Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051725.t1 | XP_024627233.1 | 88.5 | 514 | 45 | 3 | 1 | 500 | 1 | 514 | 2.20E-201 | 711.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051725.t1 | Q9FME2 | 40.3 | 380 | 194 | 6 | 1 | 369 | 1 | 358 | 7.9e-59 | 229.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051725.t1 | A0A396H244 | 88.5 | 514 | 45 | 3 | 1 | 500 | 1 | 514 | 1.6e-201 | 711.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051725 | MS.gene063501 | PPI |
| MS.gene051725 | MS.gene044455 | PPI |
| MS.gene044456 | MS.gene051725 | PPI |
| MS.gene033053 | MS.gene051725 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051725.t1 | MTR_7g055610 | 91.406 | 512 | 32 | 3 | 1 | 500 | 8 | 519 | 0.0 | 914 |
| MS.gene051725.t1 | MTR_7g057520 | 91.406 | 512 | 32 | 3 | 1 | 500 | 1 | 512 | 0.0 | 913 |
| MS.gene051725.t1 | MTR_4g109640 | 40.897 | 379 | 187 | 10 | 10 | 371 | 12 | 370 | 2.31e-75 | 242 |
| MS.gene051725.t1 | MTR_4g109640 | 40.849 | 377 | 186 | 10 | 10 | 369 | 12 | 368 | 2.58e-74 | 242 |
| MS.gene051725.t1 | MTR_4g109640 | 41.240 | 371 | 181 | 10 | 10 | 363 | 12 | 362 | 7.73e-74 | 238 |
| MS.gene051725.t1 | MTR_7g013840 | 39.740 | 385 | 186 | 9 | 10 | 369 | 12 | 375 | 1.25e-73 | 241 |
| MS.gene051725.t1 | MTR_4g083150 | 36.864 | 491 | 233 | 14 | 1 | 446 | 1 | 459 | 1.34e-73 | 240 |
| MS.gene051725.t1 | MTR_7g013840 | 39.637 | 386 | 186 | 9 | 10 | 369 | 12 | 376 | 2.01e-73 | 240 |
| MS.gene051725.t1 | MTR_7g098440 | 31.429 | 455 | 251 | 17 | 15 | 425 | 13 | 450 | 3.35e-41 | 154 |
| MS.gene051725.t1 | MTR_1g045800 | 29.973 | 367 | 206 | 11 | 8 | 344 | 7 | 352 | 2.29e-33 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051725.t1 | AT3G25150 | 43.110 | 508 | 226 | 14 | 7 | 490 | 8 | 476 | 3.84e-103 | 318 |
| MS.gene051725.t1 | AT3G25150 | 43.110 | 508 | 226 | 14 | 7 | 490 | 107 | 575 | 2.74e-102 | 318 |
| MS.gene051725.t1 | AT5G60980 | 40.209 | 383 | 189 | 6 | 1 | 369 | 1 | 357 | 1.62e-68 | 227 |
| MS.gene051725.t1 | AT5G60980 | 40.209 | 383 | 189 | 6 | 1 | 369 | 1 | 357 | 1.62e-68 | 227 |
| MS.gene051725.t1 | AT5G60980 | 40.104 | 384 | 189 | 6 | 1 | 369 | 1 | 358 | 1.97e-68 | 227 |
| MS.gene051725.t1 | AT5G60980 | 40.104 | 384 | 189 | 6 | 1 | 369 | 1 | 358 | 1.97e-68 | 227 |
| MS.gene051725.t1 | AT5G48650 | 37.500 | 424 | 218 | 12 | 12 | 399 | 13 | 425 | 4.02e-65 | 218 |
| MS.gene051725.t1 | AT1G13730 | 32.619 | 420 | 222 | 13 | 1 | 400 | 1 | 379 | 2.64e-47 | 170 |
| MS.gene051725.t1 | AT1G13730 | 32.619 | 420 | 222 | 13 | 1 | 400 | 1 | 379 | 2.64e-47 | 170 |
| MS.gene051725.t1 | AT2G03640 | 31.365 | 491 | 250 | 18 | 3 | 476 | 2 | 422 | 1.30e-43 | 159 |
| MS.gene051725.t1 | AT1G69250 | 31.938 | 454 | 254 | 17 | 1 | 446 | 1 | 407 | 2.54e-43 | 159 |
| MS.gene051725.t1 | AT2G03640 | 30.957 | 491 | 251 | 17 | 3 | 476 | 2 | 421 | 2.36e-42 | 156 |
| MS.gene051725.t1 | AT2G03640 | 30.957 | 491 | 251 | 17 | 3 | 476 | 2 | 421 | 2.36e-42 | 156 |
| MS.gene051725.t1 | AT2G03640 | 30.957 | 491 | 251 | 17 | 3 | 476 | 2 | 421 | 2.36e-42 | 156 |
| MS.gene051725.t1 | AT2G03640 | 34.444 | 360 | 190 | 13 | 3 | 353 | 2 | 324 | 1.72e-40 | 152 |
| MS.gene051725.t1 | AT1G69250 | 33.065 | 372 | 208 | 13 | 1 | 368 | 1 | 335 | 1.13e-39 | 148 |
| MS.gene051725.t1 | AT5G43960 | 30.334 | 389 | 220 | 11 | 15 | 369 | 11 | 382 | 2.15e-32 | 129 |
| MS.gene051725.t1 | AT3G07250 | 31.443 | 388 | 204 | 16 | 10 | 381 | 3 | 344 | 3.12e-31 | 128 |
| MS.gene051725.t1 | AT5G43960 | 30.640 | 297 | 159 | 8 | 106 | 369 | 41 | 323 | 3.17e-24 | 104 |
| MS.gene051725.t1 | AT3G55540 | 33.600 | 125 | 77 | 4 | 15 | 133 | 32 | 156 | 6.19e-13 | 70.5 |
| MS.gene051725.t1 | AT3G24463 | 35.922 | 103 | 62 | 4 | 13 | 111 | 9 | 111 | 2.30e-11 | 62.0 |
Find 138 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAAGGCCACTCAGTTTC+AGG | 0.164891 | 7.3:-49965112 | MS.gene051725:CDS |
| TCTTCGGCACTTCTTCAATT+TGG | 0.175338 | 7.3:+49967400 | None:intergenic |
| AATAGCCGTTCAGACTTTAA+TGG | 0.204493 | 7.3:-49964954 | MS.gene051725:CDS |
| GAAGTCTACAATCCAGAAAA+TGG | 0.212664 | 7.3:-49967552 | MS.gene051725:CDS |
| ATACTAGAACCATTTGTTTC+AGG | 0.227152 | 7.3:+49967022 | None:intergenic |
| CTTCGGCACTTCTTCAATTT+GGG | 0.237490 | 7.3:+49967401 | None:intergenic |
| GGAGTCATTGTCTTGGTCAC+TGG | 0.284606 | 7.3:-49967917 | MS.gene051725:CDS |
| GAGAATATGTTCAAGAAGTT+TGG | 0.285207 | 7.3:-49966777 | MS.gene051725:CDS |
| GGAAGAGGGGAATATGGATA+TGG | 0.296622 | 7.3:-49964933 | MS.gene051725:CDS |
| TTTAATGGAAGAGGGGAATA+TGG | 0.309866 | 7.3:-49964939 | MS.gene051725:CDS |
| ATCTACCACTGCTCGTGTTC+CGG | 0.316044 | 7.3:-49964784 | MS.gene051725:CDS |
| GGCAGAGGGCATGGAAACTA+TGG | 0.318726 | 7.3:-49965131 | MS.gene051725:CDS |
| ACACGAGCAGTGGTAGATTT+AGG | 0.324177 | 7.3:+49964789 | None:intergenic |
| GAGTCATTGTCTTGGTCACT+GGG | 0.328550 | 7.3:-49967916 | MS.gene051725:CDS |
| TATGGAAATAGCCGAAGTTT+TGG | 0.332929 | 7.3:-49965062 | MS.gene051725:CDS |
| TGGACACCGCCACTCTTGAT+AGG | 0.341350 | 7.3:+49966753 | None:intergenic |
| GCAAGAGGGCATGGAAACTA+TGG | 0.365956 | 7.3:-49965080 | MS.gene051725:CDS |
| GTGGATGCACAAGAGTCTTT+TGG | 0.375158 | 7.3:-49967944 | MS.gene051725:CDS |
| GCTGCTTTCTGTGAATCATT+AGG | 0.376741 | 7.3:+49967474 | None:intergenic |
| TACACAGAAGGTAGCTGAAT+TGG | 0.396416 | 7.3:-49967427 | MS.gene051725:CDS |
| ATACCTTTGCTGTCCTAACT+TGG | 0.400943 | 7.3:+49966733 | None:intergenic |
| AGGGCATGTGTAGCAGTTCC+AGG | 0.407057 | 7.3:+49966804 | None:intergenic |
