Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89900.t1 | XP_013455158.1 | 99.4 | 495 | 3 | 0 | 1 | 495 | 1 | 495 | 5.40E-277 | 963 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89900.t1 | O80437 | 78.8 | 490 | 102 | 1 | 7 | 494 | 10 | 499 | 1.3e-226 | 786.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89900.t1 | A0A072UIH6 | 99.4 | 495 | 3 | 0 | 1 | 495 | 1 | 495 | 3.9e-277 | 963.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052744 | MS.gene89900 | 0.851991 | 6.19E-61 | -1.69E-46 |
| MS.gene061071 | MS.gene89900 | 0.83871 | 2.45E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056794 | MS.gene89900 | PPI |
| MS.gene019646 | MS.gene89900 | PPI |
| MS.gene84826 | MS.gene89900 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89900.t1 | MTR_4g415290 | 99.394 | 495 | 3 | 0 | 1 | 495 | 1 | 495 | 0.0 | 1000 |
| MS.gene89900.t1 | MTR_7g067380 | 84.242 | 495 | 76 | 2 | 1 | 494 | 3 | 496 | 0.0 | 854 |
| MS.gene89900.t1 | MTR_8g030620 | 62.118 | 491 | 179 | 5 | 7 | 491 | 10 | 499 | 0.0 | 633 |
| MS.gene89900.t1 | MTR_1g040500 | 57.895 | 494 | 200 | 5 | 7 | 494 | 6 | 497 | 0.0 | 590 |
| MS.gene89900.t1 | MTR_5g080360 | 51.046 | 478 | 224 | 4 | 21 | 492 | 2 | 475 | 3.00e-164 | 474 |
| MS.gene89900.t1 | MTR_5g091660 | 50.713 | 491 | 226 | 7 | 7 | 491 | 51 | 531 | 7.03e-163 | 472 |
| MS.gene89900.t1 | MTR_3g448430 | 46.830 | 489 | 241 | 8 | 8 | 489 | 35 | 511 | 2.72e-150 | 439 |
| MS.gene89900.t1 | MTR_1g086650 | 43.542 | 480 | 254 | 8 | 17 | 489 | 60 | 529 | 2.61e-127 | 381 |
| MS.gene89900.t1 | MTR_5g061520 | 42.387 | 486 | 265 | 8 | 15 | 494 | 10 | 486 | 2.13e-121 | 364 |
| MS.gene89900.t1 | MTR_3g048330 | 52.837 | 282 | 120 | 3 | 220 | 493 | 1 | 277 | 1.16e-99 | 301 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89900.t1 | AT2G38110 | 80.000 | 485 | 95 | 1 | 7 | 489 | 10 | 494 | 0.0 | 791 |
| MS.gene89900.t1 | AT4G00400 | 61.680 | 488 | 181 | 5 | 7 | 491 | 10 | 494 | 0.0 | 605 |
| MS.gene89900.t1 | AT1G01610 | 61.382 | 492 | 183 | 6 | 7 | 494 | 10 | 498 | 0.0 | 598 |
| MS.gene89900.t1 | AT3G11430 | 51.346 | 483 | 213 | 5 | 19 | 489 | 9 | 481 | 7.25e-166 | 478 |
| MS.gene89900.t1 | AT5G06090 | 48.560 | 486 | 222 | 6 | 19 | 489 | 7 | 479 | 1.13e-152 | 445 |
| MS.gene89900.t1 | AT1G06520 | 44.961 | 516 | 248 | 11 | 5 | 490 | 76 | 585 | 6.27e-147 | 433 |
| MS.gene89900.t1 | AT1G02390 | 39.468 | 489 | 276 | 9 | 16 | 490 | 46 | 528 | 1.31e-110 | 338 |
| MS.gene89900.t1 | AT4G01950 | 39.351 | 493 | 269 | 11 | 17 | 492 | 41 | 520 | 7.28e-108 | 331 |
| MS.gene89900.t1 | AT4G01950 | 39.351 | 493 | 269 | 11 | 17 | 492 | 69 | 548 | 1.45e-107 | 331 |
| MS.gene89900.t1 | AT3G11325 | 49.237 | 262 | 100 | 1 | 228 | 489 | 144 | 372 | 9.68e-84 | 264 |
| MS.gene89900.t1 | AT3G11325 | 37.143 | 105 | 66 | 0 | 31 | 135 | 9 | 113 | 2.40e-16 | 81.3 |
| MS.gene89900.t1 | AT3G11325 | 49.237 | 262 | 100 | 1 | 228 | 489 | 141 | 369 | 1.37e-83 | 264 |
| MS.gene89900.t1 | AT3G11325 | 37.143 | 105 | 66 | 0 | 31 | 135 | 6 | 110 | 2.67e-16 | 81.3 |
Find 108 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCCTTCCTTGTTAAAT+TGG | 0.158055 | 4.2:-86155430 | None:intergenic |
| GAGGCAGTTATGAAAGAATT+TGG | 0.160182 | 4.2:+86151593 | MS.gene89900:CDS |
| TTGCACTCTTAACCTTCTTA+TGG | 0.235930 | 4.2:+86154749 | MS.gene89900:CDS |
| GAATCATACTTTCAATCTTA+AGG | 0.293063 | 4.2:+86154782 | MS.gene89900:CDS |
| GAGTAACAATTTGCCTGATT+TGG | 0.303564 | 4.2:+86151616 | MS.gene89900:CDS |
| AATTATATTCAAAGGGTTCT+TGG | 0.305203 | 4.2:+86155384 | MS.gene89900:CDS |
| AGAAGCTTGTTTCTTGGTAA+TGG | 0.311340 | 4.2:-86154673 | None:intergenic |
| GATAAGTATGCTATTCTTGC+AGG | 0.334585 | 4.2:+86155447 | MS.gene89900:CDS |
| GGGCTTAGAAGCTTGTTTCT+TGG | 0.336364 | 4.2:-86154679 | None:intergenic |
| TCTCTACATGTCGTTCCTTC+CGG | 0.339845 | 4.2:-86155129 | None:intergenic |
| TTTCTTGAATCAGTTGCCTT+TGG | 0.341998 | 4.2:+86155320 | MS.gene89900:CDS |
| AGTAACAATTTGCCTGATTT+GGG | 0.342680 | 4.2:+86151617 | MS.gene89900:CDS |
| AATCATACTTTCAATCTTAA+GGG | 0.343266 | 4.2:+86154783 | MS.gene89900:CDS |
| AGGGTTCTTGGAGGGACTCT+TGG | 0.352717 | 4.2:+86155396 | MS.gene89900:CDS |
| GGATTCATGAACACAAAATA+AGG | 0.356896 | 4.2:-86155276 | None:intergenic |
| CCAAGGTCTCGGAGACAAAT+AGG | 0.357156 | 4.2:-86151268 | None:intergenic |
| TTTGTGCTACATTTGGAAAT+TGG | 0.360873 | 4.2:-86151089 | None:intergenic |
| GAAGCTTGTTTCTTGGTAAT+GGG | 0.362820 | 4.2:-86154672 | None:intergenic |
| TGGAAAGTGTTCAATTCGTT+CGG | 0.372012 | 4.2:+86151404 | MS.gene89900:CDS |
| AGGCAGTTATGAAAGAATTT+GGG | 0.373459 | 4.2:+86151594 | MS.gene89900:CDS |
| TCTTGGTAATGGGTCACATT+TGG | 0.374038 | 4.2:-86154662 | None:intergenic |
| TTGAACACTTTCCATGTCTC+TGG | 0.382477 | 4.2:-86151395 | None:intergenic |
| GTTGTTACAGGAGTTGCATT+AGG | 0.394796 | 4.2:+86154961 | MS.gene89900:CDS |
| TAAAAGCCGTTGCGCTTTCA+AGG | 0.395510 | 4.2:+86155043 | MS.gene89900:CDS |
