Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33484.t1 | XP_013455158.1 | 99.2 | 495 | 4 | 0 | 1 | 495 | 1 | 495 | 1.60E-276 | 961.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33484.t1 | O80437 | 78.6 | 490 | 103 | 1 | 7 | 494 | 10 | 499 | 4.8e-226 | 785.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33484.t1 | A0A072UIH6 | 99.2 | 495 | 4 | 0 | 1 | 495 | 1 | 495 | 1.1e-276 | 961.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052744 | MS.gene33484 | 0.853129 | 2.93E-61 | -1.69E-46 |
| MS.gene061071 | MS.gene33484 | 0.85406 | 1.58E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056794 | MS.gene33484 | PPI |
| MS.gene019646 | MS.gene33484 | PPI |
| MS.gene84826 | MS.gene33484 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33484.t1 | MTR_4g415290 | 99.192 | 495 | 4 | 0 | 1 | 495 | 1 | 495 | 0.0 | 996 |
| MS.gene33484.t1 | MTR_7g067380 | 84.040 | 495 | 77 | 2 | 1 | 494 | 3 | 496 | 0.0 | 851 |
| MS.gene33484.t1 | MTR_8g030620 | 61.914 | 491 | 180 | 5 | 7 | 491 | 10 | 499 | 0.0 | 630 |
| MS.gene33484.t1 | MTR_1g040500 | 57.895 | 494 | 200 | 5 | 7 | 494 | 6 | 497 | 0.0 | 588 |
| MS.gene33484.t1 | MTR_5g080360 | 51.046 | 478 | 224 | 4 | 21 | 492 | 2 | 475 | 3.16e-164 | 474 |
| MS.gene33484.t1 | MTR_5g091660 | 50.713 | 491 | 226 | 7 | 7 | 491 | 51 | 531 | 3.71e-162 | 470 |
| MS.gene33484.t1 | MTR_3g448430 | 46.830 | 489 | 241 | 8 | 8 | 489 | 35 | 511 | 1.69e-150 | 439 |
| MS.gene33484.t1 | MTR_1g086650 | 43.542 | 480 | 254 | 8 | 17 | 489 | 60 | 529 | 2.42e-127 | 381 |
| MS.gene33484.t1 | MTR_5g061520 | 42.300 | 487 | 266 | 8 | 15 | 495 | 10 | 487 | 2.48e-121 | 364 |
| MS.gene33484.t1 | MTR_3g048330 | 52.837 | 282 | 120 | 3 | 220 | 493 | 1 | 277 | 1.24e-99 | 301 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33484.t1 | AT2G38110 | 79.794 | 485 | 96 | 1 | 7 | 489 | 10 | 494 | 0.0 | 788 |
| MS.gene33484.t1 | AT4G00400 | 61.680 | 488 | 181 | 5 | 7 | 491 | 10 | 494 | 0.0 | 603 |
| MS.gene33484.t1 | AT1G01610 | 61.179 | 492 | 184 | 6 | 7 | 494 | 10 | 498 | 0.0 | 595 |
| MS.gene33484.t1 | AT3G11430 | 51.346 | 483 | 213 | 5 | 19 | 489 | 9 | 481 | 8.08e-166 | 478 |
| MS.gene33484.t1 | AT5G06090 | 48.560 | 486 | 222 | 6 | 19 | 489 | 7 | 479 | 8.48e-153 | 445 |
| MS.gene33484.t1 | AT1G06520 | 44.961 | 516 | 248 | 11 | 5 | 490 | 76 | 585 | 3.63e-146 | 431 |
| MS.gene33484.t1 | AT1G02390 | 39.468 | 489 | 276 | 9 | 16 | 490 | 46 | 528 | 1.36e-110 | 338 |
| MS.gene33484.t1 | AT4G01950 | 39.351 | 493 | 269 | 11 | 17 | 492 | 41 | 520 | 7.05e-108 | 331 |
| MS.gene33484.t1 | AT4G01950 | 39.351 | 493 | 269 | 11 | 17 | 492 | 69 | 548 | 1.94e-107 | 330 |
| MS.gene33484.t1 | AT3G11325 | 49.237 | 262 | 100 | 1 | 228 | 489 | 144 | 372 | 1.04e-83 | 264 |
| MS.gene33484.t1 | AT3G11325 | 37.143 | 105 | 66 | 0 | 31 | 135 | 9 | 113 | 2.49e-16 | 81.3 |
| MS.gene33484.t1 | AT3G11325 | 49.237 | 262 | 100 | 1 | 228 | 489 | 141 | 369 | 1.42e-83 | 264 |
| MS.gene33484.t1 | AT3G11325 | 37.143 | 105 | 66 | 0 | 31 | 135 | 6 | 110 | 2.88e-16 | 80.9 |
Find 109 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCCTTCCTTGTTAAAT+TGG | 0.158055 | 4.3:-83181323 | None:intergenic |
| GAGGCAGTTATGAAAGAATT+TGG | 0.160182 | 4.3:+83177403 | MS.gene33484:CDS |
| TTGCACTCTTAACCTTCTTA+TGG | 0.235930 | 4.3:+83180642 | MS.gene33484:CDS |
| GAATCATACTTTCAATCTTA+AGG | 0.293063 | 4.3:+83180675 | MS.gene33484:CDS |
