Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051901.t1 | XP_013450272.2 | 94.7 | 513 | 25 | 2 | 1 | 512 | 1 | 512 | 9.60E-275 | 955.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051901.t1 | Q67XX3 | 74.9 | 446 | 108 | 4 | 65 | 508 | 49 | 492 | 1.7e-203 | 710.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051901.t1 | A0A396HD35 | 94.7 | 513 | 25 | 2 | 1 | 512 | 1 | 512 | 6.9e-275 | 955.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051901.t1 | TR | Jumonji |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07123 | MS.gene051901 | PPI |
| MS.gene057156 | MS.gene051901 | PPI |
| MS.gene033347 | MS.gene051901 | PPI |
| MS.gene06965 | MS.gene051901 | PPI |
| MS.gene011389 | MS.gene051901 | PPI |
| MS.gene22992 | MS.gene051901 | PPI |
| MS.gene065461 | MS.gene051901 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051901.t1 | MTR_7g106990 | 95.937 | 443 | 16 | 2 | 1 | 442 | 1 | 442 | 0.0 | 833 |
| MS.gene051901.t1 | MTR_3g099370 | 35.650 | 446 | 266 | 10 | 90 | 521 | 13 | 451 | 3.92e-73 | 251 |
| MS.gene051901.t1 | MTR_7g106970 | 83.908 | 87 | 11 | 1 | 427 | 513 | 13 | 96 | 6.70e-41 | 143 |
| MS.gene051901.t1 | MTR_3g077420 | 27.645 | 293 | 149 | 11 | 211 | 449 | 18 | 301 | 1.12e-15 | 78.6 |
| MS.gene051901.t1 | MTR_3g077420 | 27.703 | 296 | 151 | 11 | 211 | 452 | 18 | 304 | 1.59e-15 | 78.6 |
| MS.gene051901.t1 | MTR_3g077420 | 26.990 | 289 | 148 | 10 | 211 | 445 | 18 | 297 | 2.48e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051901.t1 | AT5G06550 | 74.610 | 449 | 110 | 4 | 63 | 509 | 47 | 493 | 0.0 | 694 |
| MS.gene051901.t1 | AT1G78280 | 39.402 | 368 | 210 | 8 | 87 | 445 | 5 | 368 | 3.30e-78 | 265 |
| MS.gene051901.t1 | AT5G63080 | 27.758 | 281 | 155 | 9 | 211 | 452 | 12 | 283 | 5.33e-18 | 87.4 |
Find 153 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGATTTGTTTGGTGTTT+TGG | 0.172983 | 7.1:+6152262 | MS.gene051901:CDS |
| TTCCAAGCTGAAGTTGAATT+TGG | 0.188370 | 7.1:-6152356 | None:intergenic |
| GATTATAGGTGGATTATTAT+TGG | 0.189791 | 7.1:+6152299 | MS.gene051901:CDS |
| ATGAAGCTTAAGGACTATTT+TGG | 0.203220 | 7.1:+6152131 | MS.gene051901:CDS |
| TCTACCTTTGTTGTTTCTAA+TGG | 0.205554 | 7.1:+6151801 | MS.gene051901:CDS |
| GAATTGGGATAGAGATTATT+TGG | 0.233632 | 7.1:+6152061 | MS.gene051901:CDS |
| GTTGATGGGTTTCAGTATAA+TGG | 0.244611 | 7.1:+6151768 | MS.gene051901:CDS |
| TGGAAGGGTGTATTGATAAT+TGG | 0.249263 | 7.1:+6152027 | MS.gene051901:CDS |
| TGGTAATAGTTTAGGGGTTT+TGG | 0.265190 | 7.1:+6151671 | MS.gene051901:CDS |
| TGTTAGGAAGAGAGGGATTT+CGG | 0.288689 | 7.1:+6151956 | MS.gene051901:CDS |
| GAGCTTGTTCTTGATATTCT+AGG | 0.289370 | 7.1:+6151639 | MS.gene051901:CDS |
| GGGTACCCTTTGTTTGATAT+CGG | 0.290302 | 7.1:+6151822 | MS.gene051901:CDS |
| AGAAGGAAAGTTTCCTTTGC+TGG | 0.297251 | 7.1:-6153820 | None:intergenic |
| CTACCTTTGTTGTTTCTAAT+GGG | 0.312871 | 7.1:+6151802 | MS.gene051901:CDS |
| ATTGGGATGCATTGAGGAAT+TGG | 0.321571 | 7.1:+6152045 | MS.gene051901:CDS |
| TAATGGAAGAAATGGGGTTT+TGG | 0.321890 | 7.1:-6151431 | None:intergenic |
| GGTGGTTGTGGTGGGGCTGA+TGG | 0.330454 | 7.1:+6154553 | MS.gene051901:CDS |
| GAAGAGAGGGATTTCGGTTG+AGG | 0.331066 | 7.1:+6151962 | MS.gene051901:CDS |
| TCATATTCCAAACCCAATTT+CGG | 0.340210 | 7.1:-6152221 | None:intergenic |
| GCAAAGGAAACTTTCCTTCT+GGG | 0.341277 | 7.1:+6153823 | MS.gene051901:CDS |
| TTTATGGTGCAACAAAGAAT+TGG | 0.346410 | 7.1:+6152507 | MS.gene051901:CDS |
| GATAATATTGTTAGGAAGAG+AGG | 0.347047 | 7.1:+6151948 | MS.gene051901:CDS |
| AACCATTCAATTATTGAAAC+AGG | 0.349564 | 7.1:-6152476 | None:intergenic |
| AGCAAAGGAAACTTTCCTTC+TGG | 0.361388 | 7.1:+6153822 | MS.gene051901:CDS |
| TTGATGGGTTTCAGTATAAT+GGG | 0.365569 | 7.1:+6151769 | MS.gene051901:CDS |
| AAAAGTTCCGAAATTGGGTT+TGG | 0.367524 | 7.1:+6152214 | MS.gene051901:CDS |
| AACGCAAGCACACTGGTATC+TGG | 0.370811 | 7.1:+6153692 | MS.gene051901:CDS |
| GCCCAGTGGTTGGTGGCATT+TGG | 0.374870 | 7.1:+6152580 | MS.gene051901:CDS |
| TGGAGAGGGATAATATTGTT+AGG | 0.381335 | 7.1:+6151940 | MS.gene051901:CDS |
| CACCCACGGTGTTCAGCCCT+TGG | 0.382559 | 7.1:+6151542 | MS.gene051901:CDS |
| TTGGGATGCATTGAGGAATT+GGG | 0.385650 | 7.1:+6152046 | MS.gene051901:CDS |
| TGATCAAGGGGTCGAAGAAA+TGG | 0.385678 | 7.1:+6152384 | MS.gene051901:CDS |
| ACCAGTGTCTCTGGAGTTGA+TGG | 0.391428 | 7.1:-6151589 | None:intergenic |
| GAGAAATTTGTTAAGTGTCT+TGG | 0.391444 | 7.1:+6153652 | MS.gene051901:CDS |
| GGAAGGGTGTATTGATAATT+GGG | 0.393852 | 7.1:+6152028 | MS.gene051901:CDS |
| ATTATTGGACCAGCTGGGTC+TGG | 0.396567 | 7.1:+6152314 | MS.gene051901:CDS |
| GCAGTGGTGGTGGTTGTGGT+GGG | 0.396644 | 7.1:+6154545 | MS.gene051901:CDS |
| GAAATGAGAGACCTGATTAT+AGG | 0.398403 | 7.1:+6152285 | MS.gene051901:CDS |
| GAACACCGTGGGTGTGTGAC+GGG | 0.400221 | 7.1:-6151533 | None:intergenic |
| TCACTAATCATGAACCCCTT+TGG | 0.406513 | 7.1:+6151721 | MS.gene051901:CDS |
| CGCAGTGGTGGTGGTTGTGG+TGG | 0.406520 | 7.1:+6154544 | MS.gene051901:CDS |
| GGTTAATAAGCCGGTGTTGT+TGG | 0.408373 | 7.1:+6152007 | MS.gene051901:CDS |
| GGGTTTGGAATATGAAGTTC+CGG | 0.409696 | 7.1:+6152229 | MS.gene051901:CDS |
