Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050906.t1 | XP_003626208.1 | 98.5 | 463 | 7 | 0 | 1 | 463 | 1 | 463 | 2.40E-263 | 917.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050906.t1 | Q9V6G5 | 33.3 | 237 | 154 | 3 | 100 | 335 | 144 | 377 | 4.3e-35 | 150.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050906.t1 | G7KXI7 | 98.5 | 463 | 7 | 0 | 1 | 463 | 1 | 463 | 1.7e-263 | 917.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050906 | MS.gene050907 | 0.815519 | 8.87E-52 | -1.69E-46 |
| MS.gene050906 | MS.gene050909 | 0.887679 | 1.15E-72 | -1.69E-46 |
| MS.gene050906 | MS.gene23117 | 0.99854 | 3.66E-268 | -1.69E-46 |
| MS.gene050906 | MS.gene23118 | 0.810939 | 8.98E-51 | -1.69E-46 |
| MS.gene050906 | MS.gene23120 | 0.876116 | 1.80E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050906.t1 | MTR_7g112680 | 98.488 | 463 | 7 | 0 | 1 | 463 | 1 | 463 | 0.0 | 945 |
| MS.gene050906.t1 | MTR_8g072400 | 38.119 | 202 | 116 | 4 | 98 | 293 | 22 | 220 | 8.82e-40 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050906.t1 | AT3G05510 | 59.292 | 452 | 172 | 6 | 1 | 451 | 3 | 443 | 0.0 | 551 |
| MS.gene050906.t1 | AT3G05510 | 61.281 | 359 | 132 | 3 | 94 | 451 | 1 | 353 | 1.56e-161 | 461 |
| MS.gene050906.t1 | AT1G78690 | 37.755 | 196 | 114 | 3 | 112 | 301 | 35 | 228 | 1.14e-37 | 139 |
| MS.gene050906.t1 | AT1G78690 | 37.755 | 196 | 114 | 3 | 112 | 301 | 35 | 228 | 1.14e-37 | 139 |
| MS.gene050906.t1 | AT1G78690 | 39.490 | 157 | 93 | 2 | 112 | 268 | 35 | 189 | 1.20e-32 | 123 |
| MS.gene050906.t1 | AT1G78690 | 38.889 | 144 | 81 | 2 | 164 | 301 | 11 | 153 | 8.96e-29 | 113 |
| MS.gene050906.t1 | AT1G78690 | 38.889 | 144 | 81 | 2 | 164 | 301 | 11 | 153 | 8.96e-29 | 113 |
Find 130 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGAGGACAACTGTTTC+TGG | 0.203300 | 7.1:-3330543 | None:intergenic |
| ACGTACCATCTTTCCAATTC+TGG | 0.203989 | 7.1:-3329909 | None:intergenic |
| CAGGTTGATTGGGAATTATT+TGG | 0.234580 | 7.1:+3330474 | MS.gene050906:CDS |
| GTCTTGATCGCGGTGATGTT+TGG | 0.253216 | 7.1:+3326582 | MS.gene050906:CDS |
| GCTTCCTCCACAAGTTCTTT+TGG | 0.253916 | 7.1:+3327723 | MS.gene050906:CDS |
| AGTATATCGTCAAAATTTAT+AGG | 0.303688 | 7.1:-3330273 | None:intergenic |
| ATACAGGATGCGAGGTTATA+TGG | 0.322518 | 7.1:+3330620 | MS.gene050906:CDS |
| TCCCGGGAGCGACTACCTTC+TGG | 0.329763 | 7.1:-3328566 | None:intergenic |
| TCTTCTGCAGGGAATGGATT+TGG | 0.330308 | 7.1:+3328502 | MS.gene050906:intron |
| CGAAAGAATGCAGAAGTTAC+AGG | 0.330333 | 7.1:-3327799 | None:intergenic |
| AAAACTACACACTGCATTGC+TGG | 0.349419 | 7.1:+3327517 | MS.gene050906:CDS |
| GAGAAGTAACCGTCGGCATC+TGG | 0.349703 | 7.1:-3326701 | None:intergenic |
| CCCATCAGGTTTGTCTTGGA+TGG | 0.354768 | 7.1:+3329812 | MS.gene050906:intron |
| TGCATCCCTGTATGTACAAA+TGG | 0.365929 | 7.1:-3329857 | None:intergenic |
| GTTATCCCATTTGTACATAC+AGG | 0.370246 | 7.1:+3329851 | MS.gene050906:CDS |
| ACGGGGTGATGGAATTTATC+AGG | 0.385854 | 7.1:+3327846 | MS.gene050906:CDS |
| GGTGCCAGCATTCCCAGAAT+TGG | 0.386882 | 7.1:+3329896 | MS.gene050906:CDS |
| CTGGGGAAATTGTACGGTTA+TGG | 0.389099 | 7.1:-3326682 | None:intergenic |
| TCGATCTGTTAAAGTATTGC+CGG | 0.392215 | 7.1:+3327819 | MS.gene050906:CDS |
| GAATCTTGCAGCAGGTTGAT+TGG | 0.392867 | 7.1:+3330463 | MS.gene050906:CDS |
| GAACGGATTAAACCGTGTTC+AGG | 0.401428 | 7.1:+3327017 | MS.gene050906:CDS |
| CTGGGAATGCTGGCACCTAT+TGG | 0.408913 | 7.1:-3329890 | None:intergenic |
| CCCGGGAGCGACTACCTTCT+GGG | 0.409079 | 7.1:-3328565 | None:intergenic |
| CACAGCTCTGAACGAGTGTC+TGG | 0.409227 | 7.1:+3330441 | MS.gene050906:CDS |
| GTAAGAAGAGGCTTGCCTTT+GGG | 0.410855 | 7.1:-3327545 | None:intergenic |
| TAGAGAGATCTGCCCTTTGA+AGG | 0.411515 | 7.1:+3330722 | MS.gene050906:CDS |
| TAAATTGAACAATGGTGGTT+GGG | 0.417761 | 7.1:+3328532 | MS.gene050906:CDS |
| GCTGTTGCTATTCCTATACT+TGG | 0.423317 | 7.1:+3326973 | MS.gene050906:CDS |
| CTTTCCAATTCTGGGAATGC+TGG | 0.429469 | 7.1:-3329900 | None:intergenic |
| CGTACCATCTTTCCAATTCT+GGG | 0.433487 | 7.1:-3329908 | None:intergenic |
| CGTAAGAAGAGGCTTGCCTT+TGG | 0.435012 | 7.1:-3327546 | None:intergenic |
| TCCCAGAAGGTAGTCGCTCC+CGG | 0.442066 | 7.1:+3328564 | MS.gene050906:CDS |
| TTTCCCCATCAGGTTTGTCT+TGG | 0.443020 | 7.1:+3329808 | MS.gene050906:intron |
| AATCTTGCAGCAGGTTGATT+GGG | 0.446569 | 7.1:+3330464 | MS.gene050906:CDS |
| CCATTGCTAAAGTGTCGACT+TGG | 0.447193 | 7.1:-3330386 | None:intergenic |
| CAGCAACCATGTTGCTTCCA+TGG | 0.453167 | 7.1:+3327675 | MS.gene050906:CDS |
| AACTGTTTCCATGCCTTCAA+AGG | 0.456982 | 7.1:-3330735 | None:intergenic |
| AATGAAACTAAGGACTCTTC+TGG | 0.457637 | 7.1:+3330693 | MS.gene050906:CDS |
| GATGCAGTAGCGGCAAGAAT+TGG | 0.463483 | 7.1:+3330339 | MS.gene050906:CDS |
| CTAAATTGAACAATGGTGGT+TGG | 0.464481 | 7.1:+3328531 | MS.gene050906:CDS |
| GATCCCTTCAATTACAGCTC+AGG | 0.469130 | 7.1:+3326618 | MS.gene050906:CDS |
| TAAAGTATTGCCGGTCGCAC+GGG | 0.474812 | 7.1:+3327828 | MS.gene050906:CDS |
| CAAAGGCAAGCCTCTTCTTA+CGG | 0.475091 | 7.1:+3327547 | MS.gene050906:CDS |
| CTTGCAAGAGAGGTGTTGCC+AGG | 0.475101 | 7.1:+3328609 | MS.gene050906:CDS |
| TTGCCGGTCGCACGGGGTGA+TGG | 0.476846 | 7.1:+3327835 | MS.gene050906:CDS |