| GAGTAACAATTTGCCTGATT+TGG | 0.303564 | 4.3:+83177426 | MS.gene33484:CDS |
| AATTATATTCAAAGGGTTCT+TGG | 0.305203 | 4.3:+83181277 | MS.gene33484:CDS |
| AGAAGCTTGTTTCTTGGTAA+TGG | 0.311340 | 4.3:-83180566 | None:intergenic |
| GATAAGTATGCTATTCTTGC+AGG | 0.334585 | 4.3:+83181340 | MS.gene33484:CDS |
| GGGCTTAGAAGCTTGTTTCT+TGG | 0.336364 | 4.3:-83180572 | None:intergenic |
| TCTCTACATGTCGTTCCTTC+CGG | 0.339845 | 4.3:-83181022 | None:intergenic |
| TTTCTTGAATCAGTTGCCTT+TGG | 0.341998 | 4.3:+83181213 | MS.gene33484:CDS |
| AGTAACAATTTGCCTGATTT+GGG | 0.342680 | 4.3:+83177427 | MS.gene33484:CDS |
| AATCATACTTTCAATCTTAA+GGG | 0.343266 | 4.3:+83180676 | MS.gene33484:CDS |
| TTTGTGCTACATTTGAAAAT+TGG | 0.344058 | 4.3:-83176899 | None:intergenic |
| AGGGTTCTTGGAGGGACTCT+TGG | 0.352717 | 4.3:+83181289 | MS.gene33484:CDS |
| GGATTCATGAACACAAAATA+AGG | 0.356896 | 4.3:-83181169 | None:intergenic |
| CCAAGGTCTCGGAGACAAAT+AGG | 0.357156 | 4.3:-83177078 | None:intergenic |
| GAAGCTTGTTTCTTGGTAAT+GGG | 0.362820 | 4.3:-83180565 | None:intergenic |
| TGGAAAGTGTTCAATTCGTT+CGG | 0.372012 | 4.3:+83177214 | MS.gene33484:CDS |
| AGGCAGTTATGAAAGAATTT+GGG | 0.373459 | 4.3:+83177404 | MS.gene33484:CDS |
| TCTTGGTAATGGGTCACATT+TGG | 0.374038 | 4.3:-83180555 | None:intergenic |
| TTGAAAATTGGTGGGAAAAG+TGG | 0.380347 | 4.3:-83176887 | None:intergenic |
| TTGAACACTTTCCATGTCTC+TGG | 0.382477 | 4.3:-83177205 | None:intergenic |
| GTTGTTACAGGAGTTGCATT+AGG | 0.394796 | 4.3:+83180854 | MS.gene33484:CDS |
| TAAAAGCCGTTGCGCTTTCA+AGG | 0.395510 | 4.3:+83180936 | MS.gene33484:CDS |
| CTGGATCTAAAACTGTTCTA+TGG | 0.403705 | 4.3:-83180832 | None:intergenic |
| GAGGGCAAGTGGGTTTGTTA+AGG | 0.407100 | 4.3:+83177348 | MS.gene33484:CDS |
| TGGTACAATTATAAATTACT+TGG | 0.415906 | 4.3:+83180734 | MS.gene33484:CDS |
| ACCTTCTTATGGATGCCAAT+TGG | 0.419088 | 4.3:+83180653 | MS.gene33484:CDS |
| GGAAAGTGTTCAATTCGTTC+GGG | 0.425126 | 4.3:+83177215 | MS.gene33484:CDS |
| AGTGCGACGAGCATGTAGTA+TGG | 0.432920 | 4.3:-83176989 | None:intergenic |
| AATGCAACTCCTGTAACAAC+TGG | 0.433295 | 4.3:-83180851 | None:intergenic |
| CACGGCTAGTCCAAGGTTGA+TGG | 0.435779 | 4.3:+83177252 | MS.gene33484:CDS |
| AATGGGTCACATTTGGTCCT+TGG | 0.442068 | 4.3:-83180548 | None:intergenic |
| ATTGAAAGTATGATTCCAAT+TGG | 0.443499 | 4.3:-83180668 | None:intergenic |
| CTGTCTCCCAGTCCCAAATC+AGG | 0.443748 | 4.3:-83177439 | None:intergenic |
| CAATTTGCCTGATTTGGGAC+TGG | 0.449611 | 4.3:+83177432 | MS.gene33484:CDS |
| ACACGAGAAGGGTGCCATCT+AGG | 0.454550 | 4.3:-83176952 | None:intergenic |
| ATGCTCGTCGCACTCGAAGC+TGG | 0.455449 | 4.3:+83176998 | MS.gene33484:CDS |
| AAGAGTGCAAATAGAGGGGT+TGG | 0.455638 | 4.3:-83180629 | None:intergenic |
| GTAGAGAACCGTTTCTATTG+AGG | 0.458187 | 4.3:+83181038 | MS.gene33484:CDS |
| TCCAATTGGCATCCATAAGA+AGG | 0.458669 | 4.3:-83180654 | None:intergenic |
| AATTTGCCTGATTTGGGACT+GGG | 0.468437 | 4.3:+83177433 | MS.gene33484:CDS |
| AAGGAACCAGGAGTTCTTGT+TGG | 0.472018 | 4.3:+83177367 | MS.gene33484:CDS |
| TGCTTCGTATTAATCGCGAC+AGG | 0.478003 | 4.3:-83181100 | None:intergenic |
| TTTCTCGGTCAGTGTTGCCT+AGG | 0.478351 | 4.3:+83177161 | MS.gene33484:CDS |
| CTAGGTCGGATGCCACGGTT+TGG | 0.479842 | 4.3:-83176934 | None:intergenic |
| TTGTCACATTCGCGGGGCTA+AGG | 0.481220 | 4.3:+83177119 | MS.gene33484:CDS |
| GAAATATACGAAAGGGACTA+AGG | 0.490330 | 4.3:-83177050 | None:intergenic |