| GTGGTTTGTGGTGGTAGATT+TGG | 0.411866 | 7.1:+6154585 | MS.gene051901:CDS |
| CTCCTGTTTCAATAATTGAA+TGG | 0.415829 | 7.1:+6152474 | MS.gene051901:CDS |
| ATAATAATCCACCTATAATC+AGG | 0.419067 | 7.1:-6152296 | None:intergenic |
| GCTAACATAGTTCTGTGTTA+TGG | 0.419792 | 7.1:-6152627 | None:intergenic |
| ATTACCTAAACCAGTGTCTC+TGG | 0.422088 | 7.1:-6151598 | None:intergenic |
| GATGCTACCTCTGCACCATC+AGG | 0.424520 | 7.1:-6152452 | None:intergenic |
| GGCAATCTCTATTTCAATCC+AGG | 0.425479 | 7.1:+6151564 | MS.gene051901:CDS |
| TTGATATCGGGAGTGGCGTT+CGG | 0.426068 | 7.1:+6151835 | MS.gene051901:CDS |
| AGCTTGGAATGCTGTGATCA+AGG | 0.428224 | 7.1:+6152370 | MS.gene051901:CDS |
| AGCTTGTTCTTGATATTCTA+GGG | 0.429419 | 7.1:+6151640 | MS.gene051901:CDS |
| AACTCCAGAGACACTGGTTT+AGG | 0.430834 | 7.1:+6151594 | MS.gene051901:CDS |
| TGGATTATTATTGGACCAGC+TGG | 0.431844 | 7.1:+6152308 | MS.gene051901:CDS |
| GCTTTACATATGCACTCAAT+TGG | 0.441061 | 7.1:-6152539 | None:intergenic |
| GGTACCCTTTGTTTGATATC+GGG | 0.441137 | 7.1:+6151823 | MS.gene051901:CDS |
| TGAACACCGTGGGTGTGTGA+CGG | 0.450073 | 7.1:-6151534 | None:intergenic |
| GGTAGATTTGGTTGGTTTCG+TGG | 0.455668 | 7.1:+6154597 | MS.gene051901:CDS |
| TGGTGGTTCGTGGTGGTTTG+TGG | 0.455810 | 7.1:+6154573 | MS.gene051901:CDS |
| GATTTCGGTTGAGGAGTTTG+TGG | 0.461360 | 7.1:+6151971 | MS.gene051901:CDS |
| ATCCAAATTCAACTTCAGCT+TGG | 0.469977 | 7.1:+6152354 | MS.gene051901:CDS |
| CACACTGGTATCTGGAACAA+AGG | 0.473108 | 7.1:+6153700 | MS.gene051901:CDS |
| GATACCAGTGTGCTTGCGTT+CGG | 0.473719 | 7.1:-6153689 | None:intergenic |
| GTGTCTTGGAGTTTCTTAAG+AGG | 0.477250 | 7.1:+6153666 | MS.gene051901:CDS |
| AATAAGCCGGTGTTGTTGGA+AGG | 0.481648 | 7.1:+6152011 | MS.gene051901:CDS |
| GGTTGTGGTGGGGCTGATGG+TGG | 0.485225 | 7.1:+6154556 | MS.gene051901:CDS |
| GCTCGCAGTGGTGGTGGTTG+TGG | 0.487692 | 7.1:+6154541 | MS.gene051901:CDS |
| GCTTGGAATGCTGTGATCAA+GGG | 0.490367 | 7.1:+6152371 | MS.gene051901:CDS |
| CACCAAATGCCACCAACCAC+TGG | 0.491804 | 7.1:-6152582 | None:intergenic |
| CCTTTGTTTGATATCGGGAG+TGG | 0.492650 | 7.1:+6151828 | MS.gene051901:CDS |
| TTTGATGTCGAAACATTCTT+CGG | 0.495045 | 7.1:-6151502 | None:intergenic |
| GTGGGGCTGATGGTGGTTCG+TGG | 0.498175 | 7.1:+6154563 | MS.gene051901:CDS |
| TGAAAGGTGAATGGTTGGAG+AGG | 0.498202 | 7.1:+6151925 | MS.gene051901:CDS |
| ACCCACGGTGTTCAGCCCTT+GGG | 0.502505 | 7.1:+6151543 | MS.gene051901:CDS |
| GCCTGTGGAGATGAAGCTTA+AGG | 0.506931 | 7.1:+6152121 | MS.gene051901:CDS |
| GTGGATCTCGTGAAGGTTTG+TGG | 0.508210 | 7.1:+6154619 | MS.gene051901:CDS |
| GATCAAGGGGTCGAAGAAAT+GGG | 0.508230 | 7.1:+6152385 | MS.gene051901:CDS |
| CAGATCAAGTTAGAGAAGAA+AGG | 0.508713 | 7.1:+6152159 | MS.gene051901:CDS |
| TCTCTGGAGTTGATGGAACC+TGG | 0.509296 | 7.1:-6151582 | None:intergenic |
| CCTTTGGAGGAATCTTGTGT+TGG | 0.509661 | 7.1:+6151737 | MS.gene051901:CDS |
| CTAATCATGAACCCCTTTGG+AGG | 0.514583 | 7.1:+6151724 | MS.gene051901:CDS |
| CAACACAAGATTCCTCCAAA+GGG | 0.515604 | 7.1:-6151736 | None:intergenic |
| GTCAGTTCATCAATTGCTCC+AGG | 0.519066 | 7.1:-6153773 | None:intergenic |
| ATTGAGTGCATATGTAAAGC+GGG | 0.520028 | 7.1:+6152542 | MS.gene051901:CDS |
| TCCTTAAGCTTCATCTCCAC+AGG | 0.521980 | 7.1:-6152122 | None:intergenic |
| ATAATATTGTTAGGAAGAGA+GGG | 0.523338 | 7.1:+6151949 | MS.gene051901:CDS |
| TTATCTTTGTGCCCAGTGGT+TGG | 0.523418 | 7.1:+6152570 | MS.gene051901:CDS |
| TCTTTGTGCCCAGTGGTTGG+TGG | 0.525495 | 7.1:+6152573 | MS.gene051901:CDS |
| ACCTCTGCACCATCAGGGCT+AGG | 0.527425 | 7.1:-6152446 | None:intergenic |
| TAAGTTTAAGAATGCTATTG+AGG | 0.530123 | 7.1:+6153742 | MS.gene051901:CDS |
| TTATGGCAATTGATTCCTCC+AGG | 0.530459 | 7.1:-6152610 | None:intergenic |
| CACTCCCGATATCAAACAAA+GGG | 0.531337 | 7.1:-6151827 | None:intergenic |
| GTGGCATTTGGTGATCAACC+TGG | 0.533188 | 7.1:+6152592 | MS.gene051901:CDS |
| TAACACAGAACTATGTTAGC+AGG | 0.539722 | 7.1:+6152630 | MS.gene051901:CDS |
| GTAGCTGCTCGCAGTGGTGG+TGG | 0.542218 | 7.1:+6154535 | MS.gene051901:CDS |
| TTTGTGGTGGTAGATTTGGT+TGG | 0.543033 | 7.1:+6154589 | MS.gene051901:CDS |
| TGAAATGAAAGGTGAATGGT+TGG | 0.544161 | 7.1:+6151920 | MS.gene051901:CDS |
| GGTGTTCATCCTAGCCCTGA+TGG | 0.546334 | 7.1:+6152437 | MS.gene051901:CDS |
| CCTCCCGATGTTATTCCGCC+CGG | 0.551681 | 7.1:+6152416 | MS.gene051901:CDS |
| TGGTTCGTGGTGGTTTGTGG+TGG | 0.552934 | 7.1:+6154576 | MS.gene051901:CDS |
| TCCATCAACTCCAGAGACAC+TGG | 0.557132 | 7.1:+6151588 | MS.gene051901:CDS |
| GGTTTCAGTATAATGGGTCA+TGG | 0.560008 | 7.1:+6151775 | MS.gene051901:CDS |
| TTTCGTGGTGGATCTCGTGA+AGG | 0.561238 | 7.1:+6154612 | MS.gene051901:CDS |
| ACCAAATGCCACCAACCACT+GGG | 0.564265 | 7.1:-6152581 | None:intergenic |
| CTTCTTCAACGAGAGATGAG+TGG | 0.567416 | 7.1:-6151461 | None:intergenic |
| GGGCTGATGGTGGTTCGTGG+TGG | 0.568874 | 7.1:+6154566 | MS.gene051901:CDS |
| GATTATTTGGTTAAGTTGTG+TGG | 0.571733 | 7.1:+6152074 | MS.gene051901:CDS |
| TTGATAATTGGGATGCATTG+AGG | 0.572075 | 7.1:+6152039 | MS.gene051901:CDS |
| GAAAGGTGAATGGTTGGAGA+GGG | 0.572473 | 7.1:+6151926 | MS.gene051901:CDS |
