AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052060.t1 MTR_2g097960 97.254 437 2 2 1 436 1 428 0.0 874
MS.gene052060.t1 MTR_4g131970 55.313 367 123 7 8 367 67 399 7.71e-130 381
MS.gene052060.t1 MTR_2g022950 53.646 384 117 9 6 371 51 391 1.47e-124 367
MS.gene052060.t1 MTR_4g086600 56.678 307 114 4 12 313 113 405 1.09e-120 359
MS.gene052060.t1 MTR_1g020080 50.681 367 139 6 13 374 95 424 6.32e-120 356
MS.gene052060.t1 MTR_3g101370 50.535 374 142 7 6 374 84 419 3.33e-119 354
MS.gene052060.t1 MTR_2g022950 70.968 186 52 1 6 189 51 236 1.16e-91 278
MS.gene052060.t1 MTR_2g022950 70.968 186 52 1 6 189 51 236 2.46e-91 278
MS.gene052060.t1 MTR_3g101370 63.874 191 68 1 6 195 84 274 1.13e-85 264
MS.gene052060.t1 MTR_1g020080 63.736 182 66 0 13 194 95 276 1.41e-82 256
MS.gene052060.t1 MTR_3g109090 29.841 315 195 7 14 322 43 337 5.05e-36 137
MS.gene052060.t1 MTR_3g109090 29.841 315 195 7 14 322 59 353 6.58e-36 137
MS.gene052060.t1 MTR_4g124940 31.329 316 188 9 14 322 45 338 2.55e-35 135
MS.gene052060.t1 MTR_8g022050 31.922 307 183 12 14 316 61 345 2.29e-32 127
MS.gene052060.t1 MTR_7g102730 25.076 331 191 8 16 339 11 291 5.01e-27 114
MS.gene052060.t1 MTR_7g102730 25.559 313 189 10 14 318 97 373 1.51e-20 94.7
MS.gene052060.t1 MTR_1g061870 25.402 311 179 7 16 321 16 278 3.48e-26 111
MS.gene052060.t1 MTR_3g065190 32.203 177 114 3 16 192 26 196 5.25e-24 103
MS.gene052060.t1 MTR_1g097440 22.912 419 227 10 16 345 31 442 1.14e-23 104
MS.gene052060.t1 MTR_1g019150 23.939 330 197 8 16 339 33 314 4.57e-23 102
MS.gene052060.t1 MTR_1g019150 24.537 216 146 5 10 212 206 417 1.20e-13 73.6
MS.gene052060.t1 MTR_1g056520 29.268 205 133 4 1 196 94 295 1.27e-22 98.2
MS.gene052060.t1 MTR_4g085540 24.272 309 181 8 16 319 35 295 9.38e-21 95.5
MS.gene052060.t1 MTR_4g085540 25.962 208 140 5 16 212 214 418 3.11e-15 78.2
MS.gene052060.t1 MTR_1g045510 31.148 183 114 5 13 190 110 285 3.15e-20 90.9
MS.gene052060.t1 MTR_3g075500 31.868 182 115 4 17 192 111 289 2.42e-19 88.2
MS.gene052060.t1 MTR_3g102040 25.517 290 163 8 16 300 25 266 3.43e-19 90.5
MS.gene052060.t1 MTR_3g102040 24.766 214 147 5 13 215 201 411 5.35e-14 74.3
MS.gene052060.t1 MTR_6g040190 23.123 333 198 9 13 339 23 303 6.51e-19 89.7
MS.gene052060.t1 MTR_4g104470 29.231 195 115 6 4 188 114 295 1.22e-18 86.3
MS.gene052060.t1 MTR_7g106440 25.806 186 123 3 17 190 111 293 4.74e-18 85.1
MS.gene052060.t1 MTR_3g075500 32.716 162 100 4 17 172 111 269 2.02e-17 82.4
MS.gene052060.t1 MTR_1g064230 32.143 196 107 6 17 189 86 278 6.43e-17 81.3
MS.gene052060.t1 MTR_1g064230 26.695 236 137 6 94 319 70 279 4.29e-11 63.9
MS.gene052060.t1 MTR_7g053230 53.968 63 28 1 230 291 1 63 2.39e-14 67.8
MS.gene052060.t1 MTR_1g080150 37.931 87 53 1 107 193 131 216 3.55e-14 72.4
MS.gene052060.t1 MTR_6g004810 27.746 173 119 2 17 189 47 213 1.70e-13 72.0
MS.gene052060.t1 MTR_3g079200 37.000 100 57 2 238 336 224 318 2.93e-13 72.0
MS.gene052060.t1 MTR_3g055990 27.225 191 122 5 12 191 3 187 2.25e-12 68.9
MS.gene052060.t1 MTR_3g055990 27.225 191 122 5 12 191 3 187 2.40e-12 68.9
MS.gene052060.t1 MTR_2g026180 27.568 185 115 5 17 188 6 184 3.58e-12 68.6
MS.gene052060.t1 MTR_3g084040 41.250 80 45 2 110 189 38 115 3.21e-11 61.6
MS.gene052060.t1 MTR_5g097580 27.660 188 115 6 17 191 8 187 3.68e-11 65.5
MS.gene052060.t1 MTR_5g097580 27.660 188 115 6 17 191 8 187 5.24e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052060.t1 AT5G19350 68.822 433 109 9 4 433 13 422 0.0 560
MS.gene052060.t1 AT5G19350 68.591 433 106 10 4 433 13 418 0.0 555
MS.gene052060.t1 AT5G54900 53.352 358 123 5 6 357 51 370 2.54e-122 361
MS.gene052060.t1 AT1G11650 52.557 352 127 6 7 357 54 366 2.94e-118 351
MS.gene052060.t1 AT1G47490 50.535 374 146 8 6 374 92 431 4.05e-114 342
MS.gene052060.t1 AT1G49600 50.716 349 141 4 12 359 116 434 8.18e-114 341
MS.gene052060.t1 AT1G47500 51.337 374 143 9 6 374 94 433 2.32e-113 340
MS.gene052060.t1 AT3G19130 53.268 306 127 3 9 313 102 392 1.40e-112 338
MS.gene052060.t1 AT4G27000 53.333 315 118 1 8 322 73 358 1.36e-111 335
MS.gene052060.t1 AT1G49600 54.934 304 114 3 12 313 116 398 1.03e-110 333
MS.gene052060.t1 AT1G49600 54.934 304 114 3 12 313 116 398 1.03e-110 333
MS.gene052060.t1 AT1G11650 55.674 282 95 3 7 287 54 306 3.27e-105 314
MS.gene052060.t1 AT1G47500 62.176 193 70 2 6 195 94 286 1.48e-80 251
MS.gene052060.t1 AT1G47490 61.140 193 72 2 6 195 92 284 1.14e-79 249
MS.gene052060.t1 AT1G54080 32.353 306 183 9 14 316 62 346 7.20e-37 140
MS.gene052060.t1 AT3G14100 32.353 306 183 9 14 316 58 342 8.10e-37 140
MS.gene052060.t1 AT1G54080 32.258 310 182 10 14 316 62 350 6.78e-36 137
MS.gene052060.t1 AT1G17370 31.596 307 184 10 14 316 53 337 2.22e-34 133
MS.gene052060.t1 AT1G17370 31.270 307 182 10 14 316 53 334 2.92e-34 132
MS.gene052060.t1 AT1G22760 25.806 310 178 8 16 320 50 312 6.30e-24 105
MS.gene052060.t1 AT1G22760 26.738 187 119 5 16 189 230 411 4.14e-13 71.6
MS.gene052060.t1 AT2G36660 25.402 311 177 10 16 321 25 285 8.28e-23 101
MS.gene052060.t1 AT1G71770 24.194 310 183 9 16 320 60 322 2.15e-22 100
MS.gene052060.t1 AT1G71770 25.134 187 122 5 16 189 240 421 6.58e-12 68.2
MS.gene052060.t1 AT1G71770 24.194 310 183 9 16 320 60 322 2.15e-22 100
MS.gene052060.t1 AT1G71770 25.134 187 122 5 16 189 240 421 6.58e-12 68.2
MS.gene052060.t1 AT3G52380 30.052 193 119 4 9 189 111 299 3.50e-22 97.4
MS.gene052060.t1 AT1G49760 24.625 333 193 8 16 338 46 330 9.76e-22 98.6
MS.gene052060.t1 AT1G49760 27.568 185 120 4 16 189 225 406 1.26e-13 73.6
MS.gene052060.t1 AT1G49760 24.625 333 193 8 16 338 46 330 9.76e-22 98.6
MS.gene052060.t1 AT1G49760 27.568 185 120 4 16 189 225 406 1.26e-13 73.6
MS.gene052060.t1 AT2G18510 28.959 221 147 6 16 234 26 238 1.11e-21 96.3
MS.gene052060.t1 AT4G34110 23.529 289 168 6 16 299 37 277 8.18e-21 95.5
MS.gene052060.t1 AT4G34110 26.570 207 138 5 16 211 216 419 1.57e-14 76.3
MS.gene052060.t1 AT5G50250 33.143 175 111 3 17 188 115 286 1.39e-20 92.0
MS.gene052060.t1 AT4G24770 33.516 182 118 3 8 188 144 323 3.97e-20 91.3
MS.gene052060.t1 AT4G24770 33.516 182 118 3 8 188 144 323 3.97e-20 91.3
MS.gene052060.t1 AT1G60000 30.899 178 111 4 17 189 87 257 1.27e-19 88.6
MS.gene052060.t1 AT3G16380 24.437 311 184 6 16 321 22 286 2.96e-18 87.4
MS.gene052060.t1 AT2G23350 25.172 290 164 7 16 300 47 288 4.27e-18 87.4
MS.gene052060.t1 AT2G23350 26.486 185 122 5 16 189 226 407 5.22e-13 71.6
MS.gene052060.t1 AT2G37220 29.897 194 111 4 17 188 93 283 5.14e-18 84.3
MS.gene052060.t1 AT2G33410 30.890 191 109 6 17 191 8 191 7.67e-17 82.4
MS.gene052060.t1 AT3G13224 29.944 177 120 2 14 190 9 181 1.45e-15 78.2
MS.gene052060.t1 AT3G52150 28.358 201 117 5 4 185 61 253 3.64e-15 75.5
MS.gene052060.t1 AT3G52150 28.358 201 117 5 4 185 61 253 3.64e-15 75.5
MS.gene052060.t1 AT3G13224 29.885 174 118 2 17 190 21 190 8.40e-15 75.9
MS.gene052060.t1 AT4G14300 31.210 157 92 4 17 160 8 161 3.83e-14 74.3
MS.gene052060.t1 AT4G14300 31.210 157 92 4 17 160 8 161 3.83e-14 74.3
MS.gene052060.t1 AT1G17640 27.322 183 112 3 17 190 68 238 1.52e-13 72.0
MS.gene052060.t1 AT1G17640 27.322 183 112 3 17 190 68 238 1.52e-13 72.0