| CTGGATCTAAAACTGTTCTA+TGG | 0.403705 | 4.2:-86154939 | None:intergenic |
| GAGGGCAAGTGGGTTTGTTA+AGG | 0.407100 | 4.2:+86151538 | MS.gene89900:CDS |
| TTGGAAATTGGTGGGAAAAG+TGG | 0.411232 | 4.2:-86151077 | None:intergenic |
| TGGTACAATTATAAATTACT+TGG | 0.415906 | 4.2:+86154841 | MS.gene89900:CDS |
| ACCTTCTTATGGATGCCAAT+TGG | 0.419088 | 4.2:+86154760 | MS.gene89900:CDS |
| GGAAAGTGTTCAATTCGTTC+GGG | 0.425126 | 4.2:+86151405 | MS.gene89900:CDS |
| AGTGCGACGAGCATGTAGTA+TGG | 0.432920 | 4.2:-86151179 | None:intergenic |
| AATGCAACTCCTGTAACAAC+TGG | 0.433295 | 4.2:-86154958 | None:intergenic |
| CACGGCTAGTCCAAGGTTGA+TGG | 0.435779 | 4.2:+86151442 | MS.gene89900:CDS |
| AATGGGTCACATTTGGTCCT+TGG | 0.442068 | 4.2:-86154655 | None:intergenic |
| ATTGAAAGTATGATTCCAAT+TGG | 0.443499 | 4.2:-86154775 | None:intergenic |
| CTGTCTCCCAGTCCCAAATC+AGG | 0.448486 | 4.2:-86151629 | None:intergenic |
| CAATTTGCCTGATTTGGGAC+TGG | 0.449611 | 4.2:+86151622 | MS.gene89900:CDS |
| ACACGAGAAGGGTGCCATCT+AGG | 0.454550 | 4.2:-86151142 | None:intergenic |
| ATGCTCGTCGCACTCGAAGC+TGG | 0.455449 | 4.2:+86151188 | MS.gene89900:CDS |
| AAGAGTGCAAATAGAGGGGT+TGG | 0.455638 | 4.2:-86154736 | None:intergenic |
| GTAGAGAACCGTTTCTATTG+AGG | 0.458187 | 4.2:+86155145 | MS.gene89900:CDS |
| TCCAATTGGCATCCATAAGA+AGG | 0.458669 | 4.2:-86154761 | None:intergenic |
| GGTGCTAGGGACTGAATTGA+TGG | 0.464183 | 4.2:+86151502 | MS.gene89900:CDS |
| AATTTGCCTGATTTGGGACT+GGG | 0.468437 | 4.2:+86151623 | MS.gene89900:CDS |
| AAGGAACCAGGAGTTCTTGT+TGG | 0.472018 | 4.2:+86151557 | MS.gene89900:CDS |
| TGCTTCGTATTAATCGCGAC+AGG | 0.478003 | 4.2:-86155207 | None:intergenic |
| TTTCTCGGTCAGTGTTGCCT+AGG | 0.478351 | 4.2:+86151351 | MS.gene89900:CDS |
| CTAGGTCGGATGCCACGGTT+TGG | 0.479842 | 4.2:-86151124 | None:intergenic |
| TTGTCACATTCGCGGGGCTA+AGG | 0.481220 | 4.2:+86151309 | MS.gene89900:CDS |
| TTGGGAGTAGATAAGGTGCT+AGG | 0.486623 | 4.2:+86151488 | MS.gene89900:CDS |
| GAAATATACGAAAGGGACTA+AGG | 0.490330 | 4.2:-86151240 | None:intergenic |
| CCTTTGGAATTGACTTGCAG+TGG | 0.493619 | 4.2:+86155336 | MS.gene89900:CDS |
| TTAATCTTTGTCACATTCGC+GGG | 0.496943 | 4.2:+86151302 | MS.gene89900:CDS |
| ATAAAGAAATTGCTTGAAGA+AGG | 0.497977 | 4.2:+86155090 | MS.gene89900:CDS |
| GGCTCGCGGACACAAATTGT+TGG | 0.498712 | 4.2:+86155251 | MS.gene89900:CDS |
| CACATTACAGGAAGGATACA+TGG | 0.503595 | 4.2:+86154630 | MS.gene89900:intron |
| AGTTGCAAATTATATTCAAA+GGG | 0.504087 | 4.2:+86155377 | MS.gene89900:CDS |
| AAGTTGCAAATTATATTCAA+AGG | 0.504845 | 4.2:+86155376 | MS.gene89900:CDS |
| TGTTCACCAACAAGAACTCC+TGG | 0.509031 | 4.2:-86151563 | None:intergenic |
| AAGAAAGTGATCTCATAAGT+TGG | 0.509395 | 4.2:-86155303 | None:intergenic |
| GCCATCTAGGTCGGATGCCA+CGG | 0.509743 | 4.2:-86151129 | None:intergenic |
| GCTATTCTTGCAGGAACAGA+TGG | 0.510039 | 4.2:+86155456 | MS.gene89900:CDS |
| GGAATAAGAGTAATTAGAAA+AGG | 0.510705 | 4.2:+86154862 | MS.gene89900:CDS |
| CCTATTTGTCTCCGAGACCT+TGG | 0.512360 | 4.2:+86151268 | MS.gene89900:CDS |
| AGGTTAAGAGTGCAAATAGA+GGG | 0.520148 | 4.2:-86154741 | None:intergenic |
| AGGTGACTTAGTGATTTGTC+CGG | 0.526292 | 4.2:+86155110 | MS.gene89900:CDS |
| AAGACGTGGAGATTGTTTCT+CGG | 0.526609 | 4.2:+86151336 | MS.gene89900:CDS |
| AAGGTTAAGAGTGCAAATAG+AGG | 0.530421 | 4.2:-86154742 | None:intergenic |
| TGACTTCATGTCTATTTGCA+AGG | 0.539001 | 4.2:+86151664 | MS.gene89900:CDS |
| GCACTAAACCTCAATAGAAA+CGG | 0.544972 | 4.2:-86155153 | None:intergenic |
| ATATTCAAAGGGTTCTTGGA+GGG | 0.546066 | 4.2:+86155388 | MS.gene89900:CDS |
| ATGCACTTCGCGACACGAGA+AGG | 0.548044 | 4.2:-86151154 | None:intergenic |
| TGTTGGTGAACACAAGAAAG+AGG | 0.548662 | 4.2:+86151574 | MS.gene89900:CDS |
| TGGGAGTAGATAAGGTGCTA+GGG | 0.549005 | 4.2:+86151489 | MS.gene89900:CDS |
| TGCTACATTTGGAAATTGGT+GGG | 0.549882 | 4.2:-86151085 | None:intergenic |
| AGTGGGTTTGTTAAGGAACC+AGG | 0.551989 | 4.2:+86151545 | MS.gene89900:CDS |
| AATGGCTCAACCATCAACCT+TGG | 0.553342 | 4.2:-86151452 | None:intergenic |
| TGTCTCTGGATGCACGTCCT+CGG | 0.553696 | 4.2:-86151381 | None:intergenic |
| GGTACGTGAAATATACGAAA+GGG | 0.556590 | 4.2:-86151247 | None:intergenic |
| ATGTACCAATTTAACAAGGA+AGG | 0.557734 | 4.2:+86155425 | MS.gene89900:CDS |
| TATATTCAAAGGGTTCTTGG+AGG | 0.558009 | 4.2:+86155387 | MS.gene89900:CDS |
| AAAAGCCGTTGCGCTTTCAA+GGG | 0.561930 | 4.2:+86155044 | MS.gene89900:CDS |
| TGGAATTGACTTGCAGTGGA+GGG | 0.564415 | 4.2:+86155340 | MS.gene89900:CDS |
| TTGGAATTGACTTGCAGTGG+AGG | 0.574024 | 4.2:+86155339 | MS.gene89900:CDS |
| ATTAATCTTTGTCACATTCG+CGG | 0.578687 | 4.2:+86151301 | MS.gene89900:CDS |
| GTGCTACATTTGGAAATTGG+TGG | 0.579404 | 4.2:-86151086 | None:intergenic |
| GTGATCTCATAAGTTGGCAT+AGG | 0.582217 | 4.2:-86155297 | None:intergenic |
| ACCGTGGCATCCGACCTAGA+TGG | 0.591495 | 4.2:+86151128 | MS.gene89900:CDS |
| GGTTAAGAGTGCAAATAGAG+GGG | 0.592460 | 4.2:-86154740 | None:intergenic |
