AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052055

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052055.t1 MTR_2g097020 90.869 679 43 5 1 672 1 667 0.0 1209
MS.gene052055.t1 MTR_2g095400 80.531 678 85 5 1 672 1 637 0.0 1030
MS.gene052055.t1 MTR_2g097010 80.826 678 124 1 1 672 1 678 0.0 1027
MS.gene052055.t1 MTR_4g046643 80.303 660 118 3 1 655 1 653 0.0 1025
MS.gene052055.t1 MTR_2g097000 74.872 390 80 3 299 672 2 389 0.0 534
MS.gene052055.t1 MTR_3g067815 39.552 670 347 12 10 667 13 636 5.49e-154 459
MS.gene052055.t1 MTR_5g079940 38.009 663 365 16 21 671 492 1120 4.62e-135 424
MS.gene052055.t1 MTR_4g126200 74.144 263 52 3 414 672 3 253 2.52e-129 382
MS.gene052055.t1 MTR_4g131350 36.472 669 354 16 16 671 72 682 2.17e-116 364
MS.gene052055.t1 MTR_4g006760 35.650 662 352 15 21 668 24 625 1.73e-115 360
MS.gene052055.t1 MTR_4g125920 36.173 669 356 16 16 671 19 629 2.74e-115 359
MS.gene052055.t1 MTR_4g126180 78.261 115 25 0 300 414 3 117 2.82e-50 171
MS.gene052055.t1 MTR_3g067855 44.545 220 106 4 441 659 123 327 2.21e-47 171
MS.gene052055.t1 MTR_8g446460 55.882 136 51 3 9 138 107 239 5.90e-36 138
MS.gene052055.t1 MTR_3g067845 35.448 268 154 5 406 671 1 251 3.65e-35 134
MS.gene052055.t1 MTR_4g131310 26.269 453 240 12 16 458 19 387 2.13e-30 125
MS.gene052055.t1 MTR_4g131310 57.812 64 27 0 597 660 391 454 2.12e-17 85.9
MS.gene052055.t1 MTR_2g066850 65.882 85 24 3 2 84 66 147 7.06e-25 111
MS.gene052055.t1 MTR_2g075630 74.242 66 14 2 2 67 67 129 3.88e-24 102
MS.gene052055.t1 MTR_8g063010 61.905 63 21 2 18 80 57 116 3.26e-18 84.0
MS.gene052055.t1 MTR_3g067825 45.783 83 41 1 581 659 10 92 2.95e-16 75.9
MS.gene052055.t1 MTR_5g044360 60.000 50 18 2 25 74 76 123 3.42e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052055.t1 AT1G13790 46.881 529 259 7 139 663 216 726 1.45e-142 433
MS.gene052055.t1 AT1G13790 50.633 79 31 4 12 87 9 82 6.23e-11 66.2
MS.gene052055.t1 AT1G13790 46.881 529 259 7 139 663 216 726 1.45e-142 433
MS.gene052055.t1 AT1G13790 50.633 79 31 4 12 87 9 82 6.23e-11 66.2
MS.gene052055.t1 AT3G12550 35.789 665 373 13 13 663 5 629 9.22e-118 366
MS.gene052055.t1 AT3G48670 35.163 674 373 14 13 671 21 645 9.63e-118 366
MS.gene052055.t1 AT3G48670 35.163 674 373 14 13 671 21 645 9.63e-118 366
MS.gene052055.t1 AT3G48670 35.163 674 373 14 13 671 21 645 9.63e-118 366
MS.gene052055.t1 AT3G12550 35.586 666 374 14 13 663 5 630 3.24e-116 362
MS.gene052055.t1 AT3G12550 35.586 666 374 14 13 663 5 630 3.24e-116 362
MS.gene052055.t1 AT3G12550 35.586 666 374 14 13 663 5 630 3.24e-116 362
MS.gene052055.t1 AT1G15910 34.269 677 364 15 16 671 18 634 7.54e-110 345
MS.gene052055.t1 AT5G59390 36.920 539 306 9 133 661 25 539 3.64e-105 331
MS.gene052055.t1 AT5G59390 36.920 539 306 9 133 661 25 539 3.64e-105 331
MS.gene052055.t1 AT5G59390 36.920 539 306 9 133 661 25 539 3.64e-105 331
MS.gene052055.t1 AT4G00380 33.784 666 360 16 15 659 18 623 9.74e-104 329
MS.gene052055.t1 AT4G00380 33.784 666 360 16 15 659 18 623 9.74e-104 329
MS.gene052055.t1 AT5G59390 36.581 544 306 10 133 661 25 544 1.32e-102 324
MS.gene052055.t1 AT5G59390 36.581 544 306 10 133 661 25 544 1.32e-102 324
MS.gene052055.t1 AT4G00380 36.313 537 293 9 141 659 90 595 6.05e-101 321
MS.gene052055.t1 AT1G80790 34.370 675 366 14 15 671 19 634 1.13e-100 321
MS.gene052055.t1 AT1G80790 34.370 675 366 14 15 671 19 634 1.13e-100 321
MS.gene052055.t1 AT4G01180 36.464 543 297 10 137 661 27 539 3.95e-97 310
MS.gene052055.t1 AT3G12550 33.276 586 337 13 16 587 8 553 2.89e-85 279
MS.gene052055.t1 AT4G01780 32.903 465 205 12 209 671 111 470 2.42e-58 204
MS.gene052055.t1 AT1G80790 29.870 462 261 11 15 458 19 435 5.62e-54 192
MS.gene052055.t1 AT3G29375 41.429 210 101 5 462 670 38 226 4.76e-41 150
MS.gene052055.t1 AT3G29375 41.429 210 101 5 462 670 161 349 1.20e-38 147
MS.gene052055.t1 AT3G29375 36.508 126 61 3 462 587 38 144 1.60e-14 72.8
MS.gene052055.t1 AT2G16490 40.000 65 39 0 596 660 74 138 1.08e-11 64.7

Find 158 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCCATTGTTTAATTAAA+TGG 0.065652 2.2:-4603840 None:intergenic
TTCCTCGGTCTTCAGCTTTA+AGG 0.140650 2.2:-4601185 None:intergenic
GGGGATTTGAAAACTGTTTC+TGG 0.144259 2.2:+4601106 MS.gene052055:CDS
CCCTTTGCAGTTGTTCAATT+TGG 0.168840 2.2:+4600899 MS.gene052055:CDS
ACTTGATATTAAGCCATTTC+TGG 0.206556 2.2:+4603191 MS.gene052055:CDS
TAAACAATGGAAATTAAATA+AGG 0.236962 2.2:+4603849 MS.gene052055:CDS
AAAGTTTGAAGGATGATTTC+GGG 0.265267 2.2:+4603686 MS.gene052055:CDS
ATGACTCGAGCAGTGTTCTT+TGG 0.279903 2.2:-4603144 None:intergenic
GATGCTTGAACATTTCAATA+AGG 0.283852 2.2:+4601279 MS.gene052055:CDS
AAAAGTTTGAAGGATGATTT+CGG 0.295553 2.2:+4603685 MS.gene052055:CDS
CTCTTAGCTGCTTCCAGAAA+TGG 0.310177 2.2:-4603204 None:intergenic
TCCCTAAAATTCCAAAGTTC+TGG 0.313529 2.2:-4603784 None:intergenic
AATTCCAAAGTTCTGGTATT+GGG 0.314445 2.2:-4603777 None:intergenic