MS.gene052060.t1 AT1G17640 27.322 183 112 3 17 190 68 238 1.52e-13 72.0
MS.gene052060.t1 AT5G40490 26.064 188 125 5 6 189 33 210 1.54e-13 72.4
MS.gene052060.t1 AT4G16280 25.359 209 147 5 17 221 122 325 2.17e-13 72.4
MS.gene052060.t1 AT4G16280 25.359 209 147 5 17 221 47 250 2.74e-13 72.4
MS.gene052060.t1 AT4G16280 25.359 209 147 5 17 221 122 325 2.96e-13 72.4
MS.gene052060.t1 AT1G48920 27.841 176 102 7 15 172 297 465 3.89e-13 71.6
MS.gene052060.t1 AT5G40490 28.221 163 104 4 30 189 41 193 6.65e-13 70.5
MS.gene052060.t1 AT3G04500 37.647 85 52 1 107 191 136 219 7.60e-13 68.6
MS.gene052060.t1 AT4G13850 39.506 81 48 1 110 190 37 116 8.89e-13 65.5
MS.gene052060.t1 AT4G13850 39.506 81 48 1 110 190 37 116 1.26e-12 65.5
MS.gene052060.t1 AT3G13224 30.000 160 102 3 17 173 21 173 1.74e-12 67.4
MS.gene052060.t1 AT4G13850 40.506 79 46 1 110 188 37 114 2.92e-12 64.7
MS.gene052060.t1 AT4G13850 40.506 79 46 1 110 188 37 114 3.25e-12 64.7
MS.gene052060.t1 AT3G23830 40.741 81 47 1 110 190 37 116 7.50e-12 63.2
MS.gene052060.t1 AT3G23830 40.741 81 47 1 110 190 37 116 7.50e-12 63.2
MS.gene052060.t1 AT5G47620 27.273 187 119 6 13 188 4 184 1.55e-11 66.2
MS.gene052060.t1 AT5G47620 27.273 187 119 6 13 188 4 184 1.55e-11 66.2
MS.gene052060.t1 AT5G47620 27.273 187 119 6 13 188 4 184 1.55e-11 66.2
MS.gene052060.t1 AT4G39260 37.209 86 53 1 107 192 5 89 1.64e-11 60.8
MS.gene052060.t1 AT2G29580 34.066 91 59 1 238 327 224 314 1.83e-11 66.2
MS.gene052060.t1 AT5G55550 26.289 194 122 5 13 191 4 191 1.91e-11 66.2
MS.gene052060.t1 AT5G55550 26.289 194 122 5 13 191 4 191 1.91e-11 66.2
MS.gene052060.t1 AT5G55550 26.289 194 122 5 13 191 4 191 1.91e-11 66.2
MS.gene052060.t1 AT5G55550 26.289 194 122 5 13 191 4 191 1.91e-11 66.2
MS.gene052060.t1 AT5G55550 26.289 194 122 5 13 191 4 191 1.91e-11 66.2
MS.gene052060.t1 AT2G35410 27.072 181 112 6 15 182 95 268 2.75e-11 64.7
MS.gene052060.t1 AT5G55550 26.289 194 122 5 13 191 4 191 2.76e-11 65.9
MS.gene052060.t1 AT5G55550 26.289 194 122 5 13 191 4 191 2.76e-11 65.9
MS.gene052060.t1 AT5G55550 26.289 194 122 5 13 191 4 191 2.76e-11 65.9
MS.gene052060.t1 AT5G55550 26.289 194 122 5 13 191 4 191 2.76e-11 65.9
MS.gene052060.t1 AT1G07360 34.177 79 51 1 238 315 224 302 5.05e-11 65.1
MS.gene052060.t1 AT4G39260 39.241 79 47 1 107 185 5 82 7.25e-11 60.1

Find 144 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGATTTATGTTGGTAATT+TGG 0.120731 2.2:+4667549 MS.gene052060:intron
AACAAACCTTCCGTTTAAAC+TGG 0.249900 2.2:+4664360 MS.gene052060:CDS
AAATACCTGTCTAGCTGTTT+GGG 0.286831 2.2:-4667999 None:intergenic
CCAGAGGGACCGCCCTAAAA+TGG 0.305529 2.2:-4669408 None:intergenic
AAAATACCTGTCTAGCTGTT+TGG 0.327900 2.2:-4668000 None:intergenic
TTCGATATTTGTGGGTGATT+TGG 0.328238 2.2:+4664430 MS.gene052060:CDS
GTATTGTTTACATCGTATTC+TGG 0.332261 2.2:-4667454 None:intergenic
AACAAAACCACATGCTTTGC+CGG 0.335534 2.2:-4667647 None:intergenic
CGTTTAAACTGGGCTTCCTT+TGG 0.342734 2.2:+4664371 MS.gene052060:CDS
GGATAGGCGATTTACAATAC+TGG 0.352727 2.2:+4664159 MS.gene052060:CDS
ACAAATGATCCGAGTTTCTT+GGG 0.352764 2.2:+4667970 MS.gene052060:CDS
AGTCAATGGAGTGCATACTA+TGG 0.359233 2.2:+4668783 MS.gene052060:CDS
TTATATAACTTACCTGTTGC+GGG 0.367839 2.2:-4668899 None:intergenic
CCCTTACTCCTCCCAGTATT+CGG 0.368992 2.2:-4664536 None:intergenic
GAATGATCTGGACCCGCATC+AGG 0.383874 2.2:-4664410 None:intergenic
TCGATGAAACCATAACCTTC+TGG 0.386586 2.2:-4664269 None:intergenic
GGTTATGAAGCTTATGCATA+TGG 0.389478 2.2:+4668819 MS.gene052060:CDS
AACAAATGATCCGAGTTTCT+TGG 0.398247 2.2:+4667969 MS.gene052060:CDS
AAGATGCAGGGAAAGATATT+AGG 0.405827 2.2:+4667944 MS.gene052060:CDS
TTTGTTATACCTTTAGGAAC+AGG 0.406458 2.2:-4664749 None:intergenic
GTTGTGACTGATCCGAATAC+TGG 0.406476 2.2:+4664524 MS.gene052060:CDS
CGAACTTCTTCGAGGGATGC+TGG 0.408501 2.2:-4664128 None:intergenic
ACCGGTCAACCAGAAGGTTA+TGG 0.411937 2.2:+4664260 MS.gene052060:CDS
CAAAGGAAGCCCAGTTTAAA+CGG 0.412622 2.2:-4664370 None:intergenic
CGGAAGGTTTGTTCGGTACC+AGG 0.416453 2.2:-4664350 None:intergenic
TCTGGTGGAACTGTATTCAC+TGG 0.419641 2.2:-4667436 None:intergenic
TCCAGATCATTCGATATTTG+TGG 0.424256 2.2:+4664421 MS.gene052060:CDS
TGATTTGGCTCCGGATGTTA+CGG 0.425043 2.2:+4664445 MS.gene052060:CDS
CTTTCCCTGCATCTTCTGAA+TGG 0.425808 2.2:-4667936 None:intergenic
ACCTGGAGGATGGGGACAAC+AGG 0.425840 2.2:+4668752 MS.gene052060:CDS
GCGATGAGAGTGAGAGGAAT+CGG 0.427812 2.2:+4664579 MS.gene052060:CDS
ACAGGAGCAGCAGCAACAAC+AGG 0.430443 2.2:-4664731 None:intergenic
ACCTGTTGTCCCCATCCTCC+AGG 0.435952 2.2:-4668753 None:intergenic
TTCACTGGGGCGGTGTATGC+CGG 0.438322 2.2:-4667421 None:intergenic
AACTGGGCTTCCTTTGGTAT+CGG 0.452673 2.2:+4664377 MS.gene052060:CDS
CCAGCATATGCATACATTGA+AGG 0.454115 2.2:-4668855 None:intergenic
GGGGCGGTGTATGCCGGCAC+TGG 0.455472 2.2:-4667415 None:intergenic
ACCATAACCTTCTGGTTGAC+CGG 0.457610 2.2:-4664261 None:intergenic
AATCCTTATGCTGCTGCTGT+TGG 0.458426 2.2:+4664692 MS.gene052060:CDS
TCCGAATACTGGGAGGAGTA+AGG 0.459906 2.2:+4664535 MS.gene052060:CDS
CGGTGAACGCCGCCCTGATG+CGG 0.461004 2.2:+4664397 MS.gene052060:CDS
CTGCTGCAAGGATGAGGAAT+GGG 0.461294 2.2:-4669438 None:intergenic
TTATGCATATGGGGCTGCTC+AGG 0.463165 2.2:+4668830 MS.gene052060:CDS
AGGCATTTGAGTGCCGTTGT+AGG 0.465540 2.2:-4664330 None:intergenic
GGAAATTACTTATCAACATC+GGG 0.466329 2.2:-4669072 None:intergenic
GGTGAACGCCGCCCTGATGC+GGG 0.466689 2.2:+4664398 MS.gene052060:CDS
ATTATATAACTTACCTGTTG+CGG 0.469981 2.2:-4668900 None:intergenic
TACTTATGTTCGTAGGTTGA+AGG 0.474035 2.2:+4668976 MS.gene052060:intron
GGAAGAGTTGTATGATCCTC+TGG 0.477748 2.2:+4669044 MS.gene052060:CDS
GTAGCAGCACTAATCCTCAT+AGG 0.480555 2.2:-4664641 None:intergenic
CTGGTGGAACTGTATTCACT+GGG 0.480622 2.2:-4667435 None:intergenic
CTGGGAGGAGTAAGGGGTAT+GGG 0.481051 2.2:+4664543 MS.gene052060:CDS
CCTTCAATGTATGCATATGC+TGG 0.484513 2.2:+4668855 MS.gene052060:CDS
GTTATGAAGCTTATGCATAT+GGG 0.486863 2.2:+4668820 MS.gene052060:CDS
TTTGCAATGCAGATTTATGT+TGG 0.490899 2.2:+4667541 MS.gene052060:intron
GCTGCTGCTCCTGTTCCTAA+AGG 0.491900 2.2:+4664740 MS.gene052060:CDS
ACAAAACCACATGCTTTGCC+GGG 0.492254 2.2:-4667646 None:intergenic
CCCACAAATATCGAATGATC+TGG 0.492730 2.2:-4664422 None:intergenic
GTAGGTTTGAAGAACGCGTT+CGG 0.493065 2.2:-4664312 None:intergenic
TCTAGGACGTACCTGGAGGA+TGG 0.494871 2.2:+4668742 MS.gene052060:intron
TATGCATATGCTGGATATGC+TGG 0.494958 2.2:+4668864 MS.gene052060:CDS
AACGCGTTCGGCGGCAGAGT+GGG 0.495405 2.2:-4664300 None:intergenic
TCGAAGAAGTTCGAACCCTA+TGG 0.495608 2.2:+4664138 MS.gene052060:CDS
CTATGCACAATACCCGCAAC+AGG 0.497442 2.2:+4668887 MS.gene052060:CDS
CTAGGACGTACCTGGAGGAT+GGG 0.497812 2.2:+4668743 MS.gene052060:intron
GTTTAAACGGAAGGTTTGTT+CGG 0.500336 2.2:-4664357 None:intergenic
ATCCTTGCAGCAGCAAGCTT+AGG 0.506123 2.2:+4669448 MS.gene052060:CDS
GCACCAACAGCAGCAGCATA+AGG 0.509999 2.2:-4664695 None:intergenic
CGATGAGAGTGAGAGGAATC+GGG 0.510836 2.2:+4664580 MS.gene052060:CDS
ATTGTAAATCGCCTATCCAT+AGG 0.510888 2.2:-4664154 None:intergenic
AGAAGCCATTCAGAAGATGC+AGG 0.511885 2.2:+4667931 MS.gene052060:CDS
CCGAATACTGGGAGGAGTAA+GGG 0.512021 2.2:+4664536 MS.gene052060:CDS
ATACTATGGGTATGGACAGC+CGG 0.512029 2.2:+4668797 MS.gene052060:CDS