| CCTTTGGAATTGACTTGCAG+TGG | 0.493619 | 4.3:+83181229 | MS.gene33484:CDS |
| TTAATCTTTGTCACATTCGC+GGG | 0.496943 | 4.3:+83177112 | MS.gene33484:CDS |
| ATAAAGAAATTGCTTGAAGA+AGG | 0.497977 | 4.3:+83180983 | MS.gene33484:CDS |
| GGCTCGCGGACACAAATTGT+TGG | 0.498712 | 4.3:+83181144 | MS.gene33484:CDS |
| CACATTACAGGAAGGATACA+TGG | 0.503595 | 4.3:+83180523 | MS.gene33484:intron |
| AGTTGCAAATTATATTCAAA+GGG | 0.504087 | 4.3:+83181270 | MS.gene33484:CDS |
| AAGTTGCAAATTATATTCAA+AGG | 0.504845 | 4.3:+83181269 | MS.gene33484:CDS |
| TTTGGGAGTAGATAAGGTGC+TGG | 0.506447 | 4.3:+83177297 | MS.gene33484:CDS |
| TTGGGAGTAGATAAGGTGCT+GGG | 0.507686 | 4.3:+83177298 | MS.gene33484:CDS |
| TGTTCACCAACAAGAACTCC+TGG | 0.509031 | 4.3:-83177373 | None:intergenic |
| AAGAAAGTGATCTCATAAGT+TGG | 0.509395 | 4.3:-83181196 | None:intergenic |
| GCCATCTAGGTCGGATGCCA+CGG | 0.509743 | 4.3:-83176939 | None:intergenic |
| GCTATTCTTGCAGGAACAGA+TGG | 0.510039 | 4.3:+83181349 | MS.gene33484:CDS |
| GGAATAAGAGTAATTAGAAA+AGG | 0.510705 | 4.3:+83180755 | MS.gene33484:CDS |
| CCTATTTGTCTCCGAGACCT+TGG | 0.512360 | 4.3:+83177078 | MS.gene33484:CDS |
| AGGTTAAGAGTGCAAATAGA+GGG | 0.520148 | 4.3:-83180634 | None:intergenic |
| GGTGCTGGGGACTGAATTGA+TGG | 0.520652 | 4.3:+83177312 | MS.gene33484:CDS |
| AGGTGACTTAGTGATTTGTC+CGG | 0.526292 | 4.3:+83181003 | MS.gene33484:CDS |
| AAGACGTGGAGATTGTTTCT+CGG | 0.526609 | 4.3:+83177146 | MS.gene33484:CDS |
| AAGGTTAAGAGTGCAAATAG+AGG | 0.530421 | 4.3:-83180635 | None:intergenic |
| TGACTTCATGTCTATTTGCA+AGG | 0.539001 | 4.3:+83177474 | MS.gene33484:CDS |
| GTGCTACATTTGAAAATTGG+TGG | 0.542118 | 4.3:-83176896 | None:intergenic |
| GCACTAAACCTCAATAGAAA+CGG | 0.544972 | 4.3:-83181046 | None:intergenic |
| ATATTCAAAGGGTTCTTGGA+GGG | 0.546066 | 4.3:+83181281 | MS.gene33484:CDS |
| ATGCACTTCGCGACACGAGA+AGG | 0.548044 | 4.3:-83176964 | None:intergenic |
| TGTTGGTGAACACAAGAAAG+AGG | 0.548662 | 4.3:+83177384 | MS.gene33484:CDS |
| AGTGGGTTTGTTAAGGAACC+AGG | 0.551989 | 4.3:+83177355 | MS.gene33484:CDS |
| TGCTACATTTGAAAATTGGT+GGG | 0.553187 | 4.3:-83176895 | None:intergenic |
| AATGGCTCAACCATCAACCT+TGG | 0.553342 | 4.3:-83177262 | None:intergenic |
| TGTCTCTGGATGCACGTCCT+CGG | 0.553696 | 4.3:-83177191 | None:intergenic |
| GGTACGTGAAATATACGAAA+GGG | 0.556590 | 4.3:-83177057 | None:intergenic |
| ATGTACCAATTTAACAAGGA+AGG | 0.557734 | 4.3:+83181318 | MS.gene33484:CDS |
| TATATTCAAAGGGTTCTTGG+AGG | 0.558009 | 4.3:+83181280 | MS.gene33484:CDS |
| AAAAGCCGTTGCGCTTTCAA+GGG | 0.561930 | 4.3:+83180937 | MS.gene33484:CDS |
| TGGAATTGACTTGCAGTGGA+GGG | 0.564415 | 4.3:+83181233 | MS.gene33484:CDS |
| TTGGAATTGACTTGCAGTGG+AGG | 0.574024 | 4.3:+83181232 | MS.gene33484:CDS |
| ATTAATCTTTGTCACATTCG+CGG | 0.578687 | 4.3:+83177111 | MS.gene33484:CDS |
| GTGATCTCATAAGTTGGCAT+AGG | 0.582217 | 4.3:-83181190 | None:intergenic |
| ACCGTGGCATCCGACCTAGA+TGG | 0.591495 | 4.3:+83176938 | MS.gene33484:CDS |
| GGTTAAGAGTGCAAATAGAG+GGG | 0.592460 | 4.3:-83180633 | None:intergenic |
| TGCACTTCGCGACACGAGAA+GGG | 0.596300 | 4.3:-83176963 | None:intergenic |
| AGGACGTGCATCCAGAGACA+TGG | 0.604083 | 4.3:+83177194 | MS.gene33484:CDS |
| TCTTTCCCTTGAAAGCGCAA+CGG | 0.605263 | 4.3:-83180942 | None:intergenic |
| AGGTACGTGAAATATACGAA+AGG | 0.608258 | 4.3:-83177058 | None:intergenic |
| GAGAAGGGTGCCATCTAGGT+CGG | 0.614645 | 4.3:-83176948 | None:intergenic |