| TGTACAAATGGGATAACAAC+GGG | 0.478957 | 7.1:-3329845 | None:intergenic |
| TATGAATAACAATGAAACTA+AGG | 0.480420 | 7.1:+3330683 | MS.gene050906:CDS |
| ACCTCTCTTGCAAGAGCCCA+TGG | 0.482221 | 7.1:-3328600 | None:intergenic |
| AGAGAGTGGGTTTCTCATAC+AGG | 0.491177 | 7.1:+3330604 | MS.gene050906:CDS |
| TTAAAGTATTGCCGGTCGCA+CGG | 0.493905 | 7.1:+3327827 | MS.gene050906:CDS |
| ATTCCATCACCCCGTGCGAC+CGG | 0.493911 | 7.1:-3327838 | None:intergenic |
| GTTATTCATAAATAAGCCTC+TGG | 0.498292 | 7.1:-3330670 | None:intergenic |
| AATCATCATCAGCAGAAGAT+AGG | 0.502376 | 7.1:-3330509 | None:intergenic |
| GATCCCTGAGCTGTAATTGA+AGG | 0.502891 | 7.1:-3326622 | None:intergenic |
| AAATTGTACGGTTATGGCGG+CGG | 0.503231 | 7.1:-3326676 | None:intergenic |
| GCACGGGAGTAACAGGTGTA+TGG | 0.505787 | 7.1:+3327488 | MS.gene050906:intron |
| ACTGTTTCCATGCCTTCAAA+GGG | 0.510098 | 7.1:-3330734 | None:intergenic |
| ATGCAGGAGATTATGCCAAT+AGG | 0.510588 | 7.1:+3329875 | MS.gene050906:CDS |
| AGAAGTAACCGTCGGCATCT+GGG | 0.511118 | 7.1:-3326700 | None:intergenic |
| TGACATACATTTCCAAGTAT+AGG | 0.514374 | 7.1:-3326985 | None:intergenic |
| GCATCCCTGTATGTACAAAT+GGG | 0.515593 | 7.1:-3329856 | None:intergenic |
| TCTCCTCCACTCTTCAGCGT+TGG | 0.522445 | 7.1:+3326720 | MS.gene050906:CDS |
| TATGGCGGCGGCGCCAATGT+CGG | 0.523549 | 7.1:-3326664 | None:intergenic |
| CTTTCTAAATTGAACAATGG+TGG | 0.525637 | 7.1:+3328527 | MS.gene050906:CDS |
| AGATCTGCCCTTTGAAGGCA+TGG | 0.526357 | 7.1:+3330727 | MS.gene050906:CDS |
| ATTTGTACATACAGGGATGC+AGG | 0.527428 | 7.1:+3329859 | MS.gene050906:CDS |
| GGAGTAACAGGTGTATGGAT+TGG | 0.528776 | 7.1:+3327493 | MS.gene050906:intron |
| ACCATGGGCTCTTGCAAGAG+AGG | 0.538162 | 7.1:+3328599 | MS.gene050906:CDS |
| CATTCCCAGAATTGGAAAGA+TGG | 0.539202 | 7.1:+3329904 | MS.gene050906:CDS |
| CCCAGAAGGTAGTCGCTCCC+GGG | 0.542231 | 7.1:+3328565 | MS.gene050906:CDS |
| CGATAGAAAGAGGTGGAAGA+AGG | 0.547058 | 7.1:-3326779 | None:intergenic |
| CTAGCATCCAAAAGAACTTG+TGG | 0.547645 | 7.1:-3327730 | None:intergenic |
| GGTAGTCGCTCCCGGGATGG+TGG | 0.548779 | 7.1:+3328572 | MS.gene050906:CDS |
| GCGGCGCCAATGTCGGTCGA+CGG | 0.548990 | 7.1:-3326657 | None:intergenic |
| ATCCCTTCAATTACAGCTCA+GGG | 0.550255 | 7.1:+3326619 | MS.gene050906:CDS |
| ACCTCGTTTGCGATAGAAAG+AGG | 0.553205 | 7.1:-3326789 | None:intergenic |
| GTTTAGGTTACTGTAATCGT+AGG | 0.554239 | 7.1:+3330246 | MS.gene050906:intron |
| GCGAGGTTATATGGATCAGA+TGG | 0.554447 | 7.1:+3330629 | MS.gene050906:CDS |
| GATATACTAAACATGGAGAA+AGG | 0.555534 | 7.1:+3330288 | MS.gene050906:CDS |
| GAAGGTAGTCGCTCCCGGGA+TGG | 0.557086 | 7.1:+3328569 | MS.gene050906:CDS |
| CATTGCTAAAGTGTCGACTT+GGG | 0.560694 | 7.1:-3330385 | None:intergenic |
| AGTGTCTGGAATCTTGCAGC+AGG | 0.563991 | 7.1:+3330455 | MS.gene050906:CDS |
| GGGAAATTGTACGGTTATGG+CGG | 0.564480 | 7.1:-3326679 | None:intergenic |
| CGGCATCTGGGGAAATTGTA+CGG | 0.568090 | 7.1:-3326688 | None:intergenic |
| AACTGTTTCTGGTGTCTGCG+TGG | 0.571467 | 7.1:-3330532 | None:intergenic |
| GCTCTTTCTAAATTGAACAA+TGG | 0.575580 | 7.1:+3328524 | MS.gene050906:CDS |
| GACTACCTTCTGGGAATATG+TGG | 0.575613 | 7.1:-3328556 | None:intergenic |
| ACAATTTCCCCAGATGCCGA+CGG | 0.576778 | 7.1:+3326692 | MS.gene050906:CDS |
| GAGTCGCCGTCGACCGACAT+TGG | 0.577287 | 7.1:+3326651 | MS.gene050906:CDS |
| CAGAAACACTGGTATTTGAG+AGG | 0.579629 | 7.1:-3330557 | None:intergenic |
| ACTAAACATGGAGAAAGGCC+CGG | 0.584770 | 7.1:+3330293 | MS.gene050906:CDS |
| TTATCCCATTTGTACATACA+GGG | 0.588424 | 7.1:+3329852 | MS.gene050906:CDS |
| AATGACAAGTGGGTCATCCA+TGG | 0.589008 | 7.1:-3327692 | None:intergenic |
| ATCCCTGAGCTGTAATTGAA+GGG | 0.591567 | 7.1:-3326621 | None:intergenic |
| CCGCGATCAAGACGGTGCAT+CGG | 0.591939 | 7.1:-3326572 | None:intergenic |
| CTAATGTCATTTGCTGCCAG+AGG | 0.593642 | 7.1:+3330654 | MS.gene050906:CDS |
| GAAGTAACCGTCGGCATCTG+GGG | 0.595510 | 7.1:-3326699 | None:intergenic |
| GTTAAGCCAACGCTGAAGAG+TGG | 0.597044 | 7.1:-3326726 | None:intergenic |
| GAAAGAATGCAGAAGTTACA+GGG | 0.599670 | 7.1:-3327798 | None:intergenic |
| TTGCACAAAGTGTCCATCTG+AGG | 0.602593 | 7.1:-3327756 | None:intergenic |
| ATATCACATACCGTAAGAAG+AGG | 0.605984 | 7.1:-3327557 | None:intergenic |
| AGCAGCGAAGCAATGACAAG+TGG | 0.615823 | 7.1:-3327703 | None:intergenic |
| CTGATGCTGTTCAGAAACAC+TGG | 0.616244 | 7.1:-3330568 | None:intergenic |
| ACCTCTTTCTATCGCAAACG+AGG | 0.618351 | 7.1:+3326788 | MS.gene050906:CDS |
| TGATCGGTTGCATGAACTGA+AGG | 0.621501 | 7.1:+3330362 | MS.gene050906:CDS |
| TGGATGCTAGAAACCTCAGA+TGG | 0.623292 | 7.1:+3327743 | MS.gene050906:CDS |
| GCAATCGCATAGTAAGAGAG+TGG | 0.624576 | 7.1:+3330590 | MS.gene050906:CDS |
| ATGTGTATATACAGTGATGA+GGG | 0.630157 | 7.1:+3326906 | MS.gene050906:intron |
| CCAAGTCGACACTTTAGCAA+TGG | 0.630183 | 7.1:+3330386 | MS.gene050906:CDS |
| TAGCGGCAAGAATTGGTGAT+CGG | 0.631287 | 7.1:+3330346 | MS.gene050906:CDS |
| CAATCGCATAGTAAGAGAGT+GGG | 0.631469 | 7.1:+3330591 | MS.gene050906:CDS |
| AAGCCAACGCTGAAGAGTGG+AGG | 0.637700 | 7.1:-3326723 | None:intergenic |
| GGTCATCCATGGAAGCAACA+TGG | 0.641619 | 7.1:-3327681 | None:intergenic |
| GCAGCGAAGCAATGACAAGT+GGG | 0.645316 | 7.1:-3327702 | None:intergenic |
