Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050839.t1 | RHN49095.1 | 99.1 | 861 | 8 | 0 | 1 | 861 | 1 | 861 | 0.00E+00 | 1651 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050839.t1 | O74873 | 24.5 | 709 | 414 | 25 | 181 | 808 | 52 | 720 | 4.7e-35 | 151.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050839.t1 | A0A396HCU0 | 99.1 | 861 | 8 | 0 | 1 | 861 | 1 | 861 | 0.0e+00 | 1651.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050786 | MS.gene050839 | 0.81823 | 2.18E-52 | -1.69E-46 |
| MS.gene050839 | MS.gene064489 | 0.80671 | 7.21E-50 | -1.69E-46 |
| MS.gene050839 | MS.gene072583 | 0.812547 | 4.01E-51 | -1.69E-46 |
| MS.gene050839 | MS.gene072642 | 0.982089 | 3.33E-154 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050839.t1 | MTR_7g110640 | 97.793 | 861 | 9 | 1 | 1 | 861 | 1 | 851 | 0.0 | 1714 |
| MS.gene050839.t1 | MTR_3g084740 | 23.088 | 706 | 437 | 21 | 182 | 808 | 56 | 734 | 9.97e-32 | 133 |
| MS.gene050839.t1 | MTR_8g011270 | 21.555 | 733 | 472 | 21 | 162 | 821 | 36 | 738 | 1.25e-30 | 129 |
| MS.gene050839.t1 | MTR_3g084740 | 22.791 | 645 | 402 | 20 | 182 | 757 | 56 | 673 | 4.87e-26 | 115 |
| MS.gene050839.t1 | MTR_1g105605 | 21.637 | 684 | 449 | 18 | 185 | 808 | 55 | 711 | 1.11e-18 | 91.7 |
| MS.gene050839.t1 | MTR_7g111710 | 22.049 | 576 | 362 | 22 | 134 | 670 | 297 | 824 | 1.18e-11 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050839.t1 | AT4G01810 | 76.217 | 883 | 165 | 10 | 4 | 860 | 16 | 879 | 0.0 | 1347 |
| MS.gene050839.t1 | AT4G01810 | 76.217 | 883 | 165 | 10 | 4 | 860 | 16 | 879 | 0.0 | 1347 |
| MS.gene050839.t1 | AT4G01810 | 76.217 | 883 | 165 | 10 | 4 | 860 | 16 | 879 | 0.0 | 1347 |
| MS.gene050839.t1 | AT2G21630 | 21.909 | 744 | 483 | 20 | 147 | 818 | 22 | 739 | 6.22e-28 | 121 |
| MS.gene050839.t1 | AT3G23660 | 22.897 | 725 | 470 | 21 | 151 | 808 | 26 | 728 | 1.17e-27 | 120 |
| MS.gene050839.t1 | AT4G14160 | 22.461 | 699 | 445 | 21 | 182 | 808 | 62 | 735 | 1.50e-27 | 120 |
| MS.gene050839.t1 | AT4G14160 | 22.857 | 700 | 442 | 22 | 182 | 808 | 62 | 736 | 3.05e-27 | 119 |
| MS.gene050839.t1 | AT3G23660 | 22.667 | 750 | 467 | 23 | 151 | 808 | 26 | 754 | 1.25e-25 | 114 |
| MS.gene050839.t1 | AT5G43670 | 22.452 | 726 | 453 | 21 | 178 | 808 | 49 | 759 | 2.56e-22 | 103 |
| MS.gene050839.t1 | AT4G14160 | 22.662 | 556 | 351 | 17 | 182 | 679 | 62 | 596 | 3.77e-20 | 96.3 |
| MS.gene050839.t1 | AT3G07100 | 20.914 | 722 | 464 | 26 | 101 | 764 | 278 | 950 | 1.09e-11 | 69.3 |
Find 247 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTGAAGGCTTTGCTTTA+TGG | 0.139676 | 7.1:-4398051 | MS.gene050839:CDS |
| AAGGATATTGGTCTAAAATT+TGG | 0.164264 | 7.1:-4397109 | MS.gene050839:CDS |
| GACTTACAGTCACAAGTTTC+TGG | 0.167719 | 7.1:-4399033 | MS.gene050839:CDS |
| CCACTATTGGGATGCATTAT+TGG | 0.182224 | 7.1:-4397001 | MS.gene050839:CDS |
| GCATCTGCTGATGTGCTTCC+TGG | 0.200862 | 7.1:-4398096 | MS.gene050839:CDS |
| CAAAAGATGCATTTAGAAAT+AGG | 0.208765 | 7.1:+4396948 | None:intergenic |
| GGTTGCTCTTGCTATAATTC+AGG | 0.239657 | 7.1:-4397899 | MS.gene050839:CDS |
| TTTAAGATAGGAACTCTTAC+AGG | 0.250263 | 7.1:+4397646 | None:intergenic |
| GCCGGTGGACCGAACACTTA+TGG | 0.263379 | 7.1:-4397808 | MS.gene050839:CDS |
| TTGAAATGGATGGAGAATTT+AGG | 0.277803 | 7.1:-4397724 | MS.gene050839:CDS |
| ATGGTTGACTTTGTTCAAAC+TGG | 0.284715 | 7.1:-4398330 | MS.gene050839:CDS |
| TCTTTCTGTAATTGTAATAT+TGG | 0.289656 | 7.1:+4399249 | None:intergenic |
| CGGCGTCAATGATGAAAATA+TGG | 0.290989 | 7.1:+4397978 | None:intergenic |
| CCTACAGTAGATAGTGTTTC+GGG | 0.298307 | 7.1:-4397250 | MS.gene050839:CDS |
| AACTACTGGTGCAGACATTC+TGG | 0.301882 | 7.1:+4398272 | None:intergenic |
| CCACCCTAATTATCCGTATA+TGG | 0.302828 | 7.1:-4397758 | MS.gene050839:CDS |
| CAATGCCCCAAAACCCAAAC+TGG | 0.316290 | 7.1:+4398572 | None:intergenic |
| TTGGTTCTTCATGATGATTT+TGG | 0.319030 | 7.1:-4397595 | MS.gene050839:CDS |
| ACAAGCAAATGTACCCAGTT+TGG | 0.324194 | 7.1:-4398586 | MS.gene050839:CDS |
| TTTCCATATACGGATAATTA+GGG | 0.335818 | 7.1:+4397755 | None:intergenic |
| CATCTGCTGATGTGCTTCCT+GGG | 0.336370 | 7.1:-4398095 | MS.gene050839:CDS |
| TCTGGTACGTTCAACTTATA+CGG | 0.339293 | 7.1:+4397958 | None:intergenic |
| AAAAGCATCAGGTGGAGTTT+TGG | 0.348973 | 7.1:-4397614 | MS.gene050839:CDS |
| ACAGAGCTTCGCTCTCTCTA+TGG | 0.349880 | 7.1:-4397377 | MS.gene050839:CDS |
| GGGGATCGCGCTGTATTACC+TGG | 0.351569 | 7.1:+4398517 | None:intergenic |
| AATGTACCCAGTTTGGGTTT+TGG | 0.352094 | 7.1:-4398579 | MS.gene050839:CDS |
| GCCTACAGTAGATAGTGTTT+CGG | 0.357522 | 7.1:-4397251 | MS.gene050839:CDS |
| AAAGGAGCTTTCTCTCTTAC+CGG | 0.359772 | 7.1:-4397050 | MS.gene050839:CDS |
| CAAGCAAATGTACCCAGTTT+GGG | 0.360268 | 7.1:-4398585 | MS.gene050839:CDS |
| TCTCAGGAGAGGGCCACTAT+TGG | 0.360541 | 7.1:-4397014 | MS.gene050839:CDS |
| CTAGTTGAAGGAGGAGGAGG+AGG | 0.361462 | 7.1:+4399303 | None:intergenic |
| GGGATATCTTGAAAGTGTTC+AGG | 0.362371 | 7.1:-4397230 | MS.gene050839:CDS |
| ACAAGTTTCTGGTGGCTTAG+AGG | 0.363880 | 7.1:-4399022 | MS.gene050839:CDS |
| TCCATGGGAGCCTGCTGATC+TGG | 0.372023 | 7.1:+4397537 | None:intergenic |
| CACCGATCTCTGGAAGCTTC+TGG | 0.373407 | 7.1:+4397940 | None:intergenic |
| AACAGCCACTGAATGGTTCT+TGG | 0.376140 | 7.1:+4397162 | None:intergenic |
| CGCATCCATTCACAGAAACT+TGG | 0.382554 | 7.1:+4395001 | None:intergenic |
| GATGGGATGAACCCAACATT+AGG | 0.384059 | 7.1:+4399366 | None:intergenic |
| ATAATTCCTAATCTTGTTGT+TGG | 0.386425 | 7.1:+4398168 | None:intergenic |
| GTCACCAATGCATGCTTCAC+TGG | 0.387009 | 7.1:-4398013 | MS.gene050839:CDS |
| TTGAATACTGAATTGCAAAC+TGG | 0.388045 | 7.1:+4397317 | None:intergenic |
| ATCACTCAAGTTGTGGGTCC+AGG | 0.390955 | 7.1:-4397481 | MS.gene050839:CDS |
| AGTTCCTAGGCACCGATCTC+TGG | 0.396441 | 7.1:+4397930 | None:intergenic |
| GGTAAGAGAGAAAGCTCCTT+TGG | 0.396517 | 7.1:+4397052 | None:intergenic |
| GACATTCTGGAATCTGAAAC+TGG | 0.397143 | 7.1:+4398285 | None:intergenic |
| AGATTAGGAATTATACTATA+TGG | 0.397844 | 7.1:-4398159 | MS.gene050839:CDS |
| TCCTCGTATCCTTGCATTCA+AGG | 0.399565 | 7.1:-4395347 | MS.gene050839:intron |
| GATGAAAGAATCAAGGATAT+TGG | 0.400096 | 7.1:-4397121 | MS.gene050839:CDS |
| CCGGTGGACCGAACACTTAT+GGG | 0.402191 | 7.1:-4397807 | MS.gene050839:CDS |
| TTTGCAAGAGGATTTAAGAT+AGG | 0.402810 | 7.1:+4397634 | None:intergenic |
| ACCATTGGTGAAGATAGTTC+TGG | 0.403758 | 7.1:+4398348 | None:intergenic |
| GGGCATTGGTCTCTCCTGGT+AGG | 0.404383 | 7.1:-4398557 | MS.gene050839:CDS |
| CCTGGTAGGGAGGTCTCAAC+TGG | 0.405575 | 7.1:-4398543 | MS.gene050839:CDS |
| CTCAGGAGAGGGCCACTATT+GGG | 0.412507 | 7.1:-4397013 | MS.gene050839:CDS |
| ATGGAACTGATGTCTTCATT+TGG | 0.415608 | 7.1:-4396808 | MS.gene050839:CDS |
| TTTGGGGCATTGGTCTCTCC+TGG | 0.416619 | 7.1:-4398561 | MS.gene050839:CDS |
| ACAAAGGATGACTCTCCATT+TGG | 0.416965 | 7.1:+4398991 | None:intergenic |
| CGAGGGGTTGTCAAAAGGTC+AGG | 0.419375 | 7.1:-4397856 | MS.gene050839:CDS |
| GCACGGACCTCTCATCTTCA+TGG | 0.423564 | 7.1:+4396978 | None:intergenic |
| CTCCCTCCAACAACAAGATT+AGG | 0.425059 | 7.1:-4398174 | MS.gene050839:CDS |
| GTGTTGTTTACCTGCTCATA+AGG | 0.426814 | 7.1:+4395177 | None:intergenic |