| TCAACAAGAACCTCAGAAAC+AGG | 0.415714 | 7.3:+49967501 | None:intergenic |
| TAAAACCTATGCACATGCTC+AGG | 0.418125 | 7.3:+49968607 | None:intergenic |
| GGGAATATGGATATGGGTAT+AGG | 0.421991 | 7.3:-49964926 | MS.gene051725:CDS |
| TGGGTATAGGAATGGCAATC+GGG | 0.424405 | 7.3:-49964913 | MS.gene051725:CDS |
| CACAGAAGCAGCTGTCATTA+CGG | 0.429670 | 7.3:+49967105 | None:intergenic |
| AGCATCATGTTACCATTCTC+AGG | 0.433770 | 7.3:+49967737 | None:intergenic |
| ATGGGTATAGGAATGGCAAT+CGG | 0.436524 | 7.3:-49964914 | MS.gene051725:CDS |
| TTCCTTGCTCCTCAAGAGAA+AGG | 0.437287 | 7.3:-49967845 | MS.gene051725:CDS |
| TGACTGCTGAGGATGGTGAT+AGG | 0.438498 | 7.3:-49967584 | MS.gene051725:CDS |
| AGTGTTGGATCCTCCTGTGC+TGG | 0.440145 | 7.3:-49967634 | MS.gene051725:CDS |
| AGAGTGGCGGTGTCCAAGTT+AGG | 0.440879 | 7.3:-49966746 | MS.gene051725:CDS |
| CCGATGATACCATCTGGTTC+AGG | 0.443109 | 7.3:+49968559 | None:intergenic |
| TTGGTCACTGGGTTTATGAT+AGG | 0.445866 | 7.3:-49967905 | MS.gene051725:CDS |
| GACCGAGCTTACTGACATCT+TGG | 0.456560 | 7.3:+49968584 | None:intergenic |
| AACAGTCGTGGAGACTATAA+TGG | 0.461729 | 7.3:-49964990 | MS.gene051725:CDS |
| AACAGTCGTGGAGACTATAA+TGG | 0.461729 | 7.3:-49965026 | MS.gene051725:CDS |
| CGTTCAGACTTTAATGGAAG+AGG | 0.468224 | 7.3:-49964948 | MS.gene051725:CDS |
| ATGGAGGCATATGATTTCTT+CGG | 0.469501 | 7.3:+49967384 | None:intergenic |
| GCCACTCAGTTTCAGGGATG+AGG | 0.470258 | 7.3:-49965105 | MS.gene051725:CDS |
| ATTTATTTGAGAGGGCTGCC+TGG | 0.473653 | 7.3:-49966822 | MS.gene051725:CDS |
| ACTCTTGTGCATCCACAGAT+AGG | 0.475539 | 7.3:+49967951 | None:intergenic |
| TTCTGTTCAGGTTATGGCAG+AGG | 0.481492 | 7.3:-49965146 | MS.gene051725:CDS |
| AAGTCTACAATCCAGAAAAT+GGG | 0.483272 | 7.3:-49967551 | MS.gene051725:CDS |
| GGAGATCCAATGTCATGATC+AGG | 0.484436 | 7.3:+49967767 | None:intergenic |
| TGTTGATGAAAATGAAATCA+AGG | 0.484974 | 7.3:-49967792 | MS.gene051725:CDS |
| TGACAAGAAGATACTGTCAA+TGG | 0.484996 | 7.3:-49967999 | MS.gene051725:CDS |
| GATGAGGGAGCAAGAGGGCA+TGG | 0.486475 | 7.3:-49965089 | MS.gene051725:CDS |
| GTTTATCAGGGATTTCACTT+TGG | 0.487116 | 7.3:-49966633 | MS.gene051725:intron |
| TCTCCTGCCTCTCCTGAGAA+TGG | 0.504733 | 7.3:-49967749 | MS.gene051725:intron |
| ACAAAGTAGCCTTTCTCTTG+AGG | 0.505893 | 7.3:+49967836 | None:intergenic |
| GCTACCTTCTGTGTATCATC+AGG | 0.507667 | 7.3:+49967435 | None:intergenic |
| GGAACTTGTGTCTCCAGCAC+AGG | 0.507872 | 7.3:+49967621 | None:intergenic |
| ATAGATATACATACAACATC+AGG | 0.509761 | 7.3:+49968932 | None:intergenic |
| GCAGTCACAGATATTTGCTC+TGG | 0.513035 | 7.3:+49967600 | None:intergenic |
| GAAGAGGGGAATATGGATAT+GGG | 0.513469 | 7.3:-49964932 | MS.gene051725:CDS |
| TTACCATTCTCAGGAGAGGC+AGG | 0.514038 | 7.3:+49967746 | None:intergenic |
| TGGAAGGCCACTCAGTTTCA+GGG | 0.515875 | 7.3:-49965111 | MS.gene051725:CDS |
| TCAGGTTATGGCAGAGGGCA+TGG | 0.518859 | 7.3:-49965140 | MS.gene051725:CDS |
| TCCAGTGTGCCTGAAACAAA+TGG | 0.519573 | 7.3:-49967031 | MS.gene051725:CDS |
| TACCAAGATGTCAGTAAGCT+CGG | 0.526213 | 7.3:-49968586 | MS.gene051725:CDS |
| TTCAGAGAATCAAGTTCCTC+CGG | 0.526348 | 7.3:-49968957 | MS.gene051725:CDS |
| GCTATTCAATTTATTTGAGA+GGG | 0.527276 | 7.3:-49966830 | MS.gene051725:CDS |
| AATGATTCACAGAAAGCAGC+TGG | 0.531023 | 7.3:-49967471 | MS.gene051725:CDS |
| GGCTATTCAATTTATTTGAG+AGG | 0.531523 | 7.3:-49966831 | MS.gene051725:CDS |
| GACAAGAAGATACTGTCAAT+GGG | 0.533669 | 7.3:-49967998 | MS.gene051725:CDS |
| ACCATTTGTTTCAGGCACAC+TGG | 0.537368 | 7.3:+49967030 | None:intergenic |
| GTTCAGACTTTAATGGAAGA+GGG | 0.540785 | 7.3:-49964947 | MS.gene051725:CDS |
| CGTGTTCCGGCCTCTGCTTG+AGG | 0.544497 | 7.3:-49964771 | None:intergenic |
| TCTGTTCAGGTTATGGCAGA+GGG | 0.545340 | 7.3:-49965145 | MS.gene051725:CDS |
| AGTGGCCGCATGAATCGTAC+TGG | 0.546281 | 7.3:-49964834 | MS.gene051725:CDS |
| AGTACGATTCATGCGGCCAC+TGG | 0.547213 | 7.3:+49964836 | None:intergenic |
| GTAGCTTAAGGTAATGAAAG+AGG | 0.550794 | 7.3:-49967143 | MS.gene051725:intron |
| AGTCTCCACGGCCAAAACTT+CGG | 0.551552 | 7.3:+49965051 | None:intergenic |
| GCCGCATGAATCGTACTGGC+GGG | 0.551714 | 7.3:-49964830 | MS.gene051725:CDS |
| TCTAGTATAAGTACTAATGA+AGG | 0.557933 | 7.3:-49967007 | MS.gene051725:CDS |
| TATGGATATGGGTATAGGAA+TGG | 0.558422 | 7.3:-49964921 | MS.gene051725:CDS |
| AAGGAACCTGATCATGACAT+TGG | 0.558690 | 7.3:-49967773 | MS.gene051725:CDS |
| AGAGGCCGGAACACGAGCAG+TGG | 0.559072 | 7.3:+49964779 | None:intergenic |
| TAGCTTCCTCAAGCAGAGGC+CGG | 0.560957 | 7.3:+49964765 | None:intergenic |
| TTCAGGGATGAGGGAGCAAG+AGG | 0.562453 | 7.3:-49965095 | MS.gene051725:CDS |
| CCACTCAGTTTCAGGGATGA+GGG | 0.563881 | 7.3:-49965104 | MS.gene051725:CDS |
| GACTGCTGAGGATGGTGATA+GGG | 0.564877 | 7.3:-49967583 | MS.gene051725:CDS |
| AGTATAAGTACTAATGAAGG+TGG | 0.568379 | 7.3:-49967004 | MS.gene051725:CDS |
| CTCTTCCATTAAAGTCTGAA+CGG | 0.573202 | 7.3:+49964949 | None:intergenic |
| CCTGAACCAGATGGTATCAT+CGG | 0.573611 | 7.3:-49968559 | MS.gene051725:CDS |
| TTTGTTTCAGGCACACTGGA+TGG | 0.574807 | 7.3:+49967034 | None:intergenic |
| GGCCGCATGAATCGTACTGG+CGG | 0.577176 | 7.3:-49964831 | MS.gene051725:CDS |
| AGCCTTTCTCTTGAGGAGCA+AGG | 0.578397 | 7.3:+49967843 | None:intergenic |
| GGACACCGCCACTCTTGATA+GGG | 0.579408 | 7.3:+49966754 | None:intergenic |
| GCAAGTGTCTGTTGAAGAAG+AGG | 0.582143 | 7.3:-49967529 | MS.gene051725:CDS |
| AAAACCTATGCACATGCTCA+GGG | 0.586213 | 7.3:+49968608 | None:intergenic |
| GGGTATAGGAATGGCAATCG+GGG | 0.586798 | 7.3:-49964912 | MS.gene051725:CDS |