CTCCAATTCCAATGCCTGTT+TGG 0.322709 2.2:-4602199 None:intergenic
GAGGGATTACTTGGCTTTAC+GGG 0.324290 2.2:+4600991 MS.gene052055:CDS
TCAACAAACGCTGGTTGTTC+AGG 0.326781 2.2:+4602356 MS.gene052055:CDS
GAGCGGGGAGATAGACTCTT+TGG 0.328386 2.2:+4601019 MS.gene052055:CDS
CCTTGTAGTAATCATCCTTC+AGG 0.329123 2.2:-4600379 None:intergenic
ACGGCTGAAAGGAGCTTTCC+AGG 0.341751 2.2:+4602227 MS.gene052055:CDS
TTTGATCCATCGCTTTCCTT+AGG 0.347229 2.2:-4601249 None:intergenic
GGCTTTACGGGAGCAGGAGC+GGG 0.350376 2.2:+4601003 MS.gene052055:CDS
TGCCAAACAGGCATTGGAAT+TGG 0.350612 2.2:+4602197 MS.gene052055:CDS
GAATGATGCTGAGGGTCATT+TGG 0.358140 2.2:+4600682 MS.gene052055:CDS
TTTCCATTGTTTAATTAAAT+GGG 0.360061 2.2:-4603839 None:intergenic
ACCTGAGTCACCCACAATTC+TGG 0.361313 2.2:-4600492 None:intergenic
GGCAAACACCTCCAGGGAAA+TGG 0.364188 2.2:+4601085 MS.gene052055:CDS
ACTGCCCTGTGGAACTTTAG+AGG 0.368266 2.2:+4600869 MS.gene052055:CDS
GGTCTTCAGCTTTAAGGTAT+TGG 0.374345 2.2:-4601179 None:intergenic
AGAGGGATTACTTGGCTTTA+CGG 0.374808 2.2:+4600990 MS.gene052055:CDS
ATGCTTGAACATTTCAATAA+GGG 0.377132 2.2:+4601280 MS.gene052055:CDS
AAAGCTGAAGACCGAGGAAT+TGG 0.379202 2.2:+4601189 MS.gene052055:CDS
ACAAGCTCGTGAGTCTGATT+TGG 0.387571 2.2:+4600328 MS.gene052055:CDS
AAATTCCAAAGTTCTGGTAT+TGG 0.389092 2.2:-4603778 None:intergenic
TGACTCGAGCAGTGTTCTTT+GGG 0.389447 2.2:-4603143 None:intergenic
GCAAACACCTCCAGGGAAAT+GGG 0.392632 2.2:+4601086 MS.gene052055:CDS
CACAGGGCAGTAACTTTCAA+TGG 0.399272 2.2:-4600857 None:intergenic
CTCCAATGTGATTCATTACC+TGG 0.402190 2.2:-4602245 None:intergenic
GGAAAGAAGCTGAGGACAAT+AGG 0.403031 2.2:+4601128 MS.gene052055:CDS
GGGATTTGAAAACTGTTTCT+GGG 0.403525 2.2:+4601107 MS.gene052055:CDS
TTGATCCATCGCTTTCCTTA+GGG 0.410024 2.2:-4601248 None:intergenic
CTGTGGTAAGAGGGATTACT+TGG 0.417597 2.2:+4600982 MS.gene052055:CDS
TCACATTGGAGAGACTGATA+TGG 0.420018 2.2:+4602257 MS.gene052055:CDS
GAGGAAGCTTCTCTCTGGTT+TGG 0.422362 2.2:+4601156 MS.gene052055:CDS
TATAATTTCAAAGATATAGT+TGG 0.424336 2.2:+4601064 MS.gene052055:CDS
GAGAGGACTTGATGCCAAAC+AGG 0.424502 2.2:+4602185 MS.gene052055:CDS
TTACTTGGCTTTACGGGAGC+AGG 0.431347 2.2:+4600997 MS.gene052055:CDS
AAACAATGGAAATTAAATAA+GGG 0.432138 2.2:+4603850 MS.gene052055:CDS
CAGAATGGAGCTGCAGGAAA+AGG 0.433632 2.2:+4602305 MS.gene052055:CDS
GGAAGAGGAACTAGAGGGTG+TGG 0.439248 2.2:+4602326 MS.gene052055:CDS
TTTACTTGTGCACAGTGGAT+TGG 0.457461 2.2:+4603117 MS.gene052055:intron
AATGATGCTGAGGGTCATTT+GGG 0.461869 2.2:+4600683 MS.gene052055:CDS
TATAGTTGGCAAACACCTCC+AGG 0.464223 2.2:+4601078 MS.gene052055:CDS
ATACCAGGAGAAAGTATCTA+AGG 0.466801 2.2:+4601528 MS.gene052055:CDS
ATGATGATGAGTTGTTTGTA+TGG 0.467760 2.2:+4600720 MS.gene052055:CDS
TTTCTTCTCAAAATATAGCT+TGG 0.468603 2.2:-4601653 None:intergenic
GGATCATGAAAAGGCCAGGC+TGG 0.471261 2.2:+4601549 MS.gene052055:CDS
AGCAATCAGAATGGAGCTGC+AGG 0.472823 2.2:+4602299 MS.gene052055:CDS
GTCTTTGGCTGAAGAACATA+AGG 0.472836 2.2:+4602031 MS.gene052055:CDS
ACTTGATGCCAAACAGGCAT+TGG 0.473867 2.2:+4602191 MS.gene052055:CDS
AAGCAGAGCACTGTGGTAAG+AGG 0.475875 2.2:+4600972 MS.gene052055:CDS
AGGAGGAGCTGATCATGAAC+GGG 0.480433 2.2:+4600828 MS.gene052055:CDS
TGGCTTTACGGGAGCAGGAG+CGG 0.481924 2.2:+4601002 MS.gene052055:CDS
TGGCATCAAGTCCTCTCTCC+AGG 0.485549 2.2:-4602179 None:intergenic
CATAATTTCTGTGAAAAGGA+TGG 0.486804 2.2:+4603164 MS.gene052055:CDS
AGATAGACTCTTTGGGTGGA+TGG 0.488205 2.2:+4601027 MS.gene052055:CDS
GGTACCCAATACCAGAACTT+TGG 0.490402 2.2:+4603773 MS.gene052055:CDS
AGCTGTCTGCTCCAATTCCT+CGG 0.490587 2.2:-4601200 None:intergenic
ATTAACAATACTAACACAAT+GGG 0.490885 2.2:-4600612 None:intergenic
AAGGAAAGCGATGGATCAAA+AGG 0.493646 2.2:+4601252 MS.gene052055:CDS
AGTATCTAAGGATCATGAAA+AGG 0.500223 2.2:+4601540 MS.gene052055:CDS
TTTGTCCTCTAAAGTTCCAC+AGG 0.503452 2.2:-4600874 None:intergenic
AGCGGGGAGATAGACTCTTT+GGG 0.503541 2.2:+4601020 MS.gene052055:CDS
AAAGCGAGGAAGCTTCTCTC+TGG 0.506331 2.2:+4601151 MS.gene052055:CDS
AAAGTTGTAACTGACAAAGA+AGG 0.506666 2.2:+4603357 MS.gene052055:CDS
CCAAATTGAACAACTGCAAA+GGG 0.510429 2.2:-4600899 None:intergenic
GAGTCATAATTTCTGTGAAA+AGG 0.512368 2.2:+4603160 MS.gene052055:CDS
GAAGGATGATTTCGGGGATG+AGG 0.514919 2.2:+4603693 MS.gene052055:CDS
GGAAAAGGAAGAGGAACTAG+AGG 0.515896 2.2:+4602320 MS.gene052055:CDS
ATGAGTTGTTTGTATGGCCA+TGG 0.517649 2.2:+4600726 MS.gene052055:CDS
CCGAGCTTCTAGTTCCAGCC+TGG 0.518163 2.2:-4601563 None:intergenic
ACAGGGCAGTAACTTTCAAT+GGG 0.518654 2.2:-4600856 None:intergenic
AAAGTGGGATGACTTTGTTA+AGG 0.519671 2.2:+4603314 MS.gene052055:CDS
TTGTCAGTTACAACTTTGAA+CGG 0.521069 2.2:-4603351 None:intergenic
TGTTGCTAAGCATTCAGCTC+TGG 0.522198 2.2:+4600529 MS.gene052055:CDS
CGAACTTATTTCCCGTGAGA+AGG 0.523382 2.2:+4601591 MS.gene052055:CDS
GGTATTGGGTACCTACCACT+AGG 0.523917 2.2:-4603763 None:intergenic
TCCAAATTGAACAACTGCAA+AGG 0.527752 2.2:-4600900 None:intergenic