| AAGGCTTTGCTTTATGGTAC+AGG | 0.428062 | 7.1:-4398045 | MS.gene050839:CDS |
| TGGAAAAGACAGCATTGAAA+TGG | 0.428902 | 7.1:-4397738 | MS.gene050839:CDS |
| TTCTGTAATTGTAATATTGG+TGG | 0.430203 | 7.1:+4399252 | None:intergenic |
| ACGATCCAAGTTTCTGTGAA+TGG | 0.430684 | 7.1:-4395006 | MS.gene050839:CDS |
| GGCTCATCGACACAATATAT+TGG | 0.432834 | 7.1:-4397695 | MS.gene050839:CDS |
| TGCAACATATTGCTTGGATC+AGG | 0.433218 | 7.1:-4398456 | MS.gene050839:CDS |
| AGTTGAAGGAGGAGGAGGAG+GGG | 0.435958 | 7.1:+4399305 | None:intergenic |
| GGGGTACTCAAGTGAGGAAC+TGG | 0.436654 | 7.1:+4399201 | None:intergenic |
| GAGGAACGAGCCGGCGGCTG+AGG | 0.441389 | 7.1:+4399108 | None:intergenic |
| TAGTTGAAGGAGGAGGAGGA+GGG | 0.442572 | 7.1:+4399304 | None:intergenic |
| GGAATGGCAGCTGGACGGAC+AGG | 0.443534 | 7.1:+4399153 | None:intergenic |
| CTCCTCGTTGTCTAATGCAC+AGG | 0.443595 | 7.1:-4396904 | MS.gene050839:CDS |
| AATATTGGTGGAGGAAATCT+AGG | 0.445589 | 7.1:+4399264 | None:intergenic |
| CCAATAATGCATCCCAATAG+TGG | 0.447762 | 7.1:+4397001 | None:intergenic |
| GTTGCTCTTGCTATAATTCA+GGG | 0.450113 | 7.1:-4397898 | MS.gene050839:CDS |
| TTGTCTAATGCACAGGGAGG+GGG | 0.451959 | 7.1:-4396897 | MS.gene050839:CDS |
| TCGCCACCACGTTACTCAAA+TGG | 0.453714 | 7.1:-4399063 | MS.gene050839:CDS |
| AGGGCGTCTGCCAGATCAGC+AGG | 0.454933 | 7.1:-4397547 | MS.gene050839:CDS |
| CCCATAAGTGTTCGGTCCAC+CGG | 0.456496 | 7.1:+4397807 | None:intergenic |
| ACCCAACATTAGGTTGTGTT+GGG | 0.461867 | 7.1:+4399376 | None:intergenic |
| GTAAGAGAGAAAGCTCCTTT+GGG | 0.462126 | 7.1:+4397053 | None:intergenic |
| ACCCAACACAACCTAATGTT+GGG | 0.462638 | 7.1:-4399377 | MS.gene050839:CDS |
| TCACTTGGTGACTTGTCCCC+AGG | 0.464133 | 7.1:+4398078 | None:intergenic |
| ATATATTGCAACATATTGCT+TGG | 0.465612 | 7.1:-4398462 | MS.gene050839:CDS |
| AATCCTCTTGCAAAAGCATC+AGG | 0.471518 | 7.1:-4397625 | MS.gene050839:CDS |
| GCCGGCGGCTGAGGCGAAGC+GGG | 0.473144 | 7.1:+4399117 | None:intergenic |
| ACCCGCTTCGCCTCAGCCGC+CGG | 0.474251 | 7.1:-4399118 | MS.gene050839:CDS |
| AACTGATGTCTTCATTTGGC+TGG | 0.475952 | 7.1:-4396804 | MS.gene050839:intron |
| GGCATTGGTCTCTCCTGGTA+GGG | 0.478728 | 7.1:-4398556 | MS.gene050839:CDS |
| GGACCGAACACTTATGGGCC+TGG | 0.482136 | 7.1:-4397802 | MS.gene050839:CDS |
| TGTAATTGTAATATTGGTGG+AGG | 0.482734 | 7.1:+4399255 | None:intergenic |
| TTTGGCTGCATGCAGGACAT+TGG | 0.483530 | 7.1:-4395401 | MS.gene050839:CDS |
| AACCCAACATTAGGTTGTGT+TGG | 0.484804 | 7.1:+4399375 | None:intergenic |
| ATACTAGTTGAAGGAGGAGG+AGG | 0.484811 | 7.1:+4399300 | None:intergenic |
| CCTCACTTGAGTACCCCTCC+TGG | 0.485475 | 7.1:-4399195 | MS.gene050839:CDS |
| AACCCAACACAACCTAATGT+TGG | 0.487252 | 7.1:-4399378 | MS.gene050839:CDS |
| GCCAGATCAGCAGGCTCCCA+TGG | 0.487693 | 7.1:-4397538 | MS.gene050839:CDS |
| CTTCTGCTTTGGCTGCATGC+AGG | 0.488388 | 7.1:-4395408 | MS.gene050839:CDS |
| CGTTGTCTAATGCACAGGGA+GGG | 0.490233 | 7.1:-4396899 | MS.gene050839:CDS |
| CCCCATCGCTGTCAAAGCTG+TGG | 0.491378 | 7.1:-4398498 | MS.gene050839:CDS |
| ATGTTAACGTCCTAAGTTGT+GGG | 0.494007 | 7.1:+4395071 | None:intergenic |
| TCTACATGAGACTCTTCCCC+TGG | 0.495012 | 7.1:+4397463 | None:intergenic |
| ATTCCTAATCTTGTTGTTGG+AGG | 0.495311 | 7.1:+4398171 | None:intergenic |
| TTCAGTGGCTGTTGATATGC+GGG | 0.499486 | 7.1:-4397152 | MS.gene050839:CDS |
| TGCGCAGTTCTAACAATCCA+TGG | 0.500070 | 7.1:+4397521 | None:intergenic |
| CAACCTCAACAGCAGTTCCT+AGG | 0.500091 | 7.1:+4397917 | None:intergenic |
| GATGTAAATACAGGAGGTCC+AGG | 0.503739 | 7.1:+4399177 | None:intergenic |
| TTCCTAATCTTGTTGTTGGA+GGG | 0.508270 | 7.1:+4398172 | None:intergenic |
| GGTGCTAAAATACTAGTTGA+AGG | 0.508863 | 7.1:+4399291 | None:intergenic |
| TCATCTATTACAAGAACTAC+TGG | 0.509134 | 7.1:+4398258 | None:intergenic |
| TGGAACAAAACCAGGTCGCT+TGG | 0.509710 | 7.1:+4398305 | None:intergenic |
| GCCCTCTCCTGAGATGGAAA+AGG | 0.510725 | 7.1:+4397023 | None:intergenic |
| CCAGTTGAGACCTCCCTACC+AGG | 0.512854 | 7.1:+4398543 | None:intergenic |
| GTTGTCTAATGCACAGGGAG+GGG | 0.514617 | 7.1:-4396898 | MS.gene050839:CDS |
| CCCATCGCTGTCAAAGCTGT+GGG | 0.516182 | 7.1:-4398497 | MS.gene050839:CDS |
| AAAGAATGAGGAACAGATCC+AGG | 0.517901 | 7.1:+4397784 | None:intergenic |
| AACAATAGATGAAAGAATCA+AGG | 0.519486 | 7.1:-4397128 | MS.gene050839:CDS |
| TGTCTCGAGGGGTTGTCAAA+AGG | 0.519625 | 7.1:-4397861 | MS.gene050839:CDS |
| CCCCACAGCTTTGACAGCGA+TGG | 0.520772 | 7.1:+4398496 | None:intergenic |
| ATTGGTCTCTCCTGGTAGGG+AGG | 0.521739 | 7.1:-4398553 | MS.gene050839:CDS |
| CCCACAGCTTTGACAGCGAT+GGG | 0.523958 | 7.1:+4398497 | None:intergenic |
| CAAGGATCCTCCTTATGAGC+AGG | 0.524003 | 7.1:-4395187 | MS.gene050839:intron |
| TCACTCAAGTTGTGGGTCCA+GGG | 0.527829 | 7.1:-4397480 | MS.gene050839:CDS |
| TCCAGAACTATCTTCACCAA+TGG | 0.527850 | 7.1:-4398349 | MS.gene050839:CDS |
| GCCTTCAGAGAATCTTCACT+TGG | 0.528830 | 7.1:+4398063 | None:intergenic |
| TATTCTCATCACTCAAGTTG+TGG | 0.529391 | 7.1:-4397488 | MS.gene050839:CDS |
| TTGGTTGATATATTATGTGC+TGG | 0.530155 | 7.1:-4397676 | MS.gene050839:CDS |
| TTAGAGGATCATATTCCAAA+TGG | 0.531231 | 7.1:-4399006 | MS.gene050839:CDS |
| GACATATAACACATTGCCAC+TGG | 0.532814 | 7.1:+4398433 | None:intergenic |
| GCTGAACTTGTAGCCGATGA+AGG | 0.532973 | 7.1:-4395439 | MS.gene050839:CDS |
| ACCGGTCATCAACTCGGTTG+AGG | 0.534312 | 7.1:+4394959 | None:intergenic |
| CGGACAGGAGATGTAAATAC+AGG | 0.535127 | 7.1:+4399168 | None:intergenic |
| ATTCTCATCACTCAAGTTGT+GGG | 0.536006 | 7.1:-4397487 | MS.gene050839:CDS |
| GTGAGGAACTGGACTGCCAT+TGG | 0.536352 | 7.1:+4399212 | None:intergenic |
| CATCTGCTGATCTGTCTCGA+GGG | 0.536757 | 7.1:-4397873 | MS.gene050839:CDS |
| GTTCGAAAAGGAATGGCAGC+TGG | 0.537523 | 7.1:+4399144 | None:intergenic |
| CTTTGGCGTTAATTTACAAA+GGG | 0.539608 | 7.1:-4397566 | MS.gene050839:CDS |
| TGGTTGACTTTGTTCAAACT+GGG | 0.540753 | 7.1:-4398329 | MS.gene050839:CDS |
| GATCCAGGCCCATAAGTGTT+CGG | 0.541419 | 7.1:+4397799 | None:intergenic |
| AGGCAAGGTTCCCACAACTT+AGG | 0.541674 | 7.1:-4395081 | MS.gene050839:CDS |
| CCATCTGCTGATCTGTCTCG+AGG | 0.546084 | 7.1:-4397874 | MS.gene050839:CDS |
| GGGATCGCGCTGTATTACCT+GGG | 0.546622 | 7.1:+4398518 | None:intergenic |
| AAAGACAGCATTGAAATGGA+TGG | 0.546652 | 7.1:-4397734 | MS.gene050839:CDS |
| TGTACCAGGCTGATGTCTCA+AGG | 0.547620 | 7.1:-4397291 | MS.gene050839:CDS |
| GGATACGAGGAGCTGGAAAA+CGG | 0.547993 | 7.1:+4395359 | None:intergenic |
| AAAACAGGAGGGTAGCTCGC+AGG | 0.549688 | 7.1:-4395244 | MS.gene050839:intron |
| GAAAACTGACCTTGAATGCA+AGG | 0.551532 | 7.1:+4395338 | None:intergenic |
| CTGAGATGGAAAAGGAGCTC+CGG | 0.552188 | 7.1:+4397031 | None:intergenic |
| AGTCGTACACCGACACGGTA+CGG | 0.552372 | 7.1:+4398136 | None:intergenic |
| TACCAGAAGCTTCCAGAGAT+CGG | 0.552628 | 7.1:-4397942 | MS.gene050839:CDS |
| TGATCTATCTCTCAGAATGG+TGG | 0.553190 | 7.1:-4396927 | MS.gene050839:CDS |
| GCATATCAACAGCCACTGAA+TGG | 0.553857 | 7.1:+4397155 | None:intergenic |
| AGTAGAATTATTGTCTGTGC+CGG | 0.554452 | 7.1:-4397826 | MS.gene050839:CDS |
| AAAACTTCATTGTTTCCCAA+AGG | 0.556109 | 7.1:-4397068 | MS.gene050839:CDS |
| GCTTCCAGAGATCGGTGCCT+AGG | 0.556110 | 7.1:-4397934 | MS.gene050839:CDS |