| CAGTGGTGGTGGTTGTGGTG+GGG | 0.578042 | 7.1:+6154546 | MS.gene051901:CDS |
| ATAAGCCGGTGTTGTTGGAA+GGG | 0.582277 | 7.1:+6152012 | MS.gene051901:CDS |
| GTTGTAGCTGCTCGCAGTGG+TGG | 0.582638 | 7.1:+6154532 | MS.gene051901:CDS |
| CCAACACAAGATTCCTCCAA+AGG | 0.589735 | 7.1:-6151737 | None:intergenic |
| ATCTTGAAATGAAAGGTGAA+TGG | 0.590130 | 7.1:+6151916 | MS.gene051901:CDS |
| ACACCGGGCGGAATAACATC+GGG | 0.595142 | 7.1:-6152419 | None:intergenic |
| ATCAGGGCTAGGATGAACAC+CGG | 0.595347 | 7.1:-6152435 | None:intergenic |
| AAGAACAAGCTCATCAGTGA+GGG | 0.597323 | 7.1:-6151628 | None:intergenic |
| GCCCAAGGGCTGAACACCGT+GGG | 0.602240 | 7.1:-6151544 | None:intergenic |
| ATGAGAGACCTGATTATAGG+TGG | 0.603392 | 7.1:+6152288 | MS.gene051901:CDS |
| TCCTAGCCCTGATGGTGCAG+AGG | 0.603932 | 7.1:+6152445 | MS.gene051901:CDS |
| GAGGTTATCTTTGTGCCCAG+TGG | 0.605601 | 7.1:+6152566 | MS.gene051901:CDS |
| GGATTATTATTGGACCAGCT+GGG | 0.609112 | 7.1:+6152309 | MS.gene051901:CDS |
| AACACCGGGCGGAATAACAT+CGG | 0.610276 | 7.1:-6152420 | None:intergenic |
| TTTAGATGGTAATAGTTTAG+GGG | 0.614858 | 7.1:+6151665 | MS.gene051901:CDS |
| TGTGCTAATCTTGAAATGAA+AGG | 0.615147 | 7.1:+6151909 | MS.gene051901:CDS |
| CTTGGAATGCTGTGATCAAG+GGG | 0.619460 | 7.1:+6152372 | MS.gene051901:CDS |
| AAAGACGATCCAGACCCAGC+TGG | 0.622160 | 7.1:-6152323 | None:intergenic |
| TCTGCCCCGTCACACACCCA+CGG | 0.625768 | 7.1:+6151528 | MS.gene051901:CDS |
| AACACCGTGGGTGTGTGACG+GGG | 0.625830 | 7.1:-6151532 | None:intergenic |
| TTTGGATCAAACAGATACAA+CGG | 0.630505 | 7.1:-6152182 | None:intergenic |
| CCACTCCCGATATCAAACAA+AGG | 0.643905 | 7.1:-6151828 | None:intergenic |
| AGATTTGGTTGGTTTCGTGG+TGG | 0.644257 | 7.1:+6154600 | MS.gene051901:CDS |
| ATGCTACCTCTGCACCATCA+GGG | 0.644492 | 7.1:-6152451 | None:intergenic |
| TTGAGTGCATATGTAAAGCG+GGG | 0.644930 | 7.1:+6152543 | MS.gene051901:CDS |
| AATTGAGTGCATATGTAAAG+CGG | 0.648535 | 7.1:+6152541 | MS.gene051901:CDS |
| GAGGCCGAACGCAAGCACAC+TGG | 0.652835 | 7.1:+6153685 | MS.gene051901:CDS |
| GTCTGCAACAGAATCCCAGA+AGG | 0.653217 | 7.1:-6153837 | None:intergenic |
| CAAGAACAAGCTCATCAGTG+AGG | 0.659400 | 7.1:-6151629 | None:intergenic |
| TTGAAATAGAGATTGCCCAA+GGG | 0.664210 | 7.1:-6151558 | None:intergenic |
| AAATCCTCCCGAAAATACAC+CGG | 0.666892 | 7.1:-6152248 | None:intergenic |
| TCAGGGCTAGGATGAACACC+GGG | 0.669209 | 7.1:-6152434 | None:intergenic |
| ATACACCCTTCCAACAACAC+CGG | 0.670300 | 7.1:-6152017 | None:intergenic |
| CCGGGCGGAATAACATCGGG+AGG | 0.670441 | 7.1:-6152416 | None:intergenic |
| TGCCCAAGGGCTGAACACCG+TGG | 0.670914 | 7.1:-6151545 | None:intergenic |
| GATCTCGTGAAGGTTTGTGG+TGG | 0.678866 | 7.1:+6154622 | MS.gene051901:CDS |
| ATTGAAATAGAGATTGCCCA+AGG | 0.684435 | 7.1:-6151559 | None:intergenic |
| GTGGTTGTAGCTGCTCGCAG+TGG | 0.689408 | 7.1:+6154529 | MS.gene051901:CDS |
| GTACCCATTAGAAACAACAA+AGG | 0.698809 | 7.1:-6151805 | None:intergenic |
| AACACAAGATTCCTCCAAAG+GGG | 0.706242 | 7.1:-6151735 | None:intergenic |
| TGAGTGCATATGTAAAGCGG+GGG | 0.706771 | 7.1:+6152544 | MS.gene051901:CDS |
| GCATTTGGTGATCAACCTGG+AGG | 0.725951 | 7.1:+6152595 | MS.gene051901:CDS |
| GGGCTAGGATGAACACCGGG+CGG | 0.735361 | 7.1:-6152431 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATTTGAAAATTTAAT+CGG | + | chr7.1:6152903-6152922 | MS.gene051901:intron | 10.0% |
| !! | TATTCATTTCAAAATATAAA+GGG | - | chr7.1:6153042-6153061 | None:intergenic | 10.0% |
| !!! | TTATTATTTTTTATTTCATG+TGG | + | chr7.1:6153552-6153571 | MS.gene051901:intron | 10.0% |
| !! | AAATCAATTTCAATCAAAAA+AGG | - | chr7.1:6154171-6154190 | None:intergenic | 15.0% |
| !! | GTATTCATTTCAAAATATAA+AGG | - | chr7.1:6153043-6153062 | None:intergenic | 15.0% |
| !! | TATAATTAATTGATGTTGTT+TGG | + | chr7.1:6154252-6154271 | MS.gene051901:intron | 15.0% |
| !! | TATGTATGAATTTCTTTAAA+AGG | - | chr7.1:6153888-6153907 | None:intergenic | 15.0% |
| !!! | GAATGTTTATTGTTTTAATT+CGG | + | chr7.1:6152825-6152844 | MS.gene051901:intron | 15.0% |
| !!! | TTTTTGATTGAAATTGATTT+TGG | + | chr7.1:6154171-6154190 | MS.gene051901:intron | 15.0% |
| !!! | ATATTTTGAAATGAATACGA+GGG | + | chr7.1:6153045-6153064 | MS.gene051901:intron | 20.0% |
| !!! | CTTAGTACTTTTAGATTAAT+AGG | + | chr7.1:6152671-6152690 | MS.gene051901:intron | 20.0% |
| !!! | GTCATTTTTTACATGTTAAT+AGG | + | chr7.1:6152795-6152814 | MS.gene051901:intron | 20.0% |
| !!! | TAAAGTTAGAGACTTTTATT+CGG | + | chr7.1:6151863-6151882 | MS.gene051901:CDS | 20.0% |
| !!! | TATATTTTGAAATGAATACG+AGG | + | chr7.1:6153044-6153063 | MS.gene051901:intron | 20.0% |
| !!! | TTGCTATTTTGAATACTTAT+TGG | + | chr7.1:6153481-6153500 | MS.gene051901:intron | 20.0% |
| !!! | TTTTAGATGGTAATAGTTTA+GGG | + | chr7.1:6151664-6151683 | MS.gene051901:CDS | 20.0% |
| !!! | TTTTTAGATGGTAATAGTTT+AGG | + | chr7.1:6151663-6151682 | MS.gene051901:CDS | 20.0% |
| !!! | TTTTTAGTAATGGAAGAAAT+GGG | - | chr7.1:6151441-6151460 | None:intergenic | 20.0% |
| ! | AACCATTCAATTATTGAAAC+AGG | - | chr7.1:6152479-6152498 | None:intergenic | 25.0% |