| AGAGGAAGCTCCTGTTTCTG+AGG | 0.590853 | 7.3:-49967511 | MS.gene051725:CDS |
| CACTGGGTTTATGATAGGAA+AGG | 0.597377 | 7.3:-49967900 | MS.gene051725:CDS |
| CGTGGAGACTATAATGGCCG+CGG | 0.602209 | 7.3:-49964984 | MS.gene051725:CDS |
| CGTGGAGACTATAATGGCCG+CGG | 0.602209 | 7.3:-49965020 | MS.gene051725:CDS |
| ACTTGTGTCTCCAGCACAGG+AGG | 0.604167 | 7.3:+49967624 | None:intergenic |
| TCTTGAACATATTCTCAACA+AGG | 0.606195 | 7.3:+49966784 | None:intergenic |
| GCAGCTGTCATTACGGAGGA+CGG | 0.611765 | 7.3:+49967112 | None:intergenic |
| CCCTCATCCCTGAAACTGAG+TGG | 0.612765 | 7.3:+49965104 | None:intergenic |
| CACGACTGTTATAGTCTCCA+CGG | 0.614892 | 7.3:+49965039 | None:intergenic |
| ATACATACAACATCAGGTGC+CGG | 0.615319 | 7.3:+49968938 | None:intergenic |
| GCAAATATCTGTGACTGCTG+AGG | 0.616027 | 7.3:-49967595 | MS.gene051725:CDS |
| GTGATGCCGATGATACCATC+TGG | 0.617679 | 7.3:+49968553 | None:intergenic |
| TGCTGCGCTAAGTGCAATCG+AGG | 0.621802 | 7.3:-49966586 | MS.gene051725:intron |
| ATATCTGTGACTGCTGAGGA+TGG | 0.626749 | 7.3:-49967591 | MS.gene051725:CDS |
| CGCGGAGACTATAACAGTCG+TGG | 0.630267 | 7.3:-49965002 | MS.gene051725:CDS |
| TTCAGACTTTAATGGAAGAG+GGG | 0.635546 | 7.3:-49964946 | MS.gene051725:CDS |
| TAGTGCGGAGATCCTATCTG+TGG | 0.636226 | 7.3:-49967963 | MS.gene051725:CDS |
| AAAGCCCTGAGCATGTGCAT+AGG | 0.637108 | 7.3:-49968612 | MS.gene051725:CDS |
| GGAAACAATCAAGAAACTGA+AGG | 0.637783 | 7.3:-49966983 | MS.gene051725:intron |
| CTCGGTCGTCCTGAACCAGA+TGG | 0.638160 | 7.3:-49968568 | MS.gene051725:CDS |
| TGTTCCTGATGATACACAGA+AGG | 0.641677 | 7.3:-49967439 | MS.gene051725:CDS |
| GGAAGAGACTCTTACAATGG+AGG | 0.644795 | 7.3:+49967368 | None:intergenic |
| CATGTTACCATTCTCAGGAG+AGG | 0.648742 | 7.3:+49967742 | None:intergenic |
| GGGTTATAGTGAACTTAGTG+CGG | 0.649351 | 7.3:-49967978 | MS.gene051725:CDS |
| TCAGGGATGAGGGAGCAAGA+GGG | 0.650471 | 7.3:-49965094 | MS.gene051725:CDS |
| AAGTTTGGCCCTATCAAGAG+TGG | 0.651104 | 7.3:-49966762 | MS.gene051725:CDS |
| TATAGGAATGGCAATCGGGG+AGG | 0.652840 | 7.3:-49964909 | MS.gene051725:CDS |
| CTTGAACATATTCTCAACAA+GGG | 0.657058 | 7.3:+49966785 | None:intergenic |
| CATCGGCATCACAACTACAA+TGG | 0.657270 | 7.3:-49968542 | MS.gene051725:CDS |
| GAGGGCATGGAAACTATGGA+AGG | 0.657762 | 7.3:-49965127 | MS.gene051725:CDS |
| CGTGGAGACTATAACAGTCG+TGG | 0.663202 | 7.3:-49965038 | MS.gene051725:CDS |
| AATGATCACATGGGAACCAG+TGG | 0.667641 | 7.3:-49964852 | MS.gene051725:CDS |
| ATATCAGAGAAATGATCACA+TGG | 0.669840 | 7.3:-49964862 | MS.gene051725:CDS |
| TGTATAGCTTCCTCAAGCAG+AGG | 0.677594 | 7.3:+49964761 | None:intergenic |
| TGTCCAAGTTAGGACAGCAA+AGG | 0.677658 | 7.3:-49966736 | MS.gene051725:intron |
| TCAGGCACACTGGATGGTGA+AGG | 0.681317 | 7.3:+49967040 | None:intergenic |
| ATAGTAGTACTGTTCAACAA+AGG | 0.683995 | 7.3:+49968645 | None:intergenic |
| TTTGGCCCTATCAAGAGTGG+CGG | 0.685024 | 7.3:-49966759 | MS.gene051725:CDS |
| ACCCGCCAGTACGATTCATG+CGG | 0.688659 | 7.3:+49964829 | None:intergenic |
| TATCAGAGAAATGATCACAT+GGG | 0.696631 | 7.3:-49964861 | MS.gene051725:CDS |
| CATACAACATCAGGTGCCGG+AGG | 0.709159 | 7.3:+49968941 | None:intergenic |
| AGAAGCAGCTGTCATTACGG+AGG | 0.730010 | 7.3:+49967108 | None:intergenic |
| AACGGCTATTGAAGTCTCCG+CGG | 0.748532 | 7.3:+49964967 | None:intergenic |
| CACGACTGTTATAGTCTCCG+CGG | 0.755967 | 7.3:+49965003 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATACATATATATATA+TGG | + | chr7.3:49966790-49966809 | None:intergenic | 10.0% |
| !! | TTAAAAAAAACAAAAAAACA+GGG | + | chr7.3:49967045-49967064 | None:intergenic | 10.0% |
| !! | TTTAAAAAAAACAAAAAAAC+AGG | + | chr7.3:49967046-49967065 | None:intergenic | 10.0% |
| !!! | AATAAAATGTTTTTAAAACT+TGG | - | chr7.3:49968027-49968046 | MS.gene051725:intron | 10.0% |
| !!! | TTTATTATGTTATATTTTGT+GGG | - | chr7.3:49968354-49968373 | MS.gene051725:intron | 10.0% |
| !!! | TTTTATTATGTTATATTTTG+TGG | - | chr7.3:49968353-49968372 | MS.gene051725:intron | 10.0% |
| !! | AACTTAGATTCTAATAAATA+TGG | - | chr7.3:49965608-49965627 | MS.gene051725:intron | 15.0% |
| !! | ATGATAACTATGAAATTTAT+TGG | - | chr7.3:49967831-49967850 | MS.gene051725:CDS | 15.0% |
| !! | TGATAACTATGAAATTTATT+GGG | - | chr7.3:49967832-49967851 | MS.gene051725:CDS | 15.0% |
| !!! | CTTTAATTTGTATCTTTATT+TGG | - | chr7.3:49967652-49967671 | MS.gene051725:intron | 15.0% |
| !!! | TTATTATGTTATATTTTGTG+GGG | - | chr7.3:49968355-49968374 | MS.gene051725:intron | 15.0% |
| !! | TAACATTTACAATGAAAACT+CGG | + | chr7.3:49966436-49966455 | None:intergenic | 20.0% |
| !! | TAGAATCTAAGTTAACAAAT+GGG | + | chr7.3:49965601-49965620 | None:intergenic | 20.0% |
| !! | TATTTATTGATGTGTTCAAT+TGG | - | chr7.3:49966865-49966884 | MS.gene051725:intron | 20.0% |
| !! | TTAGAATCTAAGTTAACAAA+TGG | + | chr7.3:49965602-49965621 | None:intergenic | 20.0% |
| !!! | ATGCTTTTTTATTTGGTTTT+TGG | - | chr7.3:49967568-49967587 | MS.gene051725:CDS | 20.0% |
| !!! | ATTTTTAATGTGATTGGTTT+AGG | - | chr7.3:49965061-49965080 | MS.gene051725:CDS | 20.0% |
| !!! | GTTTTAAAAAGGATACAAAA+TGG | - | chr7.3:49968219-49968238 | MS.gene051725:intron | 20.0% |
| ! | AAAAGTTATCACAACAAAGT+TGG | + | chr7.3:49968336-49968355 | None:intergenic | 25.0% |
| ! | AAGATATTGTACAAACCAAT+TGG | + | chr7.3:49965374-49965393 | None:intergenic | 25.0% |
| ! | AATAAGCAACTTAAGTTAAC+AGG | + | chr7.3:49966068-49966087 | None:intergenic | 25.0% |
| ! | AGAAATCTCTTTACAACTTA+TGG | + | chr7.3:49967892-49967911 | None:intergenic | 25.0% |
| ! | ATAACTTCTTGGCATATTAA+TGG | - | chr7.3:49967082-49967101 | MS.gene051725:CDS | 25.0% |