GCAAGTTGAACGTGAATACC+AGG 0.533666 2.2:+4601513 MS.gene052055:CDS
GGCAATAGAAGAGCAACAAA+AGG 0.535693 2.2:+4601992 MS.gene052055:CDS
TAATCCTTGTTGTAGCAAAA+CGG 0.536850 2.2:-4600437 None:intergenic
TCCAGAATTGTGGGTGACTC+AGG 0.538417 2.2:+4600491 MS.gene052055:CDS
TGTTCAATTTGGAAGAGAGT+GGG 0.538931 2.2:+4600910 MS.gene052055:CDS
TAGTATTGTTAATGATAAGT+CGG 0.539521 2.2:+4600622 MS.gene052055:CDS
AGGAAGGAAGGCTTCATTGA+AGG 0.541212 2.2:+4603807 MS.gene052055:CDS
GCTTTACGGGAGCAGGAGCG+GGG 0.541512 2.2:+4601004 MS.gene052055:CDS
TTTCCCATTTAATTAAACAA+TGG 0.546251 2.2:+4603836 MS.gene052055:CDS
TTGTTCAATTTGGAAGAGAG+TGG 0.547384 2.2:+4600909 MS.gene052055:CDS
ACTTTGAACGGATGCCAGCT+TGG 0.548798 2.2:-4603339 None:intergenic
GATCCTTAGATACTTTCTCC+TGG 0.553646 2.2:-4601531 None:intergenic
CTAAGGATCATGAAAAGGCC+AGG 0.555820 2.2:+4601545 MS.gene052055:CDS
TGCAGTAGCTACAGCTCTGA+AGG 0.557138 2.2:+4603723 MS.gene052055:CDS
AAAATTGGAAGCAATCAGAA+TGG 0.559788 2.2:+4602290 MS.gene052055:CDS
CCTGAAGGATGATTACTACA+AGG 0.560609 2.2:+4600379 MS.gene052055:CDS
AGCAGAGCACTGTGGTAAGA+GGG 0.561293 2.2:+4600973 MS.gene052055:CDS
ATAATTTCTGTGAAAAGGAT+GGG 0.567235 2.2:+4603165 MS.gene052055:CDS
TCAAATCCCCATTTCCCTGG+AGG 0.569890 2.2:-4601093 None:intergenic
AAGGAGGAGCTGATCATGAA+CGG 0.571820 2.2:+4600827 MS.gene052055:CDS
GGAGCTGCAGGAAAAGGAAG+AGG 0.576364 2.2:+4602311 MS.gene052055:CDS
AAGGGAAAGAAAGCTTATTG+AGG 0.581176 2.2:+4603868 MS.gene052055:CDS
CAATTTGGAAGAGAGTGGGA+TGG 0.581803 2.2:+4600914 MS.gene052055:CDS
CATTAACAATACTAACACAA+TGG 0.582752 2.2:-4600613 None:intergenic
CAATCGAGTGGTGCTCAAAG+TGG 0.583300 2.2:+4603298 MS.gene052055:CDS
AATCGAGTGGTGCTCAAAGT+GGG 0.588592 2.2:+4603299 MS.gene052055:CDS
AAAATTCATGACCTGGAGAG+AGG 0.591924 2.2:+4602168 MS.gene052055:CDS
GTATTGGGTACCTACCACTA+GGG 0.598398 2.2:-4603762 None:intergenic
GAGACATGCATCCAGAATTG+TGG 0.598602 2.2:+4600481 MS.gene052055:CDS
GCAAAACGGACAGCGAAACG+TGG 0.601097 2.2:-4600423 None:intergenic
ACTTATTATGAATGATGCTG+AGG 0.601843 2.2:+4600673 MS.gene052055:CDS
CATTGGAATTGGAGATAGAA+CGG 0.601983 2.2:+4602208 MS.gene052055:CDS
TTCCAGGTAATGAATCACAT+TGG 0.602846 2.2:+4602243 MS.gene052055:CDS
TTGGAGATAGAACGGCTGAA+AGG 0.603749 2.2:+4602216 MS.gene052055:CDS
AAGTTGTAACTGACAAAGAA+GGG 0.606382 2.2:+4603358 MS.gene052055:CDS
TCACAAGAAAATTCATGACC+TGG 0.607531 2.2:+4602161 MS.gene052055:CDS
GCTTCTGCAGATCCTTCTCA+CGG 0.608508 2.2:-4601603 None:intergenic
CCAGGCTGGAACTAGAAGCT+CGG 0.611703 2.2:+4601563 MS.gene052055:CDS
GACAGCTAGCAAGTATGATG+AGG 0.612521 2.2:+4601216 MS.gene052055:CDS
AGACATGCATCCAGAATTGT+GGG 0.616586 2.2:+4600482 MS.gene052055:CDS
TAGATATTATGAAGACCTGA+AGG 0.618566 2.2:+4600364 MS.gene052055:CDS
GTTGTTTGTATGGCCATGGA+TGG 0.618975 2.2:+4600730 MS.gene052055:CDS
ATGAGGTGAATGTGTCCCTA+AGG 0.619227 2.2:+4601233 MS.gene052055:CDS
TGTGTCCCTAAGGAAAGCGA+TGG 0.619461 2.2:+4601243 MS.gene052055:CDS
CTTCTGCAGATCCTTCTCAC+GGG 0.621177 2.2:-4601602 None:intergenic
CTGAGGACAATAGGAAAGCG+AGG 0.623390 2.2:+4601137 MS.gene052055:CDS
AGGAAGGCTTCATTGAAGGA+AGG 0.630962 2.2:+4603811 MS.gene052055:CDS
TGTTTCTGGGAAAGAAGCTG+AGG 0.631054 2.2:+4601120 MS.gene052055:CDS
ACTTTGTTAAGGATCCAAGC+TGG 0.631892 2.2:+4603325 MS.gene052055:CDS
CTTATTATGAATGATGCTGA+GGG 0.632417 2.2:+4600674 MS.gene052055:CDS
TTGTTGTTTACAGAATGAGA+TGG 0.635228 2.2:+4601971 MS.gene052055:intron
TCTCTAACTTCATAGCATTG+TGG 0.639586 2.2:-4600940 None:intergenic
TGCAAATGAAAGCAATCGAG+TGG 0.643737 2.2:+4603286 MS.gene052055:CDS
CATTAGAGATCAGCAAGATG+CGG 0.643905 2.2:+4601491 MS.gene052055:intron
ATGAGTACAACCCTAGTGGT+AGG 0.644559 2.2:+4603752 MS.gene052055:CDS
CAAACACCTCCAGGGAAATG+GGG 0.645793 2.2:+4601087 MS.gene052055:CDS
AAGTTTGAAGGATGATTTCG+GGG 0.646352 2.2:+4603687 MS.gene052055:CDS
AATTGTGGGTGACTCAGGTG+AGG 0.654445 2.2:+4600496 MS.gene052055:CDS
ACAATGCTATGAAGTTAGAG+AGG 0.654487 2.2:+4600942 MS.gene052055:CDS
ATAGTTGGCAAACACCTCCA+GGG 0.662157 2.2:+4601079 MS.gene052055:CDS
TACCTTAAAGCTGAAGACCG+AGG 0.663520 2.2:+4601183 MS.gene052055:CDS
TGACAAAGAAGGGAACTCCA+AGG 0.667692 2.2:+4603368 MS.gene052055:CDS
CATTGAAAGTTACTGCCCTG+TGG 0.673584 2.2:+4600858 MS.gene052055:CDS
GGAAGATCTTCAACAAACGC+TGG 0.674192 2.2:+4602347 MS.gene052055:CDS
GAAAAGGAAGAGGAACTAGA+GGG 0.677377 2.2:+4602321 MS.gene052055:CDS
GAAATGTATATTGAAAGCTA+TGG 0.677454 2.2:+4600551 MS.gene052055:CDS
TTGTCCTCTAAAGTTCCACA+GGG 0.695033 2.2:-4600873 None:intergenic
GGCTGGAACTAGAAGCTCGG+AGG 0.704210 2.2:+4601566 MS.gene052055:CDS
TTAAATGAGTACAACCCTAG+TGG 0.707957 2.2:+4603748 MS.gene052055:CDS
GGGGAGATAGACTCTTTGGG+TGG 0.722759 2.2:+4601023 MS.gene052055:CDS
AGCTTTCAAGCAGAGCACTG+TGG 0.771291 2.2:+4600965 MS.gene052055:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAATGGAAATTAAATAA+GGG + chr2.2:4603850-4603869 MS.gene052055:CDS 15.0%
!! AATTAAAAACTGTAGATAAA+AGG - chr2.2:4602072-4602091 None:intergenic 15.0%