TGGAGTGCATACTATGGGTA+TGG 0.512551 2.2:+4668789 MS.gene052060:CDS
CCAGATCATTCGATATTTGT+GGG 0.515485 2.2:+4664422 MS.gene052060:CDS
AAATGGTTCTAGGACGTACC+TGG 0.515634 2.2:+4668735 MS.gene052060:intron
AGCTTGCTGCTGCAAGGATG+AGG 0.516585 2.2:-4669444 None:intergenic
TGTGCCTACCTTGGAACAAA+GGG 0.518894 2.2:+4669023 MS.gene052060:CDS
AGTAAATAATCCGTAACATC+CGG 0.522797 2.2:-4664455 None:intergenic
CAACTCTTCCCTTTGTTCCA+AGG 0.526046 2.2:-4669031 None:intergenic
CGGGCCATGTCGGAGATGAA+TGG 0.528162 2.2:+4664599 MS.gene052060:CDS
TACTATGGGTATGGACAGCC+GGG 0.528661 2.2:+4668798 MS.gene052060:CDS
ACTCATTATGGGAGTGTTCG+TGG 0.529143 2.2:+4664494 MS.gene052060:CDS
TCTTCCCTTTGTTCCAAGGT+AGG 0.532246 2.2:-4669027 None:intergenic
TAGGCCCCAAACAGCTAGAC+AGG 0.532303 2.2:+4667994 MS.gene052060:CDS
CTTCTTCGAGGGATGCTGGT+TGG 0.533486 2.2:-4664124 None:intergenic
AGCTATGTCTGTGCCTACCT+TGG 0.534806 2.2:+4669014 MS.gene052060:CDS
ACAAACCTTCCGTTTAAACT+GGG 0.535255 2.2:+4664361 MS.gene052060:CDS
AACAGGTGGATCAAAGTCAA+TGG 0.535631 2.2:+4668769 MS.gene052060:CDS
GGAAGCCCAGTTTAAACGGA+AGG 0.536078 2.2:-4664366 None:intergenic
TACAACGGCACTCAAATGCC+TGG 0.539720 2.2:+4664332 MS.gene052060:CDS
GTCAATGGAGTGCATACTAT+GGG 0.545165 2.2:+4668784 MS.gene052060:CDS
TTGTGACTGATCCGAATACT+GGG 0.547682 2.2:+4664525 MS.gene052060:CDS
ATAGGGTTCGAACTTCTTCG+AGG 0.549325 2.2:-4664136 None:intergenic
CTGTGCCTACCTTGGAACAA+AGG 0.550340 2.2:+4669022 MS.gene052060:CDS
ATTTGTGGGTGATTTGGCTC+CGG 0.555387 2.2:+4664436 MS.gene052060:CDS
ATCCTAAGCTTGCTGCTGCA+AGG 0.556106 2.2:-4669450 None:intergenic
ACTGGGAGGAGTAAGGGGTA+TGG 0.556936 2.2:+4664542 MS.gene052060:CDS
GGCAGCAATATATCCAGTGC+CGG 0.557073 2.2:+4667402 MS.gene052060:intron
TTGTTTACATCGTATTCTGG+TGG 0.561644 2.2:-4667451 None:intergenic
ATCATCCGCAACAAAATCAC+CGG 0.568521 2.2:+4664242 MS.gene052060:CDS
GAAGTTCGAACCCTATGGAT+AGG 0.569963 2.2:+4664143 MS.gene052060:CDS
TGGAGGATGGGGACAACAGG+TGG 0.570788 2.2:+4668755 MS.gene052060:CDS
GCTGCTGCAAGGATGAGGAA+TGG 0.571044 2.2:-4669439 None:intergenic
GGGAAATTACTTATCAACAT+CGG 0.572190 2.2:-4669073 None:intergenic
GGAGATGACTTCGCCGGTGT+GGG 0.574880 2.2:-4664213 None:intergenic
TTGTAAATCGCCTATCCATA+GGG 0.576708 2.2:-4664153 None:intergenic
AATTTAGCGATGAGAGTGAG+AGG 0.585717 2.2:+4664573 MS.gene052060:CDS
GTTTCTGTCAAAGTTCATCC+CGG 0.588194 2.2:+4667628 MS.gene052060:CDS
CGAATACTGGGAGGAGTAAG+GGG 0.590206 2.2:+4664537 MS.gene052060:CDS
TGAGAGGAATCGGGCCATGT+CGG 0.591959 2.2:+4664589 MS.gene052060:CDS
GGGGCCTACCCCAAGAAACT+CGG 0.596781 2.2:-4667979 None:intergenic
TAGGACGTACCTGGAGGATG+GGG 0.597591 2.2:+4668744 MS.gene052060:intron
GAACGCGTTCGGCGGCAGAG+TGG 0.602194 2.2:-4664301 None:intergenic
TAGGGTTCGAACTTCTTCGA+GGG 0.602408 2.2:-4664135 None:intergenic
TGGAGATGACTTCGCCGGTG+TGG 0.604188 2.2:-4664214 None:intergenic
TGGGAGTGTTCGTGGTGCGA+AGG 0.608528 2.2:+4664502 MS.gene052060:CDS
CAAATGATCCGAGTTTCTTG+GGG 0.616070 2.2:+4667971 MS.gene052060:CDS
GGATCTTAATGTCTCAGAGG+AGG 0.616641 2.2:+4667570 MS.gene052060:CDS
GTTCATCCCGGCAAAGCATG+TGG 0.617595 2.2:+4667640 MS.gene052060:CDS
GATAGGCGATTTACAATACT+GGG 0.619711 2.2:+4664160 MS.gene052060:CDS
AATGATCTGGACCCGCATCA+GGG 0.620505 2.2:-4664409 None:intergenic
ATTGTTCTACTAGACCTATG+AGG 0.628022 2.2:+4664627 MS.gene052060:CDS
TGATCCGAGTTTCTTGGGGT+AGG 0.628330 2.2:+4667975 MS.gene052060:CDS
GCCCTAAAATGGCATTTCCG+TGG 0.628522 2.2:-4669397 None:intergenic
GCTGCATATCTCTCAGTCCA+CGG 0.628742 2.2:+4669380 MS.gene052060:CDS
GAAGCCATTCAGAAGATGCA+GGG 0.631248 2.2:+4667932 MS.gene052060:CDS
TTATGAAGCTTATGCATATG+GGG 0.631339 2.2:+4668821 MS.gene052060:CDS
AAAATCACCGGTCAACCAGA+AGG 0.635000 2.2:+4664254 MS.gene052060:CDS
GCGGCGTTCACCGATACCAA+AGG 0.642957 2.2:-4664387 None:intergenic
TATGCATAAGCTTCATAACC+CGG 0.644180 2.2:-4668816 None:intergenic
TTTGATGGAGATGACTTCGC+CGG 0.645530 2.2:-4664219 None:intergenic
CGCGTTCTTCAAACCTACAA+CGG 0.646772 2.2:+4664317 MS.gene052060:CDS
AATACCTGTCTAGCTGTTTG+GGG 0.652016 2.2:-4667998 None:intergenic
TCAACATCGGGCATTGCCAG+AGG 0.653213 2.2:-4669060 None:intergenic
AACACCATTCATCTCCGACA+TGG 0.657909 2.2:-4664603 None:intergenic
ACACACTGCTTCTCCCACAC+CGG 0.659459 2.2:+4664200 MS.gene052060:CDS
TTTGGATCTTAATGTCTCAG+AGG 0.664207 2.2:+4667567 MS.gene052060:CDS
GGTTTGAAGAACGCGTTCGG+CGG 0.681527 2.2:-4664309 None:intergenic
TGGAACTGTATTCACTGGGG+CGG 0.702417 2.2:-4667431 None:intergenic
TGGTTCTAGGACGTACCTGG+AGG 0.726254 2.2:+4668738 MS.gene052060:intron
GATCTGGACCCGCATCAGGG+CGG 0.744581 2.2:-4664406 None:intergenic
TGACTGATCCGAATACTGGG+AGG 0.766798 2.2:+4664528 MS.gene052060:CDS
TGGTGGAACTGTATTCACTG+GGG 0.772508 2.2:-4667434 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTATATTATTAATTA+AGG - chr2.2:4665928-4665947 None:intergenic 0.0%
!! GTGTTTATTTATAAATTATT+GGG + chr2.2:4664856-4664875 MS.gene052060:intron 10.0%
!!! TAACAATATTTGAAATTTAA+AGG - chr2.2:4667239-4667258 None:intergenic 10.0%
!! CTTATATATAAGCTTAATAT+AGG - chr2.2:4666211-4666230 None:intergenic 15.0%
!! CTTATATGAAAACAATTTAT+AGG - chr2.2:4665187-4665206 None:intergenic 15.0%
!! GGTGTTTATTTATAAATTAT+TGG + chr2.2:4664855-4664874 MS.gene052060:intron 15.0%
!! TAAATATGAGATTTAAATCT+GGG - chr2.2:4669203-4669222 None:intergenic 15.0%
!! TATATTTGCACTAATAAATT+TGG + chr2.2:4668708-4668727 MS.gene052060:intron 15.0%
!! TGAAAATTTCAAAAATGTTA+CGG - chr2.2:4667497-4667516 None:intergenic 15.0%
!! TGAAATAAGAAAAAATAGAA+TGG - chr2.2:4667143-4667162 None:intergenic 15.0%
!! TTTAAATTTACATATTGCAT+TGG + chr2.2:4668923-4668942 MS.gene052060:intron 15.0%
!!! AAATCTTATCATTACTTTTT+AGG - chr2.2:4667756-4667775 None:intergenic 15.0%
!!! GTCATTTTTATAAGTAATTT+TGG + chr2.2:4664977-4664996 MS.gene052060:intron 15.0%
!!! TCTTTTTCGTTATTAATTTT+GGG - chr2.2:4665062-4665081 None:intergenic 15.0%
!!! TTTATTGATAATTCGAATTT+AGG + chr2.2:4668507-4668526 MS.gene052060:intron 15.0%
!!! TTTTATAATTAGGATATGTT+TGG + chr2.2:4664783-4664802 MS.gene052060:intron 15.0%
!! AAAATATGATAGAATCAGAA+TGG + chr2.2:4666922-4666941 MS.gene052060:intron 20.0%
!! AAGCATAACAATACATAAAA+AGG - chr2.2:4668214-4668233 None:intergenic 20.0%
!! ACATTCACATAATAGAATTA+AGG - chr2.2:4667866-4667885 None:intergenic 20.0%
!! AGCATAACAATACATAAAAA+GGG - chr2.2:4668213-4668232 None:intergenic 20.0%
!! CTAAATATGAGATTTAAATC+TGG - chr2.2:4669204-4669223 None:intergenic 20.0%
!! GTTAAAAACCTAAACAAATA+TGG - chr2.2:4668146-4668165 None:intergenic 20.0%
!! TTATGGAAATAAAATGAAAG+TGG + chr2.2:4666524-4666543 MS.gene052060:intron 20.0%
!! TTTACTTTATACTAGTAGAT+AGG + chr2.2:4666603-4666622 MS.gene052060:intron 20.0%
!!! ACAATAGATATGTATTGATA+TGG + chr2.2:4668468-4668487 MS.gene052060:intron 20.0%
!!! AGGTATTTTTTCTTTAGAAA+TGG + chr2.2:4668014-4668033 MS.gene052060:intron 20.0%
!!! ATTTTGATTTAGTACAACTT+AGG + chr2.2:4667354-4667373 MS.gene052060:intron 20.0%
!!! CCTAATTATAAAAAAGTGTA+GGG - chr2.2:4664776-4664795 None:intergenic 20.0%
!!! CTAATAAATTTGGTTCTAAA+TGG + chr2.2:4668718-4668737 MS.gene052060:intron 20.0%
!!! CTTTTTCGTTATTAATTTTG+GGG - chr2.2:4665061-4665080 None:intergenic 20.0%
!!! GTCTTTTTCGTTATTAATTT+TGG - chr2.2:4665063-4665082 None:intergenic 20.0%
