Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052744.t1 | XP_013455158.1 | 99.4 | 495 | 3 | 0 | 1 | 495 | 1 | 495 | 5.40E-277 | 963 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052744.t1 | O80437 | 78.8 | 490 | 102 | 1 | 7 | 494 | 10 | 499 | 1.3e-226 | 786.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052744.t1 | A0A072UIH6 | 99.4 | 495 | 3 | 0 | 1 | 495 | 1 | 495 | 3.9e-277 | 963.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052744 | MS.gene33484 | 0.853129 | 2.93E-61 | -1.69E-46 |
| MS.gene052744 | MS.gene89900 | 0.851991 | 6.19E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene052744 | MS.gene84826 | PPI |
| MS.gene052744 | MS.gene056794 | PPI |
| MS.gene052744 | MS.gene019646 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052744.t1 | MTR_4g415290 | 99.394 | 495 | 3 | 0 | 1 | 495 | 1 | 495 | 0.0 | 1000 |
| MS.gene052744.t1 | MTR_7g067380 | 84.242 | 495 | 76 | 2 | 1 | 494 | 3 | 496 | 0.0 | 854 |
| MS.gene052744.t1 | MTR_8g030620 | 62.118 | 491 | 179 | 5 | 7 | 491 | 10 | 499 | 0.0 | 633 |
| MS.gene052744.t1 | MTR_1g040500 | 57.895 | 494 | 200 | 5 | 7 | 494 | 6 | 497 | 0.0 | 590 |
| MS.gene052744.t1 | MTR_5g080360 | 51.046 | 478 | 224 | 4 | 21 | 492 | 2 | 475 | 3.00e-164 | 474 |
| MS.gene052744.t1 | MTR_5g091660 | 50.713 | 491 | 226 | 7 | 7 | 491 | 51 | 531 | 7.03e-163 | 472 |
| MS.gene052744.t1 | MTR_3g448430 | 46.830 | 489 | 241 | 8 | 8 | 489 | 35 | 511 | 2.72e-150 | 439 |
| MS.gene052744.t1 | MTR_1g086650 | 43.542 | 480 | 254 | 8 | 17 | 489 | 60 | 529 | 2.61e-127 | 381 |
| MS.gene052744.t1 | MTR_5g061520 | 42.387 | 486 | 265 | 8 | 15 | 494 | 10 | 486 | 2.13e-121 | 364 |
| MS.gene052744.t1 | MTR_3g048330 | 52.837 | 282 | 120 | 3 | 220 | 493 | 1 | 277 | 1.16e-99 | 301 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052744.t1 | AT2G38110 | 80.000 | 485 | 95 | 1 | 7 | 489 | 10 | 494 | 0.0 | 791 |
| MS.gene052744.t1 | AT4G00400 | 61.680 | 488 | 181 | 5 | 7 | 491 | 10 | 494 | 0.0 | 605 |
| MS.gene052744.t1 | AT1G01610 | 61.382 | 492 | 183 | 6 | 7 | 494 | 10 | 498 | 0.0 | 598 |
| MS.gene052744.t1 | AT3G11430 | 51.346 | 483 | 213 | 5 | 19 | 489 | 9 | 481 | 7.25e-166 | 478 |
| MS.gene052744.t1 | AT5G06090 | 48.560 | 486 | 222 | 6 | 19 | 489 | 7 | 479 | 1.13e-152 | 445 |
| MS.gene052744.t1 | AT1G06520 | 44.961 | 516 | 248 | 11 | 5 | 490 | 76 | 585 | 6.27e-147 | 433 |
| MS.gene052744.t1 | AT1G02390 | 39.468 | 489 | 276 | 9 | 16 | 490 | 46 | 528 | 1.31e-110 | 338 |
| MS.gene052744.t1 | AT4G01950 | 39.351 | 493 | 269 | 11 | 17 | 492 | 41 | 520 | 7.28e-108 | 331 |
| MS.gene052744.t1 | AT4G01950 | 39.351 | 493 | 269 | 11 | 17 | 492 | 69 | 548 | 1.45e-107 | 331 |
| MS.gene052744.t1 | AT3G11325 | 49.237 | 262 | 100 | 1 | 228 | 489 | 144 | 372 | 9.68e-84 | 264 |
| MS.gene052744.t1 | AT3G11325 | 37.143 | 105 | 66 | 0 | 31 | 135 | 9 | 113 | 2.40e-16 | 81.3 |
| MS.gene052744.t1 | AT3G11325 | 49.237 | 262 | 100 | 1 | 228 | 489 | 141 | 369 | 1.37e-83 | 264 |
| MS.gene052744.t1 | AT3G11325 | 37.143 | 105 | 66 | 0 | 31 | 135 | 6 | 110 | 2.67e-16 | 81.3 |
Find 110 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCCTTCCTTGTTAAAT+TGG | 0.158055 | 4.4:-85365765 | None:intergenic |
| GAGGCAGTTATGAAAGAATT+TGG | 0.160182 | 4.4:+85361841 | MS.gene052744:CDS |
| CTACCCTCATGGAAAATAAT+TGG | 0.172378 | 4.4:-85365035 | None:intergenic |
| TTGCACTCTTAACCTTCTTA+TGG | 0.235930 | 4.4:+85365084 | MS.gene052744:CDS |
| GAATCATACTTTCAATCTTA+AGG | 0.293063 | 4.4:+85365117 | MS.gene052744:CDS |
| GAGTAACAATTTGCCTGATT+TGG | 0.303564 | 4.4:+85361864 | MS.gene052744:CDS |
| AATTATATTCAAAGGGTTCT+TGG | 0.305203 | 4.4:+85365719 | MS.gene052744:CDS |
| AGAAGCTTGTTTCTTGGTAA+TGG | 0.311340 | 4.4:-85365008 | None:intergenic |
| GATAAGTATGCTATTCTTGC+AGG | 0.334585 | 4.4:+85365782 | MS.gene052744:CDS |
| GGGCTTAGAAGCTTGTTTCT+TGG | 0.336364 | 4.4:-85365014 | None:intergenic |
| TTTCTTGAATCAGTTGCCTT+TGG | 0.341998 | 4.4:+85365655 | MS.gene052744:CDS |
| AGTAACAATTTGCCTGATTT+GGG | 0.342680 | 4.4:+85361865 | MS.gene052744:CDS |
| AATCATACTTTCAATCTTAA+GGG | 0.343266 | 4.4:+85365118 | MS.gene052744:CDS |
| CACATTACAGGAAGGATATA+TGG | 0.345834 | 4.4:+85364965 | MS.gene052744:intron |
| AGGGTTCTTGGAGGGACTCT+TGG | 0.352717 | 4.4:+85365731 | MS.gene052744:CDS |
| GGATTCATGAACACAAAATA+AGG | 0.356896 | 4.4:-85365611 | None:intergenic |
| CCAAGGTCTCGGAGACAAAT+AGG | 0.357156 | 4.4:-85361516 | None:intergenic |
| TTTGTGCTACATTTGGAAAT+TGG | 0.360873 | 4.4:-85361337 | None:intergenic |
| GAAGCTTGTTTCTTGGTAAT+GGG | 0.362820 | 4.4:-85365007 | None:intergenic |
| TGGAAAGTGTTCAATTCGTT+CGG | 0.372012 | 4.4:+85361652 | MS.gene052744:CDS |
| AGGCAGTTATGAAAGAATTT+GGG | 0.373459 | 4.4:+85361842 | MS.gene052744:CDS |
| TTGAACACTTTCCATGTCTC+TGG | 0.382477 | 4.4:-85361643 | None:intergenic |
| TCTCTACAAGTCGTTCCTTC+CGG | 0.391720 | 4.4:-85365464 | None:intergenic |
| TAAAAGCCGTTGCGCTTTCA+AGG | 0.395510 | 4.4:+85365378 | MS.gene052744:CDS |