| GCATCCAAAAGAACTTGTGG+AGG | 0.649940 | 7.1:-3327727 | None:intergenic |
| GGTTTCTCATACAGGATGCG+AGG | 0.651162 | 7.1:+3330612 | MS.gene050906:CDS |
| ATGTACAAATGGGATAACAA+CGG | 0.651661 | 7.1:-3329846 | None:intergenic |
| TGGGTCCACATATTCCCAGA+AGG | 0.654489 | 7.1:+3328551 | MS.gene050906:CDS |
| ATCATATTCATACCTGAACA+CGG | 0.654496 | 7.1:-3327029 | None:intergenic |
| TATGTGTATATACAGTGATG+AGG | 0.656036 | 7.1:+3326905 | MS.gene050906:intron |
| CCGATGCACCGTCTTGATCG+CGG | 0.657096 | 7.1:+3326572 | None:intergenic |
| AAAGTATTGCCGGTCGCACG+GGG | 0.657435 | 7.1:+3327829 | MS.gene050906:CDS |
| AAGACTGTATGATGCAGTAG+CGG | 0.665285 | 7.1:+3330329 | MS.gene050906:CDS |
| GCATTGCTGGAAAGACCCAA+AGG | 0.674734 | 7.1:+3327530 | MS.gene050906:CDS |
| AAACATCACCGCGATCAAGA+CGG | 0.675542 | 7.1:-3326580 | None:intergenic |
| TCGTTTGCGATAGAAAGAGG+TGG | 0.675871 | 7.1:-3326786 | None:intergenic |
| AGTGGAGGAGAAGTAACCGT+CGG | 0.693229 | 7.1:-3326708 | None:intergenic |
| TAGCAATGGAACAAGAGATG+CGG | 0.696401 | 7.1:+3330400 | MS.gene050906:CDS |
| GACACTCGTTCAGAGCTGTG+TGG | 0.706301 | 7.1:-3330438 | None:intergenic |
| GGGTGATGGAATTTATCAGG+AGG | 0.706969 | 7.1:+3327849 | MS.gene050906:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATATGGTAAAAATAA+GGG | - | chr7.1:3329183-3329202 | None:intergenic | 10.0% |
| !! | TATATTTGCATTTAAATATA+TGG | - | chr7.1:3329195-3329214 | None:intergenic | 10.0% |
| !! | TTAAATATATGGTAAAAATA+AGG | - | chr7.1:3329184-3329203 | None:intergenic | 10.0% |
| !! | TTAGAAATTAATTAATCTTA+AGG | - | chr7.1:3329703-3329722 | None:intergenic | 10.0% |
| !! | ACAAAATAAAAATAAAATGC+AGG | + | chr7.1:3327340-3327359 | MS.gene050906:intron | 15.0% |
| !! | ATTCTATGTCATAAAAATTA+TGG | + | chr7.1:3329489-3329508 | MS.gene050906:intron | 15.0% |
| !! | GGATAATATTTGTTTATATT+TGG | + | chr7.1:3327903-3327922 | MS.gene050906:intron | 15.0% |
| !! | TTCTATGTCATAAAAATTAT+GGG | + | chr7.1:3329490-3329509 | MS.gene050906:intron | 15.0% |
| !!! | AAATTTAAAACATCATACAT+TGG | - | chr7.1:3329467-3329486 | None:intergenic | 15.0% |
| !!! | AATGTATGATGTTTTAAATT+TGG | + | chr7.1:3329466-3329485 | MS.gene050906:intron | 15.0% |
| !!! | GCTTTTAATTTTAAATTTTC+AGG | + | chr7.1:3327651-3327670 | MS.gene050906:intron | 15.0% |
| !!! | TATGGGTTTAATTTTTTTAA+CGG | + | chr7.1:3327619-3327638 | MS.gene050906:intron | 15.0% |
| !!! | TGAAAAATTCTAAAAGTTAT+TGG | + | chr7.1:3327110-3327129 | MS.gene050906:intron | 15.0% |
| !!! | TTATAATACTCTAAAGAATA+AGG | - | chr7.1:3328751-3328770 | None:intergenic | 15.0% |
| !! | AAATTATTTCATCAACACAT+AGG | + | chr7.1:3329950-3329969 | MS.gene050906:intron | 20.0% |
| !! | ACTTAAAAAAAATCATTTCC+AGG | - | chr7.1:3328089-3328108 | None:intergenic | 20.0% |
| !! | AGTATATCGTCAAAATTTAT+AGG | - | chr7.1:3330276-3330295 | None:intergenic | 20.0% |
| !! | ATGTCATAAATTAGTATTAG+TGG | - | chr7.1:3329669-3329688 | None:intergenic | 20.0% |
| !! | GATATAAAATAGTAGAAACA+GGG | - | chr7.1:3329756-3329775 | None:intergenic | 20.0% |
| !! | GTTGTTTAAATACAGATAAA+AGG | - | chr7.1:3328889-3328908 | None:intergenic | 20.0% |
| !! | TAATTGATTAGGTTATTCAT+AGG | + | chr7.1:3326870-3326889 | MS.gene050906:intron | 20.0% |
| !! | TATGAATAACAATGAAACTA+AGG | + | chr7.1:3330683-3330702 | MS.gene050906:CDS | 20.0% |
| !!! | ATGGGTTTAATTTTTTTAAC+GGG | + | chr7.1:3327620-3327639 | MS.gene050906:intron | 20.0% |
| !!! | ATGTGTTGATGAAATAATTT+CGG | - | chr7.1:3329950-3329969 | None:intergenic | 20.0% |
| !!! | ATTTGTTTATATTTGGTGAA+TGG | + | chr7.1:3327910-3327929 | MS.gene050906:intron | 20.0% |
| !!! | TCTTATTGTTTTTACATGTT+TGG | + | chr7.1:3330220-3330239 | MS.gene050906:intron | 20.0% |
| !!! | TTCGAATAATAAGTTTGTTT+TGG | - | chr7.1:3327938-3327957 | None:intergenic | 20.0% |
| ! | AATGTATATGAAAAGAGACA+TGG | + | chr7.1:3328408-3328427 | MS.gene050906:intron | 25.0% |
| ! | AATTTCTGTGTTTCATAACA+AGG | + | chr7.1:3328719-3328738 | MS.gene050906:intron | 25.0% |
| ! | CAAACTTATTATTCGAAATG+AGG | + | chr7.1:3327941-3327960 | MS.gene050906:intron | 25.0% |
| ! | CGATATAAAATAGTAGAAAC+AGG | - | chr7.1:3329757-3329776 | None:intergenic | 25.0% |
| ! | CTTCCAATGAAAATTTAACT+CGG | + | chr7.1:3328314-3328333 | MS.gene050906:intron | 25.0% |
| ! | GATGAAATAATTTCGGAAAT+GGG | - | chr7.1:3329943-3329962 | None:intergenic | 25.0% |
| ! | GGTAAAAATAAGGGATATAA+GGG | - | chr7.1:3329174-3329193 | None:intergenic | 25.0% |
| ! | TAACATATTTAGCTATGTTG+AGG | - | chr7.1:3328288-3328307 | None:intergenic | 25.0% |
| ! | TAGATGTTAGGTAATTGATT+AGG | + | chr7.1:3326859-3326878 | MS.gene050906:intron | 25.0% |
| ! | TCAAATATTGTGTAGATGTT+AGG | + | chr7.1:3326847-3326866 | MS.gene050906:intron | 25.0% |
| ! | TCTTAAATAACATTAGCTCA+GGG | + | chr7.1:3329301-3329320 | MS.gene050906:intron | 25.0% |
| ! | TGATGAAATAATTTCGGAAA+TGG | - | chr7.1:3329944-3329963 | None:intergenic | 25.0% |
| ! | TGGTAAAAATAAGGGATATA+AGG | - | chr7.1:3329175-3329194 | None:intergenic | 25.0% |
| ! | TTCCATTGGTAAATTCATAA+TGG | + | chr7.1:3328822-3328841 | MS.gene050906:intron | 25.0% |
| ! | TTCTTAAATAACATTAGCTC+AGG | + | chr7.1:3329300-3329319 | MS.gene050906:intron | 25.0% |