| ACATTGTCACGGCTAGTCCA+AGG | 0.617998 | 4.3:+83177245 | MS.gene33484:CDS |
| GTTGCCTAGGTTCTATGCCG+AGG | 0.628644 | 4.3:+83177174 | MS.gene33484:CDS |
| GCTTCGTATTAATCGCGACA+GGG | 0.633339 | 4.3:-83181099 | None:intergenic |
| CCACTGCAAGTCAATTCCAA+AGG | 0.642771 | 4.3:-83181229 | None:intergenic |
| GACTTAGTGATTTGTCCGGA+AGG | 0.655073 | 4.3:+83181007 | MS.gene33484:CDS |
| ACGTCCTCGGCATAGAACCT+AGG | 0.656526 | 4.3:-83177178 | None:intergenic |
| AATTGGTGGGAAAAGTGGAA+AGG | 0.657733 | 4.3:-83176882 | None:intergenic |
| TTGAATGTACCAATTTAACA+AGG | 0.660163 | 4.3:+83181314 | MS.gene33484:CDS |
| TGGGAGTAGATAAGGTGCTG+GGG | 0.665648 | 4.3:+83177299 | MS.gene33484:CDS |
| TAATCTTTGTCACATTCGCG+GGG | 0.673980 | 4.3:+83177113 | MS.gene33484:CDS |
| AGGAAGGATACATGGTACCA+AGG | 0.684832 | 4.3:+83180531 | MS.gene33484:intron |
| CGGGAAACGATACATTGTCA+CGG | 0.691995 | 4.3:+83177234 | MS.gene33484:CDS |
| AGATAGATCAAACCAAACCG+TGG | 0.705896 | 4.3:+83176922 | MS.gene33484:CDS |
| GGGGCTAAGGATAAAAGACG+TGG | 0.717767 | 4.3:+83177132 | MS.gene33484:CDS |
| AAGGGAAAGAGATAGAGATG+CGG | 0.731861 | 4.3:+83180955 | MS.gene33484:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATACATAGTT+AGG | - | chr4.3:83180010-83180029 | None:intergenic | 10.0% |
| !! | ATAACAAAAATATATATGAA+TGG | - | chr4.3:83177952-83177971 | None:intergenic | 10.0% |
| !! | TGATGATTATTAAATTATAT+CGG | + | chr4.3:83178911-83178930 | MS.gene33484:intron | 10.0% |
| !!! | ATGAATGTTTTATTAATTAA+TGG | + | chr4.3:83177693-83177712 | MS.gene33484:intron | 10.0% |
| !! | AACTAACACATTATATAATT+TGG | - | chr4.3:83177568-83177587 | None:intergenic | 15.0% |
| !! | CAAAAACATGATAAATAAAT+AGG | - | chr4.3:83177926-83177945 | None:intergenic | 15.0% |
| !! | TAATAGACTATAATTTAGAA+TGG | + | chr4.3:83177771-83177790 | MS.gene33484:intron | 15.0% |
| !!! | ATTTTCATACATTTTTTATG+TGG | - | chr4.3:83179690-83179709 | None:intergenic | 15.0% |
| !!! | GATTTTTTTTTTTCTTCTAA+TGG | + | chr4.3:83180248-83180267 | MS.gene33484:intron | 15.0% |
| !!! | GATTTTTTTTTTTTTTGAAG+AGG | - | chr4.3:83179477-83179496 | None:intergenic | 15.0% |
| !!! | TTATATAATGTGTTAGTTTA+TGG | + | chr4.3:83177570-83177589 | MS.gene33484:intron | 15.0% |
| !!! | TTTTTTTTTCAATCTAACTT+AGG | + | chr4.3:83178459-83178478 | MS.gene33484:intron | 15.0% |
| !! | AAATAAAATTTAGGAAGTCT+AGG | - | chr4.3:83179756-83179775 | None:intergenic | 20.0% |
| !! | AACAAGGACAAATAAAATTT+AGG | - | chr4.3:83179765-83179784 | None:intergenic | 20.0% |
| !! | AAGTTGCAAATTATATTCAA+AGG | + | chr4.3:83181269-83181288 | MS.gene33484:CDS | 20.0% |
| !! | AATAAAATTTAGGAAGTCTA+GGG | - | chr4.3:83179755-83179774 | None:intergenic | 20.0% |
| !! | AATCATACTTTCAATCTTAA+GGG | + | chr4.3:83180676-83180695 | MS.gene33484:CDS | 20.0% |
| !! | AGAAAAGAAAAAAAAGAACA+AGG | - | chr4.3:83179781-83179800 | None:intergenic | 20.0% |
| !! | AGAAATAATTAGACTATGTT+TGG | - | chr4.3:83180503-83180522 | None:intergenic | 20.0% |
| !! | AGTTGCAAATTATATTCAAA+GGG | + | chr4.3:83181270-83181289 | MS.gene33484:CDS | 20.0% |
| !! | CAATTATAAAATCAGTTCTA+GGG | + | chr4.3:83179370-83179389 | MS.gene33484:intron | 20.0% |
| !! | GTAAATTGAGAAATCAAAAT+AGG | - | chr4.3:83178639-83178658 | None:intergenic | 20.0% |
| !! | TGACAACTAAAAAATTATAC+TGG | - | chr4.3:83178253-83178272 | None:intergenic | 20.0% |
| !! | TGGTACAATTATAAATTACT+TGG | + | chr4.3:83180734-83180753 | MS.gene33484:CDS | 20.0% |