| TGCACTTCGCGACACGAGAA+GGG | 0.596300 | 4.2:-86151153 | None:intergenic |
| AGGACGTGCATCCAGAGACA+TGG | 0.604083 | 4.2:+86151384 | MS.gene89900:CDS |
| TCTTTCCCTTGAAAGCGCAA+CGG | 0.605263 | 4.2:-86155049 | None:intergenic |
| AGGTACGTGAAATATACGAA+AGG | 0.608258 | 4.2:-86151248 | None:intergenic |
| GAGAAGGGTGCCATCTAGGT+CGG | 0.614645 | 4.2:-86151138 | None:intergenic |
| ACATTGTCACGGCTAGTCCA+AGG | 0.617998 | 4.2:+86151435 | MS.gene89900:CDS |
| GTTGCCTAGGTTCTATGCCG+AGG | 0.628644 | 4.2:+86151364 | MS.gene89900:CDS |
| GCTTCGTATTAATCGCGACA+GGG | 0.633339 | 4.2:-86155206 | None:intergenic |
| CCACTGCAAGTCAATTCCAA+AGG | 0.642771 | 4.2:-86155336 | None:intergenic |
| GACTTAGTGATTTGTCCGGA+AGG | 0.655073 | 4.2:+86155114 | MS.gene89900:CDS |
| ACGTCCTCGGCATAGAACCT+AGG | 0.656526 | 4.2:-86151368 | None:intergenic |
| AATTGGTGGGAAAAGTGGAA+AGG | 0.657733 | 4.2:-86151072 | None:intergenic |
| TTGAATGTACCAATTTAACA+AGG | 0.660163 | 4.2:+86155421 | MS.gene89900:CDS |
| TAATCTTTGTCACATTCGCG+GGG | 0.673980 | 4.2:+86151303 | MS.gene89900:CDS |
| AGGAAGGATACATGGTACCA+AGG | 0.684832 | 4.2:+86154638 | MS.gene89900:intron |
| CGGGAAACGATACATTGTCA+CGG | 0.691995 | 4.2:+86151424 | MS.gene89900:CDS |
| AGATAGATCAAACCAAACCG+TGG | 0.705896 | 4.2:+86151112 | MS.gene89900:CDS |
| GGGGCTAAGGATAAAAGACG+TGG | 0.717767 | 4.2:+86151322 | MS.gene89900:CDS |
| AAGGGAAAGAGATAGAGATG+CGG | 0.731861 | 4.2:+86155062 | MS.gene89900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATACATAGTT+AGG | - | chr4.2:86154165-86154184 | None:intergenic | 10.0% |
| !! | ATAACAAAAATATATATGAA+TGG | - | chr4.2:86152150-86152169 | None:intergenic | 10.0% |
| !! | TGATGATTATTAAATTATAT+CGG | + | chr4.2:86153111-86153130 | MS.gene89900:intron | 10.0% |
| !!! | ATGAATGTTTTATTAATTAA+TGG | + | chr4.2:86151891-86151910 | MS.gene89900:intron | 10.0% |
| !! | AACTAACACATTATATAATT+TGG | - | chr4.2:86151766-86151785 | None:intergenic | 15.0% |
| !! | CAAAAACATGATAAATAAAT+AGG | - | chr4.2:86152124-86152143 | None:intergenic | 15.0% |
| !! | TAATAGACTATAATTTAGAA+TGG | + | chr4.2:86151969-86151988 | MS.gene89900:intron | 15.0% |
| !! | TATAAAACATCAATAAAGTT+AGG | - | chr4.2:86153363-86153382 | None:intergenic | 15.0% |
| !!! | TTATATAATGTGTTAGTTTA+TGG | + | chr4.2:86151768-86151787 | MS.gene89900:intron | 15.0% |
| !!! | TTTTCATACATTTTTTTATG+TGG | - | chr4.2:86153844-86153863 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTCTGTATTAT+TGG | - | chr4.2:86153524-86153543 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCAATCTAACTT+AGG | + | chr4.2:86152660-86152679 | MS.gene89900:intron | 15.0% |
| !! | AAATAAAATTTAGGAAGTCT+AGG | - | chr4.2:86153911-86153930 | None:intergenic | 20.0% |
| !! | AACAAGGACAAATAAAATTT+AGG | - | chr4.2:86153920-86153939 | None:intergenic | 20.0% |
| !! | AAGTTGCAAATTATATTCAA+AGG | + | chr4.2:86155376-86155395 | MS.gene89900:CDS | 20.0% |
| !! | AATAAAATTTAGGAAGTCTA+GGG | - | chr4.2:86153910-86153929 | None:intergenic | 20.0% |
| !! | AATCATACTTTCAATCTTAA+GGG | + | chr4.2:86154783-86154802 | MS.gene89900:CDS | 20.0% |
| !! | AGAAAAGAAAAAAAAGAACA+AGG | - | chr4.2:86153936-86153955 | None:intergenic | 20.0% |
| !! | AGAAATAATTAGACTATGTT+TGG | - | chr4.2:86154610-86154629 | None:intergenic | 20.0% |
| !! | AGTTGCAAATTATATTCAAA+GGG | + | chr4.2:86155377-86155396 | MS.gene89900:CDS | 20.0% |
| !! | CAATTATAAAATCAGTTCTA+GGG | + | chr4.2:86153563-86153582 | MS.gene89900:intron | 20.0% |
| !! | GTAAATTGAGAAATCAAAAT+AGG | - | chr4.2:86152839-86152858 | None:intergenic | 20.0% |
| !! | TGACAACTAAAAAATTATAC+TGG | - | chr4.2:86152451-86152470 | None:intergenic | 20.0% |
| !! | TGGTACAATTATAAATTACT+TGG | + | chr4.2:86154841-86154860 | MS.gene89900:CDS | 20.0% |
| !! | TTATGATAACTTTATGAGTT+TGG | - | chr4.2:86154133-86154152 | None:intergenic | 20.0% |
| !!! | AAGTTTTAGGTGAAAAAAAT+AGG | - | chr4.2:86152721-86152740 | None:intergenic | 20.0% |
| !!! | ACTGATAAAATTTTGAGAAA+AGG | + | chr4.2:86153446-86153465 | MS.gene89900:intron | 20.0% |
| !!! | CTGTATTTTATCTTTTGTTA+TGG | + | chr4.2:86154546-86154565 | MS.gene89900:intron | 20.0% |
| !!! | TAACTTTAGAGAACAAAAAA+TGG | - | chr4.2:86153336-86153355 | None:intergenic | 20.0% |
| !!! | TCTTTTTCAAATTTCTGTTT+TGG | + | chr4.2:86153019-86153038 | MS.gene89900:intron | 20.0% |
| !!! | TTTTAGTTGTCACAAATTAA+GGG | + | chr4.2:86152459-86152478 | MS.gene89900:intron | 20.0% |
| !!! | TTTTATAGGCGAAATTATTT+CGG | - | chr4.2:86155028-86155047 | None:intergenic | 20.0% |
| !!! | TTTTTAGTTGTCACAAATTA+AGG | + | chr4.2:86152458-86152477 | MS.gene89900:intron | 20.0% |
| !!! | TTTTTGTAGATGTGATATTA+GGG | + | chr4.2:86152783-86152802 | MS.gene89900:intron | 20.0% |
| ! | AAATTATCAGTTCATAGACT+AGG | - | chr4.2:86154207-86154226 | None:intergenic | 25.0% |
| ! | AATAAATAGGCAGATAGATA+TGG | - | chr4.2:86152111-86152130 | None:intergenic | 25.0% |