| ! | ATAGATATACATACAACATC+AGG | + | chr7.3:49964809-49964828 | None:intergenic | 25.0% |
| ! | GCTATTCAATTTATTTGAGA+GGG | - | chr7.3:49966908-49966927 | MS.gene051725:intron | 25.0% |
| ! | TAACTTCTTGGCATATTAAT+GGG | - | chr7.3:49967083-49967102 | MS.gene051725:CDS | 25.0% |
| ! | TCAATATTCATATCTCCAAT+TGG | - | chr7.3:49965356-49965375 | MS.gene051725:intron | 25.0% |
| ! | TCTAGTATAAGTACTAATGA+AGG | - | chr7.3:49966731-49966750 | MS.gene051725:intron | 25.0% |
| !! | AATACTTTTATCTGCATTTC+AGG | - | chr7.3:49967680-49967699 | MS.gene051725:intron | 25.0% |
| !! | TGTTGATGAAAATGAAATCA+AGG | - | chr7.3:49965946-49965965 | MS.gene051725:intron | 25.0% |
| !! | TTATTATTTTCCTCTGTAAC+TGG | - | chr7.3:49966562-49966581 | MS.gene051725:intron | 25.0% |
| !!! | AGTGCTTTTTTATTTAGTAC+TGG | - | chr7.3:49967769-49967788 | MS.gene051725:CDS | 25.0% |
| !!! | CTCTGAAATAATTTCTTTCT+GGG | + | chr7.3:49968482-49968501 | None:intergenic | 25.0% |
| !!! | TAATATGCTTTTTTGTAGCT+GGG | + | chr7.3:49968278-49968297 | None:intergenic | 25.0% |
| !!! | TGACTGATTTTTAATGTGAT+TGG | - | chr7.3:49965055-49965074 | MS.gene051725:CDS | 25.0% |
| AAAAAGGATTTAACCCTCTA+CGG | + | chr7.3:49967525-49967544 | None:intergenic | 30.0% | |
| AAAACACTCAATAGTGTACA+AGG | + | chr7.3:49968177-49968196 | None:intergenic | 30.0% | |
| AAATCCTTGTACACTATTGA+GGG | - | chr7.3:49968170-49968189 | MS.gene051725:intron | 30.0% | |
| AAATTTATTGGGTTCGTGTA+TGG | - | chr7.3:49967843-49967862 | MS.gene051725:CDS | 30.0% | |
| AAGAAATTACACCAATGCAT+AGG | + | chr7.3:49965455-49965474 | None:intergenic | 30.0% | |
| AAGTCTACAATCCAGAAAAT+GGG | - | chr7.3:49966187-49966206 | MS.gene051725:intron | 30.0% | |
| AATATCACTATGATAAACGC+AGG | + | chr7.3:49966849-49966868 | None:intergenic | 30.0% | |
| AATCGCTATTTGACAACATT+GGG | - | chr7.3:49964994-49965013 | MS.gene051725:CDS | 30.0% | |
| AATTTCACTGTAGAACAAGA+TGG | + | chr7.3:49967279-49967298 | None:intergenic | 30.0% | |
| ACTGGATTATGTTGTCTTTA+AGG | - | chr7.3:49967499-49967518 | MS.gene051725:CDS | 30.0% | |
| AGTATAAGTACTAATGAAGG+TGG | - | chr7.3:49966734-49966753 | MS.gene051725:intron | 30.0% | |
| ATACTAGAACCATTTGTTTC+AGG | + | chr7.3:49966719-49966738 | None:intergenic | 30.0% | |
| ATAGTAGTACTGTTCAACAA+AGG | + | chr7.3:49965096-49965115 | None:intergenic | 30.0% | |
| ATATCACTATGATAAACGCA+GGG | + | chr7.3:49966848-49966867 | None:intergenic | 30.0% | |
| ATATCAGAGAAATGATCACA+TGG | - | chr7.3:49968876-49968895 | MS.gene051725:intron | 30.0% | |
| CAAATACAATGAGAACTTAG+TGG | + | chr7.3:49967428-49967447 | None:intergenic | 30.0% | |
| CACCATTTCTCATAATTACA+GGG | - | chr7.3:49967970-49967989 | MS.gene051725:CDS | 30.0% | |
| CACTAAGTTCTCATTGTATT+TGG | - | chr7.3:49967426-49967445 | MS.gene051725:CDS | 30.0% | |
| CATGTGCAGAAATAGTAATT+TGG | + | chr7.3:49967814-49967833 | None:intergenic | 30.0% | |
| CCAGAAAGAAATTATTTCAG+AGG | - | chr7.3:49968480-49968499 | MS.gene051725:intron | 30.0% | |
| CTACATGCAAATGAATAGAA+AGG | + | chr7.3:49967368-49967387 | None:intergenic | 30.0% | |
| CTTGAACATATTCTCAACAA+GGG | + | chr7.3:49966956-49966975 | None:intergenic | 30.0% | |
| CTTTATAGCTGTCTATGTAT+TGG | - | chr7.3:49965270-49965289 | MS.gene051725:intron | 30.0% | |
| GAGAATATGTTCAAGAAGTT+TGG | - | chr7.3:49966961-49966980 | MS.gene051725:intron | 30.0% | |
| GGCTATTCAATTTATTTGAG+AGG | - | chr7.3:49966907-49966926 | MS.gene051725:intron | 30.0% | |
| GTTAACAAATGGGAATTTAG+AGG | + | chr7.3:49965591-49965610 | None:intergenic | 30.0% | |
| TAAATCCTTGTACACTATTG+AGG | - | chr7.3:49968196-49968215 | MS.gene051725:intron | 30.0% | |
| TAACCATGTTGTAATACTCT+TGG | - | chr7.3:49965408-49965427 | MS.gene051725:intron | 30.0% | |
| TAATCGCTATTTGACAACAT+TGG | - | chr7.3:49964993-49965012 | MS.gene051725:CDS | 30.0% | |
| TACACTAGTTGTTGAACAAA+AGG | + | chr7.3:49968078-49968097 | None:intergenic | 30.0% | |
| TACCCTGTAATTATGAGAAA+TGG | + | chr7.3:49967975-49967994 | None:intergenic | 30.0% | |
| TATATATCCAGAGCAATGTT+CGG | + | chr7.3:49965493-49965512 | None:intergenic | 30.0% | |
| TATCAACTCCATAATGTCTT+TGG | + | chr7.3:49968002-49968021 | None:intergenic | 30.0% | |
| TATCAGAGAAATGATCACAT+GGG | - | chr7.3:49968877-49968896 | MS.gene051725:intron | 30.0% | |
| TATTCTTGACTCTATTACAC+TGG | - | chr7.3:49966463-49966482 | MS.gene051725:intron | 30.0% | |
| TCTTGAACATATTCTCAACA+AGG | + | chr7.3:49966957-49966976 | None:intergenic | 30.0% | |
| TTAAAGACAACATAATCCAG+TGG | + | chr7.3:49967500-49967519 | None:intergenic | 30.0% | |
| ! | AAACTTTTGGCATACAACTA+GGG | - | chr7.3:49968515-49968534 | MS.gene051725:intron | 30.0% |
| ! | TACTGGTTAATTTCACATCA+AGG | - | chr7.3:49967786-49967805 | MS.gene051725:CDS | 30.0% |
| ! | TTATATTTTGTGGGGTTCAT+TGG | - | chr7.3:49968363-49968382 | MS.gene051725:intron | 30.0% |
| !! | AAAAGCATCAGCAAGTAATT+AGG | + | chr7.3:49965545-49965564 | None:intergenic | 30.0% |
| !! | AAGTCTCAAAGGTATTGATT+TGG | - | chr7.3:49968104-49968123 | MS.gene051725:intron | 30.0% |
| !! | CCTCTGAAATAATTTCTTTC+TGG | + | chr7.3:49968483-49968502 | None:intergenic | 30.0% |
| !! | GCATATTAATGGGTTTATCA+GGG | - | chr7.3:49967093-49967112 | MS.gene051725:CDS | 30.0% |
| !! | TTAATGTGATTGGTTTAGGT+TGG | - | chr7.3:49965065-49965084 | MS.gene051725:CDS | 30.0% |
| !!! | CACTATTGAGGGTTTTAAAA+AGG | - | chr7.3:49968208-49968227 | MS.gene051725:intron | 30.0% |
| !!! | CACTTCGATGCTTTTTTATT+TGG | - | chr7.3:49967561-49967580 | MS.gene051725:CDS | 30.0% |