| !! | TTATGATAACTTTATGAGTT+TGG | - | chr4.3:83179978-83179997 | None:intergenic | 20.0% |
| !! | TTTCTTCTTCTGTATATTAT+TGG | - | chr4.3:83179327-83179346 | None:intergenic | 20.0% |
| !!! | AACTTTAGAGAACAAAAAAA+TGG | - | chr4.3:83179136-83179155 | None:intergenic | 20.0% |
| !!! | AAGTTTTAGGTGAAAAAAAT+AGG | - | chr4.3:83178520-83178539 | None:intergenic | 20.0% |
| !!! | TATAAAGCATCAATAAAGTT+AGG | - | chr4.3:83179164-83179183 | None:intergenic | 20.0% |
| !!! | TCTTTTTCAAATTTCTGTTT+TGG | + | chr4.3:83178819-83178838 | MS.gene33484:intron | 20.0% |
| !!! | TTTTAGTTGTCACAAATTAA+GGG | + | chr4.3:83178261-83178280 | MS.gene33484:intron | 20.0% |
| !!! | TTTTATAGGCGAAATTATTT+CGG | - | chr4.3:83180921-83180940 | None:intergenic | 20.0% |
| !!! | TTTTTAGTTGTCACAAATTA+AGG | + | chr4.3:83178260-83178279 | MS.gene33484:intron | 20.0% |
| !!! | TTTTTGTAGATGTGATATTA+GGG | + | chr4.3:83178582-83178601 | MS.gene33484:intron | 20.0% |
| !!! | TTTTTTTTTTTGAAGAGGAT+TGG | - | chr4.3:83179472-83179491 | None:intergenic | 20.0% |
| ! | AAATTATCAGTTCATAGACT+AGG | - | chr4.3:83180052-83180071 | None:intergenic | 25.0% |
| ! | AAGTTATCCTAAAAAGCTTA+TGG | - | chr4.3:83180354-83180373 | None:intergenic | 25.0% |
| ! | AATAAATAGGCAGATAGATA+TGG | - | chr4.3:83177913-83177932 | None:intergenic | 25.0% |
| ! | AATTATATTCAAAGGGTTCT+TGG | + | chr4.3:83181277-83181296 | MS.gene33484:CDS | 25.0% |
| ! | AATTGGAAGATATCCAATTA+GGG | - | chr4.3:83179355-83179374 | None:intergenic | 25.0% |
| ! | AGAAGAAAAAAATCCCTAAT+TGG | + | chr4.3:83179339-83179358 | MS.gene33484:intron | 25.0% |
| ! | AGACATAAATTTAAGGAAAG+AGG | - | chr4.3:83179001-83179020 | None:intergenic | 25.0% |
| ! | ATAAAATTTAGGAAGTCTAG+GGG | - | chr4.3:83179754-83179773 | None:intergenic | 25.0% |
| ! | ATAAAGAAATTGCTTGAAGA+AGG | + | chr4.3:83180983-83181002 | MS.gene33484:CDS | 25.0% |
| ! | ATGTGATATTAGGGATTAAA+AGG | + | chr4.3:83178591-83178610 | MS.gene33484:intron | 25.0% |
| ! | ATTAAATTGACTACAGAAAC+TGG | - | chr4.3:83177873-83177892 | None:intergenic | 25.0% |
| ! | ATTGAGAAATCAAAATAGGA+AGG | - | chr4.3:83178635-83178654 | None:intergenic | 25.0% |
| ! | CAACTAAAAAATTATACTGG+AGG | - | chr4.3:83178250-83178269 | None:intergenic | 25.0% |
| ! | CAGATAGATATGGATATATT+AGG | - | chr4.3:83177903-83177922 | None:intergenic | 25.0% |
| ! | CCAATTATAAAATCAGTTCT+AGG | + | chr4.3:83179369-83179388 | MS.gene33484:intron | 25.0% |
| ! | CGAAAACAGACATAAATTTA+AGG | - | chr4.3:83179008-83179027 | None:intergenic | 25.0% |
| ! | GAATCATACTTTCAATCTTA+AGG | + | chr4.3:83180675-83180694 | MS.gene33484:CDS | 25.0% |
| ! | GGAATAAGAGTAATTAGAAA+AGG | + | chr4.3:83180755-83180774 | MS.gene33484:CDS | 25.0% |
| ! | GGATATAGAGATGTTAAAAT+GGG | - | chr4.3:83179451-83179470 | None:intergenic | 25.0% |
| ! | TAAAGATAGAAAAAGACAGA+TGG | - | chr4.3:83179078-83179097 | None:intergenic | 25.0% |
| ! | TAATTGGAAGATATCCAATT+AGG | - | chr4.3:83179356-83179375 | None:intergenic | 25.0% |
| ! | TACCCTCATGAAAAATAATT+GGG | - | chr4.3:83180595-83180614 | None:intergenic | 25.0% |
| ! | TGGATATAGAGATGTTAAAA+TGG | - | chr4.3:83179452-83179471 | None:intergenic | 25.0% |
| ! | TGTGATATTAGGGATTAAAA+GGG | + | chr4.3:83178592-83178611 | MS.gene33484:intron | 25.0% |
| ! | TTGAATGTACCAATTTAACA+AGG | + | chr4.3:83181314-83181333 | MS.gene33484:CDS | 25.0% |
| ! | TTTAGTTGTCACAAATTAAG+GGG | + | chr4.3:83178262-83178281 | MS.gene33484:intron | 25.0% |