| GTTGTTACAGGAGTTGCATT+AGG | 0.400843 | 4.4:+85365296 | MS.gene052744:CDS |
| CCGGATCTAAAACTGTTCTA+TGG | 0.400923 | 4.4:-85365274 | None:intergenic |
| TTGGAAATTGGTGGGAAAAG+TGG | 0.411232 | 4.4:-85361325 | None:intergenic |
| TGGTACAATTATAAATTACT+TGG | 0.415906 | 4.4:+85365176 | MS.gene052744:CDS |
| ACCTTCTTATGGATGCCAAT+TGG | 0.419088 | 4.4:+85365095 | MS.gene052744:CDS |
| AAGGGCAAGTGGGTTTGTTA+AGG | 0.423177 | 4.4:+85361786 | MS.gene052744:CDS |
| TACCCTCATGGAAAATAATT+GGG | 0.425087 | 4.4:-85365034 | None:intergenic |
| GGAAAGTGTTCAATTCGTTC+GGG | 0.425126 | 4.4:+85361653 | MS.gene052744:CDS |
| AGTGCGACGAGCATGTAGTA+TGG | 0.432920 | 4.4:-85361427 | None:intergenic |
| CACGGCTAGTCCAAGGTTGA+TGG | 0.435779 | 4.4:+85361690 | MS.gene052744:CDS |
| GTAGAGAACCATTTCTATTG+AGG | 0.438636 | 4.4:+85365480 | MS.gene052744:CDS |
| GCACTAAACCTCAATAGAAA+TGG | 0.442088 | 4.4:-85365488 | None:intergenic |
| ATTGAAAGTATGATTCCAAT+TGG | 0.443499 | 4.4:-85365110 | None:intergenic |
| CTGTCTCCCAGTCCCAAATC+AGG | 0.448486 | 4.4:-85361877 | None:intergenic |
| CAATTTGCCTGATTTGGGAC+TGG | 0.449611 | 4.4:+85361870 | MS.gene052744:CDS |
| ATGCTCGTCGCACTCGAAGC+TGG | 0.455449 | 4.4:+85361436 | MS.gene052744:CDS |
| AAGAGTGCAAATAGAGGGGT+TGG | 0.455638 | 4.4:-85365071 | None:intergenic |
| TCCAATTGGCATCCATAAGA+AGG | 0.458669 | 4.4:-85365096 | None:intergenic |
| GGTGCTAGGGACTGAATTGA+TGG | 0.464183 | 4.4:+85361750 | MS.gene052744:CDS |
| AATTTGCCTGATTTGGGACT+GGG | 0.468437 | 4.4:+85361871 | MS.gene052744:CDS |
| AATGGGTCACATTTAGTCCT+TGG | 0.469115 | 4.4:-85364990 | None:intergenic |
| AAGGAACCAGGAGTTCTTGT+TGG | 0.472018 | 4.4:+85361805 | MS.gene052744:CDS |
| TGCTTCGTATTAATCGCGAC+AGG | 0.478003 | 4.4:-85365542 | None:intergenic |
| TTTCTCGGTCAGTGTTGCCT+AGG | 0.478351 | 4.4:+85361599 | MS.gene052744:CDS |
| CTAAGTCGGATGCCACGGTT+TGG | 0.479842 | 4.4:-85361372 | None:intergenic |
| TTGTCACATTCGCGGGGCTA+AGG | 0.481220 | 4.4:+85361557 | MS.gene052744:CDS |
| TTGGGAGTTGATAAGGTGCT+AGG | 0.488561 | 4.4:+85361736 | MS.gene052744:CDS |
| GAAATATACGAAAGGGACTA+AGG | 0.490330 | 4.4:-85361488 | None:intergenic |
| CCTTTGGAATTGACTTGCAG+TGG | 0.493619 | 4.4:+85365671 | MS.gene052744:CDS |
| TTAATCTTTGTCACATTCGC+GGG | 0.496943 | 4.4:+85361550 | MS.gene052744:CDS |
| ATAAAGAAATTGCTTGAAGA+AGG | 0.497977 | 4.4:+85365425 | MS.gene052744:CDS |
| GGCTCGCGGACACAAATTGT+TGG | 0.498712 | 4.4:+85365586 | MS.gene052744:CDS |
| AATGCAACTCCTGTAACAAC+CGG | 0.501114 | 4.4:-85365293 | None:intergenic |
| AGTTGCAAATTATATTCAAA+GGG | 0.504087 | 4.4:+85365712 | MS.gene052744:CDS |
| AAGTTGCAAATTATATTCAA+AGG | 0.504845 | 4.4:+85365711 | MS.gene052744:CDS |
| TGTTCACCAACAAGAACTCC+TGG | 0.509031 | 4.4:-85361811 | None:intergenic |
| AAGAAAGTGATCTCATAAGT+TGG | 0.509395 | 4.4:-85365638 | None:intergenic |
| GCTATTCTTGCAGGAACAGA+TGG | 0.510039 | 4.4:+85365791 | MS.gene052744:CDS |
| GGAATAAGAGTAATTAGAAA+AGG | 0.510705 | 4.4:+85365197 | MS.gene052744:CDS |
| CCTATTTGTCTCCGAGACCT+TGG | 0.512360 | 4.4:+85361516 | MS.gene052744:CDS |
| AGGTTAAGAGTGCAAATAGA+GGG | 0.520148 | 4.4:-85365076 | None:intergenic |
| AGGTGACTTAGTGATTTGTC+CGG | 0.526292 | 4.4:+85365445 | MS.gene052744:CDS |
| AAGACGTGGAGATTGTTTCT+CGG | 0.526609 | 4.4:+85361584 | MS.gene052744:CDS |
| AAGGTTAAGAGTGCAAATAG+AGG | 0.530421 | 4.4:-85365077 | None:intergenic |
| GCCATCTAAGTCGGATGCCA+CGG | 0.531497 | 4.4:-85361377 | None:intergenic |
| TGACTTCATGTCTATTTGCA+AGG | 0.531565 | 4.4:+85361912 | MS.gene052744:CDS |
| TGGGAGTTGATAAGGTGCTA+GGG | 0.533942 | 4.4:+85361737 | MS.gene052744:CDS |
| TTTGGACTAATCTACCCTCA+TGG | 0.536748 | 4.4:-85365046 | None:intergenic |
| ACCGTGGCATCCGACTTAGA+TGG | 0.545805 | 4.4:+85361376 | MS.gene052744:CDS |
| ATATTCAAAGGGTTCTTGGA+GGG | 0.546066 | 4.4:+85365723 | MS.gene052744:CDS |
| TGTTGGTGAACACAAGAAAG+AGG | 0.548662 | 4.4:+85361822 | MS.gene052744:CDS |
| TGCTACATTTGGAAATTGGT+GGG | 0.549882 | 4.4:-85361333 | None:intergenic |
| AGTGGGTTTGTTAAGGAACC+AGG | 0.551989 | 4.4:+85361793 | MS.gene052744:CDS |
| AATGGCTCAACCATCAACCT+TGG | 0.553342 | 4.4:-85361700 | None:intergenic |
| TGTCTCTGGATGCACGTCCT+CGG | 0.553696 | 4.4:-85361629 | None:intergenic |
| GGTACGTGAAATATACGAAA+GGG | 0.556590 | 4.4:-85361495 | None:intergenic |
| ATGTACCAATTTAACAAGGA+AGG | 0.557734 | 4.4:+85365760 | MS.gene052744:CDS |
| TATATTCAAAGGGTTCTTGG+AGG | 0.558009 | 4.4:+85365722 | MS.gene052744:CDS |
| ATGCACTTCTCGACACGAGA+AGG | 0.561175 | 4.4:-85361402 | None:intergenic |
| AAAAGCCGTTGCGCTTTCAA+GGG | 0.561930 | 4.4:+85365379 | MS.gene052744:CDS |
| TGGAATTGACTTGCAGTGGA+GGG | 0.564415 | 4.4:+85365675 | MS.gene052744:CDS |
| TTGGAATTGACTTGCAGTGG+AGG | 0.574024 | 4.4:+85365674 | MS.gene052744:CDS |
| GACAATCCTATCCGTTAACT+CGG | 0.578226 | 4.4:-85365519 | None:intergenic |
| ATTAATCTTTGTCACATTCG+CGG | 0.578687 | 4.4:+85361549 | MS.gene052744:CDS |
| GTGCTACATTTGGAAATTGG+TGG | 0.579404 | 4.4:-85361334 | None:intergenic |