| ! | ACTACTTAACAGACAAAAAA+AGG | - | chr7.1:6152777-6152796 | None:intergenic | 25.0% |
| ! | ATAATAATCCACCTATAATC+AGG | - | chr7.1:6152299-6152318 | None:intergenic | 25.0% |
| ! | ATAATATTGTTAGGAAGAGA+GGG | + | chr7.1:6151949-6151968 | MS.gene051901:CDS | 25.0% |
| ! | GGAGTCATTATAATTAGAAA+TGG | + | chr7.1:6152924-6152943 | MS.gene051901:intron | 25.0% |
| ! | TAAGTTTAAGAATGCTATTG+AGG | + | chr7.1:6153742-6153761 | MS.gene051901:CDS | 25.0% |
| ! | TTTAGATGGTAATAGTTTAG+GGG | + | chr7.1:6151665-6151684 | MS.gene051901:CDS | 25.0% |
| !! | ATTTTCAAATATGTAGTCCA+AGG | - | chr7.1:6152898-6152917 | None:intergenic | 25.0% |
| !! | CTTTTTCTCTTCTTCTTTTT+GGG | - | chr7.1:6153798-6153817 | None:intergenic | 25.0% |
| !! | TCTTTTTCTCTTCTTCTTTT+TGG | - | chr7.1:6153799-6153818 | None:intergenic | 25.0% |
| !!! | CTTTTGGTTTTGTATTTTGT+TGG | + | chr7.1:6153583-6153602 | MS.gene051901:intron | 25.0% |
| !!! | GATTATAGGTGGATTATTAT+TGG | + | chr7.1:6152299-6152318 | MS.gene051901:CDS | 25.0% |
| !!! | GTTTTTAGTAATGGAAGAAA+TGG | - | chr7.1:6151442-6151461 | None:intergenic | 25.0% |
| !!! | GTTTTTGTTTCGGTTTTTTT+TGG | - | chr7.1:6151394-6151413 | None:intergenic | 25.0% |
| !!! | TCTTTGTTCTTGTTTTGATA+CGG | - | chr7.1:6151362-6151381 | None:intergenic | 25.0% |
| !!! | TGTTGTACTCTATTTTTTAG+AGG | + | chr7.1:6153988-6154007 | MS.gene051901:intron | 25.0% |
| !!! | TTATTGATTCACAATAGCAT+GGG | + | chr7.1:6152966-6152985 | MS.gene051901:intron | 25.0% |
| !!! | TTTTAGTAATGGAAGAAATG+GGG | - | chr7.1:6151440-6151459 | None:intergenic | 25.0% |
| AAAAAAGGACACATCAAATC+AGG | - | chr7.1:6152762-6152781 | None:intergenic | 30.0% | |
| AAGTTACTGATCCAAATTTG+CGG | + | chr7.1:6153921-6153940 | MS.gene051901:intron | 30.0% | |
| AATCATTAGCCGATCATATT+TGG | - | chr7.1:6153379-6153398 | None:intergenic | 30.0% | |
| AATTAGAAATGGTCAGTACA+TGG | + | chr7.1:6152935-6152954 | MS.gene051901:intron | 30.0% | |
| AATTGAGTGCATATGTAAAG+CGG | + | chr7.1:6152541-6152560 | MS.gene051901:CDS | 30.0% | |
| AGAGAAAAAAACTTTCCATC+AGG | - | chr7.1:6153196-6153215 | None:intergenic | 30.0% | |
| ATCTTGAAATGAAAGGTGAA+TGG | + | chr7.1:6151916-6151935 | MS.gene051901:CDS | 30.0% | |
| CTCCTGTTTCAATAATTGAA+TGG | + | chr7.1:6152474-6152493 | MS.gene051901:CDS | 30.0% | |
| GAAAACATTGAAGCAATCAA+AGG | - | chr7.1:6154061-6154080 | None:intergenic | 30.0% | |
| GAATTGGGATAGAGATTATT+TGG | + | chr7.1:6152061-6152080 | MS.gene051901:CDS | 30.0% | |
| GATAATATTGTTAGGAAGAG+AGG | + | chr7.1:6151948-6151967 | MS.gene051901:CDS | 30.0% | |
| TCATATTCCAAACCCAATTT+CGG | - | chr7.1:6152224-6152243 | None:intergenic | 30.0% | |
| TGAATACTTATTGGAATCCA+TGG | + | chr7.1:6153490-6153509 | MS.gene051901:intron | 30.0% | |
| TGTGCTAATCTTGAAATGAA+AGG | + | chr7.1:6151909-6151928 | MS.gene051901:CDS | 30.0% | |
| TTTATGGTGCAACAAAGAAT+TGG | + | chr7.1:6152507-6152526 | MS.gene051901:CDS | 30.0% | |
| TTTCTCATTTAGTGCATGTT+TGG | + | chr7.1:6153239-6153258 | MS.gene051901:intron | 30.0% | |
| TTTGATGTCGAAACATTCTT+CGG | - | chr7.1:6151505-6151524 | None:intergenic | 30.0% | |
| TTTGGATCAAACAGATACAA+CGG | - | chr7.1:6152185-6152204 | None:intergenic | 30.0% | |
| ! | ACAATGACAACGTGATTTTA+TGG | + | chr7.1:6153286-6153305 | MS.gene051901:intron | 30.0% |
| ! | AGCTTGTTCTTGATATTCTA+GGG | + | chr7.1:6151640-6151659 | MS.gene051901:CDS | 30.0% |
| ! | ATGAAGCTTAAGGACTATTT+TGG | + | chr7.1:6152131-6152150 | MS.gene051901:CDS | 30.0% |
| ! | ATGATGTTAAGTTTTCGGTT+GGG | + | chr7.1:6152099-6152118 | MS.gene051901:CDS | 30.0% |
| ! | ATTTTGGATTAAAGCGAGAT+AGG | + | chr7.1:6154187-6154206 | MS.gene051901:intron | 30.0% |
| ! | GAATGGTTCATGAACTTTTA+TGG | + | chr7.1:6152491-6152510 | MS.gene051901:CDS | 30.0% |
| ! | GATTATTTGGTTAAGTTGTG+TGG | + | chr7.1:6152074-6152093 | MS.gene051901:CDS | 30.0% |
| ! | TCATGTGGTTTGAATTCTTT+TGG | + | chr7.1:6153567-6153586 | MS.gene051901:intron | 30.0% |
| ! | TGTTGGAGAATTTTGTTGAT+GGG | + | chr7.1:6151754-6151773 | MS.gene051901:CDS | 30.0% |
| ! | TGTTTTCACTAGCTAAGAAA+TGG | + | chr7.1:6154074-6154093 | MS.gene051901:intron | 30.0% |
| !! | CTACCTTTGTTGTTTCTAAT+GGG | + | chr7.1:6151802-6151821 | MS.gene051901:CDS | 30.0% |
| !! | CTTATTGATTCACAATAGCA+TGG | + | chr7.1:6152965-6152984 | MS.gene051901:intron | 30.0% |
| !! | GAGAAATTTGTTAAGTGTCT+TGG | + | chr7.1:6153652-6153671 | MS.gene051901:CDS | 30.0% |
| !! | TCTACCTTTGTTGTTTCTAA+TGG | + | chr7.1:6151801-6151820 | MS.gene051901:CDS | 30.0% |
| !! | TGGTGATGATGTTAAGTTTT+CGG | + | chr7.1:6152094-6152113 | MS.gene051901:CDS | 30.0% |
| !! | TTGATGGGTTTCAGTATAAT+GGG | + | chr7.1:6151769-6151788 | MS.gene051901:CDS | 30.0% |
| !!! | AGATGAGTGGTTTTTAGTAA+TGG | - | chr7.1:6151451-6151470 | None:intergenic | 30.0% |
| !!! | CTTTGTTCTTGTTTTGATAC+GGG | - | chr7.1:6151361-6151380 | None:intergenic | 30.0% |
| !!! | GATATTCTAGGGTTTTTAGA+TGG | + | chr7.1:6151651-6151670 | MS.gene051901:CDS | 30.0% |
| !!! | GGAACTTTTTCAGCAAATTT+TGG | - | chr7.1:6152203-6152222 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTGAGTTTGTGA+GGG | - | chr7.1:6151416-6151435 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTTTGAGTTTGTG+AGG | - | chr7.1:6151417-6151436 | None:intergenic | 30.0% |