| ! | TTTGTGCTACATTTGAAAAT+TGG | - | chr4.3:83176902-83176921 | None:intergenic | 25.0% |
| !! | AATTATACTGGAGGATATTT+TGG | - | chr4.3:83178241-83178260 | None:intergenic | 25.0% |
| !! | AATTGATGGTTACAAAAACA+GGG | + | chr4.3:83177326-83177345 | MS.gene33484:CDS | 25.0% |
| !! | AGACTATAATTTAGAATGGA+TGG | + | chr4.3:83177775-83177794 | MS.gene33484:intron | 25.0% |
| !! | AGTCATATTTCACAAGTTTT+AGG | - | chr4.3:83178533-83178552 | None:intergenic | 25.0% |
| !! | ATTGAAAGTATGATTCCAAT+TGG | - | chr4.3:83180671-83180690 | None:intergenic | 25.0% |
| !! | ATTTGTGAATGTCGATTAAA+AGG | - | chr4.3:83177624-83177643 | None:intergenic | 25.0% |
| !! | CATTTTATCATACTGTCATA+TGG | - | chr4.3:83179924-83179943 | None:intergenic | 25.0% |
| !! | CTAATTATTTCTCACATTAC+AGG | + | chr4.3:83180511-83180530 | MS.gene33484:intron | 25.0% |
| !! | CTTATTTCCATAAGCTTTTT+AGG | + | chr4.3:83180344-83180363 | MS.gene33484:intron | 25.0% |
| !! | GTTTTCGTGTATAATTTTTC+CGG | + | chr4.3:83179021-83179040 | MS.gene33484:intron | 25.0% |
| !! | GTTTTTGTAGATGTGATATT+AGG | + | chr4.3:83178581-83178600 | MS.gene33484:intron | 25.0% |
| !!! | AAGCAATTTTTTCAGGTAAA+GGG | - | chr4.3:83180715-83180734 | None:intergenic | 25.0% |
| !!! | AAGTCTTTTAGTTGAACTTA+TGG | + | chr4.3:83180286-83180305 | MS.gene33484:intron | 25.0% |
| !!! | AAGTTTGTTTTATGGAACAT+CGG | + | chr4.3:83181123-83181142 | MS.gene33484:CDS | 25.0% |
| !!! | AATTGACTAGTATTTTAGCT+TGG | - | chr4.3:83179402-83179421 | None:intergenic | 25.0% |
| !!! | ATTGACTAGTATTTTAGCTT+GGG | - | chr4.3:83179401-83179420 | None:intergenic | 25.0% |
| !!! | CCATTTGTTAAGACATTTTT+GGG | + | chr4.3:83177280-83177299 | MS.gene33484:CDS | 25.0% |
| !!! | CCTAGAACTGATTTTATAAT+TGG | - | chr4.3:83179372-83179391 | None:intergenic | 25.0% |
| !!! | TTCAAATTTCTGTTTTGGAT+GGG | + | chr4.3:83178824-83178843 | MS.gene33484:intron | 25.0% |
| !!! | TTTCAAATTTCTGTTTTGGA+TGG | + | chr4.3:83178823-83178842 | MS.gene33484:intron | 25.0% |
| AAGAAAGTGATCTCATAAGT+TGG | - | chr4.3:83181199-83181218 | None:intergenic | 30.0% | |
| ACAATAACTAAGCTCTCTTT+GGG | + | chr4.3:83178078-83178097 | MS.gene33484:intron | 30.0% | |
| ACCCAACATCAAAAAATTAG+GGG | - | chr4.3:83178937-83178956 | None:intergenic | 30.0% | |
| ACTACTACATAGTAATAGGT+TGG | - | chr4.3:83179641-83179660 | None:intergenic | 30.0% | |
| AGATCTACGAAGAAAGATTA+AGG | + | chr4.3:83181379-83181398 | MS.gene33484:CDS | 30.0% | |
| AGGCAGTTATGAAAGAATTT+GGG | + | chr4.3:83177404-83177423 | MS.gene33484:CDS | 30.0% | |
| AGTAACAATTTGCCTGATTT+GGG | + | chr4.3:83177427-83177446 | MS.gene33484:CDS | 30.0% | |
| ATGAACTGATAATTTCCACA+TGG | + | chr4.3:83180057-83180076 | MS.gene33484:intron | 30.0% | |
| ATGTACCAATTTAACAAGGA+AGG | + | chr4.3:83181318-83181337 | MS.gene33484:CDS | 30.0% | |
| ATTAATCTTTGTCACATTCG+CGG | + | chr4.3:83177111-83177130 | MS.gene33484:CDS | 30.0% | |
| CAATAAACACGATACTGATA+TGG | + | chr4.3:83179216-83179235 | MS.gene33484:intron | 30.0% | |
| CACCCAACATCAAAAAATTA+GGG | - | chr4.3:83178938-83178957 | None:intergenic | 30.0% | |
| CATAAATTTAAGGAAAGAGG+AGG | - | chr4.3:83178998-83179017 | None:intergenic | 30.0% | |
| CCCAAAAATGTCTTAACAAA+TGG | - | chr4.3:83177283-83177302 | None:intergenic | 30.0% | |
| CTACCCTCATGAAAAATAAT+TGG | - | chr4.3:83180596-83180615 | None:intergenic | 30.0% | |