| ! | AATTATATTCAAAGGGTTCT+TGG | + | chr4.2:86155384-86155403 | MS.gene89900:CDS | 25.0% |
| ! | AATTGGAAGATATCCAATTA+GGG | - | chr4.2:86153548-86153567 | None:intergenic | 25.0% |
| ! | AGACATAAATTTAAGGAAAG+AGG | - | chr4.2:86153201-86153220 | None:intergenic | 25.0% |
| ! | ATAAAATTTAGGAAGTCTAG+GGG | - | chr4.2:86153909-86153928 | None:intergenic | 25.0% |
| ! | ATAAAGAAATTGCTTGAAGA+AGG | + | chr4.2:86155090-86155109 | MS.gene89900:CDS | 25.0% |
| ! | ATGTGATATTAGGGATTAAA+AGG | + | chr4.2:86152792-86152811 | MS.gene89900:intron | 25.0% |
| ! | ATTAAATTGACTACAGAAAC+TGG | - | chr4.2:86152071-86152090 | None:intergenic | 25.0% |
| ! | ATTGAGAAATCAAAATAGGA+AGG | - | chr4.2:86152835-86152854 | None:intergenic | 25.0% |
| ! | CAACTAAAAAATTATACTGG+AGG | - | chr4.2:86152448-86152467 | None:intergenic | 25.0% |
| ! | CAGATAGATATGGATATATT+AGG | - | chr4.2:86152101-86152120 | None:intergenic | 25.0% |
| ! | CATATTCATAAGTTGTATTC+AGG | + | chr4.2:86154471-86154490 | MS.gene89900:intron | 25.0% |
| ! | CCAATTATAAAATCAGTTCT+AGG | + | chr4.2:86153562-86153581 | MS.gene89900:intron | 25.0% |
| ! | CGAAAACAGACATAAATTTA+AGG | - | chr4.2:86153208-86153227 | None:intergenic | 25.0% |
| ! | GAAGAAAAAAAATCCCTAAT+TGG | + | chr4.2:86153532-86153551 | MS.gene89900:intron | 25.0% |
| ! | GAATCATACTTTCAATCTTA+AGG | + | chr4.2:86154782-86154801 | MS.gene89900:CDS | 25.0% |
| ! | GGAATAAGAGTAATTAGAAA+AGG | + | chr4.2:86154862-86154881 | MS.gene89900:CDS | 25.0% |
| ! | GGATATAGAGATGTTAAAAT+GGG | - | chr4.2:86153644-86153663 | None:intergenic | 25.0% |
| ! | TAAAGATAGAAAAAGACAGA+TGG | - | chr4.2:86153278-86153297 | None:intergenic | 25.0% |
| ! | TAATTGGAAGATATCCAATT+AGG | - | chr4.2:86153549-86153568 | None:intergenic | 25.0% |
| ! | TACCCTCATGAAAAATAATT+GGG | - | chr4.2:86154702-86154721 | None:intergenic | 25.0% |
| ! | TGGATATAGAGATGTTAAAA+TGG | - | chr4.2:86153645-86153664 | None:intergenic | 25.0% |
| ! | TGTGATATTAGGGATTAAAA+GGG | + | chr4.2:86152793-86152812 | MS.gene89900:intron | 25.0% |
| ! | TTGAATGTACCAATTTAACA+AGG | + | chr4.2:86155421-86155440 | MS.gene89900:CDS | 25.0% |
| ! | TTTAGTTGTCACAAATTAAG+GGG | + | chr4.2:86152460-86152479 | MS.gene89900:intron | 25.0% |
| !! | AATTATACTGGAGGATATTT+TGG | - | chr4.2:86152439-86152458 | None:intergenic | 25.0% |
| !! | AATTGATGGTTACAAAAACA+GGG | + | chr4.2:86151516-86151535 | MS.gene89900:CDS | 25.0% |
| !! | AGACTATAATTTAGAATGGA+TGG | + | chr4.2:86151973-86151992 | MS.gene89900:intron | 25.0% |
| !! | AGTCATATTTCACAAGTTTT+AGG | - | chr4.2:86152734-86152753 | None:intergenic | 25.0% |
| !! | ATTGAAAGTATGATTCCAAT+TGG | - | chr4.2:86154778-86154797 | None:intergenic | 25.0% |
| !! | ATTTGTGAATGTCGATTAAA+AGG | - | chr4.2:86151822-86151841 | None:intergenic | 25.0% |
| !! | CATTTTATCATACTGTCATA+TGG | - | chr4.2:86154079-86154098 | None:intergenic | 25.0% |
| !! | CTAATTATTTCTCACATTAC+AGG | + | chr4.2:86154618-86154637 | MS.gene89900:intron | 25.0% |
| !! | GTTTTCGTGTATAATTTTTC+CGG | + | chr4.2:86153221-86153240 | MS.gene89900:intron | 25.0% |
| !! | GTTTTTGTAGATGTGATATT+AGG | + | chr4.2:86152782-86152801 | MS.gene89900:intron | 25.0% |
| !!! | AAGCAATTTTTTCAGGTAAA+GGG | - | chr4.2:86154822-86154841 | None:intergenic | 25.0% |
| !!! | AAGTTTGTTTTATGGAACAT+CGG | + | chr4.2:86155230-86155249 | MS.gene89900:CDS | 25.0% |
| !!! | AATTGACTAGTATTTTAGCT+TGG | - | chr4.2:86153595-86153614 | None:intergenic | 25.0% |
| !!! | ATTGACTAGTATTTTAGCTT+GGG | - | chr4.2:86153594-86153613 | None:intergenic | 25.0% |
| !!! | CCATTTGTTAAGACATTTTT+GGG | + | chr4.2:86151470-86151489 | MS.gene89900:CDS | 25.0% |
| !!! | CCTAGAACTGATTTTATAAT+TGG | - | chr4.2:86153565-86153584 | None:intergenic | 25.0% |
| !!! | GTGAAAGTATTTTGAACAAA+TGG | + | chr4.2:86154435-86154454 | MS.gene89900:intron | 25.0% |
| !!! | TTCAAATTTCTGTTTTGGAT+GGG | + | chr4.2:86153024-86153043 | MS.gene89900:intron | 25.0% |
| !!! | TTTCAAATTTCTGTTTTGGA+TGG | + | chr4.2:86153023-86153042 | MS.gene89900:intron | 25.0% |
| AAGAAAGTGATCTCATAAGT+TGG | - | chr4.2:86155306-86155325 | None:intergenic | 30.0% | |
| ACAATAACTAAGCTCTCTTT+GGG | + | chr4.2:86152276-86152295 | MS.gene89900:intron | 30.0% | |
| ACCCAACATCAAAAAATTAG+GGG | - | chr4.2:86153137-86153156 | None:intergenic | 30.0% | |
| AGATCTACGAAGAAAGATTA+AGG | + | chr4.2:86155486-86155505 | MS.gene89900:CDS | 30.0% | |
| AGGCAGTTATGAAAGAATTT+GGG | + | chr4.2:86151594-86151613 | MS.gene89900:CDS | 30.0% | |
| AGTAACAATTTGCCTGATTT+GGG | + | chr4.2:86151617-86151636 | MS.gene89900:CDS | 30.0% | |
| ATGAACTGATAATTTCCACA+TGG | + | chr4.2:86154212-86154231 | MS.gene89900:intron | 30.0% | |
| ATGTACCAATTTAACAAGGA+AGG | + | chr4.2:86155425-86155444 | MS.gene89900:CDS | 30.0% | |
| ATTAATCTTTGTCACATTCG+CGG | + | chr4.2:86151301-86151320 | MS.gene89900:CDS | 30.0% | |
| CAATAAACACGATACTGATA+TGG | + | chr4.2:86153413-86153432 | MS.gene89900:intron | 30.0% | |