| ! | TTTACATGTTTGGATTGTTT+AGG | + | chr7.1:3330230-3330249 | MS.gene050906:intron | 25.0% |
| !! | ATGGCAAAATTTCAAAGTTT+TGG | + | chr7.1:3328841-3328860 | MS.gene050906:intron | 25.0% |
| !! | TAGTTGTTTCATATGTATGT+GGG | - | chr7.1:3329055-3329074 | None:intergenic | 25.0% |
| !! | TGGTCAAAATAATTGTTGTT+TGG | + | chr7.1:3327079-3327098 | MS.gene050906:intron | 25.0% |
| !! | TTAGTTGTTTCATATGTATG+TGG | - | chr7.1:3329056-3329075 | None:intergenic | 25.0% |
| !! | TTTCCGAGTTAAATTTTCAT+TGG | - | chr7.1:3328320-3328339 | None:intergenic | 25.0% |
| !! | TTTTGACGATATACTAAACA+TGG | + | chr7.1:3330281-3330300 | MS.gene050906:CDS | 25.0% |
| !!! | AATTTGCTCATTTTATGTCA+TGG | + | chr7.1:3328681-3328700 | MS.gene050906:intron | 25.0% |
| !!! | AGTATTGTTAGTTTTTATGC+TGG | + | chr7.1:3329080-3329099 | MS.gene050906:intron | 25.0% |
| !!! | GTATTGTTAGTTTTTATGCT+GGG | + | chr7.1:3329081-3329100 | MS.gene050906:intron | 25.0% |
| !!! | TATTGTTAGTTTTTATGCTG+GGG | + | chr7.1:3329082-3329101 | MS.gene050906:intron | 25.0% |
| !!! | TCAAAATAATTGTTGTTTGG+AGG | + | chr7.1:3327082-3327101 | MS.gene050906:intron | 25.0% |
| !!! | TGGGTTTAATTTTTTTAACG+GGG | + | chr7.1:3327621-3327640 | MS.gene050906:intron | 25.0% |
| !!! | TTTTTATTTTGTAGACGATG+TGG | - | chr7.1:3327332-3327351 | None:intergenic | 25.0% |
| AAAATAAGGGATATAAGGGT+TGG | - | chr7.1:3329170-3329189 | None:intergenic | 30.0% | |
| AAACAAAAGAACCTACTTAG+TGG | - | chr7.1:3328929-3328948 | None:intergenic | 30.0% | |
| AACAAAAGAACCTACTTAGT+GGG | - | chr7.1:3328928-3328947 | None:intergenic | 30.0% | |
| AAGGATTGAAATTGTTCCAT+TGG | + | chr7.1:3328808-3328827 | MS.gene050906:intron | 30.0% | |
| ATCATATTCATACCTGAACA+CGG | - | chr7.1:3327032-3327051 | None:intergenic | 30.0% | |
| ATCTGAATCTGAATTCAATC+AGG | - | chr7.1:3330138-3330157 | None:intergenic | 30.0% | |
| ATGTACAAATGGGATAACAA+CGG | - | chr7.1:3329849-3329868 | None:intergenic | 30.0% | |
| ATGTGTATATACAGTGATGA+GGG | + | chr7.1:3326906-3326925 | MS.gene050906:intron | 30.0% | |
| CATTGAGTTCATTGAGTTAT+TGG | - | chr7.1:3329343-3329362 | None:intergenic | 30.0% | |
| CTATATGCTTCTCTCATATT+TGG | + | chr7.1:3327059-3327078 | MS.gene050906:intron | 30.0% | |
| CTTTCTAAATTGAACAATGG+TGG | + | chr7.1:3328527-3328546 | MS.gene050906:CDS | 30.0% | |
| GATATACTAAACATGGAGAA+AGG | + | chr7.1:3330288-3330307 | MS.gene050906:CDS | 30.0% | |
| GCTCTTTCTAAATTGAACAA+TGG | + | chr7.1:3328524-3328543 | MS.gene050906:CDS | 30.0% | |
| GTATACCAGAACAAACAATT+AGG | - | chr7.1:3328867-3328886 | None:intergenic | 30.0% | |
| GTTATTCATAAATAAGCCTC+TGG | - | chr7.1:3330673-3330692 | None:intergenic | 30.0% | |
| TAAATTGAACAATGGTGGTT+GGG | + | chr7.1:3328532-3328551 | MS.gene050906:CDS | 30.0% | |
| TATGTAGACAAATTCCACTT+TGG | - | chr7.1:3328445-3328464 | None:intergenic | 30.0% | |
| TATGTGTATATACAGTGATG+AGG | + | chr7.1:3326905-3326924 | MS.gene050906:intron | 30.0% | |
| TGAAGTTATAAGAAGATCGA+GGG | - | chr7.1:3329119-3329138 | None:intergenic | 30.0% | |
| TGACATACATTTCCAAGTAT+AGG | - | chr7.1:3326988-3327007 | None:intergenic | 30.0% | |
| TGATAAATTCTGTATGGAAG+TGG | + | chr7.1:3329234-3329253 | MS.gene050906:intron | 30.0% | |
| TGCCATTATGAATTTACCAA+TGG | - | chr7.1:3328827-3328846 | None:intergenic | 30.0% | |
| TGTGCAAAAGGAATCTTTAT+GGG | + | chr7.1:3327602-3327621 | MS.gene050906:intron | 30.0% | |
| TGTTGTCAGCATATTTGATT+TGG | + | chr7.1:3329584-3329603 | MS.gene050906:intron | 30.0% | |
| TTATCCCATTTGTACATACA+GGG | + | chr7.1:3329852-3329871 | MS.gene050906:CDS | 30.0% | |
| ! | ATATGAGAGAAGCATATAGT+TGG | - | chr7.1:3327058-3327077 | None:intergenic | 30.0% |
| ! | CGAGTTAAATTTTCATTGGA+AGG | - | chr7.1:3328316-3328335 | None:intergenic | 30.0% |
| ! | GTATGTCACGTTTTTATGAA+CGG | + | chr7.1:3327000-3327019 | MS.gene050906:CDS | 30.0% |
| ! | TGCAGATCTAGACTTTAAAA+AGG | - | chr7.1:3329374-3329393 | None:intergenic | 30.0% |
| !! | TCAGCATATTTGATTTGGAT+AGG | + | chr7.1:3329589-3329608 | MS.gene050906:intron | 30.0% |
| !!! | TAATTTTGAAGTGTGAGCAA+GGG | + | chr7.1:3328369-3328388 | MS.gene050906:intron | 30.0% |
| AAAAGCCACATCATTGACAA+AGG | - | chr7.1:3327992-3328011 | None:intergenic | 35.0% | |
| AAAGCTCATAGATTGACTAG+GGG | - | chr7.1:3329995-3330014 | None:intergenic | 35.0% | |
| AATAAAATGCAGCTTCCTTG+AGG | + | chr7.1:3327216-3327235 | MS.gene050906:intron | 35.0% | |
| AATCATCATCAGCAGAAGAT+AGG | - | chr7.1:3330512-3330531 | None:intergenic | 35.0% | |
| AATGAAACTAAGGACTCTTC+TGG | + | chr7.1:3330693-3330712 | MS.gene050906:CDS | 35.0% | |
| AATTCAGATTCAGATTCTGC+TGG | + | chr7.1:3330143-3330162 | MS.gene050906:intron | 35.0% | |
| ACATCGTTTGTTCTCTTCAA+AGG | + | chr7.1:3328789-3328808 | MS.gene050906:intron | 35.0% | |
| ACTGATACGAAATAAGACAG+AGG | - | chr7.1:3328169-3328188 | None:intergenic | 35.0% | |
| AGGGGAATAGAAAAAGAAAC+AGG | - | chr7.1:3328250-3328269 | None:intergenic | 35.0% | |
| ATATCACATACCGTAAGAAG+AGG | - | chr7.1:3327560-3327579 | None:intergenic | 35.0% | |
| ATGGAATTTATCAGGAGGTA+TGG | + | chr7.1:3327854-3327873 | MS.gene050906:intron | 35.0% | |
| ATTAAAAGCGAAGAATTGCG+AGG | - | chr7.1:3328023-3328042 | None:intergenic | 35.0% | |