!! ATAAGTTATTGAAAAATAAC+AGG - chr2.2:4601928-4601947 None:intergenic 15.0%
!! ATTTCCATTGTTTAATTAAA+TGG - chr2.2:4603843-4603862 None:intergenic 15.0%
!! GAAGAATCATAAAAAAATTA+AGG + chr2.2:4600808-4600827 MS.gene052055:CDS 15.0%
!! TAAACAATGGAAATTAAATA+AGG + chr2.2:4603849-4603868 MS.gene052055:CDS 15.0%
!! TAAGTTATTGAAAAATAACA+GGG - chr2.2:4601927-4601946 None:intergenic 15.0%
!! TATAATTTCAAAGATATAGT+TGG + chr2.2:4601064-4601083 MS.gene052055:CDS 15.0%
!! TTTCCATTGTTTAATTAAAT+GGG - chr2.2:4603842-4603861 None:intergenic 15.0%
!!! ATGTTAATATTAATGTCTTT+TGG + chr2.2:4602462-4602481 MS.gene052055:intron 15.0%
!!! TTTGATTTTTTAATACTTCA+TGG + chr2.2:4601446-4601465 MS.gene052055:intron 15.0%
!! ACCTAAAATGTAAAACTTTA+TGG - chr2.2:4602898-4602917 None:intergenic 20.0%
!! AGAAACATGTAATATATTTC+TGG + chr2.2:4601671-4601690 MS.gene052055:intron 20.0%
!! ATTAACAATACTAACACAAT+GGG - chr2.2:4600615-4600634 None:intergenic 20.0%
!! CACAAGTAAAAGTAATTAAT+TGG - chr2.2:4603107-4603126 None:intergenic 20.0%
!! GAATCATAAAAAAATTAAGG+AGG + chr2.2:4600811-4600830 MS.gene052055:CDS 20.0%
!! GCTTTCTAATTATTAAGAAA+TGG - chr2.2:4603502-4603521 None:intergenic 20.0%
!! TAGTATTGTTAATGATAAGT+CGG + chr2.2:4600622-4600641 MS.gene052055:CDS 20.0%
!! TGAACTGTTCTAATTAATAT+TGG + chr2.2:4601320-4601339 MS.gene052055:intron 20.0%
!! TTCTTAATAATTAGAAAGCA+TGG + chr2.2:4603503-4603522 MS.gene052055:intron 20.0%
!! TTTCCCATTTAATTAAACAA+TGG + chr2.2:4603836-4603855 MS.gene052055:CDS 20.0%
!!! AATGGTGCATTATATATTTT+AGG - chr2.2:4603484-4603503 None:intergenic 20.0%
!!! CTAAATTTGCTTCTTTAAAA+TGG + chr2.2:4601826-4601845 MS.gene052055:intron 20.0%
!!! TCCATAAAGTTTTACATTTT+AGG + chr2.2:4602894-4602913 MS.gene052055:intron 20.0%
!!! TTTACATTTTAGGTGAAAAT+TGG + chr2.2:4602904-4602923 MS.gene052055:intron 20.0%
!!! TTTTTACTACCATATCATTT+TGG + chr2.2:4601380-4601399 MS.gene052055:intron 20.0%
! AAAACACCGAAAATTTGTAT+TGG - chr2.2:4602765-4602784 None:intergenic 25.0%
! AAAACTTAAGCAGAAATGTA+GGG + chr2.2:4602589-4602608 MS.gene052055:intron 25.0%
! AAAAGTTTGAAGGATGATTT+CGG + chr2.2:4603685-4603704 MS.gene052055:CDS 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG + chr2.2:4603165-4603184 MS.gene052055:CDS 25.0%
! ATCTTATGATGTGAATAACT+TGG + chr2.2:4602830-4602849 MS.gene052055:intron 25.0%
! ATGCTTGAACATTTCAATAA+GGG + chr2.2:4601280-4601299 MS.gene052055:CDS 25.0%
! ATTATTTACTGGAAATTTGC+TGG + chr2.2:4603549-4603568 MS.gene052055:intron 25.0%
! CAAAACAAACAATGAAATCA+TGG - chr2.2:4603083-4603102 None:intergenic 25.0%
! CAATTCAGTTTCTATAACTA+AGG + chr2.2:4602785-4602804 MS.gene052055:intron 25.0%
! CATTAACAATACTAACACAA+TGG - chr2.2:4600616-4600635 None:intergenic 25.0%
! GAAATGTATATTGAAAGCTA+TGG + chr2.2:4600551-4600570 MS.gene052055:CDS 25.0%
! GTTGAACATATATTAGATCA+TGG - chr2.2:4603624-4603643 None:intergenic 25.0%
! TAAAAAGCTGAAAAGTTTGA+AGG + chr2.2:4603675-4603694 MS.gene052055:CDS 25.0%
! TAAAACTTAAGCAGAAATGT+AGG + chr2.2:4602588-4602607 MS.gene052055:intron 25.0%
! TAGGAGATAAATATATCCAA+AGG - chr2.2:4603465-4603484 None:intergenic 25.0%
! TATGGATGAGAAGAAAAAAT+TGG + chr2.2:4602275-4602294 MS.gene052055:CDS 25.0%
! TGATGAAAAAATGATGTCTT+TGG + chr2.2:4602016-4602035 MS.gene052055:CDS 25.0%
! TGTAGTGATCTATTATTTAC+TGG + chr2.2:4603538-4603557 MS.gene052055:intron 25.0%
! TTGTTCACATGTATTTACAA+TGG + chr2.2:4602739-4602758 MS.gene052055:intron 25.0%
! TTTCTTCTCAAAATATAGCT+TGG - chr2.2:4601656-4601675 None:intergenic 25.0%
! TTTGTAAGTGATCAATTTAC+AGG + chr2.2:4601799-4601818 MS.gene052055:intron 25.0%
!! AACTAATCTTTTACAAAGTC+AGG + chr2.2:4602534-4602553 MS.gene052055:intron 25.0%
!! ATACAGCTATTAACTTTTTG+CGG - chr2.2:4602413-4602432 None:intergenic 25.0%
!! ATGTATATGCTTAAGTTTTG+AGG + chr2.2:4602099-4602118 MS.gene052055:intron 25.0%
!! ATTTCTGCTTAAGTTTTACA+AGG - chr2.2:4602586-4602605 None:intergenic 25.0%
!! TAATTAGAAAGCATGGTAAT+TGG + chr2.2:4603510-4603529 MS.gene052055:intron 25.0%
!!! ACTTATTTTGCTTCAAGTTT+AGG - chr2.2:4603031-4603050 None:intergenic 25.0%
!!! GAAATCTTATTTAAGTTGCT+TGG + chr2.2:4602705-4602724 MS.gene052055:intron 25.0%
AAAATTGGAAGCAATCAGAA+TGG + chr2.2:4602290-4602309 MS.gene052055:CDS 30.0%
AAAGTTGTAACTGACAAAGA+AGG + chr2.2:4603357-4603376 MS.gene052055:CDS 30.0%
AAAGTTTGAAGGATGATTTC+GGG + chr2.2:4603686-4603705 MS.gene052055:CDS 30.0%
AAGTTGTAACTGACAAAGAA+GGG + chr2.2:4603358-4603377 MS.gene052055:CDS 30.0%
ACTTATTATGAATGATGCTG+AGG + chr2.2:4600673-4600692 MS.gene052055:CDS 30.0%
ACTTGATATTAAGCCATTTC+TGG + chr2.2:4603191-4603210 MS.gene052055:CDS 30.0%
AGTATCTAAGGATCATGAAA+AGG + chr2.2:4601540-4601559 MS.gene052055:CDS 30.0%
ATATGTTCAACATATCACAC+AGG + chr2.2:4603633-4603652 MS.gene052055:intron 30.0%
CATAATTTCTGTGAAAAGGA+TGG + chr2.2:4603164-4603183 MS.gene052055:CDS 30.0%
CTTATTATGAATGATGCTGA+GGG + chr2.2:4600674-4600693 MS.gene052055:CDS 30.0%