!!! GTTATTTTTATATGCTATCT+TGG + chr2.2:4666496-4666515 MS.gene052060:intron 20.0%
!!! TATTTTTCTTGTACCTATAT+GGG + chr2.2:4666989-4667008 MS.gene052060:intron 20.0%
!!! TCCTAATTATAAAAAAGTGT+AGG - chr2.2:4664777-4664796 None:intergenic 20.0%
!!! TTAGATAAAGTTTGTTATGA+TGG - chr2.2:4668604-4668623 None:intergenic 20.0%
!!! TTCATTTTGACTGTAAAAAA+AGG - chr2.2:4665761-4665780 None:intergenic 20.0%
!!! TTTGAAATTTTCATTTCCTA+TGG + chr2.2:4667504-4667523 MS.gene052060:intron 20.0%
!!! TTTGTTTAGGTTTTTAACAT+AGG + chr2.2:4668148-4668167 MS.gene052060:intron 20.0%
! AACACATTGCATTGAAAATT+AGG - chr2.2:4666653-4666672 None:intergenic 25.0%
! AATAAAATGAAAGTGGCTTA+TGG + chr2.2:4666531-4666550 MS.gene052060:intron 25.0%
! ACACATTGCATTGAAAATTA+GGG - chr2.2:4666652-4666671 None:intergenic 25.0%
! AGTGCTTATGTATAAGTTAT+TGG + chr2.2:4665418-4665437 MS.gene052060:intron 25.0%
! ATACTTATCTATGATTTCCT+TGG + chr2.2:4667381-4667400 MS.gene052060:intron 25.0%
! ATTATATAACTTACCTGTTG+CGG - chr2.2:4668903-4668922 None:intergenic 25.0%
! CATGTTATAAAAAGAAAGGA+GGG - chr2.2:4669096-4669115 None:intergenic 25.0%
! GTACAAGAAAAATAGAGAAA+CGG - chr2.2:4666983-4667002 None:intergenic 25.0%
! GTGCTTATGTATAAGTTATT+GGG + chr2.2:4665419-4665438 MS.gene052060:intron 25.0%
! TAATGGTTAAAGACTAAAAC+AGG + chr2.2:4668377-4668396 MS.gene052060:intron 25.0%
! TACAAGAAAAATAGAGAAAC+GGG - chr2.2:4666982-4667001 None:intergenic 25.0%
! TTTATTTCCAGAAGTTATCT+AGG - chr2.2:4665232-4665251 None:intergenic 25.0%
!! AAGCAAAACTTTTTGCAATT+TGG + chr2.2:4667598-4667617 MS.gene052060:CDS 25.0%
!! AGTTGAAACTTTGATCTTTT+TGG + chr2.2:4667322-4667341 MS.gene052060:intron 25.0%
!! ATAGATATGTATTGATATGG+AGG + chr2.2:4668471-4668490 MS.gene052060:intron 25.0%
!! ATATAGTTTGTACTTGTGAA+TGG + chr2.2:4666793-4666812 MS.gene052060:intron 25.0%
!! ATTTACTACAAGAGACTTTT+AGG + chr2.2:4664471-4664490 MS.gene052060:CDS 25.0%
!! CTCCTTTCTTTTTATAACAT+GGG + chr2.2:4669095-4669114 MS.gene052060:intron 25.0%
!! CTCTTCTGTTAGTAATTTTA+TGG - chr2.2:4666331-4666350 None:intergenic 25.0%
!! GTCTCTTTTATAAGTCATTT+TGG + chr2.2:4664964-4664983 MS.gene052060:intron 25.0%
!! TATAGTTTGTACTTGTGAAT+GGG + chr2.2:4666794-4666813 MS.gene052060:intron 25.0%
!! TATGTAGAAGTTTGTTTGTT+AGG + chr2.2:4668235-4668254 MS.gene052060:intron 25.0%
!! TTCTGGAAATAAAGTGAAAT+TGG + chr2.2:4665239-4665258 MS.gene052060:intron 25.0%
!! TTTCAACTTTTCCTTTGTAT+AGG + chr2.2:4667085-4667104 MS.gene052060:intron 25.0%
!!! ATACAAATTTTAGAACCTCA+AGG - chr2.2:4667184-4667203 None:intergenic 25.0%
!!! CAATTCAAACAACCTTTTTT+GGG + chr2.2:4665347-4665366 MS.gene052060:intron 25.0%
!!! CCCTACACTTTTTTATAATT+AGG + chr2.2:4664773-4664792 MS.gene052060:intron 25.0%
!!! CTATTTTTCTTGTACCTATA+TGG + chr2.2:4666988-4667007 MS.gene052060:intron 25.0%
!!! TCAATTCAAACAACCTTTTT+TGG + chr2.2:4665346-4665365 MS.gene052060:intron 25.0%
!!! TTTTTCAAACAAACTCACAA+GGG + chr2.2:4666580-4666599 MS.gene052060:intron 25.0%
AAATGCACATGAAGTCAATA+TGG - chr2.2:4669326-4669345 None:intergenic 30.0%
AACTTATCCTAGATAACTTC+TGG + chr2.2:4665222-4665241 MS.gene052060:intron 30.0%
AAGTTTGTAGTTATCACAAG+GGG - chr2.2:4668581-4668600 None:intergenic 30.0%
AATGCACATGAAGTCAATAT+GGG - chr2.2:4669325-4669344 None:intergenic 30.0%
ACAGTCAAAATGAAGAAGAA+AGG + chr2.2:4665767-4665786 MS.gene052060:intron 30.0%
ACTTCCACAAAACTAAATAG+TGG - chr2.2:4665449-4665468 None:intergenic 30.0%
AGAATCAGAATGGTATGTAA+AGG + chr2.2:4666932-4666951 MS.gene052060:intron 30.0%
AGGAGTCATATGTATAGATA+TGG + chr2.2:4668412-4668431 MS.gene052060:intron 30.0%
AGTAAATAATCCGTAACATC+CGG - chr2.2:4664458-4664477 None:intergenic 30.0%
AGTGTAATTCATTGTCACAT+TGG + chr2.2:4665466-4665485 MS.gene052060:intron 30.0%
ATATCTATACATATGACTCC+TGG - chr2.2:4668413-4668432 None:intergenic 30.0%
ATCTTGAAATTGTGAAGGTT+TGG + chr2.2:4668299-4668318 MS.gene052060:intron 30.0%
ATGCTATCTTGGATAACTTA+TGG + chr2.2:4666507-4666526 MS.gene052060:intron 30.0%
ATTACTAACAGAAGAGACAA+TGG + chr2.2:4666335-4666354 MS.gene052060:intron 30.0%
CAAATCGTCCATATTTGTTT+AGG + chr2.2:4668135-4668154 MS.gene052060:intron 30.0%
CAGTCAAAATGAAGAAGAAA+GGG + chr2.2:4665768-4665787 MS.gene052060:intron 30.0%
CATTGAAAATTAGGGCTATT+TGG - chr2.2:4666644-4666663 None:intergenic 30.0%
CCATGTTATAAAAAGAAAGG+AGG - chr2.2:4669097-4669116 None:intergenic 30.0%
CTCCCATGTTATAAAAAGAA+AGG - chr2.2:4669100-4669119 None:intergenic 30.0%
GAAGTTTGTAGTTATCACAA+GGG - chr2.2:4668582-4668601 None:intergenic 30.0%
GAGAAGTGAATGTAATTGTA+AGG - chr2.2:4667046-4667065 None:intergenic 30.0%
GGAAATTACTTATCAACATC+GGG - chr2.2:4669075-4669094 None:intergenic 30.0%
GGGAAATTACTTATCAACAT+CGG - chr2.2:4669076-4669095 None:intergenic 30.0%
GTAAAAATACTCAAGATGCA+TGG - chr2.2:4667827-4667846 None:intergenic 30.0%
GTAAGAAAATTGTACATGAC+CGG + chr2.2:4666763-4666782 MS.gene052060:intron 30.0%
GTATTGTTTACATCGTATTC+TGG - chr2.2:4667457-4667476 None:intergenic 30.0%
GTTATGAAGCTTATGCATAT+GGG + chr2.2:4668820-4668839 MS.gene052060:CDS 30.0%
TAGAGAGTTGTTGAATGTTA+TGG - chr2.2:4666702-4666721 None:intergenic 30.0%
TATCTATACATATGACTCCT+GGG - chr2.2:4668412-4668431 None:intergenic 30.0%
TCAAGATGCATGGTAAATTA+GGG - chr2.2:4667817-4667836 None:intergenic 30.0%
TGAAACTTATTTCCTTTGAG+AGG - chr2.2:4667789-4667808 None:intergenic 30.0%
TGACAAACGAAAAACGTAAT+TGG - chr2.2:4666301-4666320 None:intergenic 30.0%
TGATAATTCGAATTTAGGCT+TGG + chr2.2:4668512-4668531 MS.gene052060:intron 30.0%
TGCTTAAAAAGAGATTAGAG+AGG - chr2.2:4667697-4667716 None:intergenic 30.0%
TGTATAGATATGGTTGTTGA+AGG + chr2.2:4668422-4668441 MS.gene052060:intron 30.0%
TTAAACTTACTGCCCAAAAA+AGG - chr2.2:4665362-4665381 None:intergenic 30.0%
TTACATGGGTCAATACTTAA+TGG + chr2.2:4668360-4668379 MS.gene052060:intron 30.0%
TTACTAACAGAAGAGACAAT+GGG + chr2.2:4666336-4666355 MS.gene052060:intron 30.0%
TTATATAACTTACCTGTTGC+GGG - chr2.2:4668902-4668921 None:intergenic 30.0%
TTATGAAGCTTATGCATATG+GGG + chr2.2:4668821-4668840 MS.gene052060:CDS 30.0%
TTGATATACACAAATGCACA+AGG - chr2.2:4668071-4668090 None:intergenic 30.0%
TTGCAATTTCGATACATTCA+GGG - chr2.2:4664930-4664949 None:intergenic 30.0%
TTGCGATTTCGATACATTTA+GGG + chr2.2:4666366-4666385 MS.gene052060:intron 30.0%
TTTAAAGGATTGCATAACCT+TGG - chr2.2:4667224-4667243 None:intergenic 30.0%
TTTGCAATGCAGATTTATGT+TGG + chr2.2:4667541-4667560 MS.gene052060:intron 30.0%
TTTGCAATTCGATGCATTTA+GGG + chr2.2:4665092-4665111 MS.gene052060:intron 30.0%
TTTGCAATTTCGATACATTC+AGG - chr2.2:4664931-4664950 None:intergenic 30.0%
TTTGCGATTTCGATACATTT+AGG + chr2.2:4666365-4666384 MS.gene052060:intron 30.0%
! AATAAAGTGAAATTGGCTCA+TGG + chr2.2:4665246-4665265 MS.gene052060:intron 30.0%
! CCTCCTTTCTTTTTATAACA+TGG + chr2.2:4669094-4669113 MS.gene052060:intron 30.0%
! TTACAGCAAAACAACCATTT+TGG - chr2.2:4666422-4666441 None:intergenic 30.0%
! TTTGTTATACCTTTAGGAAC+AGG - chr2.2:4664752-4664771 None:intergenic 30.0%
!! ATTAAGTATTGACCCATGTA+AGG - chr2.2:4668361-4668380 None:intergenic 30.0%
!! ATTGCATTGGTTCATATTGA+AGG + chr2.2:4668936-4668955 MS.gene052060:intron 30.0%
!! ATTTGGTTCTAAATGGTTCT+AGG + chr2.2:4668725-4668744 MS.gene052060:intron 30.0%