| GTGATCTCATAAGTTGGCAT+AGG | 0.582217 | 4.4:-85365632 | None:intergenic |
| GGTTAAGAGTGCAAATAGAG+GGG | 0.592460 | 4.4:-85365075 | None:intergenic |
| TGCACTTCTCGACACGAGAA+GGG | 0.595911 | 4.4:-85361401 | None:intergenic |
| AGGACGTGCATCCAGAGACA+TGG | 0.604083 | 4.4:+85361632 | MS.gene052744:CDS |
| TCTTTCCCTTGAAAGCGCAA+CGG | 0.605263 | 4.4:-85365384 | None:intergenic |
| AGGTACGTGAAATATACGAA+AGG | 0.608258 | 4.4:-85361496 | None:intergenic |
| ACATTGTCACGGCTAGTCCA+AGG | 0.617998 | 4.4:+85361683 | MS.gene052744:CDS |
| GAGAAGGGTGCCATCTAAGT+CGG | 0.618025 | 4.4:-85361386 | None:intergenic |
| GTTGCCTAGGTTCTATGCCG+AGG | 0.628644 | 4.4:+85361612 | MS.gene052744:CDS |
| GCTTCGTATTAATCGCGACA+GGG | 0.633339 | 4.4:-85365541 | None:intergenic |
| CCACTGCAAGTCAATTCCAA+AGG | 0.642771 | 4.4:-85365671 | None:intergenic |
| GACTTAGTGATTTGTCCGGA+AGG | 0.655073 | 4.4:+85365449 | MS.gene052744:CDS |
| ACGTCCTCGGCATAGAACCT+AGG | 0.656526 | 4.4:-85361616 | None:intergenic |
| AATTGGTGGGAAAAGTGGAA+AGG | 0.657733 | 4.4:-85361320 | None:intergenic |
| TTGAATGTACCAATTTAACA+AGG | 0.660163 | 4.4:+85365756 | MS.gene052744:CDS |
| AGGAAGGATATATGGTACCA+AGG | 0.669013 | 4.4:+85364973 | MS.gene052744:intron |
| TAATCTTTGTCACATTCGCG+GGG | 0.673980 | 4.4:+85361551 | MS.gene052744:CDS |
| CGGGAAACGATACATTGTCA+CGG | 0.691995 | 4.4:+85361672 | MS.gene052744:CDS |
| AGATAGATCAAACCAAACCG+TGG | 0.705896 | 4.4:+85361360 | MS.gene052744:CDS |
| GGGGCTAAGGATAAAAGACG+TGG | 0.717767 | 4.4:+85361570 | MS.gene052744:CDS |
| AAGGGAAAGAGATAGAGATG+CGG | 0.731861 | 4.4:+85365397 | MS.gene052744:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATACATAGTT+AGG | - | chr4.4:85364449-85364468 | None:intergenic | 10.0% |
| !! | ATCTAACATATTATATAATT+TGG | - | chr4.4:85362001-85362020 | None:intergenic | 10.0% |
| !! | TGATGATTATTAAATTATAT+CGG | + | chr4.4:85363339-85363358 | MS.gene052744:intron | 10.0% |
| !! | TTATATAATATGTTAGATTA+TGG | + | chr4.4:85362003-85362022 | MS.gene052744:intron | 10.0% |
| !! | ATAACAAAAATATACATGAA+TGG | - | chr4.4:85362399-85362418 | None:intergenic | 15.0% |
| !! | TAAAATTGAGAAATCAAAAT+AGG | - | chr4.4:85363061-85363080 | None:intergenic | 15.0% |
| !! | TATAAAACATCAATAAAGTT+AGG | - | chr4.4:85363592-85363611 | None:intergenic | 15.0% |
| !! | TTGGTCAATATAATTTAAAA+CGG | + | chr4.4:85362210-85362229 | MS.gene052744:intron | 15.0% |
| !! | TTTCTTCTTCTATATATTAT+TGG | - | chr4.4:85363755-85363774 | None:intergenic | 15.0% |
| !! | TTTGATTAATCAAAATCTAA+TGG | + | chr4.4:85362447-85362466 | MS.gene052744:intron | 15.0% |
| !!! | ATTTTCATACATTTTTTATG+TGG | - | chr4.4:85364098-85364117 | None:intergenic | 15.0% |
| !!! | TTTTTAGTTGTTACAAATTA+AGG | + | chr4.4:85362677-85362696 | MS.gene052744:intron | 15.0% |
| !!! | TTTTTTTTTGAAGAATAGTT+AGG | - | chr4.4:85364418-85364437 | None:intergenic | 15.0% |
| !! | AAATAAAATTTAGGAAGTCT+AGG | - | chr4.4:85364164-85364183 | None:intergenic | 20.0% |
| !! | AACAAGGACAAATAAAATTT+AGG | - | chr4.4:85364173-85364192 | None:intergenic | 20.0% |
| !! | AAGTTGCAAATTATATTCAA+AGG | + | chr4.4:85365711-85365730 | MS.gene052744:CDS | 20.0% |
| !! | AATAAAATTTAGGAAGTCTA+GGG | - | chr4.4:85364163-85364182 | None:intergenic | 20.0% |
| !! | AATCATACTTTCAATCTTAA+GGG | + | chr4.4:85365118-85365137 | MS.gene052744:CDS | 20.0% |
| !! | AGAAAAGAAAAAAAAGAACA+AGG | - | chr4.4:85364189-85364208 | None:intergenic | 20.0% |
| !! | AGAAATAATTAGACAATGTT+TGG | - | chr4.4:85364945-85364964 | None:intergenic | 20.0% |
| !! | AGTTGCAAATTATATTCAAA+GGG | + | chr4.4:85365712-85365731 | MS.gene052744:CDS | 20.0% |
| !! | CAATTATAAAATCAGTTCTA+GGG | + | chr4.4:85363799-85363818 | MS.gene052744:intron | 20.0% |
| !! | CAGATAGATATTGATATATT+AGG | - | chr4.4:85362350-85362369 | None:intergenic | 20.0% |
| !! | TGGTACAATTATAAATTACT+TGG | + | chr4.4:85365176-85365195 | MS.gene052744:CDS | 20.0% |
| !! | TTATGATAACTTTATGAGTT+TGG | - | chr4.4:85364386-85364405 | None:intergenic | 20.0% |
| !!! | AACTTTAGAGAACAAAAAAA+TGG | - | chr4.4:85363564-85363583 | None:intergenic | 20.0% |
| !!! | ACTTTATGTATATGTTTTTG+TGG | + | chr4.4:85362850-85362869 | MS.gene052744:intron | 20.0% |
| !!! | ATGACTTTTATGAAATGATT+TGG | + | chr4.4:85362971-85362990 | MS.gene052744:intron | 20.0% |
| !!! | ATTATACTGAAAGATAGTTT+TGG | - | chr4.4:85362657-85362676 | None:intergenic | 20.0% |
| !!! | ATTTATTTTTCATGTTTCTG+TGG | + | chr4.4:85362373-85362392 | MS.gene052744:intron | 20.0% |
| !!! | CTTTATGTATATGTTTTTGT+GGG | + | chr4.4:85362851-85362870 | MS.gene052744:intron | 20.0% |
| !!! | GTTAATTTTCACCTTTTAAT+TGG | + | chr4.4:85362043-85362062 | MS.gene052744:intron | 20.0% |
| !!! | TCAATATAATTTAAAACGGA+TGG | + | chr4.4:85362214-85362233 | MS.gene052744:intron | 20.0% |
| !!! | TGACTTTTATGAAATGATTT+GGG | + | chr4.4:85362972-85362991 | MS.gene052744:intron | 20.0% |
| !!! | TGTTTTTTTCAATCTAACTT+GGG | + | chr4.4:85362884-85362903 | MS.gene052744:intron | 20.0% |