| CACCCAACATCAAAAAATTA+GGG | - | chr4.2:86153138-86153157 | None:intergenic | 30.0% | |
| CATAAATTTAAGGAAAGAGG+AGG | - | chr4.2:86153198-86153217 | None:intergenic | 30.0% | |
| CCCAAAAATGTCTTAACAAA+TGG | - | chr4.2:86151473-86151492 | None:intergenic | 30.0% | |
| CTACCCTCATGAAAAATAAT+TGG | - | chr4.2:86154703-86154722 | None:intergenic | 30.0% | |
| CTTATCCTTCCTTGTTAAAT+TGG | - | chr4.2:86155433-86155452 | None:intergenic | 30.0% | |
| CTTTACCTGAAAAAATTGCT+TGG | + | chr4.2:86154821-86154840 | MS.gene89900:CDS | 30.0% | |
| GGATTCATGAACACAAAATA+AGG | - | chr4.2:86155279-86155298 | None:intergenic | 30.0% | |
| GTCTGTTTGAGAGTTTAAAA+GGG | - | chr4.2:86152585-86152604 | None:intergenic | 30.0% | |
| TCACCCAACATCAAAAAATT+AGG | - | chr4.2:86153139-86153158 | None:intergenic | 30.0% | |
| TCTGTTTGAGAGTTTAAAAG+GGG | - | chr4.2:86152584-86152603 | None:intergenic | 30.0% | |
| TTAGTTGTCACAAATTAAGG+GGG | + | chr4.2:86152461-86152480 | MS.gene89900:intron | 30.0% | |
| TTCTAGATATCACAGATTCA+GGG | + | chr4.2:86153952-86153971 | MS.gene89900:intron | 30.0% | |
| TTTCTAGATATCACAGATTC+AGG | + | chr4.2:86153951-86153970 | MS.gene89900:intron | 30.0% | |
| TTTGTGCTACATTTGGAAAT+TGG | - | chr4.2:86151092-86151111 | None:intergenic | 30.0% | |
| ! | AAGTTGTATTCAGGCTTTTT+AGG | + | chr4.2:86154480-86154499 | MS.gene89900:intron | 30.0% |
| ! | AGAAAACCTTAACTGTTTTG+TGG | - | chr4.2:86154265-86154284 | None:intergenic | 30.0% |
| ! | CAAAACAGTTAAGGTTTTCT+AGG | + | chr4.2:86154265-86154284 | MS.gene89900:intron | 30.0% |
| ! | GAAAACCTTAACTGTTTTGT+GGG | - | chr4.2:86154264-86154283 | None:intergenic | 30.0% |
| ! | GAATTGATGGTTACAAAAAC+AGG | + | chr4.2:86151515-86151534 | MS.gene89900:CDS | 30.0% |
| ! | TCTATCTTTTGTGCTACATT+TGG | - | chr4.2:86151099-86151118 | None:intergenic | 30.0% |
| ! | TGCTCTTTTTGCAGAATTAA+CGG | + | chr4.2:86155173-86155192 | MS.gene89900:CDS | 30.0% |
| ! | TTATTTCTCACATTACAGGA+AGG | + | chr4.2:86154622-86154641 | MS.gene89900:intron | 30.0% |
| !! | AAGCCCAATTATTTTTCATG+AGG | + | chr4.2:86154696-86154715 | MS.gene89900:CDS | 30.0% |
| !! | AGCCCAATTATTTTTCATGA+GGG | + | chr4.2:86154697-86154716 | MS.gene89900:CDS | 30.0% |
| !! | ATTAAGGGGGTTTTATATCT+TGG | + | chr4.2:86152474-86152493 | MS.gene89900:intron | 30.0% |
| !! | ATTGAGTTGAGTTGGATTAT+AGG | + | chr4.2:86153612-86153631 | MS.gene89900:intron | 30.0% |
| !! | GAAAGAGTACTACTCATAAT+AGG | - | chr4.2:86153803-86153822 | None:intergenic | 30.0% |
| !! | GCCATTTGTTAAGACATTTT+TGG | + | chr4.2:86151469-86151488 | MS.gene89900:CDS | 30.0% |
| !! | TTGAGTTGAGTTGGATTATA+GGG | + | chr4.2:86153613-86153632 | MS.gene89900:intron | 30.0% |
| !! | TTTTTGCAGAATTAACGGAT+AGG | + | chr4.2:86155178-86155197 | MS.gene89900:CDS | 30.0% |
| !!! | ACGAAGCAAAGTTTGTTTTA+TGG | + | chr4.2:86155222-86155241 | MS.gene89900:CDS | 30.0% |
| !!! | CAAGCAATTTTTTCAGGTAA+AGG | - | chr4.2:86154823-86154842 | None:intergenic | 30.0% |
| !!! | GATTAATGTTTTGATTGCCA+AGG | - | chr4.2:86151288-86151307 | None:intergenic | 30.0% |
| !!! | TGACTTTTCTGAAACAATTC+AGG | + | chr4.2:86152749-86152768 | MS.gene89900:intron | 30.0% |
| !!! | TTGTACCAAGCAATTTTTTC+AGG | - | chr4.2:86154829-86154848 | None:intergenic | 30.0% |
| AAACCACCGATATAACTTCA+TGG | + | chr4.2:86154238-86154257 | MS.gene89900:intron | 35.0% | |
| AAATGGACCATGGTTTGAAT+TGG | - | chr4.2:86153319-86153338 | None:intergenic | 35.0% | |
| AACTGATAATTTCCACATGG+AGG | + | chr4.2:86154215-86154234 | MS.gene89900:intron | 35.0% | |
| AATGGACCATGGTTTGAATT+GGG | - | chr4.2:86153318-86153337 | None:intergenic | 35.0% | |
| ACAAGGATTGTGCTTTCTTA+TGG | - | chr4.2:86153880-86153899 | None:intergenic | 35.0% | |
| AGAGAACAAAAAATGGACCA+TGG | - | chr4.2:86153329-86153348 | None:intergenic | 35.0% | |
| AGGTACGTGAAATATACGAA+AGG | - | chr4.2:86151251-86151270 | None:intergenic | 35.0% | |
| ATATTCAAAGGGTTCTTGGA+GGG | + | chr4.2:86155388-86155407 | MS.gene89900:CDS | 35.0% | |
| CAAGAAAAGGAAGGATGAAA+TGG | - | chr4.2:86152551-86152570 | None:intergenic | 35.0% | |
| CACAATAACTAAGCTCTCTT+TGG | + | chr4.2:86152275-86152294 | MS.gene89900:intron | 35.0% | |
| CTATCTTTACTAGCTCGTAT+TGG | + | chr4.2:86153289-86153308 | MS.gene89900:intron | 35.0% | |
| GAAATATACGAAAGGGACTA+AGG | - | chr4.2:86151243-86151262 | None:intergenic | 35.0% | |
| GACTCTAGTATGAACACTTA+AGG | - | chr4.2:86152607-86152626 | None:intergenic | 35.0% | |
| GAGGCAGTTATGAAAGAATT+TGG | + | chr4.2:86151593-86151612 | MS.gene89900:CDS | 35.0% | |
| GAGTAACAATTTGCCTGATT+TGG | + | chr4.2:86151616-86151635 | MS.gene89900:CDS | 35.0% | |
| GAGTACTACTCATAATAGGT+TGG | - | chr4.2:86153799-86153818 | None:intergenic | 35.0% | |
| GATAAGTATGCTATTCTTGC+AGG | + | chr4.2:86155447-86155466 | MS.gene89900:CDS | 35.0% | |
| GCACTAAACCTCAATAGAAA+CGG | - | chr4.2:86155156-86155175 | None:intergenic | 35.0% | |
| GCGCACATACACATATATAT+GGG | - | chr4.2:86152964-86152983 | None:intergenic | 35.0% | |