| ATTCAGATTCAGATTCTGCT+GGG | + | chr7.1:3330144-3330163 | MS.gene050906:intron | 35.0% | |
| CTAAATTGAACAATGGTGGT+TGG | + | chr7.1:3328531-3328550 | MS.gene050906:CDS | 35.0% | |
| CTATTCCCCTCTAATAAACA+CGG | + | chr7.1:3328260-3328279 | MS.gene050906:intron | 35.0% | |
| CTGTGCAAAAGGAATCTTTA+TGG | + | chr7.1:3327601-3327620 | MS.gene050906:intron | 35.0% | |
| CTTTCCAAGGTTCAAAATAC+GGG | + | chr7.1:3330011-3330030 | MS.gene050906:intron | 35.0% | |
| GAAAGAATGCAGAAGTTACA+GGG | - | chr7.1:3327801-3327820 | None:intergenic | 35.0% | |
| GAAAGCTCATAGATTGACTA+GGG | - | chr7.1:3329996-3330015 | None:intergenic | 35.0% | |
| GAAGATTGTTAGTTGTTACC+TGG | - | chr7.1:3328630-3328649 | None:intergenic | 35.0% | |
| GCTTTCCAAGGTTCAAAATA+CGG | + | chr7.1:3330010-3330029 | MS.gene050906:intron | 35.0% | |
| GTGAAGTTATAAGAAGATCG+AGG | - | chr7.1:3329120-3329139 | None:intergenic | 35.0% | |
| GTTAACCTTTGTCAATGATG+TGG | + | chr7.1:3327984-3328003 | MS.gene050906:intron | 35.0% | |
| GTTATCCCATTTGTACATAC+AGG | + | chr7.1:3329851-3329870 | MS.gene050906:CDS | 35.0% | |
| TAGACAAATTCCACTTTGGA+GGG | - | chr7.1:3328441-3328460 | None:intergenic | 35.0% | |
| TGATCTGAATGCTATATGCA+CGG | + | chr7.1:3327471-3327490 | MS.gene050906:intron | 35.0% | |
| TGTACAAATGGGATAACAAC+GGG | - | chr7.1:3329848-3329867 | None:intergenic | 35.0% | |
| TGTGAGTTTCTTATGAACGT+TGG | + | chr7.1:3327378-3327397 | MS.gene050906:intron | 35.0% | |
| TGTTTCATATGTATGTGGGT+GGG | - | chr7.1:3329051-3329070 | None:intergenic | 35.0% | |
| TTAAAAAAGTAAGCACCCCA+AGG | - | chr7.1:3328130-3328149 | None:intergenic | 35.0% | |
| TTGTTTCATATGTATGTGGG+TGG | - | chr7.1:3329052-3329071 | None:intergenic | 35.0% | |
| TTTGGCCTAATTGTTTGTTC+TGG | + | chr7.1:3328859-3328878 | MS.gene050906:intron | 35.0% | |
| ! | GCATCATACAGTCTTTTTCT+TGG | - | chr7.1:3330324-3330343 | None:intergenic | 35.0% |
| ! | GGTGAACATTTTGTTCTTTG+AGG | - | chr7.1:3330110-3330129 | None:intergenic | 35.0% |
| ! | GTTTAGGTTACTGTAATCGT+AGG | + | chr7.1:3330246-3330265 | MS.gene050906:intron | 35.0% |
| ! | TTTGTCAATGATGTGGCTTT+TGG | + | chr7.1:3327991-3328010 | MS.gene050906:intron | 35.0% |
| ! | TTTTTAACGGCATCAAACGA+AGG | + | chr7.1:3328143-3328162 | MS.gene050906:intron | 35.0% |
| !! | CAGGTTGATTGGGAATTATT+TGG | + | chr7.1:3330474-3330493 | MS.gene050906:CDS | 35.0% |
| !! | CAGTGCTGATAAATTCTGTA+TGG | + | chr7.1:3329228-3329247 | MS.gene050906:intron | 35.0% |
| !! | GAACATTTTGTTCTTTGAGG+AGG | - | chr7.1:3330107-3330126 | None:intergenic | 35.0% |
| !! | TCAGCATTGACAATTGTACT+AGG | - | chr7.1:3327242-3327261 | None:intergenic | 35.0% |
| !! | TCGATCTGTTAAAGTATTGC+CGG | + | chr7.1:3327819-3327838 | MS.gene050906:CDS | 35.0% |
| !!! | GAAAGCATTGGTTCTCTTTT+TGG | - | chr7.1:3327164-3327183 | None:intergenic | 35.0% |
| !!! | GCTATATTGCTAGCTTTTAG+TGG | + | chr7.1:3330039-3330058 | MS.gene050906:intron | 35.0% |
| !!! | GTAATTTTGAAGTGTGAGCA+AGG | + | chr7.1:3328368-3328387 | MS.gene050906:intron | 35.0% |
| !!! | TGGGGTGCTTACTTTTTTAA+CGG | + | chr7.1:3328130-3328149 | MS.gene050906:intron | 35.0% |
| AAAACTACACACTGCATTGC+TGG | + | chr7.1:3327517-3327536 | MS.gene050906:CDS | 40.0% | |
| AACTAATCCATCTCTTCTGC+AGG | + | chr7.1:3328490-3328509 | MS.gene050906:intron | 40.0% | |
| AACTGTTTCCATGCCTTCAA+AGG | - | chr7.1:3330738-3330757 | None:intergenic | 40.0% | |
| AAGACTGTATGATGCAGTAG+CGG | + | chr7.1:3330329-3330348 | MS.gene050906:CDS | 40.0% | |
| AATCATTTCCAGGACAGAAC+AGG | - | chr7.1:3328079-3328098 | None:intergenic | 40.0% | |
| ACACCTTACGTGTTCAAACT+TGG | + | chr7.1:3327276-3327295 | MS.gene050906:intron | 40.0% | |
| ACCTTGCATTTGTGTGTTTG+TGG | + | chr7.1:3327300-3327319 | MS.gene050906:intron | 40.0% | |
| ACGTACCATCTTTCCAATTC+TGG | - | chr7.1:3329912-3329931 | None:intergenic | 40.0% | |
| ACTAATCCATCTCTTCTGCA+GGG | + | chr7.1:3328491-3328510 | MS.gene050906:intron | 40.0% | |
| ACTGTTTCCATGCCTTCAAA+GGG | - | chr7.1:3330737-3330756 | None:intergenic | 40.0% | |
| ATACAGGATGCGAGGTTATA+TGG | + | chr7.1:3330620-3330639 | MS.gene050906:CDS | 40.0% | |
| ATCCCTGAGCTGTAATTGAA+GGG | - | chr7.1:3326624-3326643 | None:intergenic | 40.0% | |
| ATCCCTTCAATTACAGCTCA+GGG | + | chr7.1:3326619-3326638 | MS.gene050906:CDS | 40.0% | |
| ATGCACAGAACTGATAACTG+TGG | + | chr7.1:3327882-3327901 | MS.gene050906:intron | 40.0% | |
| ATGCAGGAGATTATGCCAAT+AGG | + | chr7.1:3329875-3329894 | MS.gene050906:CDS | 40.0% | |
| ATTTGTACATACAGGGATGC+AGG | + | chr7.1:3329859-3329878 | MS.gene050906:CDS | 40.0% | |
| CAATCGCATAGTAAGAGAGT+GGG | + | chr7.1:3330591-3330610 | MS.gene050906:CDS | 40.0% | |
| CACCTTACGTGTTCAAACTT+GGG | + | chr7.1:3327277-3327296 | MS.gene050906:intron | 40.0% | |
| CATTCCCAGAATTGGAAAGA+TGG | + | chr7.1:3329904-3329923 | MS.gene050906:CDS | 40.0% | |
| CGAAAGAATGCAGAAGTTAC+AGG | - | chr7.1:3327802-3327821 | None:intergenic | 40.0% | |
| CGTACCATCTTTCCAATTCT+GGG | - | chr7.1:3329911-3329930 | None:intergenic | 40.0% | |
| CTACTTAGTGGGAAAAGACT+TGG | - | chr7.1:3328917-3328936 | None:intergenic | 40.0% | |
| CTAGCATCCAAAAGAACTTG+TGG | - | chr7.1:3327733-3327752 | None:intergenic | 40.0% | |
| CTGATGGGGAAATTTACATC+AGG | - | chr7.1:3329800-3329819 | None:intergenic | 40.0% | |