| !!! | TTCAAATTTCTGTTTTAGAT+GGG | + | chr4.4:85363252-85363271 | MS.gene052744:intron | 20.0% |
| !!! | TTTATGTATATGTTTTTGTG+GGG | + | chr4.4:85362852-85362871 | MS.gene052744:intron | 20.0% |
| !!! | TTTCAAATTTCTGTTTTAGA+TGG | + | chr4.4:85363251-85363270 | MS.gene052744:intron | 20.0% |
| !!! | TTTTATAGGCGAAATTATTT+CGG | - | chr4.4:85365363-85365382 | None:intergenic | 20.0% |
| ! | AAATTATCAGTTCATAGACT+AGG | - | chr4.4:85364497-85364516 | None:intergenic | 25.0% |
| ! | AAGTTATCCTAAAAAGCTTA+TGG | - | chr4.4:85364796-85364815 | None:intergenic | 25.0% |
| ! | AATTATATTCAAAGGGTTCT+TGG | + | chr4.4:85365719-85365738 | MS.gene052744:CDS | 25.0% |
| ! | AATTGGAAGATATCCAATTA+GGG | - | chr4.4:85363784-85363803 | None:intergenic | 25.0% |
| ! | AGACATAAATTTAAGGAAAG+AGG | - | chr4.4:85363429-85363448 | None:intergenic | 25.0% |
| ! | ATAAAATTTAGGAAGTCTAG+GGG | - | chr4.4:85364162-85364181 | None:intergenic | 25.0% |
| ! | ATAAAGAAATTGCTTGAAGA+AGG | + | chr4.4:85365425-85365444 | MS.gene052744:CDS | 25.0% |
| ! | ATGTGAGATTAAGGATTTAA+AGG | + | chr4.4:85363015-85363034 | MS.gene052744:intron | 25.0% |
| ! | ATTTGTGAATGCCAATTAAA+AGG | - | chr4.4:85362057-85362076 | None:intergenic | 25.0% |
| ! | CCAATTATAAAATCAGTTCT+AGG | + | chr4.4:85363798-85363817 | MS.gene052744:intron | 25.0% |
| ! | CGAAAACAGACATAAATTTA+AGG | - | chr4.4:85363436-85363455 | None:intergenic | 25.0% |
| ! | GAAGAAAAAAAATCCCTAAT+TGG | + | chr4.4:85363768-85363787 | MS.gene052744:intron | 25.0% |
| ! | GAATCATACTTTCAATCTTA+AGG | + | chr4.4:85365117-85365136 | MS.gene052744:CDS | 25.0% |
| ! | GACTCTAATATTAACACTTA+AGG | - | chr4.4:85362826-85362845 | None:intergenic | 25.0% |
| ! | GGAATAAGAGTAATTAGAAA+AGG | + | chr4.4:85365197-85365216 | MS.gene052744:CDS | 25.0% |
| ! | GGATATAGAGATGTTAAAAT+GGG | - | chr4.4:85363886-85363905 | None:intergenic | 25.0% |
| ! | GTTTGTTTAAGAGTTTAAGA+GGG | - | chr4.4:85362804-85362823 | None:intergenic | 25.0% |
| ! | TAAAGATAGAAAAAGACAGA+TGG | - | chr4.4:85363506-85363525 | None:intergenic | 25.0% |
| ! | TAATTGGAAGATATCCAATT+AGG | - | chr4.4:85363785-85363804 | None:intergenic | 25.0% |
| ! | TGGATATAGAGATGTTAAAA+TGG | - | chr4.4:85363887-85363906 | None:intergenic | 25.0% |
| ! | TGTGAGATTAAGGATTTAAA+GGG | + | chr4.4:85363016-85363035 | MS.gene052744:intron | 25.0% |
| ! | TTAGTTGTTACAAATTAAGG+AGG | + | chr4.4:85362680-85362699 | MS.gene052744:intron | 25.0% |
| ! | TTGAATGTACCAATTTAACA+AGG | + | chr4.4:85365756-85365775 | MS.gene052744:CDS | 25.0% |
| ! | TTTGTTTAAGAGTTTAAGAG+GGG | - | chr4.4:85362803-85362822 | None:intergenic | 25.0% |
| !! | AGTCATATTTCACAAGTTTT+AGG | - | chr4.4:85362957-85362976 | None:intergenic | 25.0% |
| !! | ATTGAAAGTATGATTCCAAT+TGG | - | chr4.4:85365113-85365132 | None:intergenic | 25.0% |
| !! | CATTTTATCATACTGTCATA+TGG | - | chr4.4:85364332-85364351 | None:intergenic | 25.0% |
| !! | CTAATTATTTCTCACATTAC+AGG | + | chr4.4:85364953-85364972 | MS.gene052744:intron | 25.0% |
| !! | CTTATTTCCATAAGCTTTTT+AGG | + | chr4.4:85364786-85364805 | MS.gene052744:intron | 25.0% |
| !! | GTTTTCGTGTATAATTTTTC+CGG | + | chr4.4:85363449-85363468 | MS.gene052744:intron | 25.0% |
| !!! | AAGCAATTTTTTCAGGTAAA+GGG | - | chr4.4:85365157-85365176 | None:intergenic | 25.0% |
| !!! | AAGTTTGTTTTATGGAACAT+CGG | + | chr4.4:85365565-85365584 | MS.gene052744:CDS | 25.0% |
| !!! | AATTGACTAGTATTTTAGCT+TGG | - | chr4.4:85363831-85363850 | None:intergenic | 25.0% |
| !!! | ATTGACTAGTATTTTAGCTT+GGG | - | chr4.4:85363830-85363849 | None:intergenic | 25.0% |
| !!! | CCATTTGTTAAGACATTTTT+GGG | + | chr4.4:85361718-85361737 | MS.gene052744:CDS | 25.0% |
| !!! | CCTAGAACTGATTTTATAAT+TGG | - | chr4.4:85363801-85363820 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTTCAATCTAACT+TGG | + | chr4.4:85362883-85362902 | MS.gene052744:intron | 25.0% |
| !!! | TTATGTATATGTTTTTGTGG+GGG | + | chr4.4:85362853-85362872 | MS.gene052744:intron | 25.0% |
| AAGAAAGTGATCTCATAAGT+TGG | - | chr4.4:85365641-85365660 | None:intergenic | 30.0% | |
| ACAATAACTAAGCTCTCTTT+GGG | + | chr4.4:85362495-85362514 | MS.gene052744:intron | 30.0% | |
| ACCCAACATCAAAAAATTAG+GGG | - | chr4.4:85363365-85363384 | None:intergenic | 30.0% | |
| AGGCAGTTATGAAAGAATTT+GGG | + | chr4.4:85361842-85361861 | MS.gene052744:CDS | 30.0% | |
| AGTAACAATTTGCCTGATTT+GGG | + | chr4.4:85361865-85361884 | MS.gene052744:CDS | 30.0% | |
| ATGAACTGATAATTTCCACA+TGG | + | chr4.4:85364502-85364521 | MS.gene052744:intron | 30.0% | |
| ATGTACCAATTTAACAAGGA+AGG | + | chr4.4:85365760-85365779 | MS.gene052744:CDS | 30.0% | |
| ATTAATCTTTGTCACATTCG+CGG | + | chr4.4:85361549-85361568 | MS.gene052744:CDS | 30.0% | |
| CAATAAACACGATACTGATA+TGG | + | chr4.4:85363644-85363663 | MS.gene052744:intron | 30.0% | |
| CACCCAACATCAAAAAATTA+GGG | - | chr4.4:85363366-85363385 | None:intergenic | 30.0% | |
| CATAAATTTAAGGAAAGAGG+AGG | - | chr4.4:85363426-85363445 | None:intergenic | 30.0% | |