| ATAGTGGCCCTCTCCTGAGA+TGG | 0.556546 | 7.1:+4397017 | None:intergenic |
| GAAGAGGCTGAGGAACGAGC+CGG | 0.557105 | 7.1:+4399099 | None:intergenic |
| AATGCAAGGATACGAGGAGC+TGG | 0.557311 | 7.1:+4395352 | None:intergenic |
| GATGTTAACGTCCTAAGTTG+TGG | 0.558972 | 7.1:+4395070 | None:intergenic |
| TAGAAATAGGTTCCTCAGCA+CGG | 0.559759 | 7.1:+4396961 | None:intergenic |
| CACTCAAGTTGTGGGTCCAG+GGG | 0.560885 | 7.1:-4397479 | MS.gene050839:CDS |
| ACTATATGGCCGTACCGTGT+CGG | 0.562058 | 7.1:-4398145 | MS.gene050839:CDS |
| CCTTTGTAAATTAACGCCAA+AGG | 0.566259 | 7.1:+4397567 | None:intergenic |
| AGAATTATTGTCTGTGCCGG+TGG | 0.566565 | 7.1:-4397823 | MS.gene050839:CDS |
| GTTTGAACAAAGTCAACCAT+TGG | 0.567196 | 7.1:+4398333 | None:intergenic |
| TAAGGAGGATCCTTGTGAGC+TGG | 0.568588 | 7.1:+4395195 | None:intergenic |
| TGAATGGATGCGAAGTTTGA+AGG | 0.569935 | 7.1:-4394990 | MS.gene050839:CDS |
| TGTCTAATGCACAGGGAGGG+GGG | 0.572598 | 7.1:-4396896 | MS.gene050839:CDS |
| CTCGAGACAGATCAGCAGAT+GGG | 0.572727 | 7.1:+4397875 | None:intergenic |
| TCAGTATTCAAATGTGTACC+AGG | 0.573423 | 7.1:-4397305 | MS.gene050839:CDS |
| ACCTTGAATGCAAGGATACG+AGG | 0.575322 | 7.1:+4395346 | None:intergenic |
| AGCCGGCGGCTGAGGCGAAG+CGG | 0.575683 | 7.1:+4399116 | None:intergenic |
| AAAATACTAGTTGAAGGAGG+AGG | 0.575861 | 7.1:+4399297 | None:intergenic |
| CCTTTGGCGTTAATTTACAA+AGG | 0.578294 | 7.1:-4397567 | MS.gene050839:CDS |
| TAACGTGGTGGCGACGAGGT+TGG | 0.579731 | 7.1:+4399072 | None:intergenic |
| TTAGGGTGGTTAAAAGAATG+AGG | 0.583364 | 7.1:+4397772 | None:intergenic |
| CAAACTGGGACCAAGCGACC+TGG | 0.585466 | 7.1:-4398315 | MS.gene050839:CDS |
| AGGAGCTGGAAAACGGAACT+CGG | 0.585658 | 7.1:+4395366 | None:intergenic |
| AAATGAAGACATCAGTTCCA+TGG | 0.585675 | 7.1:+4396810 | None:intergenic |
| GTGCCTAGGAACTGCTGTTG+AGG | 0.588652 | 7.1:-4397920 | MS.gene050839:CDS |
| CCATATACGGATAATTAGGG+TGG | 0.590910 | 7.1:+4397758 | None:intergenic |
| ACGTCTCATACCAGCTCACA+AGG | 0.591329 | 7.1:-4395205 | MS.gene050839:CDS |
| CGACGAGGTTGGCAAAGAAG+AGG | 0.593237 | 7.1:+4399083 | None:intergenic |
| ACAGCCAGTGAAGCATGCAT+TGG | 0.593600 | 7.1:+4398009 | None:intergenic |
| ACCAAGTGAAGATTCTCTGA+AGG | 0.595515 | 7.1:-4398064 | MS.gene050839:CDS |
| AACTTGTGACTGTAAGTCAA+AGG | 0.596093 | 7.1:+4399038 | None:intergenic |
| GAGGGGTTGTCAAAAGGTCA+GGG | 0.596155 | 7.1:-4397855 | MS.gene050839:CDS |
| AACAGCAGTATCAGACTGCA+TGG | 0.601478 | 7.1:+4396841 | None:intergenic |
| CTCTGAAGATGCTGTAAGTG+AGG | 0.601963 | 7.1:+4398222 | None:intergenic |
| GAAGCGGGTGAAGTTCGAAA+AGG | 0.603900 | 7.1:+4399132 | None:intergenic |
| TTGTTTACCTGCTCATAAGG+AGG | 0.608131 | 7.1:+4395180 | None:intergenic |
| ATCTGCTGATGTGCTTCCTG+GGG | 0.608232 | 7.1:-4398094 | MS.gene050839:CDS |
| ATTCAGTGGCTGTTGATATG+CGG | 0.608901 | 7.1:-4397153 | MS.gene050839:CDS |
| TTGAGTGATGAGAATATCGT+CGG | 0.609074 | 7.1:+4397495 | None:intergenic |
| CCTCGAGACAGATCAGCAGA+TGG | 0.609962 | 7.1:+4397874 | None:intergenic |
| GGGTGAAGTTCGAAAAGGAA+TGG | 0.611406 | 7.1:+4399137 | None:intergenic |
| GGTTGGCAAAGAAGAGGCTG+AGG | 0.612080 | 7.1:+4399089 | None:intergenic |
| GGATCGCGCTGTATTACCTG+GGG | 0.612217 | 7.1:+4398519 | None:intergenic |
| TCCTCGTTGTCTAATGCACA+GGG | 0.614480 | 7.1:-4396903 | MS.gene050839:CDS |
| ATCTGCTGATCTGTCTCGAG+GGG | 0.616232 | 7.1:-4397872 | MS.gene050839:CDS |
| AAGACTACCGGTCATCAACT+CGG | 0.617722 | 7.1:+4394953 | None:intergenic |
| TGAGTAACGTGGTGGCGACG+AGG | 0.621614 | 7.1:+4399068 | None:intergenic |
| TTAAGATAGGAACTCTTACA+GGG | 0.623544 | 7.1:+4397647 | None:intergenic |
| TTACAGTCACAAGTTTCTGG+TGG | 0.623640 | 7.1:-4399030 | MS.gene050839:CDS |
| TGCATGGCAAGATCATAAGC+CGG | 0.625214 | 7.1:+4396857 | None:intergenic |
| GAGGCTGAGGAACGAGCCGG+CGG | 0.625710 | 7.1:+4399102 | None:intergenic |
| GAAAAGGAATGGCAGCTGGA+CGG | 0.630753 | 7.1:+4399148 | None:intergenic |
| GCGCAGTTCTAACAATCCAT+GGG | 0.632718 | 7.1:+4397522 | None:intergenic |
| TAAATACAGGAGGTCCAGGA+GGG | 0.633212 | 7.1:+4399181 | None:intergenic |
| GATCAAACTTCATCTGCCAA+TGG | 0.633558 | 7.1:-4399228 | MS.gene050839:CDS |
| CCCGAAACACTATCTACTGT+AGG | 0.633775 | 7.1:+4397250 | None:intergenic |
| AAGATGAGAGGTCCGTGCTG+AGG | 0.633786 | 7.1:-4396973 | MS.gene050839:CDS |
| CCTCTTGCAAAAGCATCAGG+TGG | 0.634824 | 7.1:-4397622 | MS.gene050839:CDS |
| TGAAAGTGTTCAGGATGAAG+TGG | 0.642203 | 7.1:-4397221 | MS.gene050839:CDS |
| ACTGCTGTTGTACTTGACCA+TGG | 0.642492 | 7.1:-4396827 | MS.gene050839:CDS |
| TCTGAAACTGGAACAAAACC+AGG | 0.643903 | 7.1:+4398297 | None:intergenic |
| GGTGGAGGAAATCTAGGTGG+TGG | 0.646706 | 7.1:+4399270 | None:intergenic |
| GTACCAGGCTGATGTCTCAA+GGG | 0.647899 | 7.1:-4397290 | MS.gene050839:CDS |
| GCTAAAATACTAGTTGAAGG+AGG | 0.651512 | 7.1:+4399294 | None:intergenic |
| GGTCATCAACTCGGTTGAGG+TGG | 0.652167 | 7.1:+4394962 | None:intergenic |
| TAGCATTTGAATATAAAGAG+CGG | 0.653919 | 7.1:+4397414 | None:intergenic |
| ATGAGCTGAGAAAAGTACAA+AGG | 0.656593 | 7.1:+4398975 | None:intergenic |
| CGAAAACTGAATGCAAGTGA+TGG | 0.657106 | 7.1:-4398411 | MS.gene050839:CDS |
| AATGCCCCAAAACCCAAACT+GGG | 0.659386 | 7.1:+4398573 | None:intergenic |
| CGACCCTTGAGACATCAGCC+TGG | 0.660436 | 7.1:+4397287 | None:intergenic |
| GTAAATACAGGAGGTCCAGG+AGG | 0.661317 | 7.1:+4399180 | None:intergenic |
| TCGTTGTCTAATGCACAGGG+AGG | 0.663454 | 7.1:-4396900 | MS.gene050839:CDS |
| TTATTGGCCATGAAGATGAG+AGG | 0.665625 | 7.1:-4396985 | MS.gene050839:CDS |
| TTGTGAGCTGGTATGAGACG+TGG | 0.668618 | 7.1:+4395207 | None:intergenic |
| CCAGGAGGGGTACTCAAGTG+AGG | 0.670383 | 7.1:+4399195 | None:intergenic |
| GCTCTCTCTATGGAAACCAA+AGG | 0.671019 | 7.1:-4397367 | MS.gene050839:CDS |
| TATTGCTTGGATCAGGCCAG+TGG | 0.671309 | 7.1:-4398449 | MS.gene050839:CDS |
| CCACAGCTTTGACAGCGATG+GGG | 0.674421 | 7.1:+4398498 | None:intergenic |
| GATGGAGAATTTAGGTCGCG+AGG | 0.676010 | 7.1:-4397716 | MS.gene050839:CDS |
| AAATACAGGAGGTCCAGGAG+GGG | 0.683733 | 7.1:+4399182 | None:intergenic |
| GGGGTTGTCAAAAGGTCAGG+GGG | 0.691190 | 7.1:-4397853 | MS.gene050839:CDS |
| ATTGGTGGAGGAAATCTAGG+TGG | 0.691906 | 7.1:+4399267 | None:intergenic |
| AGGGGTTGTCAAAAGGTCAG+GGG | 0.692424 | 7.1:-4397854 | MS.gene050839:CDS |
| ACGAGCCAAGAACCATTCAG+TGG | 0.695755 | 7.1:-4397167 | MS.gene050839:CDS |
| ACAGGAGATGTAAATACAGG+AGG | 0.703342 | 7.1:+4399171 | None:intergenic |
| GATCCATTTGAGTAACGTGG+TGG | 0.707026 | 7.1:+4399060 | None:intergenic |
| CCATCGCTGTCAAAGCTGTG+GGG | 0.707531 | 7.1:-4398496 | MS.gene050839:CDS |
| AAGGATCCATTTGAGTAACG+TGG | 0.710338 | 7.1:+4399057 | None:intergenic |
| TGTGAGCTGGTATGAGACGT+GGG | 0.714877 | 7.1:+4395208 | None:intergenic |
| GATCGCGCTGTATTACCTGG+GGG | 0.731713 | 7.1:+4398520 | None:intergenic |
| TCCCTGTGCATTAGACAACG+AGG | 0.756815 | 7.1:+4396902 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAAAAAAATATAATT+TGG | + | chr7.1:4395680-4395699 | None:intergenic | 0.0% |
| !! | AAACAAAACAACAAATTTAT+AGG | + | chr7.1:4398114-4398133 | None:intergenic | 15.0% |
| !! | ATGTATATACAAAAGTTTAT+AGG | + | chr7.1:4398566-4398585 | None:intergenic | 15.0% |
| !! | GTAAAATTATAATTAAAACC+AGG | - | chr7.1:4398700-4398719 | MS.gene050839:intron | 15.0% |