!! GCAGATTTATGTTGGTAATT+TGG + chr2.2:4667549-4667568 MS.gene052060:intron 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG - chr2.2:4666145-4666164 None:intergenic 30.0%
!! TTAAGTATTGACCCATGTAA+GGG - chr2.2:4668360-4668379 None:intergenic 30.0%
!! TTGCATTGGTTCATATTGAA+GGG + chr2.2:4668937-4668956 MS.gene052060:intron 30.0%
!!! AGACTTTTAGGACTCATTAT+GGG + chr2.2:4664483-4664502 MS.gene052060:CDS 30.0%
!!! ATGTGGTTTTGTTCAATTTG+GGG + chr2.2:4667657-4667676 MS.gene052060:CDS 30.0%
!!! CAAACCACTATTTAGTTTTG+TGG + chr2.2:4665442-4665461 MS.gene052060:intron 30.0%
!!! CATGTGGTTTTGTTCAATTT+GGG + chr2.2:4667656-4667675 MS.gene052060:CDS 30.0%
!!! CTTTTTCAAACAAACTCACA+AGG + chr2.2:4666579-4666598 MS.gene052060:intron 30.0%
AAAACAGGAAATGATATCCC+AGG + chr2.2:4668392-4668411 MS.gene052060:intron 35.0%
AAAATACCTGTCTAGCTGTT+TGG - chr2.2:4668003-4668022 None:intergenic 35.0%
AAATACCTGTCTAGCTGTTT+GGG - chr2.2:4668002-4668021 None:intergenic 35.0%
AACAAACCTTCCGTTTAAAC+TGG + chr2.2:4664360-4664379 MS.gene052060:CDS 35.0%
AACAAATGATCCGAGTTTCT+TGG + chr2.2:4667969-4667988 MS.gene052060:CDS 35.0%
AACAAGCTGCTTATCCAAAT+AGG + chr2.2:4666267-4666286 MS.gene052060:intron 35.0%
AACATACCATGCCTATACAA+AGG - chr2.2:4667099-4667118 None:intergenic 35.0%
AACTGAACACGAGATATTGA+CGG + chr2.2:4669126-4669145 MS.gene052060:intron 35.0%
AAGATGCAGGGAAAGATATT+AGG + chr2.2:4667944-4667963 MS.gene052060:CDS 35.0%
ACAAACCTTCCGTTTAAACT+GGG + chr2.2:4664361-4664380 MS.gene052060:CDS 35.0%
ACAAATGATCCGAGTTTCTT+GGG + chr2.2:4667970-4667989 MS.gene052060:CDS 35.0%
ACAAGCTGCTTATCCAAATA+GGG + chr2.2:4666268-4666287 MS.gene052060:intron 35.0%
AGAAAAATAGAGAAACGGGA+CGG - chr2.2:4666978-4666997 None:intergenic 35.0%
AGCATAAGTGTTTACACTGT+TGG + chr2.2:4664834-4664853 MS.gene052060:intron 35.0%
AGGTTATCTAGATTACCTTG+TGG - chr2.2:4665167-4665186 None:intergenic 35.0%
AGTCAACAGAATCTGTTCTT+AGG + chr2.2:4665022-4665041 MS.gene052060:intron 35.0%
ATAGACCATCCGATCTAAAT+CGG + chr2.2:4669256-4669275 MS.gene052060:intron 35.0%
ATCTGACTACTTATGTTCGT+AGG + chr2.2:4668969-4668988 MS.gene052060:intron 35.0%
ATTACATGCAATCATGCAGT+CGG - chr2.2:4669296-4669315 None:intergenic 35.0%
ATTGTAAATCGCCTATCCAT+AGG - chr2.2:4664157-4664176 None:intergenic 35.0%
ATTGTTCTACTAGACCTATG+AGG + chr2.2:4664627-4664646 MS.gene052060:CDS 35.0%
CAAAGGAAATAAGTTTCACG+TGG + chr2.2:4667791-4667810 MS.gene052060:intron 35.0%
CATTCCATCAATCATCAACA+CGG - chr2.2:4666874-4666893 None:intergenic 35.0%
CCAGATCATTCGATATTTGT+GGG + chr2.2:4664422-4664441 MS.gene052060:CDS 35.0%
CTCAAGATGCATGGTAAATT+AGG - chr2.2:4667818-4667837 None:intergenic 35.0%
GAGCAATCTTGAAATTGTGA+AGG + chr2.2:4668294-4668313 MS.gene052060:intron 35.0%
GATAGGCGATTTACAATACT+GGG + chr2.2:4664160-4664179 MS.gene052060:CDS 35.0%
GATTAGAGATCTAGAGATCT+AGG + chr2.2:4665806-4665825 MS.gene052060:intron 35.0%
GGAAGTTTGTAGTTATCACA+AGG - chr2.2:4668583-4668602 None:intergenic 35.0%
GGTTATGAAGCTTATGCATA+TGG + chr2.2:4668819-4668838 MS.gene052060:CDS 35.0%
GGTTCTCAGAATATGTTGTT+AGG + chr2.2:4664998-4665017 MS.gene052060:intron 35.0%
GTACCTATATGGGTTTAAGA+TGG + chr2.2:4666999-4667018 MS.gene052060:intron 35.0%
GTTCCATCTTAAACCCATAT+AGG - chr2.2:4667005-4667024 None:intergenic 35.0%
GTTTGCAATTCGATGCATTT+AGG + chr2.2:4665091-4665110 MS.gene052060:intron 35.0%
TACAAACTATATAGTGACGC+CGG - chr2.2:4666785-4666804 None:intergenic 35.0%
TACATTCACTTCTCGAACTT+TGG + chr2.2:4667052-4667071 MS.gene052060:intron 35.0%
TACTAACAGAAGAGACAATG+GGG + chr2.2:4666337-4666356 MS.gene052060:intron 35.0%
TAGAATAGAACCCCATGTAT+GGG - chr2.2:4668175-4668194 None:intergenic 35.0%
TATGCATAAGCTTCATAACC+CGG - chr2.2:4668819-4668838 None:intergenic 35.0%
TCCAGATCATTCGATATTTG+TGG + chr2.2:4664421-4664440 MS.gene052060:CDS 35.0%
TGTTATGGTCATAACTCACA+AGG - chr2.2:4666687-4666706 None:intergenic 35.0%
TTAACATAGGACCCATACAT+GGG + chr2.2:4668161-4668180 MS.gene052060:intron 35.0%
TTCAAAAATGTTACGGCTAC+AGG - chr2.2:4667490-4667509 None:intergenic 35.0%
TTCGATATTTGTGGGTGATT+TGG + chr2.2:4664430-4664449 MS.gene052060:CDS 35.0%
TTGCAATTCGATGCATTTAG+GGG + chr2.2:4665093-4665112 MS.gene052060:intron 35.0%
TTGGAAGGGTTTATGTTCTT+AGG + chr2.2:4665309-4665328 MS.gene052060:intron 35.0%
TTGTAAATCGCCTATCCATA+GGG - chr2.2:4664156-4664175 None:intergenic 35.0%
TTGTTTACATCGTATTCTGG+TGG - chr2.2:4667454-4667473 None:intergenic 35.0%
TTTAACATAGGACCCATACA+TGG + chr2.2:4668160-4668179 MS.gene052060:intron 35.0%
TTTGATATGTTGCCTCTCAA+AGG + chr2.2:4667774-4667793 MS.gene052060:intron 35.0%
TTTGGATCTTAATGTCTCAG+AGG + chr2.2:4667567-4667586 MS.gene052060:CDS 35.0%
! ACTTTTCCTTTGTATAGGCA+TGG + chr2.2:4667090-4667109 MS.gene052060:intron 35.0%
! AGAACAGAGATGAGATTTTG+TGG - chr2.2:4665727-4665746 None:intergenic 35.0%
! ATAAGGATTTTGCTGATACC+CGG - chr2.2:4664681-4664700 None:intergenic 35.0%
! CGGCAAATTTTCAATCAAAC+AGG - chr2.2:4666854-4666873 None:intergenic 35.0%
! GTTTAAACGGAAGGTTTGTT+CGG - chr2.2:4664360-4664379 None:intergenic 35.0%
! TACTTATGTTCGTAGGTTGA+AGG + chr2.2:4668976-4668995 MS.gene052060:intron 35.0%
! TTGTGGCAAATCAACCATTT+TGG - chr2.2:4665150-4665169 None:intergenic 35.0%
! TTTGTTGCGGATGATTTTGA+TGG - chr2.2:4664237-4664256 None:intergenic 35.0%
! TTTGTTTGTTAGGACATGTG+TGG + chr2.2:4668245-4668264 MS.gene052060:intron 35.0%
!! AAAATGGTTGATTTGCCACA+AGG + chr2.2:4665149-4665168 MS.gene052060:intron 35.0%
!! AAAGTATGTAAGAGCACCAT+AGG - chr2.2:4667523-4667542 None:intergenic 35.0%
!! AGTGTAACTTGCTGTAACAT+TGG + chr2.2:4664903-4664922 MS.gene052060:intron 35.0%
!! TAGGGCTTTGTTATACCTTT+AGG - chr2.2:4664758-4664777 None:intergenic 35.0%
!!! GAGACTTTTAGGACTCATTA+TGG + chr2.2:4664482-4664501 MS.gene052060:CDS 35.0%
!!! GCATGTGGTTTTGTTCAATT+TGG + chr2.2:4667655-4667674 MS.gene052060:CDS 35.0%
AACAAAACCACATGCTTTGC+CGG - chr2.2:4667650-4667669 None:intergenic 40.0%
AACAGGTGGATCAAAGTCAA+TGG + chr2.2:4668769-4668788 MS.gene052060:CDS 40.0%
AACTTGTGAATGGCCAATGT+GGG + chr2.2:4668323-4668342 MS.gene052060:intron 40.0%
AAGGATTGCATAACCTTGGT+AGG - chr2.2:4667220-4667239 None:intergenic 40.0%
AAGGTTTGGCAACTTGTGAA+TGG + chr2.2:4668313-4668332 MS.gene052060:intron 40.0%
AATACCTGTCTAGCTGTTTG+GGG - chr2.2:4668001-4668020 None:intergenic 40.0%
AATTGGCGACTATCCCTATT+TGG - chr2.2:4666284-4666303 None:intergenic 40.0%
AATTTAGCGATGAGAGTGAG+AGG + chr2.2:4664573-4664592 MS.gene052060:CDS 40.0%
ACATTGAGAGACCCTTACAT+GGG + chr2.2:4668346-4668365 MS.gene052060:intron 40.0%
ACCTTGGTAGGGTAAAAAGA+AGG - chr2.2:4667208-4667227 None:intergenic 40.0%
ACTTCCAGAAACCAAGATAG+CGG - chr2.2:4664886-4664905 None:intergenic 40.0%
AGGATTGCATAACCTTGGTA+GGG - chr2.2:4667219-4667238 None:intergenic 40.0%
AGTCAATGGAGTGCATACTA+TGG + chr2.2:4668783-4668802 MS.gene052060:CDS 40.0%
AGTCTGCTTGAAAGAGCTTA+CGG - chr2.2:4665290-4665309 None:intergenic 40.0%
ATCATCCGCAACAAAATCAC+CGG + chr2.2:4664242-4664261 MS.gene052060:CDS 40.0%
ATTGTATGCAGTCTTGCAGT+CGG + chr2.2:4669155-4669174 MS.gene052060:intron 40.0%
CAAAGGAAGCCCAGTTTAAA+CGG - chr2.2:4664373-4664392 None:intergenic 40.0%
CAAATGATCCGAGTTTCTTG+GGG + chr2.2:4667971-4667990 MS.gene052060:CDS 40.0%
CAAATGCAAGACTTTGTCCT+AGG - chr2.2:4667301-4667320 None:intergenic 40.0%