| CTGATGTAAATTTCCCCATC+AGG | + | chr7.1:3329798-3329817 | MS.gene050906:intron | 40.0% | |
| GAACAAACGATGTCTGTAGT+CGG | - | chr7.1:3328782-3328801 | None:intergenic | 40.0% | |
| GATCTGAATGCTATATGCAC+GGG | + | chr7.1:3327472-3327491 | MS.gene050906:intron | 40.0% | |
| GCATCCCTGTATGTACAAAT+GGG | - | chr7.1:3329859-3329878 | None:intergenic | 40.0% | |
| GGAAAGCTCATAGATTGACT+AGG | - | chr7.1:3329997-3330016 | None:intergenic | 40.0% | |
| GTAGACAAATTCCACTTTGG+AGG | - | chr7.1:3328442-3328461 | None:intergenic | 40.0% | |
| GTCAATCTATGAGCTTTCCA+AGG | + | chr7.1:3329998-3330017 | MS.gene050906:intron | 40.0% | |
| TAGCAATGGAACAAGAGATG+CGG | + | chr7.1:3330400-3330419 | MS.gene050906:CDS | 40.0% | |
| TCTGAATTCAATCAGGAGTC+AGG | - | chr7.1:3330131-3330150 | None:intergenic | 40.0% | |
| TGCATCCCTGTATGTACAAA+TGG | - | chr7.1:3329860-3329879 | None:intergenic | 40.0% | |
| TTGTCAATGCTGATACTACC+AGG | + | chr7.1:3327249-3327268 | MS.gene050906:intron | 40.0% | |
| TTTATCTTCCTGTTCTGTCC+TGG | + | chr7.1:3328068-3328087 | MS.gene050906:intron | 40.0% | |
| TTTGAGAGGACAACTGTTTC+TGG | - | chr7.1:3330546-3330565 | None:intergenic | 40.0% | |
| ! | AGTCTTTTTCTTGGCACATC+CGG | - | chr7.1:3330315-3330334 | None:intergenic | 40.0% |
| ! | CAAGTCTTTTCCCACTAAGT+AGG | + | chr7.1:3328915-3328934 | MS.gene050906:intron | 40.0% |
| ! | GCTGTTGCTATTCCTATACT+TGG | + | chr7.1:3326973-3326992 | MS.gene050906:CDS | 40.0% |
| ! | TCTCTCTGTCACTTGGTTAT+GGG | + | chr7.1:3330070-3330089 | MS.gene050906:intron | 40.0% |
| ! | TGTGCTGACATTGAAAGCAT+TGG | - | chr7.1:3327176-3327195 | None:intergenic | 40.0% |
| !! | AATCTTGCAGCAGGTTGATT+GGG | + | chr7.1:3330464-3330483 | MS.gene050906:CDS | 40.0% |
| !! | CATTGCTAAAGTGTCGACTT+GGG | - | chr7.1:3330388-3330407 | None:intergenic | 40.0% |
| !!! | ATGCTCATGTTTTGAAGCAG+TGG | + | chr7.1:3330763-3330782 | MS.gene050906:CDS | 40.0% |
| !!! | GTTAGTTTTTATGCTGGGGT+TGG | + | chr7.1:3329086-3329105 | MS.gene050906:intron | 40.0% |
| AAACATCACCGCGATCAAGA+CGG | - | chr7.1:3326583-3326602 | None:intergenic | 45.0% | |
| AAATTGTACGGTTATGGCGG+CGG | - | chr7.1:3326679-3326698 | None:intergenic | 45.0% | |
| AATGACAAGTGGGTCATCCA+TGG | - | chr7.1:3327695-3327714 | None:intergenic | 45.0% | |
| ACCTCGTTTGCGATAGAAAG+AGG | - | chr7.1:3326792-3326811 | None:intergenic | 45.0% | |
| ACCTCTTTCTATCGCAAACG+AGG | + | chr7.1:3326788-3326807 | MS.gene050906:CDS | 45.0% | |
| ACTAAACATGGAGAAAGGCC+CGG | + | chr7.1:3330293-3330312 | MS.gene050906:CDS | 45.0% | |
| AGGAGCCGTGTTTATTAGAG+GGG | - | chr7.1:3328268-3328287 | None:intergenic | 45.0% | |
| CAAAGGCAAGCCTCTTCTTA+CGG | + | chr7.1:3327547-3327566 | MS.gene050906:CDS | 45.0% | |
| CATATGTATGTGGGTGGGTA+GGG | - | chr7.1:3329046-3329065 | None:intergenic | 45.0% | |
| CATCCAAGACAAACCTGATG+GGG | - | chr7.1:3329814-3329833 | None:intergenic | 45.0% | |
| CCAAGGTTCAAAATACGGGA+TGG | + | chr7.1:3330015-3330034 | MS.gene050906:intron | 45.0% | |
| CCAAGTCGACACTTTAGCAA+TGG | + | chr7.1:3330386-3330405 | MS.gene050906:CDS | 45.0% | |
| CCATCCAAGACAAACCTGAT+GGG | - | chr7.1:3329815-3329834 | None:intergenic | 45.0% | |
| CGATAGAAAGAGGTGGAAGA+AGG | - | chr7.1:3326782-3326801 | None:intergenic | 45.0% | |
| CTGGGGAAATTGTACGGTTA+TGG | - | chr7.1:3326685-3326704 | None:intergenic | 45.0% | |
| GACAATTGTACTAGGCCTCA+AGG | - | chr7.1:3327234-3327253 | None:intergenic | 45.0% | |
| GAGGAGCCGTGTTTATTAGA+GGG | - | chr7.1:3328269-3328288 | None:intergenic | 45.0% | |
| GATCCCTGAGCTGTAATTGA+AGG | - | chr7.1:3326625-3326644 | None:intergenic | 45.0% | |
| GATCCCTTCAATTACAGCTC+AGG | + | chr7.1:3326618-3326637 | MS.gene050906:CDS | 45.0% | |
| GATTTCCGTCCAGTTTGTAG+AGG | - | chr7.1:3328226-3328245 | None:intergenic | 45.0% | |
| GCAATCGCATAGTAAGAGAG+TGG | + | chr7.1:3330590-3330609 | MS.gene050906:CDS | 45.0% | |
| GCATCCAAAAGAACTTGTGG+AGG | - | chr7.1:3327730-3327749 | None:intergenic | 45.0% | |
| GCCACAAACACACAAATGCA+AGG | - | chr7.1:3327304-3327323 | None:intergenic | 45.0% | |
| GCGAGGTTATATGGATCAGA+TGG | + | chr7.1:3330629-3330648 | MS.gene050906:CDS | 45.0% | |
| GGAGTAACAGGTGTATGGAT+TGG | + | chr7.1:3327493-3327512 | MS.gene050906:intron | 45.0% | |
| GGGAAATTGTACGGTTATGG+CGG | - | chr7.1:3326682-3326701 | None:intergenic | 45.0% | |
| GTAAGAAGAGGCTTGCCTTT+GGG | - | chr7.1:3327548-3327567 | None:intergenic | 45.0% | |
| GTCCCAAGTTTGAACACGTA+AGG | - | chr7.1:3327282-3327301 | None:intergenic | 45.0% | |
| TAACCAAGTGACAGAGAGAG+TGG | - | chr7.1:3330069-3330088 | None:intergenic | 45.0% | |
| TAGAGAGATCTGCCCTTTGA+AGG | + | chr7.1:3330722-3330741 | MS.gene050906:CDS | 45.0% | |
| TCATATGTATGTGGGTGGGT+AGG | - | chr7.1:3329047-3329066 | None:intergenic | 45.0% | |
| TCCATCCAAGACAAACCTGA+TGG | - | chr7.1:3329816-3329835 | None:intergenic | 45.0% | |
| TCGTTTGCGATAGAAAGAGG+TGG | - | chr7.1:3326789-3326808 | None:intergenic | 45.0% | |
| TGAGGAGCCGTGTTTATTAG+AGG | - | chr7.1:3328270-3328289 | None:intergenic | 45.0% | |
| TGATCGGTTGCATGAACTGA+AGG | + | chr7.1:3330362-3330381 | MS.gene050906:CDS | 45.0% | |
| TGGATGCTAGAAACCTCAGA+TGG | + | chr7.1:3327743-3327762 | MS.gene050906:CDS | 45.0% | |