| !!! | AAAATTGTTGCATTTTATTT+TGG | - | chr7.1:4398033-4398052 | MS.gene050839:CDS | 15.0% |
| !!! | AAATGTAGTATAATTGATTT+AGG | + | chr7.1:4397685-4397704 | None:intergenic | 15.0% |
| !! | AAACAAACAGAACAAAAATA+TGG | + | chr7.1:4398842-4398861 | None:intergenic | 20.0% |
| !! | AAAGTCCAAATATGTAATTT+AGG | + | chr7.1:4398373-4398392 | None:intergenic | 20.0% |
| !! | AGAGAAAGAAACTAAAAATA+TGG | + | chr7.1:4398807-4398826 | None:intergenic | 20.0% |
| !! | AGATTAGGAATTATACTATA+TGG | - | chr7.1:4396195-4396214 | MS.gene050839:intron | 20.0% |
| !! | ATAAAAACTATAAACTACTC+CGG | + | chr7.1:4395559-4395578 | None:intergenic | 20.0% |
| !! | ATTTGCCTAAATTACATATT+TGG | - | chr7.1:4398365-4398384 | MS.gene050839:CDS | 20.0% |
| !! | TATATACAAAAGTTTATAGG+AGG | + | chr7.1:4398563-4398582 | None:intergenic | 20.0% |
| !! | TCTTTCTGTAATTGTAATAT+TGG | + | chr7.1:4395108-4395127 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAACTTGTTCTGA+TGG | - | chr7.1:4398217-4398236 | MS.gene050839:CDS | 20.0% |
| !!! | AAACAATGAAGTTTTGATTT+GGG | + | chr7.1:4397281-4397300 | None:intergenic | 20.0% |
| !!! | AATTTACATTTTAAAACAGG+AGG | - | chr7.1:4399098-4399117 | MS.gene050839:CDS | 20.0% |
| !!! | ATAAAATGCAACAATTTTGT+TGG | + | chr7.1:4398031-4398050 | None:intergenic | 20.0% |
| !!! | ATTCTTTTCATTTGATAAGT+AGG | - | chr7.1:4395729-4395748 | MS.gene050839:intron | 20.0% |
| !!! | ATTTACATTTTAAAACAGGA+GGG | - | chr7.1:4399099-4399118 | MS.gene050839:CDS | 20.0% |
| !!! | CTGAATTTACATTTTAAAAC+AGG | - | chr7.1:4399095-4399114 | MS.gene050839:CDS | 20.0% |
| !!! | CTGTAATTTTTCTTCTTTAT+CGG | - | chr7.1:4398275-4398294 | MS.gene050839:CDS | 20.0% |
| !!! | TAAATTACTTATTTTTGTGC+AGG | - | chr7.1:4399250-4399269 | MS.gene050839:CDS | 20.0% |
| !!! | TTATTTAGAACAAACACATT+TGG | + | chr7.1:4399233-4399252 | None:intergenic | 20.0% |
| ! | AAATCCATCCATAACATATA+AGG | + | chr7.1:4398887-4398906 | None:intergenic | 25.0% |
| ! | AACAATAGATGAAAGAATCA+AGG | - | chr7.1:4397226-4397245 | MS.gene050839:CDS | 25.0% |
| ! | AAGGAAATTGCATGTATATT+GGG | + | chr7.1:4398868-4398887 | None:intergenic | 25.0% |
| ! | AGAAATGAAGATGAAAAATG+AGG | + | chr7.1:4397908-4397927 | None:intergenic | 25.0% |
| ! | ATATATTGCAACATATTGCT+TGG | - | chr7.1:4395892-4395911 | MS.gene050839:intron | 25.0% |
| ! | ATCTGTAGACTTTAAATACA+AGG | + | chr7.1:4398331-4398350 | None:intergenic | 25.0% |
| ! | ATTATATGCAAAAGAGCAAA+GGG | + | chr7.1:4398147-4398166 | None:intergenic | 25.0% |
| ! | ATTTCCTTATATGTTATGGA+TGG | - | chr7.1:4398880-4398899 | MS.gene050839:intron | 25.0% |
| ! | CAAAAGATGCATTTAGAAAT+AGG | + | chr7.1:4397409-4397428 | None:intergenic | 25.0% |
| ! | TAAGGAAATTGCATGTATAT+TGG | + | chr7.1:4398869-4398888 | None:intergenic | 25.0% |
| ! | TAGCATTTGAATATAAAGAG+CGG | + | chr7.1:4396943-4396962 | None:intergenic | 25.0% |
| ! | TATTATATGCAAAAGAGCAA+AGG | + | chr7.1:4398148-4398167 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATTCAAAC+AGG | + | chr7.1:4395460-4395479 | None:intergenic | 25.0% |
| ! | TCAATGTAAGATAATTAAGC+AGG | + | chr7.1:4395414-4395433 | None:intergenic | 25.0% |
| ! | TGCAATTTCCTTATATGTTA+TGG | - | chr7.1:4398876-4398895 | MS.gene050839:intron | 25.0% |
| ! | TTCTGTAATTGTAATATTGG+TGG | + | chr7.1:4395105-4395124 | None:intergenic | 25.0% |
| ! | TTTCCATATACGGATAATTA+GGG | + | chr7.1:4396602-4396621 | None:intergenic | 25.0% |
| !! | AAGGATATTGGTCTAAAATT+TGG | - | chr7.1:4397245-4397264 | MS.gene050839:CDS | 25.0% |
| !! | ATAATTCCTAATCTTGTTGT+TGG | + | chr7.1:4396189-4396208 | None:intergenic | 25.0% |
| !! | CATTTTCTTAGTTGAAGATA+TGG | - | chr7.1:4397602-4397621 | MS.gene050839:CDS | 25.0% |
| !! | TTTTCCATATACGGATAATT+AGG | + | chr7.1:4396603-4396622 | None:intergenic | 25.0% |
| !!! | AAGTTTTGATTTGGGTAATT+GGG | + | chr7.1:4397273-4397292 | None:intergenic | 25.0% |
| !!! | AGAAAAAAGGTTAGTTTTCA+TGG | - | chr7.1:4397769-4397788 | MS.gene050839:CDS | 25.0% |
| !!! | AGTATTTTTTTTTCCTCAAG+GGG | - | chr7.1:4398240-4398259 | MS.gene050839:CDS | 25.0% |
| !!! | GAAACAATGAAGTTTTGATT+TGG | + | chr7.1:4397282-4397301 | None:intergenic | 25.0% |
| !!! | GAGTATTTTTTTTTCCTCAA+GGG | - | chr7.1:4398239-4398258 | MS.gene050839:CDS | 25.0% |
| !!! | GTCGTTTTTAAATGTTTCAT+GGG | + | chr7.1:4396919-4396938 | None:intergenic | 25.0% |
| !!! | TCTTCTTTTGTTTTTTCCAA+TGG | - | chr7.1:4397925-4397944 | MS.gene050839:CDS | 25.0% |
| AAAACAACATGAACAATTGC+TGG | + | chr7.1:4397717-4397736 | None:intergenic | 30.0% | |
| AAAACTTCATTGTTTCCCAA+AGG | - | chr7.1:4397286-4397305 | MS.gene050839:CDS | 30.0% | |
| AAATACTCGTGAAACTGTTT+GGG | - | chr7.1:4395499-4395518 | MS.gene050839:intron | 30.0% | |
| AATACCCTCTAAACCATAAA+AGG | + | chr7.1:4397650-4397669 | None:intergenic | 30.0% | |
| ACAATATACTGCAATGCAAA+AGG | - | chr7.1:4398634-4398653 | MS.gene050839:intron | 30.0% | |
| AGATGAAAAATGAGGAAACA+AGG | + | chr7.1:4397900-4397919 | None:intergenic | 30.0% | |
| CTTTGGCGTTAATTTACAAA+GGG | - | chr7.1:4396788-4396807 | MS.gene050839:intron | 30.0% | |
| GATGAAAGAATCAAGGATAT+TGG | - | chr7.1:4397233-4397252 | MS.gene050839:CDS | 30.0% | |
| TAAATACTCGTGAAACTGTT+TGG | - | chr7.1:4395498-4395517 | MS.gene050839:intron | 30.0% | |
| TCATCTATTACAAGAACTAC+TGG | + | chr7.1:4396099-4396118 | None:intergenic | 30.0% | |
| TGTAACCTGTGATAGAAAAA+AGG | - | chr7.1:4397756-4397775 | MS.gene050839:CDS | 30.0% | |
| TGTAATTGTAATATTGGTGG+AGG | + | chr7.1:4395102-4395121 | None:intergenic | 30.0% | |
| TTAAGATAGGAACTCTTACA+GGG | + | chr7.1:4396710-4396729 | None:intergenic | 30.0% | |
| TTAGAGGATCATATTCCAAA+TGG | - | chr7.1:4395348-4395367 | MS.gene050839:CDS | 30.0% | |
| TTGAAATGGATGGAGAATTT+AGG | - | chr7.1:4396630-4396649 | MS.gene050839:intron | 30.0% | |
| TTGAATACTGAATTGCAAAC+TGG | + | chr7.1:4397040-4397059 | None:intergenic | 30.0% | |
| ! | AATGCTGTCTTTTCCATATA+CGG | + | chr7.1:4396612-4396631 | None:intergenic | 30.0% |
| ! | ATTGTCCTTTTATGGTTTAG+AGG | - | chr7.1:4397642-4397661 | MS.gene050839:CDS | 30.0% |
| ! | TAATAATGTGCAGTATTGAG+TGG | - | chr7.1:4397857-4397876 | MS.gene050839:CDS | 30.0% |
| ! | TTGGTTGATATATTATGTGC+TGG | - | chr7.1:4396678-4396697 | MS.gene050839:intron | 30.0% |
| ! | TTGTCCTTTTATGGTTTAGA+GGG | - | chr7.1:4397643-4397662 | MS.gene050839:CDS | 30.0% |
| ! | TTTAAGATAGGAACTCTTAC+AGG | + | chr7.1:4396711-4396730 | None:intergenic | 30.0% |
| ! | TTTGCAAGAGGATTTAAGAT+AGG | + | chr7.1:4396723-4396742 | None:intergenic | 30.0% |
| ! | TTTTGATCTATCTCTCAGAA+TGG | - | chr7.1:4397424-4397443 | MS.gene050839:CDS | 30.0% |
| !! | ATGTTATGGATGGATTTTCT+AGG | - | chr7.1:4398890-4398909 | MS.gene050839:intron | 30.0% |
| !! | TGTTATGGATGGATTTTCTA+GGG | - | chr7.1:4398891-4398910 | MS.gene050839:intron | 30.0% |
| !! | TTGGTTCTTCATGATGATTT+TGG | - | chr7.1:4396759-4396778 | MS.gene050839:intron | 30.0% |
| !!! | AAGGTTAGTTTTCATGGTAA+TGG | - | chr7.1:4397775-4397794 | MS.gene050839:CDS | 30.0% |
| !!! | ACTAACCTTTTTTCTATCAC+AGG | + | chr7.1:4397764-4397783 | None:intergenic | 30.0% |
| !!! | ATGGTTTAGAGGGTATTTTT+GGG | - | chr7.1:4397653-4397672 | MS.gene050839:CDS | 30.0% |