| CCCAAAAATGTCTTAACAAA+TGG | - | chr4.4:85361721-85361740 | None:intergenic | 30.0% | |
| CTAGTCTACTACATAGTAAT+AGG | - | chr4.4:85364045-85364064 | None:intergenic | 30.0% | |
| CTTATCCTTCCTTGTTAAAT+TGG | - | chr4.4:85365768-85365787 | None:intergenic | 30.0% | |
| CTTTACCTGAAAAAATTGCT+TGG | + | chr4.4:85365156-85365175 | MS.gene052744:CDS | 30.0% | |
| GGATTCATGAACACAAAATA+AGG | - | chr4.4:85365614-85365633 | None:intergenic | 30.0% | |
| GTGAGATTAAGGATTTAAAG+GGG | + | chr4.4:85363017-85363036 | MS.gene052744:intron | 30.0% | |
| TACCCTCATGGAAAATAATT+GGG | - | chr4.4:85365037-85365056 | None:intergenic | 30.0% | |
| TCACCCAACATCAAAAAATT+AGG | - | chr4.4:85363367-85363386 | None:intergenic | 30.0% | |
| TCTACTACATAGTAATAGGT+TGG | - | chr4.4:85364041-85364060 | None:intergenic | 30.0% | |
| TTAAAAAGGGAAGGATGAAA+TGG | - | chr4.4:85362771-85362790 | None:intergenic | 30.0% | |
| TTCTAGATATCACAGATTCA+GGG | + | chr4.4:85364205-85364224 | MS.gene052744:intron | 30.0% | |
| TTTCTAGATATCACAGATTC+AGG | + | chr4.4:85364204-85364223 | MS.gene052744:intron | 30.0% | |
| TTTGTGCTACATTTGGAAAT+TGG | - | chr4.4:85361340-85361359 | None:intergenic | 30.0% | |
| TTTGTGTAGATGTGAGATTA+AGG | + | chr4.4:85363006-85363025 | MS.gene052744:intron | 30.0% | |
| ! | CAAAACAGTTAAGGTTTTCT+AGG | + | chr4.4:85364555-85364574 | MS.gene052744:intron | 30.0% |
| ! | GAATTGATGGTTACAAAAAC+AGG | + | chr4.4:85361763-85361782 | MS.gene052744:CDS | 30.0% |
| ! | GGTTTGTTTAAGAGTTTAAG+AGG | - | chr4.4:85362805-85362824 | None:intergenic | 30.0% |
| ! | TCTATCTTTTGTGCTACATT+TGG | - | chr4.4:85361347-85361366 | None:intergenic | 30.0% |
| ! | TTATTTCTCACATTACAGGA+AGG | + | chr4.4:85364957-85364976 | MS.gene052744:intron | 30.0% |
| !! | ATTAAGGAGGTTTTGTATCA+TGG | + | chr4.4:85362693-85362712 | MS.gene052744:intron | 30.0% |
| !! | ATTGAGTTGAGTTGGATTAT+AGG | + | chr4.4:85363848-85363867 | MS.gene052744:intron | 30.0% |
| !! | GCCATTTGTTAAGACATTTT+TGG | + | chr4.4:85361717-85361736 | MS.gene052744:CDS | 30.0% |
| !! | TTGAGTTGAGTTGGATTATA+GGG | + | chr4.4:85363849-85363868 | MS.gene052744:intron | 30.0% |
| !!! | ACGAAGCAAAGTTTGTTTTA+TGG | + | chr4.4:85365557-85365576 | MS.gene052744:CDS | 30.0% |
| !!! | CAAGCAATTTTTTCAGGTAA+AGG | - | chr4.4:85365158-85365177 | None:intergenic | 30.0% |
| !!! | GATTAATGTTTTGATTGCCA+AGG | - | chr4.4:85361536-85361555 | None:intergenic | 30.0% |
| !!! | TACTGAAAGATAGTTTTGGA+CGG | - | chr4.4:85362653-85362672 | None:intergenic | 30.0% |
| !!! | TTGTACCAAGCAATTTTTTC+AGG | - | chr4.4:85365164-85365183 | None:intergenic | 30.0% |
| AAACCACCGATATAACTTCA+TGG | + | chr4.4:85364528-85364547 | MS.gene052744:intron | 35.0% | |
| AAATGGACCATGGTTTGAAT+AGG | - | chr4.4:85363547-85363566 | None:intergenic | 35.0% | |
| AACTGATAATTTCCACATGG+AGG | + | chr4.4:85364505-85364524 | MS.gene052744:intron | 35.0% | |
| AATGGACCATGGTTTGAATA+GGG | - | chr4.4:85363546-85363565 | None:intergenic | 35.0% | |
| ACAAGGATTGTGCTTTCTTA+TGG | - | chr4.4:85364133-85364152 | None:intergenic | 35.0% | |
| ACTACACAAATGTACATCAC+TGG | - | chr4.4:85362311-85362330 | None:intergenic | 35.0% | |
| AGGTACGTGAAATATACGAA+AGG | - | chr4.4:85361499-85361518 | None:intergenic | 35.0% | |
| ATATTCAAAGGGTTCTTGGA+GGG | + | chr4.4:85365723-85365742 | MS.gene052744:CDS | 35.0% | |
| ATGAAGAAGTGACACATACA+CGG | + | chr4.4:85363620-85363639 | MS.gene052744:intron | 35.0% | |
| CACAATAACTAAGCTCTCTT+TGG | + | chr4.4:85362494-85362513 | MS.gene052744:intron | 35.0% | |
| CACATTACAGGAAGGATATA+TGG | + | chr4.4:85364965-85364984 | MS.gene052744:intron | 35.0% | |
| CATATTCCATGTGTAACAAG+AGG | - | chr4.4:85362091-85362110 | None:intergenic | 35.0% | |
| CTACCCTCATGGAAAATAAT+TGG | - | chr4.4:85365038-85365057 | None:intergenic | 35.0% | |
| CTATCTTTACTAGCTCGTAT+TGG | + | chr4.4:85363517-85363536 | MS.gene052744:intron | 35.0% | |
| GAAATATACGAAAGGGACTA+AGG | - | chr4.4:85361491-85361510 | None:intergenic | 35.0% | |
| GAGAACAAAAAAATGGACCA+TGG | - | chr4.4:85363557-85363576 | None:intergenic | 35.0% | |
| GAGGCAGTTATGAAAGAATT+TGG | + | chr4.4:85361841-85361860 | MS.gene052744:CDS | 35.0% | |
| GAGTAACAATTTGCCTGATT+TGG | + | chr4.4:85361864-85361883 | MS.gene052744:CDS | 35.0% | |
| GATAAGTATGCTATTCTTGC+AGG | + | chr4.4:85365782-85365801 | MS.gene052744:CDS | 35.0% | |
| GATGGTTACAAAAACAGGAA+GGG | + | chr4.4:85361768-85361787 | MS.gene052744:CDS | 35.0% | |
| GCACTAAACCTCAATAGAAA+TGG | - | chr4.4:85365491-85365510 | None:intergenic | 35.0% | |
| GGTACGTGAAATATACGAAA+GGG | - | chr4.4:85361498-85361517 | None:intergenic | 35.0% | |
| GGTTGGACATGAGAAATTTA+TGG | - | chr4.4:85364024-85364043 | None:intergenic | 35.0% | |
| GTAGAGAACCATTTCTATTG+AGG | + | chr4.4:85365480-85365499 | MS.gene052744:CDS | 35.0% | |
| TATAAGATCAGCTCATGAGT+TGG | + | chr4.4:85362191-85362210 | MS.gene052744:intron | 35.0% | |
| TATATTCAAAGGGTTCTTGG+AGG | + | chr4.4:85365722-85365741 | MS.gene052744:CDS | 35.0% | |