| AAAAGTTCCGAAATTGGGTT+TGG | + | chr7.1:6152214-6152233 | MS.gene051901:CDS | 35.0% | |
| AAGAGAAAAAGATCCAGCAA+AGG | + | chr7.1:6153807-6153826 | MS.gene051901:CDS | 35.0% | |
| ACATTTAGAAGAAGAGGAGT+TGG | - | chr7.1:6154418-6154437 | None:intergenic | 35.0% | |
| ACTGCCAATCCAAATATGAT+CGG | + | chr7.1:6153367-6153386 | MS.gene051901:intron | 35.0% | |
| ACTTATTGGAATCCATGGAA+CGG | + | chr7.1:6153495-6153514 | MS.gene051901:intron | 35.0% | |
| ACTTTAACCTCAAACGTTAG+CGG | + | chr7.1:6153617-6153636 | MS.gene051901:intron | 35.0% | |
| AGGATTATGTGATTCCTAGA+AGG | - | chr7.1:6153176-6153195 | None:intergenic | 35.0% | |
| ATCATATCACATGCGCTTAT+CGG | - | chr7.1:6153429-6153448 | None:intergenic | 35.0% | |
| ATCCAAATTCAACTTCAGCT+TGG | + | chr7.1:6152354-6152373 | MS.gene051901:CDS | 35.0% | |
| ATTGAAATAGAGATTGCCCA+AGG | - | chr7.1:6151562-6151581 | None:intergenic | 35.0% | |
| ATTGAGTGCATATGTAAAGC+GGG | + | chr7.1:6152542-6152561 | MS.gene051901:CDS | 35.0% | |
| CAAAGGAACACTAGACTTTA+GGG | - | chr7.1:6154044-6154063 | None:intergenic | 35.0% | |
| CAGAAATCCAATTGCATATG+TGG | + | chr7.1:6154017-6154036 | MS.gene051901:intron | 35.0% | |
| CAGATCAAGTTAGAGAAGAA+AGG | + | chr7.1:6152159-6152178 | MS.gene051901:CDS | 35.0% | |
| GAAATGAGAGACCTGATTAT+AGG | + | chr7.1:6152285-6152304 | MS.gene051901:CDS | 35.0% | |
| GAAATTCATTGAAGCTGCAA+TGG | - | chr7.1:6153020-6153039 | None:intergenic | 35.0% | |
| GATTATGTGATTCCTAGAAG+GGG | - | chr7.1:6153174-6153193 | None:intergenic | 35.0% | |
| GCTGAAAAAGTTCCGAAATT+GGG | + | chr7.1:6152209-6152228 | MS.gene051901:CDS | 35.0% | |
| GCTTTACATATGCACTCAAT+TGG | - | chr7.1:6152542-6152561 | None:intergenic | 35.0% | |
| GGATCTACATTTAGAAGAAG+AGG | - | chr7.1:6154424-6154443 | None:intergenic | 35.0% | |
| GGATTATGTGATTCCTAGAA+GGG | - | chr7.1:6153175-6153194 | None:intergenic | 35.0% | |
| GTACCCATTAGAAACAACAA+AGG | - | chr7.1:6151808-6151827 | None:intergenic | 35.0% | |
| GTTTAGTGACCTTGAGATAT+TGG | + | chr7.1:6153125-6153144 | MS.gene051901:intron | 35.0% | |
| TAACACAGAACTATGTTAGC+AGG | + | chr7.1:6152630-6152649 | MS.gene051901:CDS | 35.0% | |
| TAGGAATCACATAATCCTGA+TGG | + | chr7.1:6153178-6153197 | MS.gene051901:intron | 35.0% | |
| TCAAAGGAACACTAGACTTT+AGG | - | chr7.1:6154045-6154064 | None:intergenic | 35.0% | |
| TCTATAATCAGCCGCAAATT+TGG | - | chr7.1:6153935-6153954 | None:intergenic | 35.0% | |
| TGAAATGAAAGGTGAATGGT+TGG | + | chr7.1:6151920-6151939 | MS.gene051901:CDS | 35.0% | |
| TGCTGAAAAAGTTCCGAAAT+TGG | + | chr7.1:6152208-6152227 | MS.gene051901:CDS | 35.0% | |
| TGGAGAGGGATAATATTGTT+AGG | + | chr7.1:6151940-6151959 | MS.gene051901:CDS | 35.0% | |
| TTAGCCGATCATATTTGGAT+TGG | - | chr7.1:6153374-6153393 | None:intergenic | 35.0% | |
| TTCCAAGCTGAAGTTGAATT+TGG | - | chr7.1:6152359-6152378 | None:intergenic | 35.0% | |
| TTGAAATAGAGATTGCCCAA+GGG | - | chr7.1:6151561-6151580 | None:intergenic | 35.0% | |
| ! | ATGAAGTTCCGGTGTATTTT+CGG | + | chr7.1:6152240-6152259 | MS.gene051901:CDS | 35.0% |
| ! | GAGCTTGTTCTTGATATTCT+AGG | + | chr7.1:6151639-6151658 | MS.gene051901:CDS | 35.0% |
| ! | GATGATGTTAAGTTTTCGGT+TGG | + | chr7.1:6152098-6152117 | MS.gene051901:CDS | 35.0% |
| ! | GCTAACATAGTTCTGTGTTA+TGG | - | chr7.1:6152630-6152649 | None:intergenic | 35.0% |
| ! | GGAAGGGTGTATTGATAATT+GGG | + | chr7.1:6152028-6152047 | MS.gene051901:CDS | 35.0% |
| ! | GTGTTGGAGAATTTTGTTGA+TGG | + | chr7.1:6151753-6151772 | MS.gene051901:CDS | 35.0% |
| ! | TAATGGAAGAAATGGGGTTT+TGG | - | chr7.1:6151434-6151453 | None:intergenic | 35.0% |
| ! | TGGAAGGGTGTATTGATAAT+TGG | + | chr7.1:6152027-6152046 | MS.gene051901:CDS | 35.0% |
| ! | TGGTAATAGTTTAGGGGTTT+TGG | + | chr7.1:6151671-6151690 | MS.gene051901:CDS | 35.0% |
| ! | TTGATAATTGGGATGCATTG+AGG | + | chr7.1:6152039-6152058 | MS.gene051901:CDS | 35.0% |
| ! | TTTTAGCAAAAGCTGCACTT+TGG | - | chr7.1:6153317-6153336 | None:intergenic | 35.0% |
| !! | ATTTGGATTGGCAGTGAATT+CGG | - | chr7.1:6153362-6153381 | None:intergenic | 35.0% |
| !! | GTTGATGGGTTTCAGTATAA+TGG | + | chr7.1:6151768-6151787 | MS.gene051901:CDS | 35.0% |
| !! | GTTTGTGAGGGTTTTTGTTT+CGG | - | chr7.1:6151404-6151423 | None:intergenic | 35.0% |
| !! | TATTTTCGGGAGGATTTGTT+TGG | + | chr7.1:6152254-6152273 | MS.gene051901:CDS | 35.0% |
| !! | TTTTGAGGAGGTTAATAAGC+CGG | + | chr7.1:6151998-6152017 | MS.gene051901:CDS | 35.0% |
| !!! | CGGATTATCTTTTTCAGAGT+TGG | + | chr7.1:6151883-6151902 | MS.gene051901:CDS | 35.0% |
| !!! | GAGGATTTGTTTGGTGTTTT+GGG | + | chr7.1:6152263-6152282 | MS.gene051901:CDS | 35.0% |
| !!! | GTGTTGTGTTTTTAGAGAGA+GGG | - | chr7.1:6154375-6154394 | None:intergenic | 35.0% |
| !!! | TGTGTTGTGTTTTTAGAGAG+AGG | - | chr7.1:6154376-6154395 | None:intergenic | 35.0% |
| !!! | TTTTGAAATGAATACGAGGG+AGG | + | chr7.1:6153048-6153067 | MS.gene051901:intron | 35.0% |
| AAATCCTCCCGAAAATACAC+CGG | - | chr7.1:6152251-6152270 | None:intergenic | 40.0% | |