| CTTATCCTTCCTTGTTAAAT+TGG | - | chr4.3:83181326-83181345 | None:intergenic | 30.0% | |
| CTTTACCTGAAAAAATTGCT+TGG | + | chr4.3:83180714-83180733 | MS.gene33484:CDS | 30.0% | |
| GAGTACTACTACATAGTAAT+AGG | - | chr4.3:83179645-83179664 | None:intergenic | 30.0% | |
| GGATTCATGAACACAAAATA+AGG | - | chr4.3:83181172-83181191 | None:intergenic | 30.0% | |
| GTCTGTTTGAGAGTTTAAAA+GGG | - | chr4.3:83178387-83178406 | None:intergenic | 30.0% | |
| TCACCCAACATCAAAAAATT+AGG | - | chr4.3:83178939-83178958 | None:intergenic | 30.0% | |
| TCTGTTTGAGAGTTTAAAAG+GGG | - | chr4.3:83178386-83178405 | None:intergenic | 30.0% | |
| TGCTACATTTGAAAATTGGT+GGG | - | chr4.3:83176898-83176917 | None:intergenic | 30.0% | |
| TGTCAGAAACAATCAATCTA+AGG | - | chr4.3:83179597-83179616 | None:intergenic | 30.0% | |
| TTAGTTGTCACAAATTAAGG+GGG | + | chr4.3:83178263-83178282 | MS.gene33484:intron | 30.0% | |
| TTCTAGATATCACAGATTCA+GGG | + | chr4.3:83179797-83179816 | MS.gene33484:intron | 30.0% | |
| TTTCTAGATATCACAGATTC+AGG | + | chr4.3:83179796-83179815 | MS.gene33484:intron | 30.0% | |
| ! | AGAAAACCTTAACTGTTTTG+TGG | - | chr4.3:83180110-83180129 | None:intergenic | 30.0% |
| ! | CAAAACAGTTAAGGTTTTCT+AGG | + | chr4.3:83180110-83180129 | MS.gene33484:intron | 30.0% |
| ! | CATGTAGCATGATTTCTTTT+AGG | + | chr4.3:83179846-83179865 | MS.gene33484:intron | 30.0% |
| ! | GAAAACCTTAACTGTTTTGT+GGG | - | chr4.3:83180109-83180128 | None:intergenic | 30.0% |
| ! | GAATTGATGGTTACAAAAAC+AGG | + | chr4.3:83177325-83177344 | MS.gene33484:CDS | 30.0% |
| ! | TGCTCTTTTTGCAGAATTAA+CGG | + | chr4.3:83181066-83181085 | MS.gene33484:CDS | 30.0% |
| ! | TTATTTCTCACATTACAGGA+AGG | + | chr4.3:83180515-83180534 | MS.gene33484:intron | 30.0% |
| !! | AAGCCCAATTATTTTTCATG+AGG | + | chr4.3:83180589-83180608 | MS.gene33484:CDS | 30.0% |
| !! | AGCCCAATTATTTTTCATGA+GGG | + | chr4.3:83180590-83180609 | MS.gene33484:CDS | 30.0% |
| !! | ATTAAGGGGGTTTTATATCT+TGG | + | chr4.3:83178276-83178295 | MS.gene33484:intron | 30.0% |
| !! | ATTGAGTTGAGTTGGATTAT+AGG | + | chr4.3:83179419-83179438 | MS.gene33484:intron | 30.0% |
| !! | GCCATTTGTTAAGACATTTT+TGG | + | chr4.3:83177279-83177298 | MS.gene33484:CDS | 30.0% |
| !! | TTGAGTTGAGTTGGATTATA+GGG | + | chr4.3:83179420-83179439 | MS.gene33484:intron | 30.0% |
| !! | TTTTTGCAGAATTAACGGAT+AGG | + | chr4.3:83181071-83181090 | MS.gene33484:CDS | 30.0% |
| !!! | ACGAAGCAAAGTTTGTTTTA+TGG | + | chr4.3:83181115-83181134 | MS.gene33484:CDS | 30.0% |
| !!! | CAAGCAATTTTTTCAGGTAA+AGG | - | chr4.3:83180716-83180735 | None:intergenic | 30.0% |
| !!! | GATTAATGTTTTGATTGCCA+AGG | - | chr4.3:83177098-83177117 | None:intergenic | 30.0% |
| !!! | TGACTTTTCTGAAACAATTC+AGG | + | chr4.3:83178548-83178567 | MS.gene33484:intron | 30.0% |
| !!! | TTGTACCAAGCAATTTTTTC+AGG | - | chr4.3:83180722-83180741 | None:intergenic | 30.0% |
| AAACCACCGATATAACTTCA+TGG | + | chr4.3:83180083-83180102 | MS.gene33484:intron | 35.0% | |
| AAATGGACCATGGTTTGAAT+TGG | - | chr4.3:83179119-83179138 | None:intergenic | 35.0% | |
| AACTGATAATTTCCACATGG+AGG | + | chr4.3:83180060-83180079 | MS.gene33484:intron | 35.0% | |
| AATGGACCATGGTTTGAATT+GGG | - | chr4.3:83179118-83179137 | None:intergenic | 35.0% | |
| ACAAGGATTGTGCTTTCTTA+TGG | - | chr4.3:83179725-83179744 | None:intergenic | 35.0% | |
| AGGTACGTGAAATATACGAA+AGG | - | chr4.3:83177061-83177080 | None:intergenic | 35.0% | |