| TCACTATGTTGAGATGTGAT+TGG | - | chr4.4:85363907-85363926 | None:intergenic | 35.0% | |
| TGACTTCATGTCTATTTGCA+AGG | + | chr4.4:85361912-85361931 | MS.gene052744:CDS | 35.0% | |
| TGATGGTTACAAAAACAGGA+AGG | + | chr4.4:85361767-85361786 | MS.gene052744:CDS | 35.0% | |
| TGCTACATTTGGAAATTGGT+GGG | - | chr4.4:85361336-85361355 | None:intergenic | 35.0% | |
| TGTGTGCCATGAAGTTATAT+CGG | - | chr4.4:85364537-85364556 | None:intergenic | 35.0% | |
| TTAATCTTTGTCACATTCGC+GGG | + | chr4.4:85361550-85361569 | MS.gene052744:CDS | 35.0% | |
| TTAGATGGGAAGATAGCATT+TGG | + | chr4.4:85363266-85363285 | MS.gene052744:intron | 35.0% | |
| TTCATGTCTATTTGCAAGGT+TGG | + | chr4.4:85361916-85361935 | MS.gene052744:intron | 35.0% | |
| TTGCACTCTTAACCTTCTTA+TGG | + | chr4.4:85365084-85365103 | MS.gene052744:CDS | 35.0% | |
| TTTATGTGGTACAAGCTGTA+CGG | - | chr4.4:85364084-85364103 | None:intergenic | 35.0% | |
| TTTCTTGAATCAGTTGCCTT+TGG | + | chr4.4:85365655-85365674 | MS.gene052744:CDS | 35.0% | |
| ! | AAGCCCAATTATTTTCCATG+AGG | + | chr4.4:85365031-85365050 | MS.gene052744:CDS | 35.0% |
| ! | AAGGTTAAGAGTGCAAATAG+AGG | - | chr4.4:85365080-85365099 | None:intergenic | 35.0% |
| ! | AGAAGCTTGTTTCTTGGTAA+TGG | - | chr4.4:85365011-85365030 | None:intergenic | 35.0% |
| ! | AGCCCAATTATTTTCCATGA+GGG | + | chr4.4:85365032-85365051 | MS.gene052744:CDS | 35.0% |
| ! | AGGTTAAGAGTGCAAATAGA+GGG | - | chr4.4:85365079-85365098 | None:intergenic | 35.0% |
| ! | ATTGGTTTACTCTGTTGTAC+CGG | - | chr4.4:85363737-85363756 | None:intergenic | 35.0% |
| ! | GAAGCTTGTTTCTTGGTAAT+GGG | - | chr4.4:85365010-85365029 | None:intergenic | 35.0% |
| ! | TTCGTGTATAATTTTTCCGG+TGG | + | chr4.4:85363452-85363471 | MS.gene052744:intron | 35.0% |
| !! | ACTAGTCAATTGAGTTGAGT+TGG | + | chr4.4:85363840-85363859 | MS.gene052744:intron | 35.0% |
| !! | AGAGAGCTTTTAAAAAGGGA+AGG | - | chr4.4:85362780-85362799 | None:intergenic | 35.0% |
| !! | TGGAAAGTGTTCAATTCGTT+CGG | + | chr4.4:85361652-85361671 | MS.gene052744:CDS | 35.0% |
| !! | TGTATGTGTCACTTCTTCAT+AGG | - | chr4.4:85363620-85363639 | None:intergenic | 35.0% |
| !! | TTCAATCAAAAGTATCGTGC+CGG | + | chr4.4:85363715-85363734 | MS.gene052744:intron | 35.0% |
| !!! | AACACCACTTTGACCTTTTT+TGG | - | chr4.4:85365240-85365259 | None:intergenic | 35.0% |
| !!! | AAGATAGTTTTGGACGGTTT+TGG | - | chr4.4:85362647-85362666 | None:intergenic | 35.0% |
| !!! | ACACCACTTTGACCTTTTTT+GGG | - | chr4.4:85365239-85365258 | None:intergenic | 35.0% |
| !!! | CAGGGATTTTTTGTTGAGTA+AGG | + | chr4.4:85364223-85364242 | MS.gene052744:intron | 35.0% |
| !!! | CCATAGAACAGTTTTAGATC+CGG | + | chr4.4:85365274-85365293 | MS.gene052744:CDS | 35.0% |
| !!! | GACATTTTTGGGAGTTGATA+AGG | + | chr4.4:85361729-85361748 | MS.gene052744:CDS | 35.0% |
| !!! | GCCCCTAATTTTTTGATGTT+GGG | + | chr4.4:85363361-85363380 | MS.gene052744:intron | 35.0% |
| AAGGGAAAGAGATAGAGATG+CGG | + | chr4.4:85365397-85365416 | MS.gene052744:CDS | 40.0% | |
| AAGTCTAGGGGAATATCACA+AGG | - | chr4.4:85364150-85364169 | None:intergenic | 40.0% | |
| AATGGGTCACATTTAGTCCT+TGG | - | chr4.4:85364993-85365012 | None:intergenic | 40.0% | |
| AATTGGTGGGAAAAGTGGAA+AGG | - | chr4.4:85361323-85361342 | None:intergenic | 40.0% | |
| ACCTTCTTATGGATGCCAAT+TGG | + | chr4.4:85365095-85365114 | MS.gene052744:CDS | 40.0% | |
| AGATAGATCAAACCAAACCG+TGG | + | chr4.4:85361360-85361379 | MS.gene052744:CDS | 40.0% | |
| AGGAAGGATATATGGTACCA+AGG | + | chr4.4:85364973-85364992 | MS.gene052744:intron | 40.0% | |
| ATAGATGATTTCGAGAGCAG+AGG | - | chr4.4:85362743-85362762 | None:intergenic | 40.0% | |
| ATGGACCATGGTTTGAATAG+GGG | - | chr4.4:85363545-85363564 | None:intergenic | 40.0% | |
| CATGGCACACAAAACAGTTA+AGG | + | chr4.4:85364546-85364565 | MS.gene052744:intron | 40.0% | |
| CTAGATCCTCTTGTTACACA+TGG | + | chr4.4:85362082-85362101 | MS.gene052744:intron | 40.0% | |
| GACAATCCTATCCGTTAACT+CGG | - | chr4.4:85365522-85365541 | None:intergenic | 40.0% | |
| GTGCTACATTTGGAAATTGG+TGG | - | chr4.4:85361337-85361356 | None:intergenic | 40.0% | |
| TAATCTTTGTCACATTCGCG+GGG | + | chr4.4:85361551-85361570 | MS.gene052744:CDS | 40.0% | |
| TAGATGATTTCGAGAGCAGA+GGG | - | chr4.4:85362742-85362761 | None:intergenic | 40.0% | |
| TCCAATTGGCATCCATAAGA+AGG | - | chr4.4:85365099-85365118 | None:intergenic | 40.0% | |
| TTGAACACTTTCCATGTCTC+TGG | - | chr4.4:85361646-85361665 | None:intergenic | 40.0% | |
| TTGGAAATTGGTGGGAAAAG+TGG | - | chr4.4:85361328-85361347 | None:intergenic | 40.0% | |
| TTTGGACTAATCTACCCTCA+TGG | - | chr4.4:85365049-85365068 | None:intergenic | 40.0% | |
| ! | AAGACGTGGAGATTGTTTCT+CGG | + | chr4.4:85361584-85361603 | MS.gene052744:CDS | 40.0% |
| ! | AGGTGACTTAGTGATTTGTC+CGG | + | chr4.4:85365445-85365464 | MS.gene052744:CDS | 40.0% |
| ! | CCGGATCTAAAACTGTTCTA+TGG | - | chr4.4:85365277-85365296 | None:intergenic | 40.0% |