| AACACAAGATTCCTCCAAAG+GGG | - | chr7.1:6151738-6151757 | None:intergenic | 40.0% | |
| AAGAACAAGCTCATCAGTGA+GGG | - | chr7.1:6151631-6151650 | None:intergenic | 40.0% | |
| AAGAAGAGGAGTTGGATTTG+AGG | - | chr7.1:6154410-6154429 | None:intergenic | 40.0% | |
| AATATAACGAGTCCGTTCCA+TGG | - | chr7.1:6153510-6153529 | None:intergenic | 40.0% | |
| AGAAGAGGAGTTGGATTTGA+GGG | - | chr7.1:6154409-6154428 | None:intergenic | 40.0% | |
| AGAAGGAAAGTTTCCTTTGC+TGG | - | chr7.1:6153823-6153842 | None:intergenic | 40.0% | |
| AGCAAAGGAAACTTTCCTTC+TGG | + | chr7.1:6153822-6153841 | MS.gene051901:CDS | 40.0% | |
| ATCAGTGAGCTATTGTACCT+AGG | - | chr7.1:6153097-6153116 | None:intergenic | 40.0% | |
| ATGAGAGACCTGATTATAGG+TGG | + | chr7.1:6152288-6152307 | MS.gene051901:CDS | 40.0% | |
| ATTACCTAAACCAGTGTCTC+TGG | - | chr7.1:6151601-6151620 | None:intergenic | 40.0% | |
| ATTGGGATGCATTGAGGAAT+TGG | + | chr7.1:6152045-6152064 | MS.gene051901:CDS | 40.0% | |
| CAACACAAGATTCCTCCAAA+GGG | - | chr7.1:6151739-6151758 | None:intergenic | 40.0% | |
| CACTCCCGATATCAAACAAA+GGG | - | chr7.1:6151830-6151849 | None:intergenic | 40.0% | |
| CTAAATGTAGATCCCCATGA+CGG | + | chr7.1:6154430-6154449 | MS.gene051901:intron | 40.0% | |
| GCAAAGGAAACTTTCCTTCT+GGG | + | chr7.1:6153823-6153842 | MS.gene051901:CDS | 40.0% | |
| GGATTATTATTGGACCAGCT+GGG | + | chr7.1:6152309-6152328 | MS.gene051901:CDS | 40.0% | |
| GGCAATCTCTATTTCAATCC+AGG | + | chr7.1:6151564-6151583 | MS.gene051901:CDS | 40.0% | |
| GTGTCTTGGAGTTTCTTAAG+AGG | + | chr7.1:6153666-6153685 | MS.gene051901:CDS | 40.0% | |
| TATATGTATCCCTACTCCCT+AGG | + | chr7.1:6153077-6153096 | MS.gene051901:intron | 40.0% | |
| TCACTAATCATGAACCCCTT+TGG | + | chr7.1:6151721-6151740 | MS.gene051901:CDS | 40.0% | |
| TCAGTGAGCTATTGTACCTA+GGG | - | chr7.1:6153096-6153115 | None:intergenic | 40.0% | |
| TCGGATGTTAAAACATCCCT+TGG | + | chr7.1:6152844-6152863 | MS.gene051901:intron | 40.0% | |
| TGGATTATTATTGGACCAGC+TGG | + | chr7.1:6152308-6152327 | MS.gene051901:CDS | 40.0% | |
| TGTTAGGAAGAGAGGGATTT+CGG | + | chr7.1:6151956-6151975 | MS.gene051901:CDS | 40.0% | |
| TTAGGGTCCACATATGCAAT+TGG | - | chr7.1:6154027-6154046 | None:intergenic | 40.0% | |
| TTGAGTGCATATGTAAAGCG+GGG | + | chr7.1:6152543-6152562 | MS.gene051901:CDS | 40.0% | |
| TTGGGATGCATTGAGGAATT+GGG | + | chr7.1:6152046-6152065 | MS.gene051901:CDS | 40.0% | |
| ! | GGGTACCCTTTGTTTGATAT+CGG | + | chr7.1:6151822-6151841 | MS.gene051901:CDS | 40.0% |
| ! | GGGTTTGGAATATGAAGTTC+CGG | + | chr7.1:6152229-6152248 | MS.gene051901:CDS | 40.0% |
| ! | GGTACCCTTTGTTTGATATC+GGG | + | chr7.1:6151823-6151842 | MS.gene051901:CDS | 40.0% |
| ! | TGAAGTTCCGGTGTATTTTC+GGG | + | chr7.1:6152241-6152260 | MS.gene051901:CDS | 40.0% |
| ! | TTATGGCAATTGATTCCTCC+AGG | - | chr7.1:6152613-6152632 | None:intergenic | 40.0% |
| ! | TTCTTTGCGTCAGTGGTTTT+AGG | + | chr7.1:6154504-6154523 | MS.gene051901:intron | 40.0% |
| ! | TTTGTGGTGGTAGATTTGGT+TGG | + | chr7.1:6154589-6154608 | MS.gene051901:CDS | 40.0% |
| !! | GGTTTCAGTATAATGGGTCA+TGG | + | chr7.1:6151775-6151794 | MS.gene051901:CDS | 40.0% |
| !!! | GGAGGATTTGTTTGGTGTTT+TGG | + | chr7.1:6152262-6152281 | MS.gene051901:CDS | 40.0% |
| AGCTATTGTACCTAGGGAGT+AGG | - | chr7.1:6153090-6153109 | None:intergenic | 45.0% | |
| AGCTTGGAATGCTGTGATCA+AGG | + | chr7.1:6152370-6152389 | MS.gene051901:CDS | 45.0% | |
| ATACACCCTTCCAACAACAC+CGG | - | chr7.1:6152020-6152039 | None:intergenic | 45.0% | |
| CAAGAACAAGCTCATCAGTG+AGG | - | chr7.1:6151632-6151651 | None:intergenic | 45.0% | |
| CCAACACAAGATTCCTCCAA+AGG | - | chr7.1:6151740-6151759 | None:intergenic | 45.0% | |
| CCACTCCCGATATCAAACAA+AGG | - | chr7.1:6151831-6151850 | None:intergenic | 45.0% | |
| CTAATCATGAACCCCTTTGG+AGG | + | chr7.1:6151724-6151743 | MS.gene051901:CDS | 45.0% | |
| CTTCTTCAACGAGAGATGAG+TGG | - | chr7.1:6151464-6151483 | None:intergenic | 45.0% | |
| CTTGGAATGCTGTGATCAAG+GGG | + | chr7.1:6152372-6152391 | MS.gene051901:CDS | 45.0% | |
| GAAAGGTGAATGGTTGGAGA+GGG | + | chr7.1:6151926-6151945 | MS.gene051901:CDS | 45.0% | |
| GATCAAGGGGTCGAAGAAAT+GGG | + | chr7.1:6152385-6152404 | MS.gene051901:CDS | 45.0% | |
| GATTTCGGTTGAGGAGTTTG+TGG | + | chr7.1:6151971-6151990 | MS.gene051901:CDS | 45.0% | |
| GCTATTGTACCTAGGGAGTA+GGG | - | chr7.1:6153089-6153108 | None:intergenic | 45.0% | |
| GCTTGGAATGCTGTGATCAA+GGG | + | chr7.1:6152371-6152390 | MS.gene051901:CDS | 45.0% | |
| GTCAGTTCATCAATTGCTCC+AGG | - | chr7.1:6153776-6153795 | None:intergenic | 45.0% | |
| TCCCTTGGCATCTCAAAATC+TGG | + | chr7.1:6152859-6152878 | MS.gene051901:intron | 45.0% | |
| TCCTTAAGCTTCATCTCCAC+AGG | - | chr7.1:6152125-6152144 | None:intergenic | 45.0% | |
| TGAAAGGTGAATGGTTGGAG+AGG | + | chr7.1:6151925-6151944 | MS.gene051901:CDS | 45.0% | |
| TGAGTGCATATGTAAAGCGG+GGG | + | chr7.1:6152544-6152563 | MS.gene051901:CDS | 45.0% | |
| TGATCAAGGGGTCGAAGAAA+TGG | + | chr7.1:6152384-6152403 | MS.gene051901:CDS | 45.0% | |
| TTATCTTTGTGCCCAGTGGT+TGG | + | chr7.1:6152570-6152589 | MS.gene051901:CDS | 45.0% | |