GAGTCATAATTTCTGTGAAA+AGG + chr2.2:4603160-4603179 MS.gene052055:CDS 30.0%
GATGCTTGAACATTTCAATA+AGG + chr2.2:4601279-4601298 MS.gene052055:CDS 30.0%
TAAGCTACACCAAAATGATA+TGG - chr2.2:4601392-4601411 None:intergenic 30.0%
TAGATATTATGAAGACCTGA+AGG + chr2.2:4600364-4600383 MS.gene052055:CDS 30.0%
TGATTTGAATGTTTGCAAAC+AGG - chr2.2:4602678-4602697 None:intergenic 30.0%
TTGTCAGTTACAACTTTGAA+CGG - chr2.2:4603354-4603373 None:intergenic 30.0%
TTTATATGCTGAATATGCTG+AGG - chr2.2:4602443-4602462 None:intergenic 30.0%
TTTGTCACATTGTTTCATAC+TGG + chr2.2:4602983-4603002 MS.gene052055:intron 30.0%
! AAATTCCAAAGTTCTGGTAT+TGG - chr2.2:4603781-4603800 None:intergenic 30.0%
! AATTCCAAAGTTCTGGTATT+GGG - chr2.2:4603780-4603799 None:intergenic 30.0%
! ATCACACAGGAAATTTTAGA+CGG + chr2.2:4603646-4603665 MS.gene052055:intron 30.0%
! ATGATGATGAGTTGTTTGTA+TGG + chr2.2:4600720-4600739 MS.gene052055:CDS 30.0%
! CAAAAAGTGGAAAGTATGTT+GGG + chr2.2:4600786-4600805 MS.gene052055:CDS 30.0%
! CAATGGCCAATACAAATTTT+CGG + chr2.2:4602756-4602775 MS.gene052055:intron 30.0%
! GTTCTGTTTCTTTGATTTAG+AGG + chr2.2:4601344-4601363 MS.gene052055:intron 30.0%
! TAAGAGAGAATTTTCAGAGA+AGG + chr2.2:4603263-4603282 MS.gene052055:CDS 30.0%
! TAATCCTTGTTGTAGCAAAA+CGG - chr2.2:4600440-4600459 None:intergenic 30.0%
! TACAGCTATTAACTTTTTGC+GGG - chr2.2:4602412-4602431 None:intergenic 30.0%
!! CTAACAACACTTTTTGTGAT+TGG - chr2.2:4601853-4601872 None:intergenic 30.0%
!! TTCATACTGGTTCAATCATA+AGG + chr2.2:4602996-4603015 MS.gene052055:intron 30.0%
!! TTGTTGTTTACAGAATGAGA+TGG + chr2.2:4601971-4601990 MS.gene052055:intron 30.0%
!! TTTTTCAAAATCACCATCCA+TGG - chr2.2:4600746-4600765 None:intergenic 30.0%
!!! ACCAGAACTTTGGAATTTTA+GGG + chr2.2:4603783-4603802 MS.gene052055:CDS 30.0%
!!! CAACATACTTTCCACTTTTT+GGG - chr2.2:4600787-4600806 None:intergenic 30.0%
!!! TACCAGAACTTTGGAATTTT+AGG + chr2.2:4603782-4603801 MS.gene052055:CDS 30.0%
!!! TTAAGTTTTGAGGACTCTTT+TGG + chr2.2:4602109-4602128 MS.gene052055:intron 30.0%
AAAATTGGTAGAATCAGGTC+AGG + chr2.2:4602919-4602938 MS.gene052055:intron 35.0%
AAAGTGGGATGACTTTGTTA+AGG + chr2.2:4603314-4603333 MS.gene052055:CDS 35.0%
AAGTTTGAAGGATGATTTCG+GGG + chr2.2:4603687-4603706 MS.gene052055:CDS 35.0%
ACAATGCTATGAAGTTAGAG+AGG + chr2.2:4600942-4600961 MS.gene052055:CDS 35.0%
ACTCATATTGACCCAAAAAG+TGG + chr2.2:4600773-4600792 MS.gene052055:CDS 35.0%
ACTTTATGGACACAAACAAC+TGG - chr2.2:4602884-4602903 None:intergenic 35.0%
AGGTGAAAATTGGTAGAATC+AGG + chr2.2:4602914-4602933 MS.gene052055:intron 35.0%
ATTTGACACAGAAGACCAAA+TGG - chr2.2:4601894-4601913 None:intergenic 35.0%
CATTGGAATTGGAGATAGAA+CGG + chr2.2:4602208-4602227 MS.gene052055:CDS 35.0%
CCAAATTGAACAACTGCAAA+GGG - chr2.2:4600902-4600921 None:intergenic 35.0%
GATTTAGAGGTGAAACATTC+TGG + chr2.2:4601357-4601376 MS.gene052055:intron 35.0%
TCACAAGAAAATTCATGACC+TGG + chr2.2:4602161-4602180 MS.gene052055:CDS 35.0%
TCCAAATTGAACAACTGCAA+AGG - chr2.2:4600903-4600922 None:intergenic 35.0%
TCCCTAAAATTCCAAAGTTC+TGG - chr2.2:4603787-4603806 None:intergenic 35.0%
TCTCTAACTTCATAGCATTG+TGG - chr2.2:4600943-4600962 None:intergenic 35.0%
TGTTAGCATTCCTTACTCTA+TGG + chr2.2:4601867-4601886 MS.gene052055:intron 35.0%
TGTTCAATTTGGAAGAGAGT+GGG + chr2.2:4600910-4600929 MS.gene052055:CDS 35.0%
TTAAATGAGTACAACCCTAG+TGG + chr2.2:4603748-4603767 MS.gene052055:CDS 35.0%
TTCCAGGTAATGAATCACAT+TGG + chr2.2:4602243-4602262 MS.gene052055:CDS 35.0%
TTGTTCAATTTGGAAGAGAG+TGG + chr2.2:4600909-4600928 MS.gene052055:CDS 35.0%
! ACAAAAGTGTGTTCATGAGA+GGG - chr2.2:4601746-4601765 None:intergenic 35.0%
! CATGAACACACTTTTGTGAT+AGG + chr2.2:4601749-4601768 MS.gene052055:intron 35.0%
! CCAAAAAGTGGAAAGTATGT+TGG + chr2.2:4600785-4600804 MS.gene052055:CDS 35.0%
! GCTTACAGTCTGTTACATTT+TGG + chr2.2:4601407-4601426 MS.gene052055:intron 35.0%
! GGGATTTGAAAACTGTTTCT+GGG + chr2.2:4601107-4601126 MS.gene052055:CDS 35.0%
!! ATACCAGGAGAAAGTATCTA+AGG + chr2.2:4601528-4601547 MS.gene052055:CDS 35.0%
!! CCAACATACTTTCCACTTTT+TGG - chr2.2:4600788-4600807 None:intergenic 35.0%
!! TTACTTTTACTTGTGCACAG+TGG + chr2.2:4603112-4603131 MS.gene052055:intron 35.0%
!! TTTGGAATTTTAGGGAAGGA+AGG + chr2.2:4603791-4603810 MS.gene052055:CDS 35.0%
!!! GAACTTTGGAATTTTAGGGA+AGG + chr2.2:4603787-4603806 MS.gene052055:CDS 35.0%
AAAATTCATGACCTGGAGAG+AGG + chr2.2:4602168-4602187 MS.gene052055:CDS 40.0%
AAGGAAAGCGATGGATCAAA+AGG + chr2.2:4601252-4601271 MS.gene052055:CDS 40.0%
AATCATGGCAACAAAGCAAC+AGG - chr2.2:4603068-4603087 None:intergenic 40.0%
AATGATGCTGAGGGTCATTT+GGG + chr2.2:4600683-4600702 MS.gene052055:CDS 40.0%
ACAGGGCAGTAACTTTCAAT+GGG - chr2.2:4600859-4600878 None:intergenic 40.0%
ACCAAATGGTCCATAGAGTA+AGG - chr2.2:4601880-4601899 None:intergenic 40.0%
ACTTTGTTAAGGATCCAAGC+TGG + chr2.2:4603325-4603344 MS.gene052055:CDS 40.0%