| GGTACGTGAAATATACGAAA+GGG | - | chr4.2:86151250-86151269 | None:intergenic | 35.0% | |
| GGTCTGTTTGAGAGTTTAAA+AGG | - | chr4.2:86152586-86152605 | None:intergenic | 35.0% | |
| GGTTGGACATGAGAAATTTA+TGG | - | chr4.2:86153782-86153801 | None:intergenic | 35.0% | |
| TATATTCAAAGGGTTCTTGG+AGG | + | chr4.2:86155387-86155406 | MS.gene89900:CDS | 35.0% | |
| TCACTATGTTGAGATGTGAT+TGG | - | chr4.2:86153665-86153684 | None:intergenic | 35.0% | |
| TGACTTCATGTCTATTTGCA+AGG | + | chr4.2:86151664-86151683 | MS.gene89900:CDS | 35.0% | |
| TGCGCACATACACATATATA+TGG | - | chr4.2:86152965-86152984 | None:intergenic | 35.0% | |
| TGCTACATTTGGAAATTGGT+GGG | - | chr4.2:86151088-86151107 | None:intergenic | 35.0% | |
| TTAATCTTTGTCACATTCGC+GGG | + | chr4.2:86151302-86151321 | MS.gene89900:CDS | 35.0% | |
| TTGCACTCTTAACCTTCTTA+TGG | + | chr4.2:86154749-86154768 | MS.gene89900:CDS | 35.0% | |
| TTTATGTGGTACAAGCTGTA+CGG | - | chr4.2:86153830-86153849 | None:intergenic | 35.0% | |
| TTTCTTGAATCAGTTGCCTT+TGG | + | chr4.2:86155320-86155339 | MS.gene89900:CDS | 35.0% | |
| ! | AAGGTTAAGAGTGCAAATAG+AGG | - | chr4.2:86154745-86154764 | None:intergenic | 35.0% |
| ! | AGAAGCTTGTTTCTTGGTAA+TGG | - | chr4.2:86154676-86154695 | None:intergenic | 35.0% |
| ! | AGGTTAAGAGTGCAAATAGA+GGG | - | chr4.2:86154744-86154763 | None:intergenic | 35.0% |
| ! | ATTGGTTTACTCTGTTGTAC+TGG | - | chr4.2:86153506-86153525 | None:intergenic | 35.0% |
| ! | CTGGATCTAAAACTGTTCTA+TGG | - | chr4.2:86154942-86154961 | None:intergenic | 35.0% |
| ! | GAAGCTTGTTTCTTGGTAAT+GGG | - | chr4.2:86154675-86154694 | None:intergenic | 35.0% |
| ! | TTCGTGTATAATTTTTCCGG+TGG | + | chr4.2:86153224-86153243 | MS.gene89900:intron | 35.0% |
| !! | ACTAGTCAATTGAGTTGAGT+TGG | + | chr4.2:86153604-86153623 | MS.gene89900:intron | 35.0% |
| !! | ATACTGGAGGATATTTTGGA+TGG | - | chr4.2:86152435-86152454 | None:intergenic | 35.0% |
| !! | GACATTTTTGGGAGTAGATA+AGG | + | chr4.2:86151481-86151500 | MS.gene89900:CDS | 35.0% |
| !! | GAGGATATTTTGGATGGTTT+GGG | - | chr4.2:86152429-86152448 | None:intergenic | 35.0% |
| !! | GTTTTAGATCCAGTTGTTAC+AGG | + | chr4.2:86154949-86154968 | MS.gene89900:CDS | 35.0% |
| !! | TGGAAAGTGTTCAATTCGTT+CGG | + | chr4.2:86151404-86151423 | MS.gene89900:CDS | 35.0% |
| !!! | AACACCACTTTGACCTTTTT+TGG | - | chr4.2:86154905-86154924 | None:intergenic | 35.0% |
| !!! | ACACCACTTTGACCTTTTTT+GGG | - | chr4.2:86154904-86154923 | None:intergenic | 35.0% |
| !!! | GCCCCTAATTTTTTGATGTT+GGG | + | chr4.2:86153133-86153152 | MS.gene89900:intron | 35.0% |
| AAGTCTAGGGGAATATCACA+AGG | - | chr4.2:86153897-86153916 | None:intergenic | 40.0% | |
| AATGCAACTCCTGTAACAAC+TGG | - | chr4.2:86154961-86154980 | None:intergenic | 40.0% | |
| AATTGGTGGGAAAAGTGGAA+AGG | - | chr4.2:86151075-86151094 | None:intergenic | 40.0% | |
| ACCTTCTTATGGATGCCAAT+TGG | + | chr4.2:86154760-86154779 | MS.gene89900:CDS | 40.0% | |
| AGATAGATCAAACCAAACCG+TGG | + | chr4.2:86151112-86151131 | MS.gene89900:CDS | 40.0% | |
| ATAGATGATTTCGAGAGCAG+AGG | - | chr4.2:86152523-86152542 | None:intergenic | 40.0% | |
| ATGGACCATGGTTTGAATTG+GGG | - | chr4.2:86153317-86153336 | None:intergenic | 40.0% | |
| CACATTACAGGAAGGATACA+TGG | + | chr4.2:86154630-86154649 | MS.gene89900:intron | 40.0% | |
| CATGTTCCATGTGTAACAAG+AGG | - | chr4.2:86151856-86151875 | None:intergenic | 40.0% | |
| CTAGATCCTCTTGTTACACA+TGG | + | chr4.2:86151847-86151866 | MS.gene89900:intron | 40.0% | |
| GAGAGCTTTCAAGAAAAGGA+AGG | - | chr4.2:86152560-86152579 | None:intergenic | 40.0% | |
| GATGGTTACAAAAACAGGGA+GGG | + | chr4.2:86151520-86151539 | MS.gene89900:CDS | 40.0% | |
| GTAGAGAACCGTTTCTATTG+AGG | + | chr4.2:86155145-86155164 | MS.gene89900:CDS | 40.0% | |
| GTGCTACATTTGGAAATTGG+TGG | - | chr4.2:86151089-86151108 | None:intergenic | 40.0% | |
| GTTGTTACAGGAGTTGCATT+AGG | + | chr4.2:86154961-86154980 | MS.gene89900:CDS | 40.0% | |
| TAATCTTTGTCACATTCGCG+GGG | + | chr4.2:86151303-86151322 | MS.gene89900:CDS | 40.0% | |
| TAGATGATTTCGAGAGCAGA+GGG | - | chr4.2:86152522-86152541 | None:intergenic | 40.0% | |
| TCCAATTGGCATCCATAAGA+AGG | - | chr4.2:86154764-86154783 | None:intergenic | 40.0% | |
| TGATGGTTACAAAAACAGGG+AGG | + | chr4.2:86151519-86151538 | MS.gene89900:CDS | 40.0% | |
| TGTGGGCCATGAAGTTATAT+CGG | - | chr4.2:86154247-86154266 | None:intergenic | 40.0% | |
| TTGAACACTTTCCATGTCTC+TGG | - | chr4.2:86151398-86151417 | None:intergenic | 40.0% | |
| TTGGAAATTGGTGGGAAAAG+TGG | - | chr4.2:86151080-86151099 | None:intergenic | 40.0% | |
| ! | AAGACGTGGAGATTGTTTCT+CGG | + | chr4.2:86151336-86151355 | MS.gene89900:CDS | 40.0% |
| ! | AGGTGACTTAGTGATTTGTC+CGG | + | chr4.2:86155110-86155129 | MS.gene89900:CDS | 40.0% |
| ! | CAGGGACTTTTTGTTGAGTA+AGG | + | chr4.2:86153970-86153989 | MS.gene89900:intron | 40.0% |
| ! | GGTTAAGAGTGCAAATAGAG+GGG | - | chr4.2:86154743-86154762 | None:intergenic | 40.0% |