| ! | ACAAGTACCGCTAACGTTTG+AGG | - | chr7.1:6153627-6153646 | None:intergenic | 45.0% |
| ! | ACGTTAGCGGTACTTGTTAC+AGG | + | chr7.1:6153630-6153649 | MS.gene051901:intron | 45.0% |
| ! | CACACTGGTATCTGGAACAA+AGG | + | chr7.1:6153700-6153719 | MS.gene051901:CDS | 45.0% |
| ! | CCTTTGGAGGAATCTTGTGT+TGG | + | chr7.1:6151737-6151756 | MS.gene051901:CDS | 45.0% |
| ! | CCTTTGTTTGATATCGGGAG+TGG | + | chr7.1:6151828-6151847 | MS.gene051901:CDS | 45.0% |
| ! | GCTATTGAGGCTTCTTTTCC+TGG | + | chr7.1:6153755-6153774 | MS.gene051901:CDS | 45.0% |
| ! | GGAGTTTGTGGCGAATTTTG+AGG | + | chr7.1:6151983-6152002 | MS.gene051901:CDS | 45.0% |
| ! | GTGGTTTGTGGTGGTAGATT+TGG | + | chr7.1:6154585-6154604 | MS.gene051901:CDS | 45.0% |
| !! | AACTCCAGAGACACTGGTTT+AGG | + | chr7.1:6151594-6151613 | MS.gene051901:CDS | 45.0% |
| !! | AATAAGCCGGTGTTGTTGGA+AGG | + | chr7.1:6152011-6152030 | MS.gene051901:CDS | 45.0% |
| !! | AGATTTGGTTGGTTTCGTGG+TGG | + | chr7.1:6154600-6154619 | MS.gene051901:CDS | 45.0% |
| !! | ATAAGCCGGTGTTGTTGGAA+GGG | + | chr7.1:6152012-6152031 | MS.gene051901:CDS | 45.0% |
| !! | GGTAGATTTGGTTGGTTTCG+TGG | + | chr7.1:6154597-6154616 | MS.gene051901:CDS | 45.0% |
| !! | GGTTAATAAGCCGGTGTTGT+TGG | + | chr7.1:6152007-6152026 | MS.gene051901:CDS | 45.0% |
| !! | GTTTGTGGCGAATTTTGAGG+AGG | + | chr7.1:6151986-6152005 | MS.gene051901:CDS | 45.0% |
| !!! | AGCCAGATTTTGAGATGCCA+AGG | - | chr7.1:6152864-6152883 | None:intergenic | 45.0% |
| !!! | GCCAGATTTTGAGATGCCAA+GGG | - | chr7.1:6152863-6152882 | None:intergenic | 45.0% |
| !!! | TGTTTTTAGAGAGAGGGCAG+AGG | - | chr7.1:6154369-6154388 | None:intergenic | 45.0% |
| !!! | TTTGCGTCAGTGGTTTTAGG+AGG | + | chr7.1:6154507-6154526 | MS.gene051901:intron | 45.0% |
| AACACCGGGCGGAATAACAT+CGG | - | chr7.1:6152423-6152442 | None:intergenic | 50.0% | |
| AACGCAAGCACACTGGTATC+TGG | + | chr7.1:6153692-6153711 | MS.gene051901:CDS | 50.0% | |
| ACCAAATGCCACCAACCACT+GGG | - | chr7.1:6152584-6152603 | None:intergenic | 50.0% | |
| AGGAGTTGGATTTGAGGGAG+AGG | - | chr7.1:6154404-6154423 | None:intergenic | 50.0% | |
| AGGTTCGCGCCAATATCTCA+AGG | - | chr7.1:6153137-6153156 | None:intergenic | 50.0% | |
| ATCAGGGCTAGGATGAACAC+CGG | - | chr7.1:6152438-6152457 | None:intergenic | 50.0% | |
| ATGCTACCTCTGCACCATCA+GGG | - | chr7.1:6152454-6152473 | None:intergenic | 50.0% | |
| ATTATTGGACCAGCTGGGTC+TGG | + | chr7.1:6152314-6152333 | MS.gene051901:CDS | 50.0% | |
| GAACTTGAAAGCTCCCACTC+TGG | - | chr7.1:6153864-6153883 | None:intergenic | 50.0% | |
| GAAGAGAGGGATTTCGGTTG+AGG | + | chr7.1:6151962-6151981 | MS.gene051901:CDS | 50.0% | |
| GAGGTTATCTTTGTGCCCAG+TGG | + | chr7.1:6152566-6152585 | MS.gene051901:CDS | 50.0% | |
| GATACCAGTGTGCTTGCGTT+CGG | - | chr7.1:6153692-6153711 | None:intergenic | 50.0% | |
| GATCTCGTGAAGGTTTGTGG+TGG | + | chr7.1:6154622-6154641 | MS.gene051901:CDS | 50.0% | |
| GCCTGTGGAGATGAAGCTTA+AGG | + | chr7.1:6152121-6152140 | MS.gene051901:CDS | 50.0% | |
| GGAGTTGGATTTGAGGGAGA+GGG | - | chr7.1:6154403-6154422 | None:intergenic | 50.0% | |
| GTAGAATCAGTGTGTCGCAC+TGG | - | chr7.1:6153340-6153359 | None:intergenic | 50.0% | |
| GTCTGCAACAGAATCCCAGA+AGG | - | chr7.1:6153840-6153859 | None:intergenic | 50.0% | |
| GTGGATCTCGTGAAGGTTTG+TGG | + | chr7.1:6154619-6154638 | MS.gene051901:CDS | 50.0% | |
| TCATTGAAGCTGCAATGGCG+TGG | - | chr7.1:6153015-6153034 | None:intergenic | 50.0% | |
| TCCATCAACTCCAGAGACAC+TGG | + | chr7.1:6151588-6151607 | MS.gene051901:CDS | 50.0% | |
| TCTGTTGCAGACACCAGAGT+GGG | + | chr7.1:6153848-6153867 | MS.gene051901:intron | 50.0% | |
| TTCTGTTGCAGACACCAGAG+TGG | + | chr7.1:6153847-6153866 | MS.gene051901:intron | 50.0% | |
| TTGATATCGGGAGTGGCGTT+CGG | + | chr7.1:6151835-6151854 | MS.gene051901:CDS | 50.0% | |
| ! | GCATTTGGTGATCAACCTGG+AGG | + | chr7.1:6152595-6152614 | MS.gene051901:CDS | 50.0% |
| ! | GTGGCATTTGGTGATCAACC+TGG | + | chr7.1:6152592-6152611 | MS.gene051901:CDS | 50.0% |
| ! | TAAGTTTTCGGTTGGGCCTG+TGG | + | chr7.1:6152106-6152125 | MS.gene051901:CDS | 50.0% |
| !! | ACCAGTGTCTCTGGAGTTGA+TGG | - | chr7.1:6151592-6151611 | None:intergenic | 50.0% |
| !! | AGTTCCGGTGTATTTTCGGG+AGG | + | chr7.1:6152244-6152263 | MS.gene051901:CDS | 50.0% |
| !! | CTGGCTCTTTAGAGTGTCCT+TGG | + | chr7.1:6152878-6152897 | MS.gene051901:intron | 50.0% |
| !! | TCTCTGGAGTTGATGGAACC+TGG | - | chr7.1:6151585-6151604 | None:intergenic | 50.0% |
| !! | TTTCGTGGTGGATCTCGTGA+AGG | + | chr7.1:6154612-6154631 | MS.gene051901:CDS | 50.0% |
| AAAGACGATCCAGACCCAGC+TGG | - | chr7.1:6152326-6152345 | None:intergenic | 55.0% | |
| AAGGGGCTCCGACTTTGTGA+AGG | - | chr7.1:6153157-6153176 | None:intergenic | 55.0% | |
| ACAAAGTCGGAGCCCCTTCT+AGG | + | chr7.1:6153159-6153178 | MS.gene051901:intron | 55.0% | |
| ACACCGGGCGGAATAACATC+GGG | - | chr7.1:6152422-6152441 | None:intergenic | 55.0% | |
| CACCAAATGCCACCAACCAC+TGG | - | chr7.1:6152585-6152604 | None:intergenic | 55.0% | |
| CCTCATCGCATCACCGTCAT+GGG | - | chr7.1:6154446-6154465 | None:intergenic | 55.0% | |
