCGGAGTTTATAACTCTACCATCCTGCCTGCTTACAGGTTAAACCTGCACTTCCTGCACTTGCCAGTCTCATCCATTCAAATGATGAAGAAGTCTTGACTGATGCCTGTTGGGCACTTTCATATCTTTCTGATGGTGCAAATGACAAAATTCAAGGCGTAATTGAAGCTGGTGTCTGTAGCCGGCTTGTTGAGCTTCTACTGTGGGTATTCTGAATATCAAATTTAGCTGTTCAAAGTTGTTTCGCTTAGTTATTATGATGTGAAATTCTAATTATTATTTTGGTTTTGTTCAGCCACCCATCTCCTTCTGTGCTTATTCCTGCTCTACGCACAGTTGGAAATATTGTCACTGGAGATGACTTGCAGACACAGGTATTAAGTTCAAGAGTTTATTCTTTCATCTCTTATATACAGTAGTTAATTCTGCGATTTTGCACTAAGAGAAATAGTAATACACACTGGAGCTAGTGATTTAAGTTCTGAAATTAAAATTAAACGCATGGAGGAAATCGTCTGTAGGAAAAAACTGTTACACAAGTATATGAAATTCAGAAAATGCAGAAGTAGCAAGAGATAAACTAGCAGAGCTGATTCACCGGCTCAGTTCTTAAGCTACCAATTTCCTCATTATAATTCGCTTTGTCACCATTTCCCACTATCTCCTTCACAGTTTCTATACCGTCCAATTGCACAAATTTCCTCTCATATCTTGCAGCCATGTGTATATTCTGTTGCACTCTTCCATGTCTCTTTCCTCCTTATGATTAGCAGCAATAGAATTGATATAATGCCATCACGAATCATGTGCTTGATTATTATTTTACTTTTGATTTTGGTTTGTGTTAATGGGGTGCTTTTCTGGCCAGGTCATCATCAACCATCGAGTTCTTCCTTCTCTTAAGAACCTCTTGATTAATAGTTATAAAAAAAGCATCAAGAAGGAAGCTTGCTGGACAATTTCGAACATCACAGCTGGGAACAAGCAACAGATTCAGGTTTGTGCATTGGGATAATTAAAATCTGTGTTATCTTTGCATTTGGAGTACTTAATTTATATTTCTCTTGATTCTTGAAAATTTACAGGATGTGATTGATGCCAGTATAATTGGTCCTTTGGTCAACTTGCTTCAAAATGCTGAGTTTGATATCAAGAAGGAAGCTGCCTGGGCAATCTCAAATGCTACATCGGGTGGATCTCATGAACAACTCAAGTATGGAGAGATCCTTAAATTTACAATGTTCCCTGGTGATTTTGTTGGTTTTATAGCATTTTTTTTTTCCGAGATGTCATAATCTTTTTAAAATTGGTCGACAGGTACCTGGTAAGTCAAGGGTGCATTAAGCCCTTGTGTGATCTACTCACATGTCCTGATCCTAGGATTGTGACAGTTTGTCTTGAAGGGCTTGAAAACATCTTAAAGGTAGGGGAAGCTGATAAAAATGCCGGCATCACTGATGGCGTGAATCGGTATGCTGAGATGATTGACGAAGCTGAGGGTTTGGAGAAAATTGAGAACCTCCAGAGTCATGACAACACTGAGATTTATGAAAAGGCTGTGAAGATTCTCGAGACATACTGGTTGGAGGAAGATGACGAGGCTATGCCTCCAGGTGATGCTTCTCAATCAGGGTTCAACTTTGGTGGCTCCGATGTTCCTGCCGTGCCTTCTGGTGGATTCAACTTTAACTAG
Protein sequence

>MS.gene050741.t1

MSYRPNANARTEVRRNRYKVAVDAEEGRRRREDNLVEIRKNRREESLQKKRREGLQPQQMPASVQSNLLEKKLEHLPALVTGIWTDDNNMQFEATTQFRKLLSIERSPPIEEVIQAGVVPRFIEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIEAGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPAFDQVKPALPALASLIHSNDEEVLTDACWALSYLSDGANDKIQGVIEAGVCSRLVELLLHPSPSVLIPALRTVGNIVTGDDLQTQVIINHRVLPSLKNLLINSYKKSIKKEACWTISNITAGNKQQIQDVIDASIIGPLVNLLQNAEFDIKKEAAWAISNATSGGSHEQLKYLVSQGCIKPLCDLLTCPDPRIVTVCLEGLENILKVGEADKNAGITDGVNRYAEMIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEDDEAMPPGDASQSGFNFGGSDVPAVPSGGFNFN