| TGGTTTCAATCCCTCCAAAG+TGG | + | chr7.1:3328428-3328447 | MS.gene050906:intron | 45.0% | |
| TTCACGCTCCAACTATCCTT+GGG | + | chr7.1:3328111-3328130 | MS.gene050906:intron | 45.0% | |
| TTTCCCCATCAGGTTTGTCT+TGG | + | chr7.1:3329808-3329827 | MS.gene050906:intron | 45.0% | |
| ! | AACACGTAAGGTGTTAAGCC+TGG | - | chr7.1:3327270-3327289 | None:intergenic | 45.0% |
| ! | AGAGAGTGGGTTTCTCATAC+AGG | + | chr7.1:3330604-3330623 | MS.gene050906:CDS | 45.0% |
| ! | AGATTCCTTTTGCACAGTGC+AGG | - | chr7.1:3327598-3327617 | None:intergenic | 45.0% |
| ! | CTAATGTCATTTGCTGCCAG+AGG | + | chr7.1:3330654-3330673 | MS.gene050906:CDS | 45.0% |
| ! | CTCTCTCTGTCACTTGGTTA+TGG | + | chr7.1:3330069-3330088 | MS.gene050906:intron | 45.0% |
| ! | CTTTCCAATTCTGGGAATGC+TGG | - | chr7.1:3329903-3329922 | None:intergenic | 45.0% |
| ! | GACTACCTTCTGGGAATATG+TGG | - | chr7.1:3328559-3328578 | None:intergenic | 45.0% |
| ! | GATTCCTTTTGCACAGTGCA+GGG | - | chr7.1:3327597-3327616 | None:intergenic | 45.0% |
| ! | GCTTCCTCCACAAGTTCTTT+TGG | + | chr7.1:3327723-3327742 | MS.gene050906:CDS | 45.0% |
| ! | GTCTTTTTCTTGGCACATCC+GGG | - | chr7.1:3330314-3330333 | None:intergenic | 45.0% |
| ! | TAGCGGCAAGAATTGGTGAT+CGG | + | chr7.1:3330346-3330365 | MS.gene050906:CDS | 45.0% |
| ! | TCTTCTGCAGGGAATGGATT+TGG | + | chr7.1:3328502-3328521 | MS.gene050906:intron | 45.0% |
| ! | TTGCACAAAGTGTCCATCTG+AGG | - | chr7.1:3327759-3327778 | None:intergenic | 45.0% |
| !! | AAGGGATATAAGGGTTGGCT+TGG | - | chr7.1:3329165-3329184 | None:intergenic | 45.0% |
| !! | ACGGGGTGATGGAATTTATC+AGG | + | chr7.1:3327846-3327865 | MS.gene050906:CDS | 45.0% |
| !! | AGCTCAGGGATCAAGTTGAA+TGG | + | chr7.1:3329315-3329334 | MS.gene050906:intron | 45.0% |
| !! | CCATCCCGTATTTTGAACCT+TGG | - | chr7.1:3330018-3330037 | None:intergenic | 45.0% |
| !! | CCATTGCTAAAGTGTCGACT+TGG | - | chr7.1:3330389-3330408 | None:intergenic | 45.0% |
| !! | GAACGGATTAAACCGTGTTC+AGG | + | chr7.1:3327017-3327036 | MS.gene050906:CDS | 45.0% |
| !! | GAATCTTGCAGCAGGTTGAT+TGG | + | chr7.1:3330463-3330482 | MS.gene050906:CDS | 45.0% |
| !! | GGGTGATGGAATTTATCAGG+AGG | + | chr7.1:3327849-3327868 | MS.gene050906:CDS | 45.0% |
| !! | TTAAAGTATTGCCGGTCGCA+CGG | + | chr7.1:3327827-3327846 | MS.gene050906:CDS | 45.0% |
| !!! | TAAAATTTTAATTTAGTTTT+TGG | + | chr7.1:3329426-3329445 | MS.gene050906:intron | 5.0% |
| AATGCCCTGCACTGTGCAAA+AGG | + | chr7.1:3327590-3327609 | MS.gene050906:intron | 50.0% | |
| ACAATTTCCCCAGATGCCGA+CGG | + | chr7.1:3326692-3326711 | MS.gene050906:CDS | 50.0% | |
| AGAAGTAACCGTCGGCATCT+GGG | - | chr7.1:3326703-3326722 | None:intergenic | 50.0% | |
| AGCAGCGAAGCAATGACAAG+TGG | - | chr7.1:3327706-3327725 | None:intergenic | 50.0% | |
| AGTGGAGGAGAAGTAACCGT+CGG | - | chr7.1:3326711-3326730 | None:intergenic | 50.0% | |
| ATGCCACTCTCTCTGTCACT+TGG | + | chr7.1:3330063-3330082 | MS.gene050906:intron | 50.0% | |
| CAAGGATAGTTGGAGCGTGA+AGG | - | chr7.1:3328112-3328131 | None:intergenic | 50.0% | |
| CCCATCAGGTTTGTCTTGGA+TGG | + | chr7.1:3329812-3329831 | MS.gene050906:intron | 50.0% | |
| CCTGACCTCTACAAACTGGA+CGG | + | chr7.1:3328218-3328237 | MS.gene050906:intron | 50.0% | |
| CGGCATCTGGGGAAATTGTA+CGG | - | chr7.1:3326691-3326710 | None:intergenic | 50.0% | |
| CGTAAGAAGAGGCTTGCCTT+TGG | - | chr7.1:3327549-3327568 | None:intergenic | 50.0% | |
| CGTCCAGTTTGTAGAGGTCA+GGG | - | chr7.1:3328220-3328239 | None:intergenic | 50.0% | |
| CTTCACGCTCCAACTATCCT+TGG | + | chr7.1:3328110-3328129 | MS.gene050906:intron | 50.0% | |
| GATGCAGTAGCGGCAAGAAT+TGG | + | chr7.1:3330339-3330358 | MS.gene050906:CDS | 50.0% | |
| GCAGCGAAGCAATGACAAGT+GGG | - | chr7.1:3327705-3327724 | None:intergenic | 50.0% | |
| GCATTGCTGGAAAGACCCAA+AGG | + | chr7.1:3327530-3327549 | MS.gene050906:CDS | 50.0% | |
| GCTATATGCACGGGAGTAAC+AGG | + | chr7.1:3327481-3327500 | MS.gene050906:intron | 50.0% | |
| GGTCATCCATGGAAGCAACA+TGG | - | chr7.1:3327684-3327703 | None:intergenic | 50.0% | |
| GGTTTCTCATACAGGATGCG+AGG | + | chr7.1:3330612-3330631 | MS.gene050906:CDS | 50.0% | |
| GTAAGCACCCCAAGGATAGT+TGG | - | chr7.1:3328122-3328141 | None:intergenic | 50.0% | |
| GTCCAGTTTGTAGAGGTCAG+GGG | - | chr7.1:3328219-3328238 | None:intergenic | 50.0% | |
| GTCTTGATCGCGGTGATGTT+TGG | + | chr7.1:3326582-3326601 | MS.gene050906:CDS | 50.0% | |
| GTTAAGCCAACGCTGAAGAG+TGG | - | chr7.1:3326729-3326748 | None:intergenic | 50.0% | |
| TCACGCTCCAACTATCCTTG+GGG | + | chr7.1:3328112-3328131 | MS.gene050906:intron | 50.0% | |
| TCCATCTCTTCTGCAGGGAA+TGG | + | chr7.1:3328496-3328515 | MS.gene050906:intron | 50.0% | |
| TCCATTCCCTGCAGAAGAGA+TGG | - | chr7.1:3328500-3328519 | None:intergenic | 50.0% | |
| TGGGTCCACATATTCCCAGA+AGG | + | chr7.1:3328551-3328570 | MS.gene050906:CDS | 50.0% | |
| TTCCCCTGACCTCTACAAAC+TGG | + | chr7.1:3328214-3328233 | MS.gene050906:intron | 50.0% | |
| ! | AGATCTGCCCTTTGAAGGCA+TGG | + | chr7.1:3330727-3330746 | MS.gene050906:CDS | 50.0% |
| ! | AGTGTCTGGAATCTTGCAGC+AGG | + | chr7.1:3330455-3330474 | MS.gene050906:CDS | 50.0% |
| ! | CAGCAACCATGTTGCTTCCA+TGG | + | chr7.1:3327675-3327694 | MS.gene050906:CDS | 50.0% |