| ! | GTGATCTCATAAGTTGGCAT+AGG | - | chr4.2:86155300-86155319 | None:intergenic | 40.0% |
| ! | TGTTGGTGAACACAAGAAAG+AGG | + | chr4.2:86151574-86151593 | MS.gene89900:CDS | 40.0% |
| ! | TTTGGATGGTTTGGGAGATT+CGG | - | chr4.2:86152421-86152440 | None:intergenic | 40.0% |
| !! | AAGGGGGTTTTATATCTTGG+AGG | + | chr4.2:86152477-86152496 | MS.gene89900:intron | 40.0% |
| !! | AATTTGCCTGATTTGGGACT+GGG | + | chr4.2:86151623-86151642 | MS.gene89900:CDS | 40.0% |
| !! | GGAAAGTGTTCAATTCGTTC+GGG | + | chr4.2:86151405-86151424 | MS.gene89900:CDS | 40.0% |
| !! | GGAGGATATTTTGGATGGTT+TGG | - | chr4.2:86152430-86152449 | None:intergenic | 40.0% |
| !! | GGCACGATACTTTTGATTGA+AGG | - | chr4.2:86153485-86153504 | None:intergenic | 40.0% |
| !! | TCTTGGTAATGGGTCACATT+TGG | - | chr4.2:86154665-86154684 | None:intergenic | 40.0% |
| !! | TGTGTGTGTCACTTCTTCAT+AGG | - | chr4.2:86153391-86153410 | None:intergenic | 40.0% |
| !!! | CAAATAGAGGGGTTGGTTTT+TGG | - | chr4.2:86154732-86154751 | None:intergenic | 40.0% |
| !!! | GGCCCCTAATTTTTTGATGT+TGG | + | chr4.2:86153132-86153151 | MS.gene89900:intron | 40.0% |
| !!! | TGTTTTGATTGCCAAGGTCT+CGG | - | chr4.2:86151282-86151301 | None:intergenic | 40.0% |
| AAAGGAAGGGGAGAACTTTG+GGG | + | chr4.2:86152311-86152330 | MS.gene89900:intron | 45.0% | |
| AAGGAACCAGGAGTTCTTGT+TGG | + | chr4.2:86151557-86151576 | MS.gene89900:CDS | 45.0% | |
| AATGGCTCAACCATCAACCT+TGG | - | chr4.2:86151455-86151474 | None:intergenic | 45.0% | |
| AATGGGTCACATTTGGTCCT+TGG | - | chr4.2:86154658-86154677 | None:intergenic | 45.0% | |
| AGGAAGGATACATGGTACCA+AGG | + | chr4.2:86154638-86154657 | MS.gene89900:intron | 45.0% | |
| CATGGCCCACAAAACAGTTA+AGG | + | chr4.2:86154256-86154275 | MS.gene89900:intron | 45.0% | |
| CCACCCAAAAAAGGTCAAAG+TGG | + | chr4.2:86154898-86154917 | MS.gene89900:CDS | 45.0% | |
| CCACTGCAAGTCAATTCCAA+AGG | - | chr4.2:86155339-86155358 | None:intergenic | 45.0% | |
| CGGGAAACGATACATTGTCA+CGG | + | chr4.2:86151424-86151443 | MS.gene89900:CDS | 45.0% | |
| GAAAGGAAGGGGAGAACTTT+GGG | + | chr4.2:86152310-86152329 | MS.gene89900:intron | 45.0% | |
| GCTATTCTTGCAGGAACAGA+TGG | + | chr4.2:86155456-86155475 | MS.gene89900:CDS | 45.0% | |
| GCTTCGTATTAATCGCGACA+GGG | - | chr4.2:86155209-86155228 | None:intergenic | 45.0% | |
| GGGAGAGAGCTTTCAAGAAA+AGG | - | chr4.2:86152564-86152583 | None:intergenic | 45.0% | |
| TCTCTACATGTCGTTCCTTC+CGG | - | chr4.2:86155132-86155151 | None:intergenic | 45.0% | |
| TGCTTCGTATTAATCGCGAC+AGG | - | chr4.2:86155210-86155229 | None:intergenic | 45.0% | |
| TGGACCATGGTTTGAATTGG+GGG | - | chr4.2:86153316-86153335 | None:intergenic | 45.0% | |
| TGTTCACCAACAAGAACTCC+TGG | - | chr4.2:86151566-86151585 | None:intergenic | 45.0% | |
| ! | AAGAGTGCAAATAGAGGGGT+TGG | - | chr4.2:86154739-86154758 | None:intergenic | 45.0% |
| ! | GACTTAGTGATTTGTCCGGA+AGG | + | chr4.2:86155114-86155133 | MS.gene89900:CDS | 45.0% |
| ! | GGGCTTAGAAGCTTGTTTCT+TGG | - | chr4.2:86154682-86154701 | None:intergenic | 45.0% |
| ! | TGGGAGTAGATAAGGTGCTA+GGG | + | chr4.2:86151489-86151508 | MS.gene89900:CDS | 45.0% |
| ! | TTCGAGAGCAGAGGGTTTTT+GGG | - | chr4.2:86152514-86152533 | None:intergenic | 45.0% |
| ! | TTGGGAGTAGATAAGGTGCT+AGG | + | chr4.2:86151488-86151507 | MS.gene89900:CDS | 45.0% |
| ! | TTTCGAGAGCAGAGGGTTTT+TGG | - | chr4.2:86152515-86152534 | None:intergenic | 45.0% |
| !! | AGTGGGTTTGTTAAGGAACC+AGG | + | chr4.2:86151545-86151564 | MS.gene89900:CDS | 45.0% |
| !! | CAATTTGCCTGATTTGGGAC+TGG | + | chr4.2:86151622-86151641 | MS.gene89900:CDS | 45.0% |
| !! | CCTTTGGAATTGACTTGCAG+TGG | + | chr4.2:86155336-86155355 | MS.gene89900:CDS | 45.0% |
| !! | GAAAGCGCAACGGCTTTTAT+AGG | - | chr4.2:86155042-86155061 | None:intergenic | 45.0% |
| !! | GTGTGTCACTTCTTCATAGG+TGG | - | chr4.2:86153388-86153407 | None:intergenic | 45.0% |
| !! | TGGAATTGACTTGCAGTGGA+GGG | + | chr4.2:86155340-86155359 | MS.gene89900:CDS | 45.0% |
| !! | TTGGAATTGACTTGCAGTGG+AGG | + | chr4.2:86155339-86155358 | MS.gene89900:CDS | 45.0% |
| !!! | CCACTTTGACCTTTTTTGGG+TGG | - | chr4.2:86154901-86154920 | None:intergenic | 45.0% |
| !!! | CTTTGACCTTTTTTGGGTGG+TGG | - | chr4.2:86154898-86154917 | None:intergenic | 45.0% |
| !!! | TTTTATGGAACATCGGCTCG+CGG | + | chr4.2:86155237-86155256 | MS.gene89900:CDS | 45.0% |
| !! | ATAAAATTTAATTACATTTA+TGG | + | chr4.2:86154030-86154049 | MS.gene89900:intron | 5.0% |
| !!! | TTTTCAAAAAAAAAATATAT+TGG | + | chr4.2:86152045-86152064 | MS.gene89900:intron | 5.0% |
| AAAGACAGATGGAGCAGACC+AGG | - | chr4.2:86153267-86153286 | None:intergenic | 50.0% | |
| AAGACAGATGGAGCAGACCA+GGG | - | chr4.2:86153266-86153285 | None:intergenic | 50.0% | |
| ACAAAAACAGGGAGGGCAAG+TGG | + | chr4.2:86151527-86151546 | MS.gene89900:CDS | 50.0% | |
| AGTGCGACGAGCATGTAGTA+TGG | - | chr4.2:86151182-86151201 | None:intergenic | 50.0% | |