AGACATGCATCCAGAATTGT+GGG + chr2.2:4600482-4600501 MS.gene052055:CDS 40.0%
ATGAGTTGTTTGTATGGCCA+TGG + chr2.2:4600726-4600745 MS.gene052055:CDS 40.0%
CATTAGAGATCAGCAAGATG+CGG + chr2.2:4601491-4601510 MS.gene052055:intron 40.0%
CCCTTTGCAGTTGTTCAATT+TGG + chr2.2:4600899-4600918 MS.gene052055:CDS 40.0%
CCTGAAGGATGATTACTACA+AGG + chr2.2:4600379-4600398 MS.gene052055:CDS 40.0%
CCTTGTAGTAATCATCCTTC+AGG - chr2.2:4600382-4600401 None:intergenic 40.0%
CTCCAATGTGATTCATTACC+TGG - chr2.2:4602248-4602267 None:intergenic 40.0%
GAAAAGGAAGAGGAACTAGA+GGG + chr2.2:4602321-4602340 MS.gene052055:CDS 40.0%
GATCCTTAGATACTTTCTCC+TGG - chr2.2:4601534-4601553 None:intergenic 40.0%
GGCAATAGAAGAGCAACAAA+AGG + chr2.2:4601992-4602011 MS.gene052055:CDS 40.0%
GGGGATTTGAAAACTGTTTC+TGG + chr2.2:4601106-4601125 MS.gene052055:CDS 40.0%
GTCTTTGGCTGAAGAACATA+AGG + chr2.2:4602031-4602050 MS.gene052055:CDS 40.0%
GTTCTGTTAAGACACACCTT+TGG + chr2.2:4603446-4603465 MS.gene052055:intron 40.0%
TCACATTGGAGAGACTGATA+TGG + chr2.2:4602257-4602276 MS.gene052055:CDS 40.0%
TCCTTACTCTATGGACCATT+TGG + chr2.2:4601876-4601895 MS.gene052055:intron 40.0%
TGCAAATGAAAGCAATCGAG+TGG + chr2.2:4603286-4603305 MS.gene052055:CDS 40.0%
TTCGTGAAGTTGTTGTACCT+TGG - chr2.2:4603388-4603407 None:intergenic 40.0%
TTGATCCATCGCTTTCCTTA+GGG - chr2.2:4601251-4601270 None:intergenic 40.0%
TTTACTTGTGCACAGTGGAT+TGG + chr2.2:4603117-4603136 MS.gene052055:intron 40.0%
TTTGATCCATCGCTTTCCTT+AGG - chr2.2:4601252-4601271 None:intergenic 40.0%
! CACAAAAGTGTGTTCATGAG+AGG - chr2.2:4601747-4601766 None:intergenic 40.0%
! TGCTGGTGTTAGCACTTATT+TGG + chr2.2:4603566-4603585 MS.gene052055:intron 40.0%
! TTTTCAAATCCCCATTTCCC+TGG - chr2.2:4601099-4601118 None:intergenic 40.0%
!! AGAGGGATTACTTGGCTTTA+CGG + chr2.2:4600990-4601009 MS.gene052055:CDS 40.0%
!! CACGAGCTTGTTCTGATTTT+CGG - chr2.2:4600319-4600338 None:intergenic 40.0%
!! GAATTTTAGGGAAGGAAGGA+AGG + chr2.2:4603795-4603814 MS.gene052055:CDS 40.0%
!! GGTCTTCAGCTTTAAGGTAT+TGG - chr2.2:4601182-4601201 None:intergenic 40.0%
!! TTGTCCTCTAAAGTTCCACA+GGG - chr2.2:4600876-4600895 None:intergenic 40.0%
!! TTTGTCCTCTAAAGTTCCAC+AGG - chr2.2:4600877-4600896 None:intergenic 40.0%
AAAGCTGAAGACCGAGGAAT+TGG + chr2.2:4601189-4601208 MS.gene052055:CDS 45.0%
AAGGAGGAGCTGATCATGAA+CGG + chr2.2:4600827-4600846 MS.gene052055:CDS 45.0%
AATCGAGTGGTGCTCAAAGT+GGG + chr2.2:4603299-4603318 MS.gene052055:CDS 45.0%
ACAAGCTCGTGAGTCTGATT+TGG + chr2.2:4600328-4600347 MS.gene052055:CDS 45.0%
ACTTGATGCCAAACAGGCAT+TGG + chr2.2:4602191-4602210 MS.gene052055:CDS 45.0%
AGATAGACTCTTTGGGTGGA+TGG + chr2.2:4601027-4601046 MS.gene052055:CDS 45.0%
AGGAAGGAAGGCTTCATTGA+AGG + chr2.2:4603807-4603826 MS.gene052055:CDS 45.0%
AGGAAGGCTTCATTGAAGGA+AGG + chr2.2:4603811-4603830 MS.gene052055:CDS 45.0%
ATAGTTGGCAAACACCTCCA+GGG + chr2.2:4601079-4601098 MS.gene052055:CDS 45.0%
ATGACTCGAGCAGTGTTCTT+TGG - chr2.2:4603147-4603166 None:intergenic 45.0%
ATGAGGTGAATGTGTCCCTA+AGG + chr2.2:4601233-4601252 MS.gene052055:CDS 45.0%
ATGAGTACAACCCTAGTGGT+AGG + chr2.2:4603752-4603771 MS.gene052055:CDS 45.0%
CAATTTGGAAGAGAGTGGGA+TGG + chr2.2:4600914-4600933 MS.gene052055:CDS 45.0%
CACAGGGCAGTAACTTTCAA+TGG - chr2.2:4600860-4600879 None:intergenic 45.0%
CAGACCATTAGATGAGCTGA+TGG - chr2.2:4602488-4602507 None:intergenic 45.0%
CATTGAAAGTTACTGCCCTG+TGG + chr2.2:4600858-4600877 MS.gene052055:CDS 45.0%
CGAACTTATTTCCCGTGAGA+AGG + chr2.2:4601591-4601610 MS.gene052055:CDS 45.0%
CTAAGGATCATGAAAAGGCC+AGG + chr2.2:4601545-4601564 MS.gene052055:CDS 45.0%
CTCCAATTCCAATGCCTGTT+TGG - chr2.2:4602202-4602221 None:intergenic 45.0%
CTCTTAGCTGCTTCCAGAAA+TGG - chr2.2:4603207-4603226 None:intergenic 45.0%
CTGTGGTAAGAGGGATTACT+TGG + chr2.2:4600982-4601001 MS.gene052055:CDS 45.0%
GAATGATGCTGAGGGTCATT+TGG + chr2.2:4600682-4600701 MS.gene052055:CDS 45.0%
GACAGCTAGCAAGTATGATG+AGG + chr2.2:4601216-4601235 MS.gene052055:CDS 45.0%
GAGACATGCATCCAGAATTG+TGG + chr2.2:4600481-4600500 MS.gene052055:CDS 45.0%
GGAAAAGGAAGAGGAACTAG+AGG + chr2.2:4602320-4602339 MS.gene052055:CDS 45.0%
GGAAAGAAGCTGAGGACAAT+AGG + chr2.2:4601128-4601147 MS.gene052055:CDS 45.0%
GGAAGATCTTCAACAAACGC+TGG + chr2.2:4602347-4602366 MS.gene052055:CDS 45.0%
GGTACCCAATACCAGAACTT+TGG + chr2.2:4603773-4603792 MS.gene052055:CDS 45.0%
GTATTGGGTACCTACCACTA+GGG - chr2.2:4603765-4603784 None:intergenic 45.0%
GTGTTCATGAGAGGGTCAAA+AGG - chr2.2:4601738-4601757 None:intergenic 45.0%
GTTGTTTGTATGGCCATGGA+TGG + chr2.2:4600730-4600749 MS.gene052055:CDS 45.0%
TACCTTAAAGCTGAAGACCG+AGG + chr2.2:4601183-4601202 MS.gene052055:CDS 45.0%
TATAGTTGGCAAACACCTCC+AGG + chr2.2:4601078-4601097 MS.gene052055:CDS 45.0%
TGACAAAGAAGGGAACTCCA+AGG + chr2.2:4603368-4603387 MS.gene052055:CDS 45.0%
TGACTCGAGCAGTGTTCTTT+GGG - chr2.2:4603146-4603165 None:intergenic 45.0%
TGTTGCTAAGCATTCAGCTC+TGG + chr2.2:4600529-4600548 MS.gene052055:CDS 45.0%