| !!! | ATTACTTATTTTTGTGCAGG+AGG | - | chr7.1:4399253-4399272 | MS.gene050839:CDS | 30.0% |
| !!! | CGTCGTTTTTAAATGTTTCA+TGG | + | chr7.1:4396920-4396939 | None:intergenic | 30.0% |
| !!! | GAAGTTTTGATTTGGGTAAT+TGG | + | chr7.1:4397274-4397293 | None:intergenic | 30.0% |
| !!! | GGAGTATTTTTTTTTCCTCA+AGG | - | chr7.1:4398238-4398257 | MS.gene050839:CDS | 30.0% |
| !!! | TATGGTTTAGAGGGTATTTT+TGG | - | chr7.1:4397652-4397671 | MS.gene050839:CDS | 30.0% |
| AAAATACTAGTTGAAGGAGG+AGG | + | chr7.1:4395060-4395079 | None:intergenic | 35.0% | |
| AAATGAAGACATCAGTTCCA+TGG | + | chr7.1:4397547-4397566 | None:intergenic | 35.0% | |
| AACTTGTGACTGTAAGTCAA+AGG | + | chr7.1:4395319-4395338 | None:intergenic | 35.0% | |
| AATATTGGTGGAGGAAATCT+AGG | + | chr7.1:4395093-4395112 | None:intergenic | 35.0% | |
| ACACCAGGAATGAATAATGA+AGG | + | chr7.1:4399043-4399062 | None:intergenic | 35.0% | |
| AGTAGAATTATTGTCTGTGC+CGG | - | chr7.1:4396528-4396547 | MS.gene050839:intron | 35.0% | |
| ATCAGCTGTTTAAGCAAACA+GGG | - | chr7.1:4395654-4395673 | MS.gene050839:intron | 35.0% | |
| ATGGAACTGATGTCTTCATT+TGG | - | chr7.1:4397546-4397565 | MS.gene050839:CDS | 35.0% | |
| ATGTTAACGTCCTAAGTTGT+GGG | + | chr7.1:4399286-4399305 | None:intergenic | 35.0% | |
| CACAGTTTCAATCAATATCC+TGG | + | chr7.1:4398721-4398740 | None:intergenic | 35.0% | |
| CCATCAGAACCAGTTATTTA+TGG | + | chr7.1:4398185-4398204 | None:intergenic | 35.0% | |
| CCTTTGGCGTTAATTTACAA+AGG | - | chr7.1:4396787-4396806 | MS.gene050839:intron | 35.0% | |
| CCTTTGTAAATTAACGCCAA+AGG | + | chr7.1:4396790-4396809 | None:intergenic | 35.0% | |
| CTTTATCGGATGCTTGAATA+AGG | - | chr7.1:4398289-4398308 | MS.gene050839:CDS | 35.0% | |
| GCTAAAATACTAGTTGAAGG+AGG | + | chr7.1:4395063-4395082 | None:intergenic | 35.0% | |
| GGTGCTAAAATACTAGTTGA+AGG | + | chr7.1:4395066-4395085 | None:intergenic | 35.0% | |
| GTCATTGCGTTATGAAATGT+AGG | - | chr7.1:4397807-4397826 | MS.gene050839:CDS | 35.0% | |
| GTTTGAACAAAGTCAACCAT+TGG | + | chr7.1:4396024-4396043 | None:intergenic | 35.0% | |
| TAAAGTTTCTTCTGCCTATG+TGG | - | chr7.1:4398598-4398617 | MS.gene050839:CDS | 35.0% | |
| TCAGTATTCAAATGTGTACC+AGG | - | chr7.1:4397049-4397068 | MS.gene050839:CDS | 35.0% | |
| TCATCAATTTGATGCCACAT+AGG | + | chr7.1:4398615-4398634 | None:intergenic | 35.0% | |
| TCTCCTTCATTATTCATTCC+TGG | - | chr7.1:4399037-4399056 | MS.gene050839:CDS | 35.0% | |
| TCTGGTACGTTCAACTTATA+CGG | + | chr7.1:4396399-4396418 | None:intergenic | 35.0% | |
| TTACAACATAGTTTCCCACA+TGG | + | chr7.1:4398684-4398703 | None:intergenic | 35.0% | |
| TTAGGGTGGTTAAAAGAATG+AGG | + | chr7.1:4396585-4396604 | None:intergenic | 35.0% | |
| TTGAGTGATGAGAATATCGT+CGG | + | chr7.1:4396862-4396881 | None:intergenic | 35.0% | |
| TTGTATTTCTTCAGCTTGTG+TGG | - | chr7.1:4398757-4398776 | MS.gene050839:intron | 35.0% | |
| ! | AAAGACAGCATTGAAATGGA+TGG | - | chr7.1:4396620-4396639 | MS.gene050839:intron | 35.0% |
| ! | ATGAGCTGAGAAAAGTACAA+AGG | + | chr7.1:4395382-4395401 | None:intergenic | 35.0% |
| ! | ATGCAACAATTTTGTTGGCA+AGG | + | chr7.1:4398026-4398045 | None:intergenic | 35.0% |
| ! | ATGGTTGACTTTGTTCAAAC+TGG | - | chr7.1:4396024-4396043 | MS.gene050839:intron | 35.0% |
| ! | ATTCTCATCACTCAAGTTGT+GGG | - | chr7.1:4396867-4396886 | MS.gene050839:CDS | 35.0% |
| ! | GTTGCTCTTGCTATAATTCA+GGG | - | chr7.1:4396456-4396475 | MS.gene050839:intron | 35.0% |
| ! | TATTCTCATCACTCAAGTTG+TGG | - | chr7.1:4396866-4396885 | MS.gene050839:CDS | 35.0% |
| ! | TGCTGATTGCCATAAATAAC+TGG | - | chr7.1:4398173-4398192 | MS.gene050839:CDS | 35.0% |
| ! | TGGAAAAGACAGCATTGAAA+TGG | - | chr7.1:4396616-4396635 | MS.gene050839:intron | 35.0% |
| ! | TGGTTGACTTTGTTCAAACT+GGG | - | chr7.1:4396025-4396044 | MS.gene050839:intron | 35.0% |
| ! | TGTACTTTTCTCAGCTCATA+AGG | - | chr7.1:4395383-4395402 | MS.gene050839:CDS | 35.0% |
| ! | TTGCAGTCATTGTCCTTTTA+TGG | - | chr7.1:4397634-4397653 | MS.gene050839:CDS | 35.0% |
| ! | TTTTACAAGAAGATGACACC+AGG | + | chr7.1:4399058-4399077 | None:intergenic | 35.0% |
| !! | ACGTTTGTTATGACTGAAAC+TGG | + | chr7.1:4398409-4398428 | None:intergenic | 35.0% |
| !! | ATCACTTTTGATGTCTCCTT+TGG | + | chr7.1:4397006-4397025 | None:intergenic | 35.0% |
| !! | ATTCCTAATCTTGTTGTTGG+AGG | + | chr7.1:4396186-4396205 | None:intergenic | 35.0% |
| !! | CCATAAATAACTGGTTCTGA+TGG | - | chr7.1:4398182-4398201 | MS.gene050839:CDS | 35.0% |
| !! | CGTTTGTTATGACTGAAACT+GGG | + | chr7.1:4398408-4398427 | None:intergenic | 35.0% |
| !! | GTTTTTGTTCTGGGTTTGAT+GGG | + | chr7.1:4395008-4395027 | None:intergenic | 35.0% |
| !! | TGTTTTTGTTCTGGGTTTGA+TGG | + | chr7.1:4395009-4395028 | None:intergenic | 35.0% |
| !! | TTCCTAATCTTGTTGTTGGA+GGG | + | chr7.1:4396185-4396204 | None:intergenic | 35.0% |
| !!! | AGAAGCACTTTTTCCTTCAT+CGG | + | chr7.1:4398931-4398950 | None:intergenic | 35.0% |
| !!! | ATTGGAGTCTGTTTTTGTTC+TGG | + | chr7.1:4395018-4395037 | None:intergenic | 35.0% |
| !!! | TTGGAGTCTGTTTTTGTTCT+GGG | + | chr7.1:4395017-4395036 | None:intergenic | 35.0% |
| AAAGAATGAGGAACAGATCC+AGG | + | chr7.1:4396573-4396592 | None:intergenic | 40.0% | |
| AAAGGAGCTTTCTCTCTTAC+CGG | - | chr7.1:4397304-4397323 | MS.gene050839:CDS | 40.0% | |
| AACCCAACACAACCTAATGT+TGG | - | chr7.1:4394976-4394995 | MS.gene050839:CDS | 40.0% | |
| AACTGATGTCTTCATTTGGC+TGG | - | chr7.1:4397550-4397569 | MS.gene050839:CDS | 40.0% | |
| AAGGATCCATTTGAGTAACG+TGG | + | chr7.1:4395300-4395319 | None:intergenic | 40.0% | |
| AAGGCTTTGCTTTATGGTAC+AGG | - | chr7.1:4396309-4396328 | MS.gene050839:intron | 40.0% | |
| ACAAAGGATGACTCTCCATT+TGG | + | chr7.1:4395366-4395385 | None:intergenic | 40.0% | |
| ACAAGCAAATGTACCCAGTT+TGG | - | chr7.1:4395768-4395787 | MS.gene050839:intron | 40.0% | |
| ACAGGAGATGTAAATACAGG+AGG | + | chr7.1:4395186-4395205 | None:intergenic | 40.0% | |
| ACCAAGTGAAGATTCTCTGA+AGG | - | chr7.1:4396290-4396309 | MS.gene050839:intron | 40.0% | |
| ACCATTGGTGAAGATAGTTC+TGG | + | chr7.1:4396009-4396028 | None:intergenic | 40.0% | |
| ACCCAACACAACCTAATGTT+GGG | - | chr7.1:4394977-4394996 | MS.gene050839:CDS | 40.0% | |
| ACGATCCAAGTTTCTGTGAA+TGG | - | chr7.1:4399348-4399367 | MS.gene050839:CDS | 40.0% | |
| ATATGCAAAAGAGCAAAGGG+CGG | + | chr7.1:4398144-4398163 | None:intergenic | 40.0% | |
| ATTCAGTGGCTGTTGATATG+CGG | - | chr7.1:4397201-4397220 | MS.gene050839:CDS | 40.0% | |
| CAAGCAAATGTACCCAGTTT+GGG | - | chr7.1:4395769-4395788 | MS.gene050839:intron | 40.0% | |
| CCAATAATGCATCCCAATAG+TGG | + | chr7.1:4397356-4397375 | None:intergenic | 40.0% | |
| CCACCCTAATTATCCGTATA+TGG | - | chr7.1:4396596-4396615 | MS.gene050839:intron | 40.0% | |
| CCACTATTGGGATGCATTAT+TGG | - | chr7.1:4397353-4397372 | MS.gene050839:CDS | 40.0% | |
| CCATATACGGATAATTAGGG+TGG | + | chr7.1:4396599-4396618 | None:intergenic | 40.0% | |
| CCTACAGTAGATAGTGTTTC+GGG | - | chr7.1:4397104-4397123 | MS.gene050839:CDS | 40.0% | |
| CGAAAACTGAATGCAAGTGA+TGG | - | chr7.1:4395943-4395962 | MS.gene050839:intron | 40.0% | |
| CGGCGTCAATGATGAAAATA+TGG | + | chr7.1:4396379-4396398 | None:intergenic | 40.0% | |
| GAAAACTGACCTTGAATGCA+AGG | + | chr7.1:4399019-4399038 | None:intergenic | 40.0% | |