| CAAAAACAGGGAGGGCAAGT+GGG | + | chr4.2:86151528-86151547 | MS.gene89900:CDS | 50.0% | |
| CCAAGGTCTCGGAGACAAAT+AGG | - | chr4.2:86151271-86151290 | None:intergenic | 50.0% | |
| CCTATTTGTCTCCGAGACCT+TGG | + | chr4.2:86151268-86151287 | MS.gene89900:CDS | 50.0% | |
| GGAAAGGAAGGGGAGAACTT+TGG | + | chr4.2:86152309-86152328 | MS.gene89900:intron | 50.0% | |
| GGGCCATGAAGTTATATCGG+TGG | - | chr4.2:86154244-86154263 | None:intergenic | 50.0% | |
| GGGGCTAAGGATAAAAGACG+TGG | + | chr4.2:86151322-86151341 | MS.gene89900:CDS | 50.0% | |
| GGTGCTAGGGACTGAATTGA+TGG | + | chr4.2:86151502-86151521 | MS.gene89900:CDS | 50.0% | |
| TATCGGTGGTTTCCTCCATG+TGG | - | chr4.2:86154230-86154249 | None:intergenic | 50.0% | |
| TGGTCCCCCAATTCAAACCA+TGG | + | chr4.2:86153309-86153328 | MS.gene89900:intron | 50.0% | |
| TTTCTCGGTCAGTGTTGCCT+AGG | + | chr4.2:86151351-86151370 | MS.gene89900:CDS | 50.0% | |
| ! | ACATTGTCACGGCTAGTCCA+AGG | + | chr4.2:86151435-86151454 | MS.gene89900:CDS | 50.0% |
| ! | TCGAGAGCAGAGGGTTTTTG+GGG | - | chr4.2:86152513-86152532 | None:intergenic | 50.0% |
| !! | GAGGGCAAGTGGGTTTGTTA+AGG | + | chr4.2:86151538-86151557 | MS.gene89900:CDS | 50.0% |
| !!! | ACCAGGGGAGCAGTTTTGTT+AGG | - | chr4.2:86153250-86153269 | None:intergenic | 50.0% |
| !!! | GAGCAGTTTTGTTAGGCCAC+CGG | - | chr4.2:86153243-86153262 | None:intergenic | 50.0% |
| !!! | TGACCTTTTTTGGGTGGTGG+TGG | - | chr4.2:86154895-86154914 | None:intergenic | 50.0% |
| ACGTCCTCGGCATAGAACCT+AGG | - | chr4.2:86151371-86151390 | None:intergenic | 55.0% | |
| AGACAGATGGAGCAGACCAG+GGG | - | chr4.2:86153265-86153284 | None:intergenic | 55.0% | |
| AGGACGTGCATCCAGAGACA+TGG | + | chr4.2:86151384-86151403 | MS.gene89900:CDS | 55.0% | |
| AGGGTTCTTGGAGGGACTCT+TGG | + | chr4.2:86155396-86155415 | MS.gene89900:CDS | 55.0% | |
| AGTCTCGAGGGGAAAGGAAG+GGG | + | chr4.2:86152299-86152318 | MS.gene89900:intron | 55.0% | |
| ATGCACTTCGCGACACGAGA+AGG | - | chr4.2:86151157-86151176 | None:intergenic | 55.0% | |
| CCTCCACCACCACCCAAAAA+AGG | + | chr4.2:86154889-86154908 | MS.gene89900:CDS | 55.0% | |
| CTGTCTCCCAGTCCCAAATC+AGG | - | chr4.2:86151632-86151651 | None:intergenic | 55.0% | |
| GAGTCTCGAGGGGAAAGGAA+GGG | + | chr4.2:86152298-86152317 | MS.gene89900:intron | 55.0% | |
| GCCTAACAAAACTGCTCCCC+TGG | + | chr4.2:86153246-86153265 | MS.gene89900:intron | 55.0% | |
| GGCTCGCGGACACAAATTGT+TGG | + | chr4.2:86155251-86155270 | MS.gene89900:CDS | 55.0% | |
| GTGGTACAAGCTGTACGGCT+TGG | - | chr4.2:86153825-86153844 | None:intergenic | 55.0% | |
| GTTGCCTAGGTTCTATGCCG+AGG | + | chr4.2:86151364-86151383 | MS.gene89900:CDS | 55.0% | |
| TGCACTTCGCGACACGAGAA+GGG | - | chr4.2:86151156-86151175 | None:intergenic | 55.0% | |
| TGTCTCTGGATGCACGTCCT+CGG | - | chr4.2:86151384-86151403 | None:intergenic | 55.0% | |
| TTGTCACATTCGCGGGGCTA+AGG | + | chr4.2:86151309-86151328 | MS.gene89900:CDS | 55.0% | |
| TTTGGGAGTCTCGAGGGGAA+AGG | + | chr4.2:86152293-86152312 | MS.gene89900:intron | 55.0% | |
| ! | AGCTCTCTTTGGGAGTCTCG+AGG | + | chr4.2:86152286-86152305 | MS.gene89900:intron | 55.0% |
| ! | CACGGCTAGTCCAAGGTTGA+TGG | + | chr4.2:86151442-86151461 | MS.gene89900:CDS | 55.0% |
| ! | CTCTCTTTGGGAGTCTCGAG+GGG | + | chr4.2:86152288-86152307 | MS.gene89900:intron | 55.0% |
| ! | GCTCTCTTTGGGAGTCTCGA+GGG | + | chr4.2:86152287-86152306 | MS.gene89900:intron | 55.0% |
| !! | ACACGAGAAGGGTGCCATCT+AGG | - | chr4.2:86151145-86151164 | None:intergenic | 55.0% |
| !! | CGAGAGCAGAGGGTTTTTGG+GGG | - | chr4.2:86152512-86152531 | None:intergenic | 55.0% |
| !! | GAGAAGGGTGCCATCTAGGT+CGG | - | chr4.2:86151141-86151160 | None:intergenic | 55.0% |
| !! | GAGAGCAGAGGGTTTTTGGG+GGG | - | chr4.2:86152511-86152530 | None:intergenic | 55.0% |
| !!! | CCTTTTTTGGGTGGTGGTGG+AGG | - | chr4.2:86154892-86154911 | None:intergenic | 55.0% |
| ACCGTGGCATCCGACCTAGA+TGG | + | chr4.2:86151128-86151147 | MS.gene89900:CDS | 60.0% | |
| ATGCTCGTCGCACTCGAAGC+TGG | + | chr4.2:86151188-86151207 | MS.gene89900:CDS | 60.0% | |
| CTAGGTCGGATGCCACGGTT+TGG | - | chr4.2:86151127-86151146 | None:intergenic | 60.0% | |
| GCCATCTAGGTCGGATGCCA+CGG | - | chr4.2:86151132-86151151 | None:intergenic | 60.0% | |
| GGAGTCTCGAGGGGAAAGGA+AGG | + | chr4.2:86152297-86152316 | MS.gene89900:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 86151065 | 86155506 | 86151065 | ID=MS.gene89900 |
| chr4.2 | mRNA | 86151065 | 86155506 | 86151065 | ID=MS.gene89900.t1;Parent=MS.gene89900 |
| chr4.2 | exon | 86151065 | 86151685 | 86151065 | ID=MS.gene89900.t1.exon1;Parent=MS.gene89900.t1 |
| chr4.2 | CDS | 86151065 | 86151685 | 86151065 | ID=cds.MS.gene89900.t1;Parent=MS.gene89900.t1 |
| chr4.2 | exon | 86154640 | 86155506 | 86154640 | ID=MS.gene89900.t1.exon2;Parent=MS.gene89900.t1 |
| chr4.2 | CDS | 86154640 | 86155506 | 86154640 | ID=cds.MS.gene89900.t1;Parent=MS.gene89900.t1 |
| Gene Sequence |
| Protein sequence |