TTCCTCGGTCTTCAGCTTTA+AGG - chr2.2:4601188-4601207 None:intergenic 45.0%
TTGGAGATAGAACGGCTGAA+AGG + chr2.2:4602216-4602235 MS.gene052055:CDS 45.0%
TTGGCCATCAGCTCATCTAA+TGG + chr2.2:4602481-4602500 MS.gene052055:intron 45.0%
TTTCCCTGCTATGAGCTGTA+TGG + chr2.2:4603597-4603616 MS.gene052055:intron 45.0%
! CTGTCCGTTTTGCTACAACA+AGG + chr2.2:4600433-4600452 MS.gene052055:CDS 45.0%
! GCAAGTTGAACGTGAATACC+AGG + chr2.2:4601513-4601532 MS.gene052055:CDS 45.0%
! TCAACAAACGCTGGTTGTTC+AGG + chr2.2:4602356-4602375 MS.gene052055:CDS 45.0%
!! GAGGGATTACTTGGCTTTAC+GGG + chr2.2:4600991-4601010 MS.gene052055:CDS 45.0%
!! TGCCAAACAGGCATTGGAAT+TGG + chr2.2:4602197-4602216 MS.gene052055:CDS 45.0%
!! TGTTTCTGGGAAAGAAGCTG+AGG + chr2.2:4601120-4601139 MS.gene052055:CDS 45.0%
AAAGCGAGGAAGCTTCTCTC+TGG + chr2.2:4601151-4601170 MS.gene052055:CDS 50.0%
AATTGTGGGTGACTCAGGTG+AGG + chr2.2:4600496-4600515 MS.gene052055:CDS 50.0%
ACCTGAGTCACCCACAATTC+TGG - chr2.2:4600495-4600514 None:intergenic 50.0%
ACTGCCCTGTGGAACTTTAG+AGG + chr2.2:4600869-4600888 MS.gene052055:CDS 50.0%
ACTTTGAACGGATGCCAGCT+TGG - chr2.2:4603342-4603361 None:intergenic 50.0%
AGCAATCAGAATGGAGCTGC+AGG + chr2.2:4602299-4602318 MS.gene052055:CDS 50.0%
AGCGGGGAGATAGACTCTTT+GGG + chr2.2:4601020-4601039 MS.gene052055:CDS 50.0%
AGCTGTCTGCTCCAATTCCT+CGG - chr2.2:4601203-4601222 None:intergenic 50.0%
AGGAGGAGCTGATCATGAAC+GGG + chr2.2:4600828-4600847 MS.gene052055:CDS 50.0%
CAAACACCTCCAGGGAAATG+GGG + chr2.2:4601087-4601106 MS.gene052055:CDS 50.0%
CAATCGAGTGGTGCTCAAAG+TGG + chr2.2:4603298-4603317 MS.gene052055:CDS 50.0%
CAGAATGGAGCTGCAGGAAA+AGG + chr2.2:4602305-4602324 MS.gene052055:CDS 50.0%
CTGAGGACAATAGGAAAGCG+AGG + chr2.2:4601137-4601156 MS.gene052055:CDS 50.0%
CTTCTGCAGATCCTTCTCAC+GGG - chr2.2:4601605-4601624 None:intergenic 50.0%
GAAGGATGATTTCGGGGATG+AGG + chr2.2:4603693-4603712 MS.gene052055:CDS 50.0%
GAGAGGACTTGATGCCAAAC+AGG + chr2.2:4602185-4602204 MS.gene052055:CDS 50.0%
GAGGAAGCTTCTCTCTGGTT+TGG + chr2.2:4601156-4601175 MS.gene052055:CDS 50.0%
GCAAACACCTCCAGGGAAAT+GGG + chr2.2:4601086-4601105 MS.gene052055:CDS 50.0%
GCTTCTGCAGATCCTTCTCA+CGG - chr2.2:4601606-4601625 None:intergenic 50.0%
GGTCCATACAGCTCATAGCA+GGG - chr2.2:4603603-4603622 None:intergenic 50.0%
TCAAATCCCCATTTCCCTGG+AGG - chr2.2:4601096-4601115 None:intergenic 50.0%
TCCAGAATTGTGGGTGACTC+AGG + chr2.2:4600491-4600510 MS.gene052055:CDS 50.0%
TGGTCCATACAGCTCATAGC+AGG - chr2.2:4603604-4603623 None:intergenic 50.0%
TGTGTCCCTAAGGAAAGCGA+TGG + chr2.2:4601243-4601262 MS.gene052055:CDS 50.0%
! GGTATTGGGTACCTACCACT+AGG - chr2.2:4603766-4603785 None:intergenic 50.0%
! TGCAGTAGCTACAGCTCTGA+AGG + chr2.2:4603723-4603742 MS.gene052055:CDS 50.0%
!! AAGCAGAGCACTGTGGTAAG+AGG + chr2.2:4600972-4600991 MS.gene052055:CDS 50.0%
!! AGCAGAGCACTGTGGTAAGA+GGG + chr2.2:4600973-4600992 MS.gene052055:CDS 50.0%
!! AGCTTTCAAGCAGAGCACTG+TGG + chr2.2:4600965-4600984 MS.gene052055:CDS 50.0%
!! TTACTTGGCTTTACGGGAGC+AGG + chr2.2:4600997-4601016 MS.gene052055:CDS 50.0%
ACGGCTGAAAGGAGCTTTCC+AGG + chr2.2:4602227-4602246 MS.gene052055:CDS 55.0%
CCAGGCTGGAACTAGAAGCT+CGG + chr2.2:4601563-4601582 MS.gene052055:CDS 55.0%
GAGCGGGGAGATAGACTCTT+TGG + chr2.2:4601019-4601038 MS.gene052055:CDS 55.0%
GCAAAACGGACAGCGAAACG+TGG - chr2.2:4600426-4600445 None:intergenic 55.0%
GGAAGAGGAACTAGAGGGTG+TGG + chr2.2:4602326-4602345 MS.gene052055:CDS 55.0%
GGAGCTGCAGGAAAAGGAAG+AGG + chr2.2:4602311-4602330 MS.gene052055:CDS 55.0%
GGATCATGAAAAGGCCAGGC+TGG + chr2.2:4601549-4601568 MS.gene052055:CDS 55.0%
GGCAAACACCTCCAGGGAAA+TGG + chr2.2:4601085-4601104 MS.gene052055:CDS 55.0%
GGGGAGATAGACTCTTTGGG+TGG + chr2.2:4601023-4601042 MS.gene052055:CDS 55.0%
TGGCATCAAGTCCTCTCTCC+AGG - chr2.2:4602182-4602201 None:intergenic 55.0%
GGCTGGAACTAGAAGCTCGG+AGG + chr2.2:4601566-4601585 MS.gene052055:CDS 60.0%
! TGGCTTTACGGGAGCAGGAG+CGG + chr2.2:4601002-4601021 MS.gene052055:CDS 60.0%
!! CCGAGCTTCTAGTTCCAGCC+TGG - chr2.2:4601566-4601585 None:intergenic 60.0%
GCTTTACGGGAGCAGGAGCG+GGG + chr2.2:4601004-4601023 MS.gene052055:CDS 65.0%
GGCTTTACGGGAGCAGGAGC+GGG + chr2.2:4601003-4601022 MS.gene052055:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 4600311 4603888 4600311 ID=MS.gene052055
chr2.2 mRNA 4600311 4603888 4600311 ID=MS.gene052055.t1;Parent=MS.gene052055
chr2.2 exon 4600311 4601301 4600311 ID=MS.gene052055.t1.exon1;Parent=MS.gene052055.t1
chr2.2 CDS 4600311 4601301 4600311 ID=cds.MS.gene052055.t1;Parent=MS.gene052055.t1
chr2.2 exon 4601497 4601678 4601497 ID=MS.gene052055.t1.exon2;Parent=MS.gene052055.t1
chr2.2 CDS 4601497 4601678 4601497 ID=cds.MS.gene052055.t1;Parent=MS.gene052055.t1
chr2.2 exon 4601984 4602052 4601984 ID=MS.gene052055.t1.exon3;Parent=MS.gene052055.t1
chr2.2 CDS 4601984 4602052 4601984 ID=cds.MS.gene052055.t1;Parent=MS.gene052055.t1