CACACATTCAAGGACCAAAA+TGG + chr2.2:4665133-4665152 MS.gene052060:intron 40.0%
CCAGCATATGCATACATTGA+AGG - chr2.2:4668858-4668877 None:intergenic 40.0%
CCCACAAATATCGAATGATC+TGG - chr2.2:4664425-4664444 None:intergenic 40.0%
CCTTCAATGTATGCATATGC+TGG + chr2.2:4668855-4668874 MS.gene052060:CDS 40.0%
CTAAATCGGACGGCAAAAAA+GGG + chr2.2:4669270-4669289 MS.gene052060:intron 40.0%
CTACCTCATAGTTGTCAAAG+CGG - chr2.2:4666043-4666062 None:intergenic 40.0%
CTAGAATAGAACCCCATGTA+TGG - chr2.2:4668176-4668195 None:intergenic 40.0%
CTGCATGATTGCATGTAATC+TGG + chr2.2:4669297-4669316 MS.gene052060:intron 40.0%
GAGATATGCAGCATTTAACC+TGG - chr2.2:4669372-4669391 None:intergenic 40.0%
GGATAGGCGATTTACAATAC+TGG + chr2.2:4664159-4664178 MS.gene052060:CDS 40.0%
GTCAATGGAGTGCATACTAT+GGG + chr2.2:4668784-4668803 MS.gene052060:CDS 40.0%
GTTTCTGTCAAAGTTCATCC+CGG + chr2.2:4667628-4667647 MS.gene052060:CDS 40.0%
TAACATAGGACCCATACATG+GGG + chr2.2:4668162-4668181 MS.gene052060:intron 40.0%
TAAGCTCTTTCAAGCAGACT+TGG + chr2.2:4665290-4665309 MS.gene052060:intron 40.0%
TAGAACCTCAAGGCTAAAGT+TGG - chr2.2:4667174-4667193 None:intergenic 40.0%
TAGTCCTCTGTTGTCAATAG+CGG + chr2.2:4665568-4665587 MS.gene052060:intron 40.0%
TATGCATATGCTGGATATGC+TGG + chr2.2:4668864-4668883 MS.gene052060:CDS 40.0%
TCGATGAAACCATAACCTTC+TGG - chr2.2:4664272-4664291 None:intergenic 40.0%
TCTAAATCGGACGGCAAAAA+AGG + chr2.2:4669269-4669288 MS.gene052060:intron 40.0%
TCTTTCAAGCAGACTTGGAA+GGG + chr2.2:4665295-4665314 MS.gene052060:intron 40.0%
TGGTTCTCGAATCTGTTCTT+AGG + chr2.2:4665545-4665564 MS.gene052060:intron 40.0%
TTAACCTGGCAAAGCAATCA+AGG - chr2.2:4669358-4669377 None:intergenic 40.0%
TTGAAAGAGCTTACGGAATC+AGG - chr2.2:4665283-4665302 None:intergenic 40.0%
TTGTGACTGATCCGAATACT+GGG + chr2.2:4664525-4664544 MS.gene052060:CDS 40.0%
TTTCCGCTTTGACAACTATG+AGG + chr2.2:4666037-4666056 MS.gene052060:intron 40.0%
! TGATACCCGGTAGTTTTCTT+GGG - chr2.2:4664668-4664687 None:intergenic 40.0%
! TGTACTTGTGAATGGGTTTC+TGG + chr2.2:4666801-4666820 MS.gene052060:intron 40.0%
! TTTTGCCGTCCGATTTAGAT+CGG - chr2.2:4669268-4669287 None:intergenic 40.0%
! TTTTGGTCCTTGAATGTGTG+AGG - chr2.2:4665133-4665152 None:intergenic 40.0%
!! CGTGTTGATGATTGATGGAA+TGG + chr2.2:4666872-4666891 MS.gene052060:intron 40.0%
!! GATATCCAACTTTAGCCTTG+AGG + chr2.2:4667166-4667185 MS.gene052060:intron 40.0%
!! GTTTTGTTCAATTTGGGGCT+AGG + chr2.2:4667662-4667681 MS.gene052060:CDS 40.0%
!! TTTGCCGTGTTGATGATTGA+TGG + chr2.2:4666867-4666886 MS.gene052060:intron 40.0%
!!! TCCACGGAAATGCCATTTTA+GGG + chr2.2:4669396-4669415 MS.gene052060:CDS 40.0%
AAAATCACCGGTCAACCAGA+AGG + chr2.2:4664254-4664273 MS.gene052060:CDS 45.0%
AACACCATTCATCTCCGACA+TGG - chr2.2:4664606-4664625 None:intergenic 45.0%
AACTGGGCTTCCTTTGGTAT+CGG + chr2.2:4664377-4664396 MS.gene052060:CDS 45.0%
AATCCTTATGCTGCTGCTGT+TGG + chr2.2:4664692-4664711 MS.gene052060:CDS 45.0%
ACAAAACCACATGCTTTGCC+GGG - chr2.2:4667649-4667668 None:intergenic 45.0%
ACCATCCGATCTAAATCGGA+CGG + chr2.2:4669260-4669279 MS.gene052060:intron 45.0%
AGAAGCCATTCAGAAGATGC+AGG + chr2.2:4667931-4667950 MS.gene052060:CDS 45.0%
AGGCAAAAGCGGAACAAAAG+CGG + chr2.2:4665655-4665674 MS.gene052060:intron 45.0%
ATACTATGGGTATGGACAGC+CGG + chr2.2:4668797-4668816 MS.gene052060:CDS 45.0%
ATAGGGTTCGAACTTCTTCG+AGG - chr2.2:4664139-4664158 None:intergenic 45.0%
ATGTCCTTGATTGCTTTGCC+AGG + chr2.2:4669351-4669370 MS.gene052060:intron 45.0%
CAAACCGCTATCTTGGTTTC+TGG + chr2.2:4664879-4664898 MS.gene052060:intron 45.0%
CAACTCTTCCCTTTGTTCCA+AGG - chr2.2:4669034-4669053 None:intergenic 45.0%
CAACTTGTGAATGGCCAATG+TGG + chr2.2:4668322-4668341 MS.gene052060:intron 45.0%
CACTGGATATATTGCTGCCA+AGG - chr2.2:4667401-4667420 None:intergenic 45.0%
CGCGTTCTTCAAACCTACAA+CGG + chr2.2:4664317-4664336 MS.gene052060:CDS 45.0%
CGTTTAAACTGGGCTTCCTT+TGG + chr2.2:4664371-4664390 MS.gene052060:CDS 45.0%
CTCTTTCAAGCAGACTTGGA+AGG + chr2.2:4665294-4665313 MS.gene052060:intron 45.0%
CTGCAAGACTGCATACAATC+CGG - chr2.2:4669154-4669173 None:intergenic 45.0%
CTGGTGGAACTGTATTCACT+GGG - chr2.2:4667438-4667457 None:intergenic 45.0%
CTTTCCCTGCATCTTCTGAA+TGG - chr2.2:4667939-4667958 None:intergenic 45.0%
GAAGCCATTCAGAAGATGCA+GGG + chr2.2:4667932-4667951 MS.gene052060:CDS 45.0%
GAAGTTCGAACCCTATGGAT+AGG + chr2.2:4664143-4664162 MS.gene052060:CDS 45.0%
GACATTGAGAGACCCTTACA+TGG + chr2.2:4668345-4668364 MS.gene052060:intron 45.0%
GAGATTTAAATCTGGGCCGT+CGG - chr2.2:4669196-4669215 None:intergenic 45.0%
GATGTGACTAGAACCTTCCT+AGG + chr2.2:4667281-4667300 MS.gene052060:intron 45.0%
GGAAGAGTTGTATGATCCTC+TGG + chr2.2:4669044-4669063 MS.gene052060:CDS 45.0%
GGATCTTAATGTCTCAGAGG+AGG + chr2.2:4667570-4667589 MS.gene052060:CDS 45.0%
GTAGCAGCACTAATCCTCAT+AGG - chr2.2:4664644-4664663 None:intergenic 45.0%
GTAGGTTTGAAGAACGCGTT+CGG - chr2.2:4664315-4664334 None:intergenic 45.0%
GTTGTGACTGATCCGAATAC+TGG + chr2.2:4664524-4664543 MS.gene052060:CDS 45.0%
TAGACCGCTATTGACAACAG+AGG - chr2.2:4665575-4665594 None:intergenic 45.0%
TAGGGTTCGAACTTCTTCGA+GGG - chr2.2:4664138-4664157 None:intergenic 45.0%
TAGTTGTCAAAGCGGAAACG+CGG - chr2.2:4666035-4666054 None:intergenic 45.0%
TATTGGGCAAACCGCTATCT+TGG + chr2.2:4664872-4664891 MS.gene052060:intron 45.0%
TCGAAGAAGTTCGAACCCTA+TGG + chr2.2:4664138-4664157 MS.gene052060:CDS 45.0%
TCTGGTGGAACTGTATTCAC+TGG - chr2.2:4667439-4667458 None:intergenic 45.0%
TCTTCCCTTTGTTCCAAGGT+AGG - chr2.2:4669030-4669049 None:intergenic 45.0%
TGCAAGACTTTGTCCTAGGA+AGG - chr2.2:4667297-4667316 None:intergenic 45.0%
TGGAGTGCATACTATGGGTA+TGG + chr2.2:4668789-4668808 MS.gene052060:CDS 45.0%
TGGTGGAACTGTATTCACTG+GGG - chr2.2:4667437-4667456 None:intergenic 45.0%
TGTGCCTACCTTGGAACAAA+GGG + chr2.2:4669023-4669042 MS.gene052060:CDS 45.0%
TTCAGCACCTCACACATTCA+AGG + chr2.2:4665123-4665142 MS.gene052060:intron 45.0%
TTGTCAATAGCGGTCTAACG+CGG + chr2.2:4665578-4665597 MS.gene052060:intron 45.0%
TTTGATGGAGATGACTTCGC+CGG - chr2.2:4664222-4664241 None:intergenic 45.0%
! ACACGAGATATTGACGGATC+CGG + chr2.2:4669132-4669151 MS.gene052060:intron 45.0%
! ACCATAACCTTCTGGTTGAC+CGG - chr2.2:4664264-4664283 None:intergenic 45.0%
! ATACCCGGTAGTTTTCTTGG+GGG - chr2.2:4664666-4664685 None:intergenic 45.0%
! ATTTGTGGGTGATTTGGCTC+CGG + chr2.2:4664436-4664455 MS.gene052060:CDS 45.0%
! CTGATACCCGGTAGTTTTCT+TGG - chr2.2:4664669-4664688 None:intergenic 45.0%
! GATACCCGGTAGTTTTCTTG+GGG - chr2.2:4664667-4664686 None:intergenic 45.0%
! GCCTTCTTTTTACCCTACCA+AGG + chr2.2:4667204-4667223 MS.gene052060:intron 45.0%
! GTTGACCGGTGATTTTGTTG+CGG - chr2.2:4664250-4664269 None:intergenic 45.0%
! TGATTTGGCTCCGGATGTTA+CGG + chr2.2:4664445-4664464 MS.gene052060:CDS 45.0%
!! AAATGGTTCTAGGACGTACC+TGG + chr2.2:4668735-4668754 MS.gene052060:intron 45.0%
!! ACTCATTATGGGAGTGTTCG+TGG + chr2.2:4664494-4664513 MS.gene052060:CDS 45.0%
!!! ACGGAAATGCCATTTTAGGG+CGG + chr2.2:4669399-4669418 MS.gene052060:CDS 45.0%
!!! GTCCACGGAAATGCCATTTT+AGG + chr2.2:4669395-4669414 MS.gene052060:CDS 45.0%
AATGATCTGGACCCGCATCA+GGG - chr2.2:4664412-4664431 None:intergenic 50.0%
ACCGGTCAACCAGAAGGTTA+TGG + chr2.2:4664260-4664279 MS.gene052060:CDS 50.0%