| GACATATAACACATTGCCAC+TGG | + | chr7.1:4395924-4395943 | None:intergenic | 40.0% | |
| GACTTACAGTCACAAGTTTC+TGG | - | chr7.1:4395321-4395340 | MS.gene050839:intron | 40.0% | |
| GATCAAACTTCATCTGCCAA+TGG | - | chr7.1:4395126-4395145 | MS.gene050839:intron | 40.0% | |
| GATCAGCTGTTTAAGCAAAC+AGG | - | chr7.1:4395653-4395672 | MS.gene050839:intron | 40.0% | |
| GATGATTGTCTGAATCAACG+TGG | - | chr7.1:4398055-4398074 | MS.gene050839:CDS | 40.0% | |
| GATGTTAACGTCCTAAGTTG+TGG | + | chr7.1:4399287-4399306 | None:intergenic | 40.0% | |
| GCCTACAGTAGATAGTGTTT+CGG | - | chr7.1:4397103-4397122 | MS.gene050839:CDS | 40.0% | |
| GGCTCATCGACACAATATAT+TGG | - | chr7.1:4396659-4396678 | MS.gene050839:intron | 40.0% | |
| GTAAGAGAGAAAGCTCCTTT+GGG | + | chr7.1:4397304-4397323 | None:intergenic | 40.0% | |
| TAAAAAGTCGTACACCGACA+CGG | + | chr7.1:4396226-4396245 | None:intergenic | 40.0% | |
| TAGAAATAGGTTCCTCAGCA+CGG | + | chr7.1:4397396-4397415 | None:intergenic | 40.0% | |
| TATCGGATGCTTGAATAAGG+CGG | - | chr7.1:4398292-4398311 | MS.gene050839:CDS | 40.0% | |
| TATTTCTTCAGCTTGTGTGG+TGG | - | chr7.1:4398760-4398779 | MS.gene050839:intron | 40.0% | |
| TCCAGAACTATCTTCACCAA+TGG | - | chr7.1:4396005-4396024 | MS.gene050839:intron | 40.0% | |
| TCTATCACAGGTTACACAAC+AGG | + | chr7.1:4397752-4397771 | None:intergenic | 40.0% | |
| TGAATGGATGCGAAGTTTGA+AGG | - | chr7.1:4399364-4399383 | MS.gene050839:CDS | 40.0% | |
| TGATCTATCTCTCAGAATGG+TGG | - | chr7.1:4397427-4397446 | MS.gene050839:CDS | 40.0% | |
| TGCAACATATTGCTTGGATC+AGG | - | chr7.1:4395898-4395917 | MS.gene050839:intron | 40.0% | |
| TGTAGGAACAGTAGTTAGTC+TGG | - | chr7.1:4397824-4397843 | MS.gene050839:CDS | 40.0% | |
| TTATTGGCCATGAAGATGAG+AGG | - | chr7.1:4397369-4397388 | MS.gene050839:CDS | 40.0% | |
| TTGTTTACCTGCTCATAAGG+AGG | + | chr7.1:4399177-4399196 | None:intergenic | 40.0% | |
| ! | AACCCAACATTAGGTTGTGT+TGG | + | chr7.1:4394982-4395001 | None:intergenic | 40.0% |
| ! | ACCCAACATTAGGTTGTGTT+GGG | + | chr7.1:4394981-4395000 | None:intergenic | 40.0% |
| ! | CATTTGGAGTCTCACATCAA+AGG | + | chr7.1:4399217-4399236 | None:intergenic | 40.0% |
| ! | GGCTCTTGGAACATTTTTGT+TGG | - | chr7.1:4398781-4398800 | MS.gene050839:intron | 40.0% |
| ! | GGTTGCTCTTGCTATAATTC+AGG | - | chr7.1:4396455-4396474 | MS.gene050839:intron | 40.0% |
| ! | TCTCTGAAGGCTTTGCTTTA+TGG | - | chr7.1:4396303-4396322 | MS.gene050839:intron | 40.0% |
| ! | TCTGAAACTGGAACAAAACC+AGG | + | chr7.1:4396060-4396079 | None:intergenic | 40.0% |
| ! | TTACAGTCACAAGTTTCTGG+TGG | - | chr7.1:4395324-4395343 | MS.gene050839:intron | 40.0% |
| !! | AAAGCAACAATTTGTTGCCG+TGG | + | chr7.1:4398463-4398482 | None:intergenic | 40.0% |
| !! | AATCCTCTTGCAAAAGCATC+AGG | - | chr7.1:4396729-4396748 | MS.gene050839:intron | 40.0% |
| !! | AATGTACCCAGTTTGGGTTT+TGG | - | chr7.1:4395775-4395794 | MS.gene050839:intron | 40.0% |
| !! | AGGAAAAAGTGCTTCTGCTT+TGG | - | chr7.1:4398935-4398954 | MS.gene050839:intron | 40.0% |
| !! | ATGTACCCAGTTTGGGTTTT+GGG | - | chr7.1:4395776-4395795 | MS.gene050839:intron | 40.0% |
| !! | CGGCAACAAATTGTTGCTTT+CGG | - | chr7.1:4398463-4398482 | MS.gene050839:CDS | 40.0% |
| !! | GACATTCTGGAATCTGAAAC+TGG | + | chr7.1:4396072-4396091 | None:intergenic | 40.0% |
| !! | GATGATTTTGGAGAAGCCTT+TGG | - | chr7.1:4396771-4396790 | MS.gene050839:intron | 40.0% |
| !! | GGCAACAAATTGTTGCTTTC+GGG | - | chr7.1:4398464-4398483 | MS.gene050839:CDS | 40.0% |
| !! | GGGATATCTTGAAAGTGTTC+AGG | - | chr7.1:4397124-4397143 | MS.gene050839:CDS | 40.0% |
| !! | GTGTTGTTTACCTGCTCATA+AGG | + | chr7.1:4399180-4399199 | None:intergenic | 40.0% |
| !! | GTTTGTTTTCACACTGACCA+CGG | - | chr7.1:4398443-4398462 | MS.gene050839:CDS | 40.0% |
| !! | TGAAAGTGTTCAGGATGAAG+TGG | - | chr7.1:4397133-4397152 | MS.gene050839:CDS | 40.0% |
| !!! | AAAAGCATCAGGTGGAGTTT+TGG | - | chr7.1:4396740-4396759 | MS.gene050839:intron | 40.0% |
| !!! | TTATTTTTGTGCAGGAGGCA+AGG | - | chr7.1:4399258-4399277 | MS.gene050839:CDS | 40.0% |
| AACAGCAGTATCAGACTGCA+TGG | + | chr7.1:4397516-4397535 | None:intergenic | 45.0% | |
| AACAGCCACTGAATGGTTCT+TGG | + | chr7.1:4397195-4397214 | None:intergenic | 45.0% | |
| AACTACTGGTGCAGACATTC+TGG | + | chr7.1:4396085-4396104 | None:intergenic | 45.0% | |
| AACTATAAACTACTCCGGCG+AGG | + | chr7.1:4395554-4395573 | None:intergenic | 45.0% | |
| AATGCCCCAAAACCCAAACT+GGG | + | chr7.1:4395784-4395803 | None:intergenic | 45.0% | |
| ACCTTGAATGCAAGGATACG+AGG | + | chr7.1:4399011-4399030 | None:intergenic | 45.0% | |
| ACTGCTGTTGTACTTGACCA+TGG | - | chr7.1:4397527-4397546 | MS.gene050839:CDS | 45.0% | |
| AGAATTATTGTCTGTGCCGG+TGG | - | chr7.1:4396531-4396550 | MS.gene050839:intron | 45.0% | |
| AGGCTGGGTTGTATTTCCAT+TGG | + | chr7.1:4397944-4397963 | None:intergenic | 45.0% | |
| ATACTAGTTGAAGGAGGAGG+AGG | + | chr7.1:4395057-4395076 | None:intergenic | 45.0% | |
| ATTGGTGGAGGAAATCTAGG+TGG | + | chr7.1:4395090-4395109 | None:intergenic | 45.0% | |
| CAACATGAACAATTGCTGGC+AGG | + | chr7.1:4397713-4397732 | None:intergenic | 45.0% | |
| CCCGAAACACTATCTACTGT+AGG | + | chr7.1:4397107-4397126 | None:intergenic | 45.0% | |
| CGCATCCATTCACAGAAACT+TGG | + | chr7.1:4399356-4399375 | None:intergenic | 45.0% | |
| CGGACAGGAGATGTAAATAC+AGG | + | chr7.1:4395189-4395208 | None:intergenic | 45.0% | |
| CTCCCTCCAACAACAAGATT+AGG | - | chr7.1:4396180-4396199 | MS.gene050839:intron | 45.0% | |
| GATCCATTTGAGTAACGTGG+TGG | + | chr7.1:4395297-4395316 | None:intergenic | 45.0% | |
| GATGGGATGAACCCAACATT+AGG | + | chr7.1:4394991-4395010 | None:intergenic | 45.0% | |
| GATGTAAATACAGGAGGTCC+AGG | + | chr7.1:4395180-4395199 | None:intergenic | 45.0% | |
| GCATATCAACAGCCACTGAA+TGG | + | chr7.1:4397202-4397221 | None:intergenic | 45.0% | |
| GCCTTCAGAGAATCTTCACT+TGG | + | chr7.1:4396294-4396313 | None:intergenic | 45.0% | |
| GCTCTCTCTATGGAAACCAA+AGG | - | chr7.1:4396987-4397006 | MS.gene050839:CDS | 45.0% | |
| GGGTGAAGTTCGAAAAGGAA+TGG | + | chr7.1:4395220-4395239 | None:intergenic | 45.0% | |
| GGTAAGAGAGAAAGCTCCTT+TGG | + | chr7.1:4397305-4397324 | None:intergenic | 45.0% | |
| TAAATACAGGAGGTCCAGGA+GGG | + | chr7.1:4395176-4395195 | None:intergenic | 45.0% | |
| TACCAGAAGCTTCCAGAGAT+CGG | - | chr7.1:4396412-4396431 | MS.gene050839:intron | 45.0% | |
| TCCTCGTATCCTTGCATTCA+AGG | - | chr7.1:4399007-4399026 | MS.gene050839:CDS | 45.0% | |
| TCCTCGTTGTCTAATGCACA+GGG | - | chr7.1:4397451-4397470 | MS.gene050839:CDS | 45.0% | |
| TGCAATGGCACTGCAGTATT+TGG | + | chr7.1:4398660-4398679 | None:intergenic | 45.0% | |
| TGCATGGCAAGATCATAAGC+CGG | + | chr7.1:4397500-4397519 | None:intergenic | 45.0% | |
| TGTTATCACAAGAACCTCGC+CGG | - | chr7.1:4395537-4395556 | MS.gene050839:intron | 45.0% | |
| TTCAGTGGCTGTTGATATGC+GGG | - | chr7.1:4397202-4397221 | MS.gene050839:CDS | 45.0% | |
| ! | AAACTGTTTGGGAGAGCACA+TGG | - | chr7.1:4395510-4395529 | MS.gene050839:intron | 45.0% |
| ! | CTCTGAAGATGCTGTAAGTG+AGG | + | chr7.1:4396135-4396154 | None:intergenic | 45.0% |
| ! | GCGCAGTTCTAACAATCCAT+GGG | + | chr7.1:4396835-4396854 | None:intergenic | 45.0% |
| ! | TCCTTTTCCATCTCAGGAGA+GGG | - | chr7.1:4397330-4397349 | MS.gene050839:CDS | 45.0% |