| CTCATCGCATCACCGTCATG+GGG | - | chr7.1:6154445-6154464 | None:intergenic | 55.0% | |
| GATGCTACCTCTGCACCATC+AGG | - | chr7.1:6152455-6152474 | None:intergenic | 55.0% | |
| GGCGCGAACCTTCACAAAGT+CGG | + | chr7.1:6153146-6153165 | MS.gene051901:intron | 55.0% | |
| GGTGTTCATCCTAGCCCTGA+TGG | + | chr7.1:6152437-6152456 | MS.gene051901:CDS | 55.0% | |
| GTGCATATGTAAAGCGGGGG+AGG | + | chr7.1:6152547-6152566 | MS.gene051901:CDS | 55.0% | |
| GTTGGATTTGAGGGAGAGGG+AGG | - | chr7.1:6154400-6154419 | None:intergenic | 55.0% | |
| TCAGGGCTAGGATGAACACC+GGG | - | chr7.1:6152437-6152456 | None:intergenic | 55.0% | |
| TCTTTGTGCCCAGTGGTTGG+TGG | + | chr7.1:6152573-6152592 | MS.gene051901:CDS | 55.0% | |
| TGAACACCGTGGGTGTGTGA+CGG | - | chr7.1:6151537-6151556 | None:intergenic | 55.0% | |
| TGGTGGTTCGTGGTGGTTTG+TGG | + | chr7.1:6154573-6154592 | MS.gene051901:CDS | 55.0% | |
| ! | TGGTTCGTGGTGGTTTGTGG+TGG | + | chr7.1:6154576-6154595 | MS.gene051901:CDS | 55.0% |
| !!! | GCGTCAGTGGTTTTAGGAGG+TGG | + | chr7.1:6154510-6154529 | MS.gene051901:intron | 55.0% |
| AAAGAACGCCGTGTAGCCGG+AGG | - | chr7.1:6154490-6154509 | None:intergenic | 60.0% | |
| AACACCGTGGGTGTGTGACG+GGG | - | chr7.1:6151535-6151554 | None:intergenic | 60.0% | |
| ACCCACGGTGTTCAGCCCTT+GGG | + | chr7.1:6151543-6151562 | MS.gene051901:CDS | 60.0% | |
| ACCTCTGCACCATCAGGGCT+AGG | - | chr7.1:6152449-6152468 | None:intergenic | 60.0% | |
| CACGGCGTTCTTTGCGTCAG+TGG | + | chr7.1:6154497-6154516 | MS.gene051901:intron | 60.0% | |
| CCCATGACGGTGATGCGATG+AGG | + | chr7.1:6154443-6154462 | MS.gene051901:intron | 60.0% | |
| CCTCCCGATGTTATTCCGCC+CGG | + | chr7.1:6152416-6152435 | MS.gene051901:CDS | 60.0% | |
| CGCAAAGAACGCCGTGTAGC+CGG | - | chr7.1:6154493-6154512 | None:intergenic | 60.0% | |
| GAACACCGTGGGTGTGTGAC+GGG | - | chr7.1:6151536-6151555 | None:intergenic | 60.0% | |
| GCCTCATCGCATCACCGTCA+TGG | - | chr7.1:6154447-6154466 | None:intergenic | 60.0% | |
| GTGGTTGTAGCTGCTCGCAG+TGG | + | chr7.1:6154529-6154548 | MS.gene051901:CDS | 60.0% | |
| GTTGTAGCTGCTCGCAGTGG+TGG | + | chr7.1:6154532-6154551 | MS.gene051901:CDS | 60.0% | |
| TAGCCGGAGGTGAGGTGATG+CGG | - | chr7.1:6154477-6154496 | None:intergenic | 60.0% | |
| TCACCTCACCTCCGGCTACA+CGG | + | chr7.1:6154479-6154498 | MS.gene051901:intron | 60.0% | |
| ! | TCCTAGCCCTGATGGTGCAG+AGG | + | chr7.1:6152445-6152464 | MS.gene051901:CDS | 60.0% |
| !! | CAGTGGTGGTGGTTGTGGTG+GGG | + | chr7.1:6154546-6154565 | MS.gene051901:CDS | 60.0% |
| !! | GCAGTGGTGGTGGTTGTGGT+GGG | + | chr7.1:6154545-6154564 | MS.gene051901:CDS | 60.0% |
| !! | GCCCAGTGGTTGGTGGCATT+TGG | + | chr7.1:6152580-6152599 | MS.gene051901:CDS | 60.0% |
| CACCCACGGTGTTCAGCCCT+TGG | + | chr7.1:6151542-6151561 | MS.gene051901:CDS | 65.0% | |
| CCGGGCGGAATAACATCGGG+AGG | - | chr7.1:6152419-6152438 | None:intergenic | 65.0% | |
| CCTCCGCATCACCTCACCTC+CGG | + | chr7.1:6154471-6154490 | MS.gene051901:intron | 65.0% | |
| GACGGTGATGCGATGAGGCG+CGG | + | chr7.1:6154448-6154467 | MS.gene051901:intron | 65.0% | |
| GAGGCCGAACGCAAGCACAC+TGG | + | chr7.1:6153685-6153704 | MS.gene051901:CDS | 65.0% | |
| GCCCAAGGGCTGAACACCGT+GGG | - | chr7.1:6151547-6151566 | None:intergenic | 65.0% | |
| GGGCTAGGATGAACACCGGG+CGG | - | chr7.1:6152434-6152453 | None:intergenic | 65.0% | |
| GTAGCTGCTCGCAGTGGTGG+TGG | + | chr7.1:6154535-6154554 | MS.gene051901:CDS | 65.0% | |
| TCTGCCCCGTCACACACCCA+CGG | + | chr7.1:6151528-6151547 | MS.gene051901:CDS | 65.0% | |
| TGCCCAAGGGCTGAACACCG+TGG | - | chr7.1:6151548-6151567 | None:intergenic | 65.0% | |
| ! | GGTGGTTGTGGTGGGGCTGA+TGG | + | chr7.1:6154553-6154572 | MS.gene051901:CDS | 65.0% |
| ! | GGTTGTGGTGGGGCTGATGG+TGG | + | chr7.1:6154556-6154575 | MS.gene051901:CDS | 65.0% |
| !! | CGCAGTGGTGGTGGTTGTGG+TGG | + | chr7.1:6154544-6154563 | MS.gene051901:CDS | 65.0% |
| !! | GCTCGCAGTGGTGGTGGTTG+TGG | + | chr7.1:6154541-6154560 | MS.gene051901:CDS | 65.0% |
| !! | GGGCTGATGGTGGTTCGTGG+TGG | + | chr7.1:6154566-6154585 | MS.gene051901:CDS | 65.0% |
| !! | GTGGGGCTGATGGTGGTTCG+TGG | + | chr7.1:6154563-6154582 | MS.gene051901:CDS | 65.0% |
| ACGCCGTGTAGCCGGAGGTG+AGG | - | chr7.1:6154485-6154504 | None:intergenic | 70.0% | |
| CCGGAGGTGAGGTGATGCGG+AGG | - | chr7.1:6154474-6154493 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 6151327 | 6154648 | 6151327 | ID=MS.gene051901 |
| chr7.1 | mRNA | 6151327 | 6154648 | 6151327 | ID=MS.gene051901.t1;Parent=MS.gene051901 |
| chr7.1 | exon | 6151327 | 6152651 | 6151327 | ID=MS.gene051901.t1.exon1;Parent=MS.gene051901.t1 |
| chr7.1 | CDS | 6151327 | 6152651 | 6151327 | ID=cds.MS.gene051901.t1;Parent=MS.gene051901.t1 |
| chr7.1 | exon | 6153652 | 6153865 | 6153652 | ID=MS.gene051901.t1.exon2;Parent=MS.gene051901.t1 |
| chr7.1 | CDS | 6153652 | 6153865 | 6153652 | ID=cds.MS.gene051901.t1;Parent=MS.gene051901.t1 |
| chr7.1 | exon | 6154526 | 6154648 | 6154526 | ID=MS.gene051901.t1.exon3;Parent=MS.gene051901.t1 |
| chr7.1 | CDS | 6154526 | 6154648 | 6154526 | ID=cds.MS.gene051901.t1;Parent=MS.gene051901.t1 |
| Gene Sequence |
| Protein sequence |