| !!! | GTAATATGCTTTTTTGTAGC+TGG | + | chr7.3:49968279-49968298 | None:intergenic | 30.0% |
| !!! | TTAAGGCGTGGTTTTATTAA+GGG | - | chr7.3:49966023-49966042 | MS.gene051725:intron | 30.0% |
| !!! | TTGATTTGGTCACTTTTTGA+TGG | - | chr7.3:49968118-49968137 | MS.gene051725:intron | 30.0% |
| AAAACCCTCAATAGTGTACA+AGG | + | chr7.3:49968204-49968223 | None:intergenic | 35.0% | |
| AAAATGCACACAAGAACCAA+AGG | + | chr7.3:49965321-49965340 | None:intergenic | 35.0% | |
| AATAGCCGTTCAGACTTTAA+TGG | - | chr7.3:49968784-49968803 | MS.gene051725:intron | 35.0% | |
| AGAAAGGAAGAGGGAATTTA+TGG | + | chr7.3:49966394-49966413 | None:intergenic | 35.0% | |
| ATTTGCATGTAGTGTTTGTG+TGG | - | chr7.3:49967376-49967395 | MS.gene051725:intron | 35.0% | |
| CATACAATGTTGTGAATCGT+GGG | - | chr7.3:49964844-49964863 | MS.gene051725:CDS | 35.0% | |
| CCACCATTTCTCATAATTAC+AGG | - | chr7.3:49967969-49967988 | MS.gene051725:CDS | 35.0% | |
| CCAGGACACATGAAAATTAA+GGG | + | chr7.3:49967452-49967471 | None:intergenic | 35.0% | |
| CCTGTAATTATGAGAAATGG+TGG | + | chr7.3:49967972-49967991 | None:intergenic | 35.0% | |
| CTAGTTGTATGCCAAAAGTT+TGG | + | chr7.3:49968516-49968535 | None:intergenic | 35.0% | |
| CTCTTCCATTAAAGTCTGAA+CGG | + | chr7.3:49968792-49968811 | None:intergenic | 35.0% | |
| GAAGTCTACAATCCAGAAAA+TGG | - | chr7.3:49966186-49966205 | MS.gene051725:intron | 35.0% | |
| GAATGGTAACATGATGCTTA+AGG | - | chr7.3:49966006-49966025 | MS.gene051725:intron | 35.0% | |
| GAATTTAGAGGATCGTACAA+TGG | + | chr7.3:49965579-49965598 | None:intergenic | 35.0% | |
| GACAAGAAGATACTGTCAAT+GGG | - | chr7.3:49965740-49965759 | MS.gene051725:intron | 35.0% | |
| GGAAACAATCAAGAAACTGA+AGG | - | chr7.3:49966755-49966774 | MS.gene051725:CDS | 35.0% | |
| GGTGGACAGAAATTTATTGA+AGG | + | chr7.3:49967954-49967973 | None:intergenic | 35.0% | |
| GTAGCTTAAGGTAATGAAAG+AGG | - | chr7.3:49966595-49966614 | MS.gene051725:CDS | 35.0% | |
| GTTCAGACTTTAATGGAAGA+GGG | - | chr7.3:49968791-49968810 | MS.gene051725:intron | 35.0% | |
| GTTTATCAGGGATTTCACTT+TGG | - | chr7.3:49967105-49967124 | MS.gene051725:CDS | 35.0% | |
| TAAAGAGATTTCTCTCACAC+TGG | - | chr7.3:49967899-49967918 | MS.gene051725:CDS | 35.0% | |
| TATGGAAGAGACTCTTACAA+TGG | + | chr7.3:49966376-49966395 | None:intergenic | 35.0% | |
| TATGGATATGGGTATAGGAA+TGG | - | chr7.3:49968817-49968836 | MS.gene051725:intron | 35.0% | |
| TCATACAATGTTGTGAATCG+TGG | - | chr7.3:49964843-49964862 | MS.gene051725:CDS | 35.0% | |
| TCTTCTTTCTACAAATCCAC+AGG | - | chr7.3:49967236-49967255 | MS.gene051725:intron | 35.0% | |
| TGACAAGAAGATACTGTCAA+TGG | - | chr7.3:49965739-49965758 | MS.gene051725:intron | 35.0% | |
| TTCAGACTTTAATGGAAGAG+GGG | - | chr7.3:49968792-49968811 | MS.gene051725:intron | 35.0% | |
| TTTAATGGAAGAGGGGAATA+TGG | - | chr7.3:49968799-49968818 | MS.gene051725:intron | 35.0% | |
| TTTCTTATGCTTCTGAGTTG+TGG | - | chr7.3:49967338-49967357 | MS.gene051725:intron | 35.0% | |
| ! | ATGGAGGCATATGATTTCTT+CGG | + | chr7.3:49966357-49966376 | None:intergenic | 35.0% |
| ! | CAAACTTTTGGCATACAACT+AGG | - | chr7.3:49968514-49968533 | MS.gene051725:intron | 35.0% |
| ! | GTGTAGATTTGAAGTCTCAA+AGG | - | chr7.3:49968093-49968112 | MS.gene051725:intron | 35.0% |
| ! | TAGTGCTATAGTTCTGCTAT+AGG | - | chr7.3:49964906-49964925 | MS.gene051725:CDS | 35.0% |
| ! | TATGGAAATAGCCGAAGTTT+TGG | - | chr7.3:49968676-49968695 | MS.gene051725:intron | 35.0% |
| ! | TATGGATTGAGTGTTAGAAG+TGG | - | chr7.3:49965626-49965645 | MS.gene051725:intron | 35.0% |
| ! | TGCAATCGTCTGATTTGTAT+TGG | - | chr7.3:49967603-49967622 | MS.gene051725:CDS | 35.0% |
| ! | TTATTTTCCTCTGTAACTGG+TGG | - | chr7.3:49966565-49966584 | MS.gene051725:intron | 35.0% |
| !! | CAAAACTTCTAAAATCAGCC+AGG | + | chr7.3:49967470-49967489 | None:intergenic | 35.0% |
| !! | GGCATATTAATGGGTTTATC+AGG | - | chr7.3:49967092-49967111 | MS.gene051725:CDS | 35.0% |
| !! | GTGCAATCGAGGTATTTTAT+TGG | - | chr7.3:49967163-49967182 | MS.gene051725:intron | 35.0% |
| !! | TGCATTTTCTGTTCAGGTTA+TGG | - | chr7.3:49968586-49968605 | MS.gene051725:CDS | 35.0% |
| !!! | CTTAAGGCGTGGTTTTATTA+AGG | - | chr7.3:49966022-49966041 | MS.gene051725:intron | 35.0% |
| !!! | GAAGTTTTGTTCATTACCAC+TGG | - | chr7.3:49967481-49967500 | MS.gene051725:CDS | 35.0% |
| AAAACCTATGCACATGCTCA+GGG | + | chr7.3:49965133-49965152 | None:intergenic | 40.0% | |
| AACAGTCGTGGAGACTATAA+TGG | - | chr7.3:49968712-49968731 | MS.gene051725:intron | 40.0% | |
| AAGGAACCTGATCATGACAT+TGG | - | chr7.3:49965965-49965984 | MS.gene051725:intron | 40.0% | |
| AATGATTCACAGAAAGCAGC+TGG | - | chr7.3:49966267-49966286 | MS.gene051725:intron | 40.0% | |
| ACAAAGTAGCCTTTCTCTTG+AGG | + | chr7.3:49965905-49965924 | None:intergenic | 40.0% | |
| ACACCAATGCATAGGCATAT+GGG | + | chr7.3:49965447-49965466 | None:intergenic | 40.0% | |
| ACTGTAGAACAAGATGGCAA+AGG | + | chr7.3:49967273-49967292 | None:intergenic | 40.0% | |
| AGAAAGAGCAAGAAAGGAAG+AGG | + | chr7.3:49966404-49966423 | None:intergenic | 40.0% | |
| AGCATCAGCAAGTAATTAGG+TGG | + | chr7.3:49965542-49965561 | None:intergenic | 40.0% | |
| AGCATCATGTTACCATTCTC+AGG | + | chr7.3:49966004-49966023 | None:intergenic | 40.0% | |
| ATACATACAACATCAGGTGC+CGG | + | chr7.3:49964803-49964822 | None:intergenic | 40.0% | |
| ATGGGTATAGGAATGGCAAT+CGG | - | chr7.3:49968824-49968843 | MS.gene051725:intron | 40.0% | |
| CAACTCCATAATGTCTTTGG+AGG | + | chr7.3:49967999-49968018 | None:intergenic | 40.0% | |
| CAACTTATGGCATGCAAACA+AGG | + | chr7.3:49967879-49967898 | None:intergenic | 40.0% | |