| ! | CATGGTTTTTCCACCATCCC+GGG | - | chr7.1:3328585-3328604 | None:intergenic | 50.0% |
| ! | CCATGGTTTTTCCACCATCC+CGG | - | chr7.1:3328586-3328605 | None:intergenic | 50.0% |
| !! | AACTGTTTCTGGTGTCTGCG+TGG | - | chr7.1:3330535-3330554 | None:intergenic | 50.0% |
| !! | ATAAGGGTTGGCTTGGTGGT+TGG | - | chr7.1:3329158-3329177 | None:intergenic | 50.0% |
| !! | CGGGATGGTGGAAAAACCAT+GGG | + | chr7.1:3328584-3328603 | MS.gene050906:CDS | 50.0% |
| !! | GGATATAAGGGTTGGCTTGG+TGG | - | chr7.1:3329162-3329181 | None:intergenic | 50.0% |
| !! | TAAAGTATTGCCGGTCGCAC+GGG | + | chr7.1:3327828-3327847 | MS.gene050906:CDS | 50.0% |
| AAGCCAACGCTGAAGAGTGG+AGG | - | chr7.1:3326726-3326745 | None:intergenic | 55.0% | |
| ACCATGGGCTCTTGCAAGAG+AGG | + | chr7.1:3328599-3328618 | MS.gene050906:CDS | 55.0% | |
| ACCTCTCTTGCAAGAGCCCA+TGG | - | chr7.1:3328603-3328622 | None:intergenic | 55.0% | |
| CCGTCCAGTTTGTAGAGGTC+AGG | - | chr7.1:3328221-3328240 | None:intergenic | 55.0% | |
| CTGGGAATGCTGGCACCTAT+TGG | - | chr7.1:3329893-3329912 | None:intergenic | 55.0% | |
| GAAGTAACCGTCGGCATCTG+GGG | - | chr7.1:3326702-3326721 | None:intergenic | 55.0% | |
| GACACTCGTTCAGAGCTGTG+TGG | - | chr7.1:3330441-3330460 | None:intergenic | 55.0% | |
| GAGAAGTAACCGTCGGCATC+TGG | - | chr7.1:3326704-3326723 | None:intergenic | 55.0% | |
| GATTCAGATTCTGCTGGGCG+TGG | + | chr7.1:3330149-3330168 | MS.gene050906:intron | 55.0% | |
| GCACGGGAGTAACAGGTGTA+TGG | + | chr7.1:3327488-3327507 | MS.gene050906:intron | 55.0% | |
| GGTGCCAGCATTCCCAGAAT+TGG | + | chr7.1:3329896-3329915 | MS.gene050906:CDS | 55.0% | |
| TCTCCTCCACTCTTCAGCGT+TGG | + | chr7.1:3326720-3326739 | MS.gene050906:CDS | 55.0% | |
| !! | AAAGTATTGCCGGTCGCACG+GGG | + | chr7.1:3327829-3327848 | MS.gene050906:CDS | 55.0% |
| !! | CACAGCTCTGAACGAGTGTC+TGG | + | chr7.1:3330441-3330460 | MS.gene050906:CDS | 55.0% |
| !! | CCGGGATGGTGGAAAAACCA+TGG | + | chr7.1:3328583-3328602 | MS.gene050906:CDS | 55.0% |
| !! | CTTGCAAGAGAGGTGTTGCC+AGG | + | chr7.1:3328609-3328628 | MS.gene050906:CDS | 55.0% |
| ATTCCATCACCCCGTGCGAC+CGG | - | chr7.1:3327841-3327860 | None:intergenic | 60.0% | |
| GTATGTGGGTGGGTAGGGTG+CGG | - | chr7.1:3329041-3329060 | None:intergenic | 60.0% | |
| TATGTGGGTGGGTAGGGTGC+GGG | - | chr7.1:3329040-3329059 | None:intergenic | 60.0% | |
| TCCCAGAAGGTAGTCGCTCC+CGG | + | chr7.1:3328564-3328583 | MS.gene050906:CDS | 60.0% | |
| !! | GGTTGGCTTGGTGGTTGGTG+CGG | - | chr7.1:3329153-3329172 | None:intergenic | 60.0% |
| !! | GTTGGCTTGGTGGTTGGTGC+GGG | - | chr7.1:3329152-3329171 | None:intergenic | 60.0% |
| ATGTGGGTGGGTAGGGTGCG+GGG | - | chr7.1:3329039-3329058 | None:intergenic | 65.0% | |
| CCCAGAAGGTAGTCGCTCCC+GGG | + | chr7.1:3328565-3328584 | MS.gene050906:CDS | 65.0% | |
| CCCGGGAGCGACTACCTTCT+GGG | - | chr7.1:3328568-3328587 | None:intergenic | 65.0% | |
| GAAGGTAGTCGCTCCCGGGA+TGG | + | chr7.1:3328569-3328588 | MS.gene050906:CDS | 65.0% | |
| GAGTCGCCGTCGACCGACAT+TGG | + | chr7.1:3326651-3326670 | MS.gene050906:CDS | 65.0% | |
| TATGGCGGCGGCGCCAATGT+CGG | - | chr7.1:3326667-3326686 | None:intergenic | 65.0% | |
| TCCCGGGAGCGACTACCTTC+TGG | - | chr7.1:3328569-3328588 | None:intergenic | 65.0% | |
| GCGGCGCCAATGTCGGTCGA+CGG | - | chr7.1:3326660-3326679 | None:intergenic | 70.0% | |
| GGTAGTCGCTCCCGGGATGG+TGG | + | chr7.1:3328572-3328591 | MS.gene050906:CDS | 70.0% | |
| TGTGGGTGGGTAGGGTGCGG+GGG | - | chr7.1:3329038-3329057 | None:intergenic | 70.0% | |
| TTGCCGGTCGCACGGGGTGA+TGG | + | chr7.1:3327835-3327854 | MS.gene050906:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3326575 | 3330800 | 3326575 | ID=MS.gene050906 |
| chr7.1 | mRNA | 3326575 | 3330800 | 3326575 | ID=MS.gene050906.t1;Parent=MS.gene050906 |
| chr7.1 | exon | 3326575 | 3326809 | 3326575 | ID=MS.gene050906.t1.exon1;Parent=MS.gene050906.t1 |
| chr7.1 | CDS | 3326575 | 3326809 | 3326575 | ID=cds.MS.gene050906.t1;Parent=MS.gene050906.t1 |
| chr7.1 | exon | 3326920 | 3327038 | 3326920 | ID=MS.gene050906.t1.exon2;Parent=MS.gene050906.t1 |
| chr7.1 | CDS | 3326920 | 3327038 | 3326920 | ID=cds.MS.gene050906.t1;Parent=MS.gene050906.t1 |
| chr7.1 | exon | 3327503 | 3327568 | 3327503 | ID=MS.gene050906.t1.exon3;Parent=MS.gene050906.t1 |
| chr7.1 | CDS | 3327503 | 3327568 | 3327503 | ID=cds.MS.gene050906.t1;Parent=MS.gene050906.t1 |
| chr7.1 | exon | 3327673 | 3327870 | 3327673 | ID=MS.gene050906.t1.exon4;Parent=MS.gene050906.t1 |
| chr7.1 | CDS | 3327673 | 3327870 | 3327673 | ID=cds.MS.gene050906.t1;Parent=MS.gene050906.t1 |
| chr7.1 | exon | 3328512 | 3328630 | 3328512 | ID=MS.gene050906.t1.exon5;Parent=MS.gene050906.t1 |
| chr7.1 | CDS | 3328512 | 3328630 | 3328512 | ID=cds.MS.gene050906.t1;Parent=MS.gene050906.t1 |
| chr7.1 | exon | 3329820 | 3329925 | 3329820 | ID=MS.gene050906.t1.exon6;Parent=MS.gene050906.t1 |
| chr7.1 | CDS | 3329820 | 3329925 | 3329820 | ID=cds.MS.gene050906.t1;Parent=MS.gene050906.t1 |
| chr7.1 | exon | 3330252 | 3330800 | 3330252 | ID=MS.gene050906.t1.exon7;Parent=MS.gene050906.t1 |
| chr7.1 | CDS | 3330252 | 3330800 | 3330252 | ID=cds.MS.gene050906.t1;Parent=MS.gene050906.t1 |
| Gene Sequence |
| Protein sequence |