| ! | GGTTAAGAGTGCAAATAGAG+GGG | - | chr4.4:85365078-85365097 | None:intergenic | 40.0% |
| ! | GTGATCTCATAAGTTGGCAT+AGG | - | chr4.4:85365635-85365654 | None:intergenic | 40.0% |
| ! | TGCTCTTTTTGCCGAGTTAA+CGG | + | chr4.4:85365508-85365527 | MS.gene052744:CDS | 40.0% |
| ! | TGTTGGTGAACACAAGAAAG+AGG | + | chr4.4:85361822-85361841 | MS.gene052744:CDS | 40.0% |
| !! | AAGGAGGTTTTGTATCATGG+AGG | + | chr4.4:85362696-85362715 | MS.gene052744:intron | 40.0% |
| !! | AATTTGCCTGATTTGGGACT+GGG | + | chr4.4:85361871-85361890 | MS.gene052744:CDS | 40.0% |
| !! | AGGGGAGAGAGCTTTTAAAA+AGG | - | chr4.4:85362785-85362804 | None:intergenic | 40.0% |
| !! | ATGTGTCACTTCTTCATAGG+TGG | - | chr4.4:85363617-85363636 | None:intergenic | 40.0% |
| !! | GGAAAGTGTTCAATTCGTTC+GGG | + | chr4.4:85361653-85361672 | MS.gene052744:CDS | 40.0% |
| !! | GGCACGATACTTTTGATTGA+AGG | - | chr4.4:85363716-85363735 | None:intergenic | 40.0% |
| !! | GGGGAGAGAGCTTTTAAAAA+GGG | - | chr4.4:85362784-85362803 | None:intergenic | 40.0% |
| !! | GTTTTAGATCCGGTTGTTAC+AGG | + | chr4.4:85365284-85365303 | MS.gene052744:CDS | 40.0% |
| !! | TTTTTGCCGAGTTAACGGAT+AGG | + | chr4.4:85365513-85365532 | MS.gene052744:CDS | 40.0% |
| !!! | CAAATAGAGGGGTTGGTTTT+TGG | - | chr4.4:85365067-85365086 | None:intergenic | 40.0% |
| !!! | GGCCCCTAATTTTTTGATGT+TGG | + | chr4.4:85363360-85363379 | MS.gene052744:intron | 40.0% |
| !!! | TGTTTTGATTGCCAAGGTCT+CGG | - | chr4.4:85361530-85361549 | None:intergenic | 40.0% |
| AAAAGCCGTTGCGCTTTCAA+GGG | + | chr4.4:85365379-85365398 | MS.gene052744:CDS | 45.0% | |
| AAGGAACCAGGAGTTCTTGT+TGG | + | chr4.4:85361805-85361824 | MS.gene052744:CDS | 45.0% | |
| AATGGCTCAACCATCAACCT+TGG | - | chr4.4:85361703-85361722 | None:intergenic | 45.0% | |
| ACAAAAACAGGAAGGGCAAG+TGG | + | chr4.4:85361775-85361794 | MS.gene052744:CDS | 45.0% | |
| CAAAAACAGGAAGGGCAAGT+GGG | + | chr4.4:85361776-85361795 | MS.gene052744:CDS | 45.0% | |
| CCACCCAAAAAAGGTCAAAG+TGG | + | chr4.4:85365233-85365252 | MS.gene052744:CDS | 45.0% | |
| CCACTGCAAGTCAATTCCAA+AGG | - | chr4.4:85365674-85365693 | None:intergenic | 45.0% | |
| CGGGAAACGATACATTGTCA+CGG | + | chr4.4:85361672-85361691 | MS.gene052744:CDS | 45.0% | |
| GCTATTCTTGCAGGAACAGA+TGG | + | chr4.4:85365791-85365810 | MS.gene052744:CDS | 45.0% | |
| GCTTCGTATTAATCGCGACA+GGG | - | chr4.4:85365544-85365563 | None:intergenic | 45.0% | |
| GTGCCATGAAGTTATATCGG+TGG | - | chr4.4:85364534-85364553 | None:intergenic | 45.0% | |
| TAAAAGCCGTTGCGCTTTCA+AGG | + | chr4.4:85365378-85365397 | MS.gene052744:CDS | 45.0% | |
| TCTCTACAAGTCGTTCCTTC+CGG | - | chr4.4:85365467-85365486 | None:intergenic | 45.0% | |
| TGCTTCGTATTAATCGCGAC+AGG | - | chr4.4:85365545-85365564 | None:intergenic | 45.0% | |
| TGGACCATGGTTTGAATAGG+GGG | - | chr4.4:85363544-85363563 | None:intergenic | 45.0% | |
| TGTTCACCAACAAGAACTCC+TGG | - | chr4.4:85361814-85361833 | None:intergenic | 45.0% | |
| ! | AAGAGTGCAAATAGAGGGGT+TGG | - | chr4.4:85365074-85365093 | None:intergenic | 45.0% |
| ! | GACTTAGTGATTTGTCCGGA+AGG | + | chr4.4:85365449-85365468 | MS.gene052744:CDS | 45.0% |
| ! | GGGCTTAGAAGCTTGTTTCT+TGG | - | chr4.4:85365017-85365036 | None:intergenic | 45.0% |
| ! | TCTTTCCCTTGAAAGCGCAA+CGG | - | chr4.4:85365387-85365406 | None:intergenic | 45.0% |
| ! | TTCGAGAGCAGAGGGTTTTA+GGG | - | chr4.4:85362734-85362753 | None:intergenic | 45.0% |
| ! | TTTCGAGAGCAGAGGGTTTT+AGG | - | chr4.4:85362735-85362754 | None:intergenic | 45.0% |
| !! | AAGGGCAAGTGGGTTTGTTA+AGG | + | chr4.4:85361786-85361805 | MS.gene052744:CDS | 45.0% |
| !! | AGTGGGTTTGTTAAGGAACC+AGG | + | chr4.4:85361793-85361812 | MS.gene052744:CDS | 45.0% |
| !! | CAATTTGCCTGATTTGGGAC+TGG | + | chr4.4:85361870-85361889 | MS.gene052744:CDS | 45.0% |
| !! | CCTTTGGAATTGACTTGCAG+TGG | + | chr4.4:85365671-85365690 | MS.gene052744:CDS | 45.0% |
| !! | GAAAGCGCAACGGCTTTTAT+AGG | - | chr4.4:85365377-85365396 | None:intergenic | 45.0% |
| !! | TGGAATTGACTTGCAGTGGA+GGG | + | chr4.4:85365675-85365694 | MS.gene052744:CDS | 45.0% |
| !! | TGGGAGTTGATAAGGTGCTA+GGG | + | chr4.4:85361737-85361756 | MS.gene052744:CDS | 45.0% |
| !! | TTGGAATTGACTTGCAGTGG+AGG | + | chr4.4:85365674-85365693 | MS.gene052744:CDS | 45.0% |
| !! | TTGGGAGTTGATAAGGTGCT+AGG | + | chr4.4:85361736-85361755 | MS.gene052744:CDS | 45.0% |
| !!! | CCACTTTGACCTTTTTTGGG+TGG | - | chr4.4:85365236-85365255 | None:intergenic | 45.0% |
| !!! | CTTTGACCTTTTTTGGGTGG+TGG | - | chr4.4:85365233-85365252 | None:intergenic | 45.0% |
| !!! | TTTTATGGAACATCGGCTCG+CGG | + | chr4.4:85365572-85365591 | MS.gene052744:CDS | 45.0% |
| !! | ATAAAATTTAATTACATTTA+TGG | + | chr4.4:85364283-85364302 | MS.gene052744:intron | 5.0% |
| !!! | CTTTTAAAAAAAAAATATAT+TGG | + | chr4.4:85362285-85362304 | MS.gene052744:intron | 5.0% |
| AAAGACAGATGGAGCAGACC+AGG | - | chr4.4:85363495-85363514 | None:intergenic | 50.0% | |
| AAGACAGATGGAGCAGACCA+GGG | - | chr4.4:85363494-85363513 | None:intergenic | 50.0% | |