| CAATCAAGAAACTGAAGGTC+TGG | - | chr7.3:49966760-49966779 | MS.gene051725:CDS | 40.0% | |
| CACTGGGTTTATGATAGGAA+AGG | - | chr7.3:49965838-49965857 | MS.gene051725:intron | 40.0% | |
| CATCAGCAAGTAATTAGGTG+GGG | + | chr7.3:49965540-49965559 | None:intergenic | 40.0% | |
| CCTATTTCATTTCACCAAGC+AGG | - | chr7.3:49965712-49965731 | MS.gene051725:intron | 40.0% | |
| CGTTCAGACTTTAATGGAAG+AGG | - | chr7.3:49968790-49968809 | MS.gene051725:intron | 40.0% | |
| CTTCGGCACTTCTTCAATTT+GGG | + | chr7.3:49966340-49966359 | None:intergenic | 40.0% | |
| CTTCTTGTCAATTTCCTGCT+TGG | + | chr7.3:49965729-49965748 | None:intergenic | 40.0% | |
| GAAAAGAGGTCAACTAATCG+AGG | - | chr7.3:49967744-49967763 | MS.gene051725:intron | 40.0% | |
| GAAAGAGCAAGAAAGGAAGA+GGG | + | chr7.3:49966403-49966422 | None:intergenic | 40.0% | |
| GAAGAGGGGAATATGGATAT+GGG | - | chr7.3:49968806-49968825 | MS.gene051725:intron | 40.0% | |
| GAGTCTAGAAAGAGCAAGAA+AGG | + | chr7.3:49966410-49966429 | None:intergenic | 40.0% | |
| GCATCAGCAAGTAATTAGGT+GGG | + | chr7.3:49965541-49965560 | None:intergenic | 40.0% | |
| GCCAGGACACATGAAAATTA+AGG | + | chr7.3:49967453-49967472 | None:intergenic | 40.0% | |
| GCTGCTAGCTAATAACTTCT+TGG | - | chr7.3:49967071-49967090 | MS.gene051725:CDS | 40.0% | |
| GGGAATATGGATATGGGTAT+AGG | - | chr7.3:49968812-49968831 | MS.gene051725:intron | 40.0% | |
| GGGTTATAGTGAACTTAGTG+CGG | - | chr7.3:49965760-49965779 | MS.gene051725:intron | 40.0% | |
| TAAAACCTATGCACATGCTC+AGG | + | chr7.3:49965134-49965153 | None:intergenic | 40.0% | |
| TACACAGAAGGTAGCTGAAT+TGG | - | chr7.3:49966311-49966330 | MS.gene051725:intron | 40.0% | |
| TACACCAATGCATAGGCATA+TGG | + | chr7.3:49965448-49965467 | None:intergenic | 40.0% | |
| TACCAAGATGTCAGTAAGCT+CGG | - | chr7.3:49965152-49965171 | MS.gene051725:CDS | 40.0% | |
| TCAACAAGAACCTCAGAAAC+AGG | + | chr7.3:49966240-49966259 | None:intergenic | 40.0% | |
| TCTTCGGCACTTCTTCAATT+TGG | + | chr7.3:49966341-49966360 | None:intergenic | 40.0% | |
| TGACGGTCATTGATCAGAAT+TGG | + | chr7.3:49967711-49967730 | None:intergenic | 40.0% | |
| TGCCAAAAGTTTGGCAATAC+AGG | + | chr7.3:49968507-49968526 | None:intergenic | 40.0% | |
| TGTTCCTGATGATACACAGA+AGG | - | chr7.3:49966299-49966318 | MS.gene051725:intron | 40.0% | |
| TTCAGAGAATCAAGTTCCTC+CGG | - | chr7.3:49964781-49964800 | MS.gene051725:CDS | 40.0% | |
| TTGGTCACTGGGTTTATGAT+AGG | - | chr7.3:49965833-49965852 | MS.gene051725:intron | 40.0% | |
| ! | ATACCTTTGCTGTCCTAACT+TGG | + | chr7.3:49967008-49967027 | None:intergenic | 40.0% |
| ! | ATGTTGTGAATCGTGGGTTA+CGG | - | chr7.3:49964850-49964869 | MS.gene051725:CDS | 40.0% |
| ! | CCCTTAATTTTCATGTGTCC+TGG | - | chr7.3:49967449-49967468 | MS.gene051725:CDS | 40.0% |
| ! | CCTGCTTGGTGAAATGAAAT+AGG | + | chr7.3:49965715-49965734 | None:intergenic | 40.0% |
| ! | GCTGCTTTCTGTGAATCATT+AGG | + | chr7.3:49966267-49966286 | None:intergenic | 40.0% |
| ! | GCTGTTTGCATTTTCTGTTC+AGG | - | chr7.3:49968580-49968599 | MS.gene051725:CDS | 40.0% |
| ! | GTCCTGTATTGCCAAACTTT+TGG | - | chr7.3:49968502-49968521 | MS.gene051725:intron | 40.0% |
| !! | GACAGCAAAGGTATTTCACT+TGG | - | chr7.3:49967014-49967033 | MS.gene051725:CDS | 40.0% |
| !! | GAGCCAAGAGTATTACAACA+TGG | + | chr7.3:49965414-49965433 | None:intergenic | 40.0% |
| !!! | GGGATTTCACTTTGGTTTTG+TGG | - | chr7.3:49967113-49967132 | MS.gene051725:CDS | 40.0% |
| !!! | TGGTTTTGTGGAGTTTGAAG+AGG | - | chr7.3:49967125-49967144 | MS.gene051725:CDS | 40.0% |
| AACAGATCCACCAGTTACAG+AGG | + | chr7.3:49966575-49966594 | None:intergenic | 45.0% | |
| AAGTTTGGCCCTATCAAGAG+TGG | - | chr7.3:49966976-49966995 | MS.gene051725:intron | 45.0% | |
| AATAGCCCTCAGCTGTCAAA+AGG | + | chr7.3:49966894-49966913 | None:intergenic | 45.0% | |
| AATGATCACATGGGAACCAG+TGG | - | chr7.3:49968886-49968905 | MS.gene051725:intron | 45.0% | |
| ACACCCATATGCCTATGCAT+TGG | - | chr7.3:49965441-49965460 | MS.gene051725:intron | 45.0% | |
| ACACGAGCAGTGGTAGATTT+AGG | + | chr7.3:49968952-49968971 | None:intergenic | 45.0% | |
| ACCATTTGTTTCAGGCACAC+TGG | + | chr7.3:49966711-49966730 | None:intergenic | 45.0% | |
| ACGTTGTGGTAGAGGAAAAG+AGG | - | chr7.3:49967730-49967749 | MS.gene051725:intron | 45.0% | |
| ACTCTTGTGCATCCACAGAT+AGG | + | chr7.3:49965790-49965809 | None:intergenic | 45.0% | |
| AGAACCAAAGGCTACACATG+AGG | + | chr7.3:49965309-49965328 | None:intergenic | 45.0% | |
| ATATCCAGAGCAATGTTCGG+AGG | + | chr7.3:49965490-49965509 | None:intergenic | 45.0% | |
| ATATCTGTGACTGCTGAGGA+TGG | - | chr7.3:49966147-49966166 | MS.gene051725:intron | 45.0% | |
| ATGGCATGCAAACAAGGAAC+AGG | + | chr7.3:49967873-49967892 | None:intergenic | 45.0% | |
| ATTTATTTGAGAGGGCTGCC+TGG | - | chr7.3:49966916-49966935 | MS.gene051725:intron | 45.0% | |
| CACAGAAGCAGCTGTCATTA+CGG | + | chr7.3:49966636-49966655 | None:intergenic | 45.0% | |
| CACGACTGTTATAGTCTCCA+CGG | + | chr7.3:49968702-49968721 | None:intergenic | 45.0% | |
| CATACCTCATGTGTAGCCTT+TGG | - | chr7.3:49965302-49965321 | MS.gene051725:intron | 45.0% | |
| CATCGGCATCACAACTACAA+TGG | - | chr7.3:49965196-49965215 | MS.gene051725:intron | 45.0% | |
| CATGTTACCATTCTCAGGAG+AGG | + | chr7.3:49965999-49966018 | None:intergenic | 45.0% | |
| CCAACACTGAAAGAAGGTTG+AGG | + | chr7.3:49966092-49966111 | None:intergenic | 45.0% | |
| CCTCAACCTTCTTTCAGTGT+TGG | - | chr7.3:49966089-49966108 | MS.gene051725:intron | 45.0% | |
| CCTGAACCAGATGGTATCAT+CGG | - | chr7.3:49965179-49965198 | MS.gene051725:intron | 45.0% | |