| ! | TGCAGTATTGAGTGGTGCAT+AGG | - | chr7.1:4397865-4397884 | MS.gene050839:CDS | 45.0% |
| ! | TGCGCAGTTCTAACAATCCA+TGG | + | chr7.1:4396836-4396855 | None:intergenic | 45.0% |
| ! | TTCCTCAAGGGGTATGAGTT+GGG | - | chr7.1:4398251-4398270 | MS.gene050839:CDS | 45.0% |
| ! | TTTCCTCAAGGGGTATGAGT+TGG | - | chr7.1:4398250-4398269 | MS.gene050839:CDS | 45.0% |
| !! | ACAAGTTTCTGGTGGCTTAG+AGG | - | chr7.1:4395332-4395351 | MS.gene050839:intron | 45.0% |
| !! | TGTACCCAGTTTGGGTTTTG+GGG | - | chr7.1:4395777-4395796 | MS.gene050839:intron | 45.0% |
| !! | TTATACATTAAAAAAAAAAA+AGG | + | chr7.1:4395705-4395724 | None:intergenic | 5.0% |
| AAATACAGGAGGTCCAGGAG+GGG | + | chr7.1:4395175-4395194 | None:intergenic | 50.0% | |
| AATGCAAGGATACGAGGAGC+TGG | + | chr7.1:4399005-4399024 | None:intergenic | 50.0% | |
| ACAGAGCTTCGCTCTCTCTA+TGG | - | chr7.1:4396977-4396996 | MS.gene050839:CDS | 50.0% | |
| ACAGCCAGTGAAGCATGCAT+TGG | + | chr7.1:4396348-4396367 | None:intergenic | 50.0% | |
| ACGAGCCAAGAACCATTCAG+TGG | - | chr7.1:4397187-4397206 | MS.gene050839:CDS | 50.0% | |
| ACGTCTCATACCAGCTCACA+AGG | - | chr7.1:4399149-4399168 | MS.gene050839:CDS | 50.0% | |
| ACTATATGGCCGTACCGTGT+CGG | - | chr7.1:4396209-4396228 | MS.gene050839:intron | 50.0% | |
| AGGAGCTGGAAAACGGAACT+CGG | + | chr7.1:4398991-4399010 | None:intergenic | 50.0% | |
| AGGCAAGGTTCCCACAACTT+AGG | - | chr7.1:4399273-4399292 | MS.gene050839:CDS | 50.0% | |
| AGGGGTTGTCAAAAGGTCAG+GGG | - | chr7.1:4396500-4396519 | MS.gene050839:intron | 50.0% | |
| AGTTTCCCACATGGCTGCAA+TGG | + | chr7.1:4398675-4398694 | None:intergenic | 50.0% | |
| ATCTGCTGATCTGTCTCGAG+GGG | - | chr7.1:4396482-4396501 | MS.gene050839:intron | 50.0% | |
| ATCTGCTGATGTGCTTCCTG+GGG | - | chr7.1:4396260-4396279 | MS.gene050839:intron | 50.0% | |
| CAACCTCAACAGCAGTTCCT+AGG | + | chr7.1:4396440-4396459 | None:intergenic | 50.0% | |
| CAAGGATCCTCCTTATGAGC+AGG | - | chr7.1:4399167-4399186 | MS.gene050839:CDS | 50.0% | |
| CAATGCCCCAAAACCCAAAC+TGG | + | chr7.1:4395785-4395804 | None:intergenic | 50.0% | |
| CATCTGCTGATCTGTCTCGA+GGG | - | chr7.1:4396481-4396500 | MS.gene050839:intron | 50.0% | |
| CATCTGCTGATGTGCTTCCT+GGG | - | chr7.1:4396259-4396278 | MS.gene050839:intron | 50.0% | |
| CGTTGTCTAATGCACAGGGA+GGG | - | chr7.1:4397455-4397474 | MS.gene050839:CDS | 50.0% | |
| CTCCTCGTTGTCTAATGCAC+AGG | - | chr7.1:4397450-4397469 | MS.gene050839:CDS | 50.0% | |
| CTCGAGACAGATCAGCAGAT+GGG | + | chr7.1:4396482-4396501 | None:intergenic | 50.0% | |
| CTGAGATGGAAAAGGAGCTC+CGG | + | chr7.1:4397326-4397345 | None:intergenic | 50.0% | |
| GAAAAGGAATGGCAGCTGGA+CGG | + | chr7.1:4395209-4395228 | None:intergenic | 50.0% | |
| GAAGCGGGTGAAGTTCGAAA+AGG | + | chr7.1:4395225-4395244 | None:intergenic | 50.0% | |
| GAGGGGTTGTCAAAAGGTCA+GGG | - | chr7.1:4396499-4396518 | MS.gene050839:intron | 50.0% | |
| GATCCAGGCCCATAAGTGTT+CGG | + | chr7.1:4396558-4396577 | None:intergenic | 50.0% | |
| GATGGAGAATTTAGGTCGCG+AGG | - | chr7.1:4396638-4396657 | MS.gene050839:intron | 50.0% | |
| GCCTGGTGACAAAAAAGGCT+GGG | + | chr7.1:4397959-4397978 | None:intergenic | 50.0% | |
| GCTGAACTTGTAGCCGATGA+AGG | - | chr7.1:4398915-4398934 | MS.gene050839:intron | 50.0% | |
| GGAGGGGGATGAATTGGAAT+TGG | + | chr7.1:4395036-4395055 | None:intergenic | 50.0% | |
| GGATACGAGGAGCTGGAAAA+CGG | + | chr7.1:4398998-4399017 | None:intergenic | 50.0% | |
| GTAAATACAGGAGGTCCAGG+AGG | + | chr7.1:4395177-4395196 | None:intergenic | 50.0% | |
| GTACCAGGCTGATGTCTCAA+GGG | - | chr7.1:4397064-4397083 | MS.gene050839:CDS | 50.0% | |
| GTCACCAATGCATGCTTCAC+TGG | - | chr7.1:4396341-4396360 | MS.gene050839:intron | 50.0% | |
| GTTCGAAAAGGAATGGCAGC+TGG | + | chr7.1:4395213-4395232 | None:intergenic | 50.0% | |
| GTTGTCTAATGCACAGGGAG+GGG | - | chr7.1:4397456-4397475 | MS.gene050839:CDS | 50.0% | |
| TAAGGAGGATCCTTGTGAGC+TGG | + | chr7.1:4399162-4399181 | None:intergenic | 50.0% | |
| TAGTTGAAGGAGGAGGAGGA+GGG | + | chr7.1:4395053-4395072 | None:intergenic | 50.0% | |
| TATTGCTTGGATCAGGCCAG+TGG | - | chr7.1:4395905-4395924 | MS.gene050839:intron | 50.0% | |
| TCCCTGTGCATTAGACAACG+AGG | + | chr7.1:4397455-4397474 | None:intergenic | 50.0% | |
| TCGCCACCACGTTACTCAAA+TGG | - | chr7.1:4395291-4395310 | MS.gene050839:intron | 50.0% | |
| TCGTTGTCTAATGCACAGGG+AGG | - | chr7.1:4397454-4397473 | MS.gene050839:CDS | 50.0% | |
| TCTACATGAGACTCTTCCCC+TGG | + | chr7.1:4396894-4396913 | None:intergenic | 50.0% | |
| TGGAACAAAACCAGGTCGCT+TGG | + | chr7.1:4396052-4396071 | None:intergenic | 50.0% | |
| TGTACCAGGCTGATGTCTCA+AGG | - | chr7.1:4397063-4397082 | MS.gene050839:CDS | 50.0% | |
| TGTCTCGAGGGGTTGTCAAA+AGG | - | chr7.1:4396493-4396512 | MS.gene050839:intron | 50.0% | |
| TGTGAGCTGGTATGAGACGT+GGG | + | chr7.1:4399149-4399168 | None:intergenic | 50.0% | |
| TTGTCTAATGCACAGGGAGG+GGG | - | chr7.1:4397457-4397476 | MS.gene050839:CDS | 50.0% | |
| TTGTGAGCTGGTATGAGACG+TGG | + | chr7.1:4399150-4399169 | None:intergenic | 50.0% | |
| ! | ATCACTCAAGTTGTGGGTCC+AGG | - | chr7.1:4396873-4396892 | MS.gene050839:CDS | 50.0% |
| ! | CCACCTGATGCTTTTGCAAG+AGG | + | chr7.1:4396735-4396754 | None:intergenic | 50.0% |
| ! | CTCCTTTTCCATCTCAGGAG+AGG | - | chr7.1:4397329-4397348 | MS.gene050839:CDS | 50.0% |
| ! | TCACTCAAGTTGTGGGTCCA+GGG | - | chr7.1:4396874-4396893 | MS.gene050839:CDS | 50.0% |
| ! | TGCTGGCCTGGTGACAAAAA+AGG | + | chr7.1:4397964-4397983 | None:intergenic | 50.0% |
| !! | CCTCTTGCAAAAGCATCAGG+TGG | - | chr7.1:4396732-4396751 | MS.gene050839:intron | 50.0% |
| !! | GGGAACTTTTGAGGAGCTAC+CGG | - | chr7.1:4397478-4397497 | MS.gene050839:CDS | 50.0% |
| !!! | ACCCAGCCTTTTTTGTCACC+AGG | - | chr7.1:4397955-4397974 | MS.gene050839:CDS | 50.0% |
| !!! | CAGTTTGGGTTTTGGGGCAT+TGG | - | chr7.1:4395783-4395802 | MS.gene050839:intron | 50.0% |
| AAAACAGGAGGGTAGCTCGC+AGG | - | chr7.1:4399110-4399129 | MS.gene050839:CDS | 55.0% | |
| AAGATGAGAGGTCCGTGCTG+AGG | - | chr7.1:4397381-4397400 | MS.gene050839:CDS | 55.0% | |
| AGCTGCAGTTGCTGCTGGAA+CGG | + | chr7.1:4397991-4398010 | None:intergenic | 55.0% | |
| AGTCGTACACCGACACGGTA+CGG | + | chr7.1:4396221-4396240 | None:intergenic | 55.0% | |
| AGTTGAAGGAGGAGGAGGAG+GGG | + | chr7.1:4395052-4395071 | None:intergenic | 55.0% | |
| ATAGTGGCCCTCTCCTGAGA+TGG | + | chr7.1:4397340-4397359 | None:intergenic | 55.0% | |
| CCATCGCTGTCAAAGCTGTG+GGG | - | chr7.1:4395858-4395877 | MS.gene050839:intron | 55.0% | |
| CCATCTGCTGATCTGTCTCG+AGG | - | chr7.1:4396480-4396499 | MS.gene050839:intron | 55.0% | |
| CCCATAAGTGTTCGGTCCAC+CGG | + | chr7.1:4396550-4396569 | None:intergenic | 55.0% | |
| CCCATCGCTGTCAAAGCTGT+GGG | - | chr7.1:4395857-4395876 | MS.gene050839:intron | 55.0% | |
| CCGGTGGACCGAACACTTAT+GGG | - | chr7.1:4396547-4396566 | MS.gene050839:intron | 55.0% | |
| CCTCGAGACAGATCAGCAGA+TGG | + | chr7.1:4396483-4396502 | None:intergenic | 55.0% | |
| CGACGAGGTTGGCAAAGAAG+AGG | + | chr7.1:4395274-4395293 | None:intergenic | 55.0% | |
| CGAGGGGTTGTCAAAAGGTC+AGG | - | chr7.1:4396498-4396517 | MS.gene050839:intron | 55.0% | |
| CTAGTTGAAGGAGGAGGAGG+AGG | + | chr7.1:4395054-4395073 | None:intergenic | 55.0% | |