AGCTATGTCTGTGCCTACCT+TGG + chr2.2:4669014-4669033 MS.gene052060:CDS 50.0%
CCCTTACTCCTCCCAGTATT+CGG - chr2.2:4664539-4664558 None:intergenic 50.0%
CCGAATACTGGGAGGAGTAA+GGG + chr2.2:4664536-4664555 MS.gene052060:CDS 50.0%
CGAATACTGGGAGGAGTAAG+GGG + chr2.2:4664537-4664556 MS.gene052060:CDS 50.0%
CGATGAGAGTGAGAGGAATC+GGG + chr2.2:4664580-4664599 MS.gene052060:CDS 50.0%
CTACCCCCAAGAAAACTACC+GGG + chr2.2:4664660-4664679 MS.gene052060:CDS 50.0%
CTATGCACAATACCCGCAAC+AGG + chr2.2:4668887-4668906 MS.gene052060:CDS 50.0%
CTGCTGCAAGGATGAGGAAT+GGG - chr2.2:4669441-4669460 None:intergenic 50.0%
CTGTGCCTACCTTGGAACAA+AGG + chr2.2:4669022-4669041 MS.gene052060:CDS 50.0%
GCCCTAAAATGGCATTTCCG+TGG - chr2.2:4669400-4669419 None:intergenic 50.0%
GCGATGAGAGTGAGAGGAAT+CGG + chr2.2:4664579-4664598 MS.gene052060:CDS 50.0%
GCTACCCCCAAGAAAACTAC+CGG + chr2.2:4664659-4664678 MS.gene052060:CDS 50.0%
GCTGCATATCTCTCAGTCCA+CGG + chr2.2:4669380-4669399 MS.gene052060:CDS 50.0%
GGAAGCCCAGTTTAAACGGA+AGG - chr2.2:4664369-4664388 None:intergenic 50.0%
GGCAAAAGCGGAACAAAAGC+GGG + chr2.2:4665656-4665675 MS.gene052060:intron 50.0%
GGCAGCAATATATCCAGTGC+CGG + chr2.2:4667402-4667421 MS.gene052060:intron 50.0%
GGTCTCTCAATGTCCCACAT+TGG - chr2.2:4668339-4668358 None:intergenic 50.0%
GTCCATTTCTGACCATCCGA+CGG + chr2.2:4669177-4669196 MS.gene052060:intron 50.0%
TACAACGGCACTCAAATGCC+TGG + chr2.2:4664332-4664351 MS.gene052060:CDS 50.0%
TACTATGGGTATGGACAGCC+GGG + chr2.2:4668798-4668817 MS.gene052060:CDS 50.0%
TCCGAATACTGGGAGGAGTA+AGG + chr2.2:4664535-4664554 MS.gene052060:CDS 50.0%
TGACTGATCCGAATACTGGG+AGG + chr2.2:4664528-4664547 MS.gene052060:CDS 50.0%
TGATCCGAGTTTCTTGGGGT+AGG + chr2.2:4667975-4667994 MS.gene052060:CDS 50.0%
TGGAACTGTATTCACTGGGG+CGG - chr2.2:4667434-4667453 None:intergenic 50.0%
TTATGCATATGGGGCTGCTC+AGG + chr2.2:4668830-4668849 MS.gene052060:CDS 50.0%
TTTAAATCTGGGCCGTCGGA+TGG - chr2.2:4669192-4669211 None:intergenic 50.0%
! AGGCATTTGAGTGCCGTTGT+AGG - chr2.2:4664333-4664352 None:intergenic 50.0%
!! AGGAATGGGTTTTGTGCCAG+AGG - chr2.2:4669427-4669446 None:intergenic 50.0%
!! GGAATGGGTTTTGTGCCAGA+GGG - chr2.2:4669426-4669445 None:intergenic 50.0%
ACACACTGCTTCTCCCACAC+CGG + chr2.2:4664200-4664219 MS.gene052060:CDS 55.0%
ACAGGAGCAGCAGCAACAAC+AGG - chr2.2:4664734-4664753 None:intergenic 55.0%
ACTGGGAGGAGTAAGGGGTA+TGG + chr2.2:4664542-4664561 MS.gene052060:CDS 55.0%
AGTCGCGCGTTAGGCAAAAG+CGG + chr2.2:4665644-4665663 MS.gene052060:intron 55.0%
CGAACTTCTTCGAGGGATGC+TGG - chr2.2:4664131-4664150 None:intergenic 55.0%
CTAGGACGTACCTGGAGGAT+GGG + chr2.2:4668743-4668762 MS.gene052060:intron 55.0%
CTTCTTCGAGGGATGCTGGT+TGG - chr2.2:4664127-4664146 None:intergenic 55.0%
GAACAAAAGCGGGTCAACGC+GGG + chr2.2:4665666-4665685 MS.gene052060:intron 55.0%
GAATGATCTGGACCCGCATC+AGG - chr2.2:4664413-4664432 None:intergenic 55.0%
GCACCAACAGCAGCAGCATA+AGG - chr2.2:4664698-4664717 None:intergenic 55.0%
GCCGTCCGATTTAGATCGGA+TGG - chr2.2:4669264-4669283 None:intergenic 55.0%
GCTGCTGCAAGGATGAGGAA+TGG - chr2.2:4669442-4669461 None:intergenic 55.0%
GCTGCTGCTCCTGTTCCTAA+AGG + chr2.2:4664740-4664759 MS.gene052060:CDS 55.0%
GGAACAAAAGCGGGTCAACG+CGG + chr2.2:4665665-4665684 MS.gene052060:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG - chr2.2:4666004-4666023 None:intergenic 55.0%
GGTTTGAAGAACGCGTTCGG+CGG - chr2.2:4664312-4664331 None:intergenic 55.0%
GTCAGCGCCTCACACATTCA+AGG + chr2.2:4666395-4666414 MS.gene052060:intron 55.0%
GTTCATCCCGGCAAAGCATG+TGG + chr2.2:4667640-4667659 MS.gene052060:CDS 55.0%
TAGGACGTACCTGGAGGATG+GGG + chr2.2:4668744-4668763 MS.gene052060:intron 55.0%
TAGGCCCCAAACAGCTAGAC+AGG + chr2.2:4667994-4668013 MS.gene052060:CDS 55.0%
TGAGAGGAATCGGGCCATGT+CGG + chr2.2:4664589-4664608 MS.gene052060:CDS 55.0%
! ACCGCGCCGCGTCAATTTTT+GGG + chr2.2:4665995-4666014 MS.gene052060:intron 55.0%
! CGGAAGGTTTGTTCGGTACC+AGG - chr2.2:4664353-4664372 None:intergenic 55.0%
! CTGGGAGGAGTAAGGGGTAT+GGG + chr2.2:4664543-4664562 MS.gene052060:CDS 55.0%
! CTTTTGCCTAACGCGCGACT+CGG - chr2.2:4665644-4665663 None:intergenic 55.0%
! TACCGCGCCGCGTCAATTTT+TGG + chr2.2:4665994-4666013 MS.gene052060:intron 55.0%
! TCAACATCGGGCATTGCCAG+AGG - chr2.2:4669063-4669082 None:intergenic 55.0%
! TCTAGGACGTACCTGGAGGA+TGG + chr2.2:4668742-4668761 MS.gene052060:intron 55.0%
!! AGCTTGCTGCTGCAAGGATG+AGG - chr2.2:4669447-4669466 None:intergenic 55.0%
!! TGGTTCTAGGACGTACCTGG+AGG + chr2.2:4668738-4668757 MS.gene052060:intron 55.0%
AATTGACGCGGCGCGGTAAG+CGG - chr2.2:4665992-4666011 None:intergenic 60.0%
ACCTGGAGGATGGGGACAAC+AGG + chr2.2:4668752-4668771 MS.gene052060:CDS 60.0%
ACCTGTTGTCCCCATCCTCC+AGG - chr2.2:4668756-4668775 None:intergenic 60.0%
CCAGAGGGACCGCCCTAAAA+TGG - chr2.2:4669411-4669430 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG - chr2.2:4665999-4666018 None:intergenic 60.0%
CGGGCCATGTCGGAGATGAA+TGG + chr2.2:4664599-4664618 MS.gene052060:CDS 60.0%
GCGGCGTTCACCGATACCAA+AGG - chr2.2:4664390-4664409 None:intergenic 60.0%
GGAGATGACTTCGCCGGTGT+GGG - chr2.2:4664216-4664235 None:intergenic 60.0%
GGCCGTCGGATGGTCAGAAA+TGG - chr2.2:4669182-4669201 None:intergenic 60.0%
GGGGCCTACCCCAAGAAACT+CGG - chr2.2:4667982-4668001 None:intergenic 60.0%
GGGTCAACGCGGGCAAAAAG+CGG + chr2.2:4665676-4665695 MS.gene052060:intron 60.0%
GGTCAACGCGGGCAAAAAGC+GGG + chr2.2:4665677-4665696 MS.gene052060:intron 60.0%
TGGAGATGACTTCGCCGGTG+TGG - chr2.2:4664217-4664236 None:intergenic 60.0%
TGGAGGATGGGGACAACAGG+TGG + chr2.2:4668755-4668774 MS.gene052060:CDS 60.0%
TTCACTGGGGCGGTGTATGC+CGG - chr2.2:4667424-4667443 None:intergenic 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG + chr2.2:4665996-4666015 MS.gene052060:intron 60.0%
! GCGGGCGCTTTTACATGACG+CGG - chr2.2:4665962-4665981 None:intergenic 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG + chr2.2:4665999-4666018 MS.gene052060:intron 60.0%
!! TGGGAGTGTTCGTGGTGCGA+AGG + chr2.2:4664502-4664521 MS.gene052060:CDS 60.0%
!!! CCATTTTAGGGCGGTCCCTC+TGG + chr2.2:4669408-4669427 MS.gene052060:CDS 60.0%
AACGCGTTCGGCGGCAGAGT+GGG - chr2.2:4664303-4664322 None:intergenic 65.0%
ATTGACGCGGCGCGGTAAGC+GGG - chr2.2:4665991-4666010 None:intergenic 65.0%
CGGTCGCGTTCTGACACGCT+AGG - chr2.2:4665624-4665643 None:intergenic 65.0%
CGGTCTAACGCGGAGCGATG+CGG + chr2.2:4665588-4665607 MS.gene052060:intron 65.0%
GATCTGGACCCGCATCAGGG+CGG - chr2.2:4664409-4664428 None:intergenic 65.0%
GTCAAAGCGGAAACGCGGCG+CGG - chr2.2:4666030-4666049 None:intergenic 65.0%
ACGCGACCGAGTCGCGCGTT+AGG + chr2.2:4665635-4665654 MS.gene052060:intron 70.0%
CGGTGAACGCCGCCCTGATG+CGG + chr2.2:4664397-4664416 MS.gene052060:CDS 70.0%
GAACGCGTTCGGCGGCAGAG+TGG - chr2.2:4664304-4664323 None:intergenic 70.0%
GGTGAACGCCGCCCTGATGC+GGG + chr2.2:4664398-4664417 MS.gene052060:CDS 70.0%
GGGGCGGTGTATGCCGGCAC+TGG - chr2.2:4667418-4667437 None:intergenic 75.0%
! AGCGGAAACGCGGCGCGGCG+CGG - chr2.2:4666025-4666044 None:intergenic 80.0%
! CGCGGTAAGCGGGCGCGACG+CGG - chr2.2:4665981-4666000 None:intergenic 80.0%
! GCGGTAAGCGGGCGCGACGC+GGG - chr2.2:4665980-4665999 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 4664107 4669469 4664107 ID=MS.gene052060