| GAGGATCCAACACTGAAAGA+AGG | + | chr7.3:49966098-49966117 | None:intergenic | 45.0% | |
| GAGTCATTGTCTTGGTCACT+GGG | - | chr7.3:49965822-49965841 | MS.gene051725:intron | 45.0% | |
| GCAAATATCTGTGACTGCTG+AGG | - | chr7.3:49966143-49966162 | MS.gene051725:intron | 45.0% | |
| GCAAGTGTCTGTTGAAGAAG+AGG | - | chr7.3:49966209-49966228 | MS.gene051725:intron | 45.0% | |
| GCAGTCACAGATATTTGCTC+TGG | + | chr7.3:49966141-49966160 | None:intergenic | 45.0% | |
| GCTACCTTCTGTGTATCATC+AGG | + | chr7.3:49966306-49966325 | None:intergenic | 45.0% | |
| GGAAGAGACTCTTACAATGG+AGG | + | chr7.3:49966373-49966392 | None:intergenic | 45.0% | |
| GGAAGAGGGGAATATGGATA+TGG | - | chr7.3:49968805-49968824 | MS.gene051725:intron | 45.0% | |
| GGAGATCCAATGTCATGATC+AGG | + | chr7.3:49965974-49965993 | None:intergenic | 45.0% | |
| GGTAGCCTCCAAAGACATTA+TGG | - | chr7.3:49967991-49968010 | MS.gene051725:CDS | 45.0% | |
| GGTGGATCTGTTGTAGCTTA+AGG | - | chr7.3:49966583-49966602 | MS.gene051725:intron | 45.0% | |
| GTAACATGATGCTTAAGGCG+TGG | - | chr7.3:49966011-49966030 | MS.gene051725:intron | 45.0% | |
| TCCAGTGTGCCTGAAACAAA+TGG | - | chr7.3:49966707-49966726 | MS.gene051725:intron | 45.0% | |
| TGGGTATAGGAATGGCAATC+GGG | - | chr7.3:49968825-49968844 | MS.gene051725:intron | 45.0% | |
| TGTCCAAGTTAGGACAGCAA+AGG | - | chr7.3:49967002-49967021 | MS.gene051725:CDS | 45.0% | |
| TTCCTTGCTCCTCAAGAGAA+AGG | - | chr7.3:49965893-49965912 | MS.gene051725:intron | 45.0% | |
| TTTCCTCTACCACAACGTGA+CGG | + | chr7.3:49967728-49967747 | None:intergenic | 45.0% | |
| TTTGTTTCAGGCACACTGGA+TGG | + | chr7.3:49966707-49966726 | None:intergenic | 45.0% | |
| ! | ACAGACACTTGCCCATTTTC+TGG | + | chr7.3:49966201-49966220 | None:intergenic | 45.0% |
| ! | ATGCACAAGAGTCTTTTGGC+GGG | - | chr7.3:49965798-49965817 | MS.gene051725:intron | 45.0% |
| ! | GATGCACAAGAGTCTTTTGG+CGG | - | chr7.3:49965797-49965816 | MS.gene051725:intron | 45.0% |
| ! | GTGGATGCACAAGAGTCTTT+TGG | - | chr7.3:49965794-49965813 | MS.gene051725:intron | 45.0% |
| ! | TCGTGGGTTACGGAAAATAG+CGG | - | chr7.3:49964860-49964879 | MS.gene051725:CDS | 45.0% |
| ! | TCTGTTCAGGTTATGGCAGA+GGG | - | chr7.3:49968593-49968612 | MS.gene051725:CDS | 45.0% |
| ! | TTCTGTTCAGGTTATGGCAG+AGG | - | chr7.3:49968592-49968611 | MS.gene051725:CDS | 45.0% |
| !! | GTTGTCTTTAAGGCCGTAGA+GGG | - | chr7.3:49967509-49967528 | MS.gene051725:CDS | 45.0% |
| !! | TGTTGTCTTTAAGGCCGTAG+AGG | - | chr7.3:49967508-49967527 | MS.gene051725:CDS | 45.0% |
| !!! | CTTTTTTGTAGCTGGGTGCT+AGG | + | chr7.3:49968271-49968290 | None:intergenic | 45.0% |
| !! | TAAAAATGAAAAATAAAAAA+AGG | + | chr7.3:49967541-49967560 | None:intergenic | 5.0% |
| AAAGCCCTGAGCATGTGCAT+AGG | - | chr7.3:49965126-49965145 | MS.gene051725:CDS | 50.0% | |
| AAAGGAGCAACATGTGCCTG+TGG | + | chr7.3:49967255-49967274 | None:intergenic | 50.0% | |
| AGAAGCAGCTGTCATTACGG+AGG | + | chr7.3:49966633-49966652 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr7.3:49965228-49965247 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGGACTCA+CGG | + | chr7.3:49965222-49965241 | None:intergenic | 50.0% | |
| AGCCTTTCTCTTGAGGAGCA+AGG | + | chr7.3:49965898-49965917 | None:intergenic | 50.0% | |
| AGTCTCCACGGCCAAAACTT+CGG | + | chr7.3:49968690-49968709 | None:intergenic | 50.0% | |
| ATCTACCACTGCTCGTGTTC+CGG | - | chr7.3:49968954-49968973 | MS.gene051725:CDS | 50.0% | |
| ATGGAAGGCCACTCAGTTTC+AGG | - | chr7.3:49968626-49968645 | MS.gene051725:CDS | 50.0% | |
| CAAACCTCCGAACATTGCTC+TGG | - | chr7.3:49965483-49965502 | MS.gene051725:intron | 50.0% | |
| CACGACTGTTATAGTCTCCG+CGG | + | chr7.3:49968738-49968757 | None:intergenic | 50.0% | |
| CCACTCAGTTTCAGGGATGA+GGG | - | chr7.3:49968634-49968653 | MS.gene051725:CDS | 50.0% | |
| CGTGGAGACTATAACAGTCG+TGG | - | chr7.3:49968700-49968719 | MS.gene051725:intron | 50.0% | |
| GACCGAGCTTACTGACATCT+TGG | + | chr7.3:49965157-49965176 | None:intergenic | 50.0% | |
| GACTGCTGAGGATGGTGATA+GGG | - | chr7.3:49966155-49966174 | MS.gene051725:intron | 50.0% | |
| GATCAATGACCGTCACGTTG+TGG | - | chr7.3:49967716-49967735 | MS.gene051725:intron | 50.0% | |
| GCAAGTAATTAGGTGGGGTC+TGG | + | chr7.3:49965535-49965554 | None:intergenic | 50.0% | |
| GGAGTCATTGTCTTGGTCAC+TGG | - | chr7.3:49965821-49965840 | MS.gene051725:intron | 50.0% | |
| GGCTACACATGAGGTATGAG+AGG | + | chr7.3:49965300-49965319 | None:intergenic | 50.0% | |
| GGGTATAGGAATGGCAATCG+GGG | - | chr7.3:49968826-49968845 | MS.gene051725:intron | 50.0% | |
| GTGATGCCGATGATACCATC+TGG | + | chr7.3:49965188-49965207 | None:intergenic | 50.0% | |
| TAGTGCGGAGATCCTATCTG+TGG | - | chr7.3:49965775-49965794 | MS.gene051725:intron | 50.0% | |
| TATAGGAATGGCAATCGGGG+AGG | - | chr7.3:49968829-49968848 | MS.gene051725:intron | 50.0% | |
| TGACTGCTGAGGATGGTGAT+AGG | - | chr7.3:49966154-49966173 | MS.gene051725:intron | 50.0% | |
| TGGAAGGCCACTCAGTTTCA+GGG | - | chr7.3:49968627-49968646 | MS.gene051725:CDS | 50.0% | |
| TTACCATTCTCAGGAGAGGC+AGG | + | chr7.3:49965995-49966014 | None:intergenic | 50.0% | |
| TTTGGCCCTATCAAGAGTGG+CGG | - | chr7.3:49966979-49966998 | MS.gene051725:intron | 50.0% | |
| ! | CCGATGATACCATCTGGTTC+AGG | + | chr7.3:49965182-49965201 | None:intergenic | 50.0% |
| ! | GAGGGCATGGAAACTATGGA+AGG | - | chr7.3:49968611-49968630 | MS.gene051725:CDS | 50.0% |
| ! | GCAAGAGGGCATGGAAACTA+TGG | - | chr7.3:49968658-49968677 | MS.gene051725:CDS | 50.0% |
| ! | GGTTGCCTTTTGACAGCTGA+GGG | - | chr7.3:49966886-49966905 | MS.gene051725:intron | 50.0% |