chr2.2 exon 4602144 4602428 4602144 ID=MS.gene052055.t1.exon4;Parent=MS.gene052055.t1
chr2.2 CDS 4602144 4602428 4602144 ID=cds.MS.gene052055.t1;Parent=MS.gene052055.t1
chr2.2 exon 4603132 4603389 4603132 ID=MS.gene052055.t1.exon5;Parent=MS.gene052055.t1
chr2.2 CDS 4603132 4603389 4603132 ID=cds.MS.gene052055.t1;Parent=MS.gene052055.t1
chr2.2 exon 4603655 4603888 4603655 ID=MS.gene052055.t1.exon6;Parent=MS.gene052055.t1
chr2.2 CDS 4603655 4603888 4603655 ID=cds.MS.gene052055.t1;Parent=MS.gene052055.t1
Gene Sequence

>MS.gene052055

ATGTACCGAAAATCAGAACAAGCTCGTGAGTCTGATTTGGAGTACTACAAGCGTAGATATTATGAAGACCTGAAGGATGATTACTACAAGGAAACGCTCAAAATCTCTGATTCCACGTTTCGCTGTCCGTTTTGCTACAACAAGGATTACTACTCTTTGAGTGAGCTATTGAGACATGCATCCAGAATTGTGGGTGACTCAGGTGAGGCAGTTAAAGATGTTGCTAAGCATTCAGCTCTGGAAATGTATATTGAAAGCTATGGTGATAAGTTAACTGCTGTTACTATTGATAATGATAAGACCCATTGTGTTAGTATTGTTAATGATAAGTCGGTTAATTTGAGTATCGCTAATGAGAAGTCACTTATTATGAATGATGCTGAGGGTCATTTGGGTAATGTGAATGTTGATGATGATGAGTTGTTTGTATGGCCATGGATGGTGATTTTGAAAAATATTGTTACTCATATTGACCCAAAAAGTGGAAAGTATGTTGGGAAGAATCATAAAAAAATTAAGGAGGAGCTGATCATGAACGGGTTTCACCCATTGAAAGTTACTGCCCTGTGGAACTTTAGAGGACAAACACCCTTTGCAGTTGTTCAATTTGGAAGAGAGTGGGATGGTTTCCACAATGCTATGAAGTTAGAGAGGAGCTTTCAAGCAGAGCACTGTGGTAAGAGGGATTACTTGGCTTTACGGGAGCAGGAGCGGGGAGATAGACTCTTTGGGTGGATGGCACGTCGTGATGACTATAATTTCAAAGATATAGTTGGCAAACACCTCCAGGGAAATGGGGATTTGAAAACTGTTTCTGGGAAAGAAGCTGAGGACAATAGGAAAGCGAGGAAGCTTCTCTCTGGTTTGGCCAATACCTTAAAGCTGAAGACCGAGGAATTGGAGCAGACAGCTAGCAAGTATGATGAGGTGAATGTGTCCCTAAGGAAAGCGATGGATCAAAAGGAAAAGATGCTTGAACATTTCAATAAGGGTATGTTGATAGTTAAACTGAACTGTTCTAATTAATATTGGTGTTCTGTTTCTTTGATTTAGAGGTGAAACATTCTGGTTTTTACTACCATATCATTTTGGTGTAGCTTACAGTCTGTTACATTTTGGAATGATTTGTAGTTGATTTGATTTTTTAATACTTCATGGTAGCTTCTGTTTTATATTGTTTCATTAGAGATCAGCAAGATGCGGCAAGTTGAACGTGAATACCAGGAGAAAGTATCTAAGGATCATGAAAAGGCCAGGCTGGAACTAGAAGCTCGGAGGAACGAACTTATTTCCCGTGAGAAGGATCTGCAGAAGCGTGAAGCAGATAATCACAATGAGAAAACCAAGCTATATTTTGAGAAGAAACATGTAATATATTTCTGGTCTTTTAATTTATGATAGCAATGCTAAATGAATTATTCTTTCCTTTTGACCCTCTCATGAACACACTTTTGTGATAGGTCAATTTCTAAAATTTTAACACATTTCTTTGTAAGTGATCAATTTACAGGAGAACTAAATTTGCTTCTTTAAAATGGACCAATCACAAAAAGTGTTGTTAGCATTCCTTACTCTATGGACCATTTGGTCTTCTGTGTCAAATGTTTTACACTCCCTGTTATTTTTCAATAACTTATGCAGATTAAATCTGTTCTTCATCTTGTTGTTTACAGAATGAGATGGCAATAGAAGAGCAACAAAAGGCTGATGAAAAAATGATGTCTTTGGCTGAAGAACATAAGGCACGCATTTCATTTTCCTTTTATCTACAGTTTTTAATTCAGTTGCATGTATATGCTTAAGTTTTGAGGACTCTTTTGGTTGATGTTGCAGAAAGAAAAAGAGAAACTTCACAAGAAAATTCATGACCTGGAGAGAGGACTTGATGCCAAACAGGCATTGGAATTGGAGATAGAACGGCTGAAAGGAGCTTTCCAGGTAATGAATCACATTGGAGAGACTGATATGGATGAGAAGAAAAAATTGGAAGCAATCAGAATGGAGCTGCAGGAAAAGGAAGAGGAACTAGAGGGTGTGGAAGATCTTCAACAAACGCTGGTTGTTCAGGAGCGCAAAACTAATGACGAATTGCAAGATGCCCGCAAAAAGTTAATAGCTGTATGTATCTTCCTCAGCATATTCAGCATATAAATGTTAATATTAATGTCTTTTGGCCATCAGCTCATCTAATGGTCTGAAAATCAACTTTAAAATGTCTTCTGTAACTAATCTTTTACAAAGTCAGGATAGATTGTTTTATTTGTATAAATTGCCTTGTAAAACTTAAGCAGAAATGTAGGGTCATTTATATTTTTTAATTGACATACAACTGTTTATATAAAAATGCTACTGAAAGAAAAGTGTCCTGTTTGCAAACATTCAAATCATGTAGTTGAAATCTTATTTAAGTTGCTTGGAAGACAATGTCTTGTTCACATGTATTTACAATGGCCAATACAAATTTTCGGTGTTTTCAATTCAGTTTCTATAACTAAGGAATTTCACTTTATCAGCGTATCATCTTATGATGTGAATAACTTGGTTGCTTGTCTAAACTGTCTATTAACTATCCAGTTGTTTGTGTCCATAAAGTTTTACATTTTAGGTGAAAATTGGTAGAATCAGGTCAGGTCTACGAAAAGAGCAGATTTTGTTTTTACATTTTCAGTTAATTTGTCACATTGTTTCATACTGGTTCAATCATAAGGTATCTGATGCCTAAACTTGAAGCAAAATAAGTTCAAGCAGTTTGTTCCTGTTGCTTTGTTGCCATGATTTCATTGTTTGTTTTGTCCAATTAATTACTTTTACTTGTGCACAGTGGATTGGCTGCCCAAAGAACACTGCTCGAGTCATAATTTCTGTGAAAAGGATGGGCGAACTTGATATTAAGCCATTTCTGGAAGCAGCTAAGAGAAAATTTTCTGATGAAATGAATGAGAAAGCAGTAACTAAGAGAGAATTTTCAGAGAAGGTGCAAATGAAAGCAATCGAGTGGTGCTCAAAGTGGGATGACTTTGTTAAGGATCCAAGCTGGCATCCGTTCAAAGTTGTAACTGACAAAGAAGGGAACTCCAAGGTACAACAACTTCACGAATTATGTTTGTTCGTTAAAATTAATATTTTTTCTCAACTGTTCTGTTAAGACACACCTTTGGATATATTTATCTCCTAAAATATATAATGCACCATTTCTTAATAATTAGAAAGCATGGTAATTGGTATTGTGTAGTGATCTATTATTTACTGGAAATTTGCTGGTGTTAGCACTTATTTGGCATGTTTGTTTCCCTGCTATGAGCTGTATGGACCATGATCTAATATATGTTCAACATATCACACAGGAAATTTTAGACGGAGAAGATAAAAAGCTGAAAAGTTTGAAGGATGATTTCGGGGATGAGGTGCATGATGCAGTAGCTACAGCTCTGAAGGAGTTAAATGAGTACAACCCTAGTGGTAGGTACCCAATACCAGAACTTTGGAATTTTAGGGAAGGAAGGAAGGCTTCATTGAAGGAAGGTGTTTCCCATTTAATTAAACAATGGAAATTAAATAAGGGAAAGAAAGCTTATTGA
Protein sequence

>MS.gene052055.t1

MYRKSEQARESDLEYYKRRYYEDLKDDYYKETLKISDSTFRCPFCYNKDYYSLSELLRHASRIVGDSGEAVKDVAKHSALEMYIESYGDKLTAVTIDNDKTHCVSIVNDKSVNLSIANEKSLIMNDAEGHLGNVNVDDDELFVWPWMVILKNIVTHIDPKSGKYVGKNHKKIKEELIMNGFHPLKVTALWNFRGQTPFAVVQFGREWDGFHNAMKLERSFQAEHCGKRDYLALREQERGDRLFGWMARRDDYNFKDIVGKHLQGNGDLKTVSGKEAEDNRKARKLLSGLANTLKLKTEELEQTASKYDEVNVSLRKAMDQKEKMLEHFNKEISKMRQVEREYQEKVSKDHEKARLELEARRNELISREKDLQKREADNHNEKTKLYFEKKHNEMAIEEQQKADEKMMSLAEEHKKEKEKLHKKIHDLERGLDAKQALELEIERLKGAFQVMNHIGETDMDEKKKLEAIRMELQEKEEELEGVEDLQQTLVVQERKTNDELQDARKKLIAWIGCPKNTARVIISVKRMGELDIKPFLEAAKRKFSDEMNEKAVTKREFSEKVQMKAIEWCSKWDDFVKDPSWHPFKVVTDKEGNSKEILDGEDKKLKSLKDDFGDEVHDAVATALKELNEYNPSGRYPIPELWNFREGRKASLKEGVSHLIKQWKLNKGKKAY