chr2.2 mRNA 4664107 4669469 4664107 ID=MS.gene052060.t1;Parent=MS.gene052060
chr2.2 exon 4664107 4664761 4664107 ID=MS.gene052060.t1.exon1;Parent=MS.gene052060.t1
chr2.2 CDS 4664107 4664761 4664107 ID=cds.MS.gene052060.t1;Parent=MS.gene052060.t1
chr2.2 exon 4667407 4667480 4667407 ID=MS.gene052060.t1.exon2;Parent=MS.gene052060.t1
chr2.2 CDS 4667407 4667480 4667407 ID=cds.MS.gene052060.t1;Parent=MS.gene052060.t1
chr2.2 exon 4667553 4667683 4667553 ID=MS.gene052060.t1.exon3;Parent=MS.gene052060.t1
chr2.2 CDS 4667553 4667683 4667553 ID=cds.MS.gene052060.t1;Parent=MS.gene052060.t1
chr2.2 exon 4667919 4668015 4667919 ID=MS.gene052060.t1.exon4;Parent=MS.gene052060.t1
chr2.2 CDS 4667919 4668015 4667919 ID=cds.MS.gene052060.t1;Parent=MS.gene052060.t1
chr2.2 exon 4668747 4668908 4668747 ID=MS.gene052060.t1.exon5;Parent=MS.gene052060.t1
chr2.2 CDS 4668747 4668908 4668747 ID=cds.MS.gene052060.t1;Parent=MS.gene052060.t1
chr2.2 exon 4668991 4669085 4668991 ID=MS.gene052060.t1.exon6;Parent=MS.gene052060.t1
chr2.2 CDS 4668991 4669085 4668991 ID=cds.MS.gene052060.t1;Parent=MS.gene052060.t1
chr2.2 exon 4669373 4669469 4669373 ID=MS.gene052060.t1.exon7;Parent=MS.gene052060.t1
chr2.2 CDS 4669373 4669469 4669373 ID=cds.MS.gene052060.t1;Parent=MS.gene052060.t1
Gene Sequence

>MS.gene052060

ATGGCAACAACGTATCACCAACCAGCATCCCTCGAAGAAGTTCGAACCCTATGGATAGGCGATTTACAATACTGGGTAGACGAAAACTATCTCACACACTGCTTCTCCCACACCGGCGAAGTCATCTCCATCAAAATCATCCGCAACAAAATCACCGGTCAACCAGAAGGTTATGGTTTCATCGAATTCGTCTCCCACTCTGCCGCCGAACGCGTTCTTCAAACCTACAACGGCACTCAAATGCCTGGTACCGAACAAACCTTCCGTTTAAACTGGGCTTCCTTTGGTATCGGTGAACGCCGCCCTGATGCGGGTCCAGATCATTCGATATTTGTGGGTGATTTGGCTCCGGATGTTACGGATTATTTACTACAAGAGACTTTTAGGACTCATTATGGGAGTGTTCGTGGTGCGAAGGTTGTGACTGATCCGAATACTGGGAGGAGTAAGGGGTATGGGTTTGTTAAATTTAGCGATGAGAGTGAGAGGAATCGGGCCATGTCGGAGATGAATGGTGTTTATTGTTCTACTAGACCTATGAGGATTAGTGCTGCTACCCCCAAGAAAACTACCGGGTATCAGCAAAATCCTTATGCTGCTGCTGTTGGTGCTGTTGCTGTTGCTCCTGTTGTTGCTGCTGCTCCTGTTCCTAAAGGTATAACAAAGCCCTACACTTTTTTATAATTAGGATATGTTTGGATAAGTAGTTTAATTAAGTGCTTATAGTAGCATAAGTGTTTACACTGTTGGTGTTTATTTATAAATTATTGGGCAAACCGCTATCTTGGTTTCTGGAAGTGTAACTTGCTGTAACATTGGTCATTGAATGTATCGAAATTGCAAACACATTCACAAGTGTCTCTTTTATAAGTCATTTTTATAAGTAATTTTGGTTCTCAGAATATGTTGTTAGGTAGTCAACAGAATCTGTTCTTAGGTAGTCAATTTAGTCCCCAAAATTAATAACGAAAAAGACTACGATGTGTTTGCAATTCGATGCATTTAGGGGTTATAGTTTCAGCACCTCACACATTCAAGGACCAAAATGGTTGATTTGCCACAAGGTAATCTAGATAACCTATAAATTGTTTTCATATAAGTTATATTGTTTTTGTAACTTATCCTAGATAACTTCTGGAAATAAAGTGAAATTGGCTCATGGACATGTCATAACCTGATTCCGTAAGCTCTTTCAAGCAGACTTGGAAGGGTTTATGTTCTTAGGCAAGTTCAAATAAATCAATTCAAACAACCTTTTTTGGGCAGTAAGTTTAATTAAGTGCTTATAGTATAATTGTTTATCATGTTAGTAGTGCTTATGTATAAGTTATTGGGCAAACCACTATTTAGTTTTGTGGAAGTGTAATTCATTGTCACATTGGTCTCCCTGAATGTATCGAAATTGCAAACACACACATGTCTCTTTTATAAGTCATTTTGGTTCTCGAATCTGTTCTTAGGTAGTCCTCTGTTGTCAATAGCGGTCTAACGCGGAGCGATGCGGCTGAAAACAGCCTAGCGTGTCAGAACGCGACCGAGTCGCGCGTTAGGCAAAAGCGGAACAAAAGCGGGTCAACGCGGGCAAAAAGCGGGTCAACAAAAAAATCTCATCAGAAACCACAAAATCTCATCTCTGTTCTCTGTTAATCATCCTTTTTTTACAGTCAAAATGAAGAAGAAAGGGAAGAAGTGAAAGATTGATTAGAGATCTAGAGATCTAGGAATTAATATGATCAAGATGAAGTCTAAATGTGAATGCAAAATAAAATTTTCTCATCTATATTAATACTAAATATATTTTTTTCATACTTTTTTAGTCCTTAATTAATAATATAATATTTAGTTTTAGTGTCCGCGTCATGTAAAAGCGCCCGCGTCGCGCCCGCTTACCGCGCCGCGTCAATTTTTGGGGTGGCCGCGCCGCGCCGCGTTTCCGCTTTGACAACTATGAGGTAGTCTATTAGAGCTTATCTATTGAAGTAAACAACTTATGACACTTTTCACAAGCTTTTCTCAGCTTAATTTCATAAATTCTCCAAGATAGCTTATGAAAACAACTTATAGCATATACAAACAACAATTTAACTTTATTTTCTATGTTCCTATATTAAGCTTATATATAAGCACTTATCATGATAAACGCTTGTTCTATATGCTGCAAACAAGCTGCTTATCCAAATAGGGATAGTCGCCAATTACGTTTTTCGTTTGTCAATTTAGTCCATAAAATTACTAACAGAAGAGACAATGGGGATGTTTTTGCGATTTCGATACATTTAGGGATTAGTGTCAGCGCCTCACACATTCAAGGACCAAAATGGTTGTTTTGCTGTAAGTTATTCTATAGAAAAAGATGAAATAAAGTCAAATTGTTTCGTATAAATTATAAGTTATTTTTATATGCTATCTTGGATAACTTATGGAAATAAAATGAAAGTGGCTTATGGACATGTCATAAACTGTTTTCGTAAGCTTTTTCAAACAAACTCACAAGGGTTTACTTTATACTAGTAGATAGGTTCAAATAAATTAATCCAAATAGCCCTAATTTTCAATGCAATGTGTTTTTCAGCTTTACCTTGTGAGTTATGACCATAACATTCAACAACTCTCTATTTCATATGTAGTTTTAATTCTCTATCTTTAGTGATTGAGTGTAAGAAAATTGTACATGACCGGCGTCACTATATAGTTTGTACTTGTGAATGGGTTTCTGGTTAAAGACTTACATTGTTATCTATAAGCCTGTTTGATTGAAAATTTGCCGTGTTGATGATTGATGGAATGGTACTAATTGTTGTTGTTGAGACTGTTCAAAATATGATAGAATCAGAATGGTATGTAAAGGAATTTATATTCTATCACATTCCGTCCCGTTTCTCTATTTTTCTTGTACCTATATGGGTTTAAGATGGAACTTACTTGTTTATTAATCTCCTTACAATTACATTCACTTCTCGAACTTTGGAAAGAAAGCTTTTCAACTTTTCCTTTGTATAGGCATGGTATGTTCTTATTCATAAAAAAACTATTCCATTCTATTTTTTCTTATTTCACTTGATATCCAACTTTAGCCTTGAGGTTCTAAAATTTGTATGCCTTCTTTTTACCCTACCAAGGTTATGCAATCCTTTAAATTTCAAATATTGTTAGTCATATAGATATGTATTTCATGATGTGACTAGAACCTTCCTAGGACAAAGTCTTGCATTTGAAGTTGAAACTTTGATCTTTTTGGTGTTCTGATATTTTGATTTAGTACAACTTAGGAAAGATACTTATCTATGATTTCCTTGGCAGCAATATATCCAGTGCCGGCATACACCGCCCCAGTGAATACAGTTCCACCAGAATACGATGTAAACAATACGACTGTAAGTCCTGTAGCCGTAACATTTTTGAAATTTTCATTTCCTATGGTGCTCTTACATACTTTTGCAATGCAGATTTATGTTGGTAATTTGGATCTTAATGTCTCAGAGGAGGAGCTGAAGCAAAACTTTTTGCAATTTGGAGAGATTGTTTCTGTCAAAGTTCATCCCGGCAAAGCATGTGGTTTTGTTCAATTTGGGGCTAGGTCTTCTTTTCCTCTCTAATCTCTTTTTAAGCATTGAAGTGTTTTTGTGATTTTTTTTTTAAAATTGTACCTAAAAAGTAATGATAAGATTTTGATATGTTGCCTCTCAAAGGAAATAAGTTTCACGTGGCCCTAATTTACCATGCATCTTGAGTATTTTTACGATCTTTATATTTTTTCCTTAATTCTATTATGTGAATGTTCATTTAATCTTTCTCATATCTGATGTCTGTAGAGCATCTGCTGAAGAAGCCATTCAGAAGATGCAGGGAAAGATATTAGGTCAACAAATGATCCGAGTTTCTTGGGGTAGGCCCCAAACAGCTAGACAGGTATTTTTTCTTTAGAAATGGTTCATTTCTTTACAAAGTACTTAAGCTATAGCCTTGTGCATTTGTGTATATCAATCATTTCAATTTCAGATATTCTTTCACTGTAGAATCATAGATTACAAATCGTCCATATTTGTTTAGGTTTTTAACATAGGACCCATACATGGGGTTCTATTCTAGTATAATTTTTATTGCCCTTTTTATGTATTGTTATGCTTTTATGTAGAAGTTTGTTTGTTAGGACATGTGTGGAAAATATTCTAGATTCTAGTTCTACTGAGCAATCTTGAAATTGTGAAGGTTTGGCAACTTGTGAATGGCCAATGTGGGACATTGAGAGACCCTTACATGGGTCAATACTTAATGGTTAAAGACTAAAACAGGAAATGATATCCCAGGAGTCATATGTATAGATATGGTTGTTGAAGGTTCAGTAAAAAAGTTAGACTGTAACAATAGATATGTATTGATATGGAGGACGTCAATTAGTGTTTATTGATAATTCGAATTTAGGCTTGGTATTCTTGATTCTTGATGTATAATTTGCTAATATTAGCAACGACCCCTTGTGATAACTACAAACTTCCATCATAACAAACTTTATCTAAATATTAAAAATACTTGAGATTATATGTCAGTGAGTTTTGATATCTCTGATTAGTTCTATAAGTGTCTCATCATGTTTGAAGTGTTATATTTGCACTAATAAATTTGGTTCTAAATGGTTCTAGGACGTACCTGGAGGATGGGGACAACAGGTGGATCAAAGTCAATGGAGTGCATACTATGGGTATGGACAGCCGGGTTATGAAGCTTATGCATATGGGGCTGCTCAGGATCCTTCAATGTATGCATATGCTGGATATGCTGGCTATGCACAATACCCGCAACAGGTAAGTTATATAATTTTAAATTTACATATTGCATTGGTTCATATTGAAGGGAATGACTTTATCTGACTACTTATGTTCGTAGGTTGAAGGTGCTCAAGACGTATCAGCTATGTCTGTGCCTACCTTGGAACAAAGGGAAGAGTTGTATGATCCTCTGGCAATGCCCGATGTTGATAAGTAATTTCCCTCCTTTCTTTTTATAACATGGGAGATAAACAACTGAACACGAGATATTGACGGATCCGGATTGTATGCAGTCTTGCAGTCGGTCCATTTCTGACCATCCGACGGCCCAGATTTAAATCTCATATTTAGATTTAATAAAACGAATACAATCTGCTTTAAATATAGACCATCCGATCTAAATCGGACGGCAAAAAAGGGCCGACTGCATGATTGCATGTAATCTGGATCCCATATTGACTTCATGTGCATTTCTGACATGTCCTTGATTGCTTTGCCAGGTTAAATGCTGCATATCTCTCAGTCCACGGAAATGCCATTTTAGGGCGGTCCCTCTGGCACAAAACCCATTCCTCATCCTTGCAGCAGCAAGCTTAG
Protein sequence

>MS.gene052060.t1

MATTYHQPASLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTTGYQQNPYAAAVGAVAVAPVVAAAPVPKAIYPVPAYTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQMIRVSWGRPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYEAYAYGAAQDPSMYAYAGYAGYAQYPQQVEGAQDVSAMSVPTLEQREELYDPLAMPDVDKLNAAYLSVHGNAILGRSLWHKTHSSSLQQQA