| ! | TGCACAAGAGTCTTTTGGCG+GGG | - | chr7.3:49965799-49965818 | MS.gene051725:intron | 50.0% |
| ! | TGGTTGCCTTTTGACAGCTG+AGG | - | chr7.3:49966885-49966904 | MS.gene051725:intron | 50.0% |
| ! | TGTGGGGTTCATTGGTTGCT+TGG | - | chr7.3:49968371-49968390 | MS.gene051725:intron | 50.0% |
| !! | AATAGCCGAAGTTTTGGCCG+TGG | - | chr7.3:49968682-49968701 | MS.gene051725:intron | 50.0% |
| !! | AGAGGAAGCTCCTGTTTCTG+AGG | - | chr7.3:49966227-49966246 | MS.gene051725:intron | 50.0% |
| !! | GGAGGTTTTTCTAGTCGTGG+TGG | - | chr7.3:49968847-49968866 | MS.gene051725:intron | 50.0% |
| !! | TTTTCTAGTCGTGGTGGCGA+TGG | - | chr7.3:49968853-49968872 | MS.gene051725:intron | 50.0% |
| ACCCGCCAGTACGATTCATG+CGG | + | chr7.3:49968912-49968931 | None:intergenic | 55.0% | |
| ACTTGTGTCTCCAGCACAGG+AGG | + | chr7.3:49966117-49966136 | None:intergenic | 55.0% | |
| AGAGTGGCGGTGTCCAAGTT+AGG | - | chr7.3:49966992-49967011 | MS.gene051725:CDS | 55.0% | |
| AGGGCATGTGTAGCAGTTCC+AGG | + | chr7.3:49966937-49966956 | None:intergenic | 55.0% | |
| AGTACGATTCATGCGGCCAC+TGG | + | chr7.3:49968905-49968924 | None:intergenic | 55.0% | |
| AGTGGCCGCATGAATCGTAC+TGG | - | chr7.3:49968904-49968923 | MS.gene051725:intron | 55.0% | |
| CCCTCATCCCTGAAACTGAG+TGG | + | chr7.3:49968637-49968656 | None:intergenic | 55.0% | |
| CGCGGAGACTATAACAGTCG+TGG | - | chr7.3:49968736-49968755 | MS.gene051725:intron | 55.0% | |
| CGTGGAGACTATAATGGCCG+CGG | - | chr7.3:49968718-49968737 | MS.gene051725:intron | 55.0% | |
| GCAGCTGTCATTACGGAGGA+CGG | + | chr7.3:49966629-49966648 | None:intergenic | 55.0% | |
| GCCACTCAGTTTCAGGGATG+AGG | - | chr7.3:49968633-49968652 | MS.gene051725:CDS | 55.0% | |
| GGAACTTGTGTCTCCAGCAC+AGG | + | chr7.3:49966120-49966139 | None:intergenic | 55.0% | |
| GGACACCGCCACTCTTGATA+GGG | + | chr7.3:49966987-49967006 | None:intergenic | 55.0% | |
| TCAGGCACACTGGATGGTGA+AGG | + | chr7.3:49966701-49966720 | None:intergenic | 55.0% | |
| TCAGGGATGAGGGAGCAAGA+GGG | - | chr7.3:49968644-49968663 | MS.gene051725:CDS | 55.0% | |
| TCAGGTTATGGCAGAGGGCA+TGG | - | chr7.3:49968598-49968617 | MS.gene051725:CDS | 55.0% | |
| TCTCCTGCCTCTCCTGAGAA+TGG | - | chr7.3:49965989-49966008 | MS.gene051725:intron | 55.0% | |
| TGACCGTCACGTTGTGGTAG+AGG | - | chr7.3:49967722-49967741 | MS.gene051725:intron | 55.0% | |
| TGCTGCGCTAAGTGCAATCG+AGG | - | chr7.3:49967152-49967171 | MS.gene051725:intron | 55.0% | |
| TGGACACCGCCACTCTTGAT+AGG | + | chr7.3:49966988-49967007 | None:intergenic | 55.0% | |
| TTCAGGGATGAGGGAGCAAG+AGG | - | chr7.3:49968643-49968662 | MS.gene051725:CDS | 55.0% | |
| ! | AGTGTTGGATCCTCCTGTGC+TGG | - | chr7.3:49966104-49966123 | MS.gene051725:intron | 55.0% |
| ! | GCACAAGAGTCTTTTGGCGG+GGG | - | chr7.3:49965800-49965819 | MS.gene051725:intron | 55.0% |
| ! | GGCAGAGGGCATGGAAACTA+TGG | - | chr7.3:49968607-49968626 | MS.gene051725:CDS | 55.0% |
| !! | CATACAACATCAGGTGCCGG+AGG | + | chr7.3:49964800-49964819 | None:intergenic | 55.0% |
| !! | CGGGGAGGTTTTTCTAGTCG+TGG | - | chr7.3:49968844-49968863 | MS.gene051725:intron | 55.0% |
| CTCGGTCGTCCTGAACCAGA+TGG | - | chr7.3:49965170-49965189 | MS.gene051725:intron | 60.0% | |
| GATGAGGGAGCAAGAGGGCA+TGG | - | chr7.3:49968649-49968668 | MS.gene051725:CDS | 60.0% | |
| GGCCGCATGAATCGTACTGG+CGG | - | chr7.3:49968907-49968926 | MS.gene051725:intron | 60.0% | |
| TGGCGGGGGAGTCATTGTCT+TGG | - | chr7.3:49965814-49965833 | MS.gene051725:intron | 60.0% | |
| ! | GCCGCATGAATCGTACTGGC+GGG | - | chr7.3:49968908-49968927 | MS.gene051725:intron | 60.0% |
| AGAGGCCGGAACACGAGCAG+TGG | + | chr7.3:49968962-49968981 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 49964773 | 49968987 | 49964773 | ID=MS.gene051725 |
| chr7.3 | mRNA | 49964773 | 49968987 | 49964773 | ID=MS.gene051725.t1;Parent=MS.gene051725 |
| chr7.3 | exon | 49968946 | 49968987 | 49968946 | ID=MS.gene051725.t1.exon1;Parent=MS.gene051725.t1 |
| chr7.3 | CDS | 49968946 | 49968987 | 49968946 | ID=cds.MS.gene051725.t1;Parent=MS.gene051725.t1 |
| chr7.3 | exon | 49968540 | 49968677 | 49968540 | ID=MS.gene051725.t1.exon2;Parent=MS.gene051725.t1 |
| chr7.3 | CDS | 49968540 | 49968677 | 49968540 | ID=cds.MS.gene051725.t1;Parent=MS.gene051725.t1 |
| chr7.3 | exon | 49967750 | 49968026 | 49967750 | ID=MS.gene051725.t1.exon3;Parent=MS.gene051725.t1 |
| chr7.3 | CDS | 49967750 | 49968026 | 49967750 | ID=cds.MS.gene051725.t1;Parent=MS.gene051725.t1 |
| chr7.3 | exon | 49967383 | 49967654 | 49967383 | ID=MS.gene051725.t1.exon4;Parent=MS.gene051725.t1 |
| chr7.3 | CDS | 49967383 | 49967654 | 49967383 | ID=cds.MS.gene051725.t1;Parent=MS.gene051725.t1 |
| chr7.3 | exon | 49966984 | 49967161 | 49966984 | ID=MS.gene051725.t1.exon5;Parent=MS.gene051725.t1 |
| chr7.3 | CDS | 49966984 | 49967161 | 49966984 | ID=cds.MS.gene051725.t1;Parent=MS.gene051725.t1 |
| chr7.3 | exon | 49966737 | 49966858 | 49966737 | ID=MS.gene051725.t1.exon6;Parent=MS.gene051725.t1 |
| chr7.3 | CDS | 49966737 | 49966858 | 49966737 | ID=cds.MS.gene051725.t1;Parent=MS.gene051725.t1 |
| chr7.3 | exon | 49966587 | 49966646 | 49966587 | ID=MS.gene051725.t1.exon7;Parent=MS.gene051725.t1 |
| chr7.3 | CDS | 49966587 | 49966646 | 49966587 | ID=cds.MS.gene051725.t1;Parent=MS.gene051725.t1 |
| chr7.3 | exon | 49964773 | 49965186 | 49964773 | ID=MS.gene051725.t1.exon8;Parent=MS.gene051725.t1 |
| chr7.3 | CDS | 49964773 | 49965186 | 49964773 | ID=cds.MS.gene051725.t1;Parent=MS.gene051725.t1 |
| Gene Sequence |
| Protein sequence |