| CTCAGGAGAGGGCCACTATT+GGG | - | chr7.1:4397341-4397360 | MS.gene050839:CDS | 55.0% | |
| GACCCAACTCATACCCCTTG+AGG | + | chr7.1:4398256-4398275 | None:intergenic | 55.0% | |
| GATCGCGCTGTATTACCTGG+GGG | + | chr7.1:4395837-4395856 | None:intergenic | 55.0% | |
| GCACGGACCTCTCATCTTCA+TGG | + | chr7.1:4397379-4397398 | None:intergenic | 55.0% | |
| GCATCTGCTGATGTGCTTCC+TGG | - | chr7.1:4396258-4396277 | MS.gene050839:intron | 55.0% | |
| GCCCTCTCCTGAGATGGAAA+AGG | + | chr7.1:4397334-4397353 | None:intergenic | 55.0% | |
| GGATCGCGCTGTATTACCTG+GGG | + | chr7.1:4395838-4395857 | None:intergenic | 55.0% | |
| GGCCTGGTGACAAAAAAGGC+TGG | + | chr7.1:4397960-4397979 | None:intergenic | 55.0% | |
| GGGATCGCGCTGTATTACCT+GGG | + | chr7.1:4395839-4395858 | None:intergenic | 55.0% | |
| GGGGTTGTCAAAAGGTCAGG+GGG | - | chr7.1:4396501-4396520 | MS.gene050839:intron | 55.0% | |
| GGTGGAGGAAATCTAGGTGG+TGG | + | chr7.1:4395087-4395106 | None:intergenic | 55.0% | |
| GGTTGGCAAAGAAGAGGCTG+AGG | + | chr7.1:4395268-4395287 | None:intergenic | 55.0% | |
| GTACCACCTCAACCGAGTTG+AGG | - | chr7.1:4399389-4399408 | MS.gene050839:CDS | 55.0% | |
| GTGAGGAACTGGACTGCCAT+TGG | + | chr7.1:4395145-4395164 | None:intergenic | 55.0% | |
| GTGCCTAGGAACTGCTGTTG+AGG | - | chr7.1:4396434-4396453 | MS.gene050839:intron | 55.0% | |
| TCAGCTTGTGTGGTGGCTCT+TGG | - | chr7.1:4398767-4398786 | MS.gene050839:intron | 55.0% | |
| TCTCAGGAGAGGGCCACTAT+TGG | - | chr7.1:4397340-4397359 | MS.gene050839:CDS | 55.0% | |
| TGTCTAATGCACAGGGAGGG+GGG | - | chr7.1:4397458-4397477 | MS.gene050839:CDS | 55.0% | |
| ! | ATTGGTCTCTCCTGGTAGGG+AGG | - | chr7.1:4395801-4395820 | MS.gene050839:intron | 55.0% |
| ! | CACCGATCTCTGGAAGCTTC+TGG | + | chr7.1:4396417-4396436 | None:intergenic | 55.0% |
| ! | CACTCAAGTTGTGGGTCCAG+GGG | - | chr7.1:4396875-4396894 | MS.gene050839:CDS | 55.0% |
| ! | CAGTGCCATTGCAGCCATGT+GGG | - | chr7.1:4398667-4398686 | MS.gene050839:intron | 55.0% |
| ! | CCACAGCTTTGACAGCGATG+GGG | + | chr7.1:4395859-4395878 | None:intergenic | 55.0% |
| ! | CCCACAGCTTTGACAGCGAT+GGG | + | chr7.1:4395860-4395879 | None:intergenic | 55.0% |
| ! | CGGAGCTCCTTTTCCATCTC+AGG | - | chr7.1:4397324-4397343 | MS.gene050839:CDS | 55.0% |
| ! | GGGGTACTCAAGTGAGGAAC+TGG | + | chr7.1:4395156-4395175 | None:intergenic | 55.0% |
| ! | TCACTTGGTGACTTGTCCCC+AGG | + | chr7.1:4396279-4396298 | None:intergenic | 55.0% |
| !! | AGTTCCTAGGCACCGATCTC+TGG | + | chr7.1:4396427-4396446 | None:intergenic | 55.0% |
| !! | GGCATTGGTCTCTCCTGGTA+GGG | - | chr7.1:4395798-4395817 | MS.gene050839:intron | 55.0% |
| !! | TTTGGGGCATTGGTCTCTCC+TGG | - | chr7.1:4395793-4395812 | MS.gene050839:intron | 55.0% |
| CAAACTGGGACCAAGCGACC+TGG | - | chr7.1:4396039-4396058 | MS.gene050839:intron | 60.0% | |
| CAACTGCAGCTGGTGGCAGA+TGG | - | chr7.1:4398000-4398019 | MS.gene050839:CDS | 60.0% | |
| CCAGTTGAGACCTCCCTACC+AGG | + | chr7.1:4395814-4395833 | None:intergenic | 60.0% | |
| CCCCATCGCTGTCAAAGCTG+TGG | - | chr7.1:4395856-4395875 | MS.gene050839:intron | 60.0% | |
| CCTCACTTGAGTACCCCTCC+TGG | - | chr7.1:4395159-4395178 | MS.gene050839:intron | 60.0% | |
| CCTGGTAGGGAGGTCTCAAC+TGG | - | chr7.1:4395811-4395830 | MS.gene050839:intron | 60.0% | |
| CGACCCTTGAGACATCAGCC+TGG | + | chr7.1:4397070-4397089 | None:intergenic | 60.0% | |
| GAAGAGGCTGAGGAACGAGC+CGG | + | chr7.1:4395258-4395277 | None:intergenic | 60.0% | |
| GCCGGTGGACCGAACACTTA+TGG | - | chr7.1:4396546-4396565 | MS.gene050839:intron | 60.0% | |
| GGACCGAACACTTATGGGCC+TGG | - | chr7.1:4396552-4396571 | MS.gene050839:intron | 60.0% | |
| GGAGGAGGAGGGGGATGAAT+TGG | + | chr7.1:4395042-4395061 | None:intergenic | 60.0% | |
| GGGGATCGCGCTGTATTACC+TGG | + | chr7.1:4395840-4395859 | None:intergenic | 60.0% | |
| GTTCCAGCAGCAACTGCAGC+TGG | - | chr7.1:4397990-4398009 | MS.gene050839:CDS | 60.0% | |
| GTTGAAGGAGGAGGAGGAGG+GGG | + | chr7.1:4395051-4395070 | None:intergenic | 60.0% | |
| TCCATGGGAGCCTGCTGATC+TGG | + | chr7.1:4396820-4396839 | None:intergenic | 60.0% | |
| ! | CAGGGAGGGGGGAACTTTTG+AGG | - | chr7.1:4397469-4397488 | MS.gene050839:CDS | 60.0% |
| ! | CCCCACAGCTTTGACAGCGA+TGG | + | chr7.1:4395861-4395880 | None:intergenic | 60.0% |
| ! | GCAGTGCCATTGCAGCCATG+TGG | - | chr7.1:4398666-4398685 | MS.gene050839:intron | 60.0% |
| ! | GCTTCCAGAGATCGGTGCCT+AGG | - | chr7.1:4396420-4396439 | MS.gene050839:intron | 60.0% |
| ! | TAACGTGGTGGCGACGAGGT+TGG | + | chr7.1:4395285-4395304 | None:intergenic | 60.0% |
| ! | TGAGTAACGTGGTGGCGACG+AGG | + | chr7.1:4395289-4395308 | None:intergenic | 60.0% |
| !! | CCAGGAGGGGTACTCAAGTG+AGG | + | chr7.1:4395162-4395181 | None:intergenic | 60.0% |
| !! | GGGCATTGGTCTCTCCTGGT+AGG | - | chr7.1:4395797-4395816 | MS.gene050839:intron | 60.0% |
| CCACCAGCTGCAGTTGCTGC+TGG | + | chr7.1:4397996-4398015 | None:intergenic | 65.0% | |
| CCAGCAGCAACTGCAGCTGG+TGG | - | chr7.1:4397993-4398012 | MS.gene050839:CDS | 65.0% | |
| GCCAGATCAGCAGGCTCCCA+TGG | - | chr7.1:4396816-4396835 | MS.gene050839:CDS | 65.0% | |
| GGAATGGCAGCTGGACGGAC+AGG | + | chr7.1:4395204-4395223 | None:intergenic | 65.0% | |
| ! | AGGGCGTCTGCCAGATCAGC+AGG | - | chr7.1:4396807-4396826 | MS.gene050839:CDS | 65.0% |
| GAGGCTGAGGAACGAGCCGG+CGG | + | chr7.1:4395255-4395274 | None:intergenic | 70.0% | |
| GCTGCTGGAACGGCAGCTGC+TGG | + | chr7.1:4397981-4398000 | None:intergenic | 70.0% | |
| GGAGGTCTCAACTGGCCCCC+AGG | - | chr7.1:4395819-4395838 | MS.gene050839:intron | 70.0% | |
| TGGAACGGCAGCTGCTGGCC+TGG | + | chr7.1:4397976-4397995 | None:intergenic | 70.0% | |
| ACCCGCTTCGCCTCAGCCGC+CGG | - | chr7.1:4395236-4395255 | MS.gene050839:CDS | 75.0% | |
| AGCCGGCGGCTGAGGCGAAG+CGG | + | chr7.1:4395241-4395260 | None:intergenic | 75.0% | |
| GAGGAACGAGCCGGCGGCTG+AGG | + | chr7.1:4395249-4395268 | None:intergenic | 75.0% | |
| ! | GCCGGCGGCTGAGGCGAAGC+GGG | + | chr7.1:4395240-4395259 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 4394967 | 4399409 | 4394967 | ID=MS.gene050839 |
| chr7.1 | mRNA | 4394967 | 4399409 | 4394967 | ID=MS.gene050839.t1;Parent=MS.gene050839 |
| chr7.1 | exon | 4398972 | 4399409 | 4398972 | ID=MS.gene050839.t1.exon1;Parent=MS.gene050839.t1 |
| chr7.1 | CDS | 4398972 | 4399409 | 4398972 | ID=cds.MS.gene050839.t1;Parent=MS.gene050839.t1 |
| chr7.1 | exon | 4396805 | 4398625 | 4396805 | ID=MS.gene050839.t1.exon2;Parent=MS.gene050839.t1 |
| chr7.1 | CDS | 4396805 | 4398625 | 4396805 | ID=cds.MS.gene050839.t1;Parent=MS.gene050839.t1 |
| chr7.1 | exon | 4395348 | 4395464 | 4395348 | ID=MS.gene050839.t1.exon3;Parent=MS.gene050839.t1 |
| chr7.1 | CDS | 4395348 | 4395464 | 4395348 | ID=cds.MS.gene050839.t1;Parent=MS.gene050839.t1 |
| chr7.1 | exon | 4395188 | 4395259 | 4395188 | ID=MS.gene050839.t1.exon4;Parent=MS.gene050839.t1 |
| chr7.1 | CDS | 4395188 | 4395259 | 4395188 | ID=cds.MS.gene050839.t1;Parent=MS.gene050839.t1 |
| chr7.1 | exon | 4394967 | 4395104 | 4394967 | ID=MS.gene050839.t1.exon5;Parent=MS.gene050839.t1 |
| chr7.1 | CDS | 4394967 | 4395104 | 4394967 | ID=cds.MS.gene050839.t1;Parent=MS.gene050839.t1 |
| Gene Sequence |
| Protein sequence |