| AGTGCGACGAGCATGTAGTA+TGG | - | chr4.4:85361430-85361449 | None:intergenic | 50.0% | |
| ATGCACTTCTCGACACGAGA+AGG | - | chr4.4:85361405-85361424 | None:intergenic | 50.0% | |
| CCAAGGTCTCGGAGACAAAT+AGG | - | chr4.4:85361519-85361538 | None:intergenic | 50.0% | |
| CCTATTTGTCTCCGAGACCT+TGG | + | chr4.4:85361516-85361535 | MS.gene052744:CDS | 50.0% | |
| GAAAAGGGAGGGGAGAACTT+TGG | + | chr4.4:85362528-85362547 | MS.gene052744:intron | 50.0% | |
| GGGGCTAAGGATAAAAGACG+TGG | + | chr4.4:85361570-85361589 | MS.gene052744:CDS | 50.0% | |
| GGTGCTAGGGACTGAATTGA+TGG | + | chr4.4:85361750-85361769 | MS.gene052744:CDS | 50.0% | |
| GTGGTACAAGCTGTACGGAT+TGG | - | chr4.4:85364079-85364098 | None:intergenic | 50.0% | |
| TATCGGTGGTTTCCTCCATG+TGG | - | chr4.4:85364520-85364539 | None:intergenic | 50.0% | |
| TGCACTTCTCGACACGAGAA+GGG | - | chr4.4:85361404-85361423 | None:intergenic | 50.0% | |
| TGGTCCCCCTATTCAAACCA+TGG | + | chr4.4:85363537-85363556 | MS.gene052744:intron | 50.0% | |
| TTGGGAGTCTCGAGGGAAAA+GGG | + | chr4.4:85362513-85362532 | MS.gene052744:intron | 50.0% | |
| TTTCTCGGTCAGTGTTGCCT+AGG | + | chr4.4:85361599-85361618 | MS.gene052744:CDS | 50.0% | |
| TTTGGGAGTCTCGAGGGAAA+AGG | + | chr4.4:85362512-85362531 | MS.gene052744:intron | 50.0% | |
| ! | ACATTGTCACGGCTAGTCCA+AGG | + | chr4.4:85361683-85361702 | MS.gene052744:CDS | 50.0% |
| !! | GAGAAGGGTGCCATCTAAGT+CGG | - | chr4.4:85361389-85361408 | None:intergenic | 50.0% |
| !! | TCGAGAGCAGAGGGTTTTAG+GGG | - | chr4.4:85362733-85362752 | None:intergenic | 50.0% |
| !!! | ACCAGGGGAGCAGTTTTGTT+AGG | - | chr4.4:85363478-85363497 | None:intergenic | 50.0% |
| !!! | GAGCAGTTTTGTTAGGCCAC+CGG | - | chr4.4:85363471-85363490 | None:intergenic | 50.0% |
| !!! | TGACCTTTTTTGGGTGGTGG+TGG | - | chr4.4:85365230-85365249 | None:intergenic | 50.0% |
| ACCGTGGCATCCGACTTAGA+TGG | + | chr4.4:85361376-85361395 | MS.gene052744:CDS | 55.0% | |
| ACGTCCTCGGCATAGAACCT+AGG | - | chr4.4:85361619-85361638 | None:intergenic | 55.0% | |
| AGACAGATGGAGCAGACCAG+GGG | - | chr4.4:85363493-85363512 | None:intergenic | 55.0% | |
| AGGACGTGCATCCAGAGACA+TGG | + | chr4.4:85361632-85361651 | MS.gene052744:CDS | 55.0% | |
| AGGGTTCTTGGAGGGACTCT+TGG | + | chr4.4:85365731-85365750 | MS.gene052744:CDS | 55.0% | |
| AGTCTCGAGGGAAAAGGGAG+GGG | + | chr4.4:85362518-85362537 | MS.gene052744:intron | 55.0% | |
| CCTCCACCACCACCCAAAAA+AGG | + | chr4.4:85365224-85365243 | MS.gene052744:CDS | 55.0% | |
| CTAAGTCGGATGCCACGGTT+TGG | - | chr4.4:85361375-85361394 | None:intergenic | 55.0% | |
| CTGTCTCCCAGTCCCAAATC+AGG | - | chr4.4:85361880-85361899 | None:intergenic | 55.0% | |
| GAGTCTCGAGGGAAAAGGGA+GGG | + | chr4.4:85362517-85362536 | MS.gene052744:intron | 55.0% | |
| GCACGCGCACACGTATACAT+GGG | - | chr4.4:85363197-85363216 | None:intergenic | 55.0% | |
| GCCATCTAAGTCGGATGCCA+CGG | - | chr4.4:85361380-85361399 | None:intergenic | 55.0% | |
| GCCTAACAAAACTGCTCCCC+TGG | + | chr4.4:85363474-85363493 | MS.gene052744:intron | 55.0% | |
| GGCTCGCGGACACAAATTGT+TGG | + | chr4.4:85365586-85365605 | MS.gene052744:CDS | 55.0% | |
| GTTGCCTAGGTTCTATGCCG+AGG | + | chr4.4:85361612-85361631 | MS.gene052744:CDS | 55.0% | |
| TGCACGCGCACACGTATACA+TGG | - | chr4.4:85363198-85363217 | None:intergenic | 55.0% | |
| TGTCTCTGGATGCACGTCCT+CGG | - | chr4.4:85361632-85361651 | None:intergenic | 55.0% | |
| TTGTCACATTCGCGGGGCTA+AGG | + | chr4.4:85361557-85361576 | MS.gene052744:CDS | 55.0% | |
| ! | AGCTCTCTTTGGGAGTCTCG+AGG | + | chr4.4:85362505-85362524 | MS.gene052744:intron | 55.0% |
| ! | CACGGCTAGTCCAAGGTTGA+TGG | + | chr4.4:85361690-85361709 | MS.gene052744:CDS | 55.0% |
| ! | GCTCTCTTTGGGAGTCTCGA+GGG | + | chr4.4:85362506-85362525 | MS.gene052744:intron | 55.0% |
| !!! | AGAGCAGAGGGTTTTAGGGG+GGG | - | chr4.4:85362730-85362749 | None:intergenic | 55.0% |
| !!! | CCTTTTTTGGGTGGTGGTGG+AGG | - | chr4.4:85365227-85365246 | None:intergenic | 55.0% |
| !!! | CGAGAGCAGAGGGTTTTAGG+GGG | - | chr4.4:85362732-85362751 | None:intergenic | 55.0% |
| !!! | GAGAGCAGAGGGTTTTAGGG+GGG | - | chr4.4:85362731-85362750 | None:intergenic | 55.0% |
| ATGCTCGTCGCACTCGAAGC+TGG | + | chr4.4:85361436-85361455 | MS.gene052744:CDS | 60.0% | |
| GGAGTCTCGAGGGAAAAGGG+AGG | + | chr4.4:85362516-85362535 | MS.gene052744:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 85361313 | 85365841 | 85361313 | ID=MS.gene052744 |
| chr4.4 | mRNA | 85361313 | 85365841 | 85361313 | ID=MS.gene052744.t1;Parent=MS.gene052744 |
| chr4.4 | exon | 85361313 | 85361933 | 85361313 | ID=MS.gene052744.t1.exon1;Parent=MS.gene052744.t1 |
| chr4.4 | CDS | 85361313 | 85361933 | 85361313 | ID=cds.MS.gene052744.t1;Parent=MS.gene052744.t1 |
| chr4.4 | exon | 85364975 | 85365841 | 85364975 | ID=MS.gene052744.t1.exon2;Parent=MS.gene052744.t1 |
| chr4.4 | CDS | 85364975 | 85365841 | 85364975 | ID=cds.MS.gene052744.t1;Parent=MS.gene052744.t1 |
| Gene Sequence |
| Protein sequence |