| ATATTCAAAGGGTTCTTGGA+GGG | + | chr4.3:83181281-83181300 | MS.gene33484:CDS | 35.0% | |
| ATGAAGAAGTGACACATACA+CGG | + | chr4.3:83179192-83179211 | MS.gene33484:intron | 35.0% | |
| CAAGAAAAGGAAGGATGAAA+TGG | - | chr4.3:83178353-83178372 | None:intergenic | 35.0% | |
| CACAATAACTAAGCTCTCTT+TGG | + | chr4.3:83178077-83178096 | MS.gene33484:intron | 35.0% | |
| CTATCTTTACTAGCTCGTAT+TGG | + | chr4.3:83179089-83179108 | MS.gene33484:intron | 35.0% | |
| GAAATATACGAAAGGGACTA+AGG | - | chr4.3:83177053-83177072 | None:intergenic | 35.0% | |
| GAGAACAAAAAAATGGACCA+TGG | - | chr4.3:83179129-83179148 | None:intergenic | 35.0% | |
| GAGGCAGTTATGAAAGAATT+TGG | + | chr4.3:83177403-83177422 | MS.gene33484:CDS | 35.0% | |
| GAGTAACAATTTGCCTGATT+TGG | + | chr4.3:83177426-83177445 | MS.gene33484:CDS | 35.0% | |
| GATAAGTATGCTATTCTTGC+AGG | + | chr4.3:83181340-83181359 | MS.gene33484:CDS | 35.0% | |
| GCACTAAACCTCAATAGAAA+CGG | - | chr4.3:83181049-83181068 | None:intergenic | 35.0% | |
| GCGCACATACACATATATAT+GGG | - | chr4.3:83178764-83178783 | None:intergenic | 35.0% | |
| GGTACGTGAAATATACGAAA+GGG | - | chr4.3:83177060-83177079 | None:intergenic | 35.0% | |
| GGTCTGTTTGAGAGTTTAAA+AGG | - | chr4.3:83178388-83178407 | None:intergenic | 35.0% | |
| GGTTGGACATGAGAAATTTA+TGG | - | chr4.3:83179624-83179643 | None:intergenic | 35.0% | |
| GTGCTACATTTGAAAATTGG+TGG | - | chr4.3:83176899-83176918 | None:intergenic | 35.0% | |
| TATATTCAAAGGGTTCTTGG+AGG | + | chr4.3:83181280-83181299 | MS.gene33484:CDS | 35.0% | |
| TGACTTCATGTCTATTTGCA+AGG | + | chr4.3:83177474-83177493 | MS.gene33484:CDS | 35.0% | |
| TGCGCACATACACATATATA+TGG | - | chr4.3:83178765-83178784 | None:intergenic | 35.0% | |
| TTAATCTTTGTCACATTCGC+GGG | + | chr4.3:83177112-83177131 | MS.gene33484:CDS | 35.0% | |
| TTGAAAATTGGTGGGAAAAG+TGG | - | chr4.3:83176890-83176909 | None:intergenic | 35.0% | |
| TTGCACTCTTAACCTTCTTA+TGG | + | chr4.3:83180642-83180661 | MS.gene33484:CDS | 35.0% | |
| TTTATGTGGTACAAGCTGTA+CGG | - | chr4.3:83179676-83179695 | None:intergenic | 35.0% | |
| TTTCTTGAATCAGTTGCCTT+TGG | + | chr4.3:83181213-83181232 | MS.gene33484:CDS | 35.0% | |
| ! | AAGGTTAAGAGTGCAAATAG+AGG | - | chr4.3:83180638-83180657 | None:intergenic | 35.0% |
| ! | AGAAGCTTGTTTCTTGGTAA+TGG | - | chr4.3:83180569-83180588 | None:intergenic | 35.0% |
| ! | AGGTTAAGAGTGCAAATAGA+GGG | - | chr4.3:83180637-83180656 | None:intergenic | 35.0% |
| ! | ATTGGTTTACTCTGTTGTAC+CGG | - | chr4.3:83179309-83179328 | None:intergenic | 35.0% |
| ! | CTGGATCTAAAACTGTTCTA+TGG | - | chr4.3:83180835-83180854 | None:intergenic | 35.0% |
| ! | GAAGCTTGTTTCTTGGTAAT+GGG | - | chr4.3:83180568-83180587 | None:intergenic | 35.0% |
| ! | TTCGTGTATAATTTTTCCGG+TGG | + | chr4.3:83179024-83179043 | MS.gene33484:intron | 35.0% |
| !! | ACTAGTCAATTGAGTTGAGT+TGG | + | chr4.3:83179411-83179430 | MS.gene33484:intron | 35.0% |
| !! | ATACTGGAGGATATTTTGGA+TGG | - | chr4.3:83178237-83178256 | None:intergenic | 35.0% |
| !! | GACATTTTTGGGAGTAGATA+AGG | + | chr4.3:83177291-83177310 | MS.gene33484:CDS | 35.0% |
| !! | GAGGATATTTTGGATGGTTT+GGG | - | chr4.3:83178231-83178250 | None:intergenic | 35.0% |
| !! | GTTTTAGATCCAGTTGTTAC+AGG | + | chr4.3:83180842-83180861 | MS.gene33484:CDS | 35.0% |
| !! | TGGAAAGTGTTCAATTCGTT+CGG | + | chr4.3:83177214-83177233 | MS.gene33484:CDS | 35.0% |
| !! | TGTATGTGTCACTTCTTCAT+AGG | - | chr4.3:83179192-83179211 | None:intergenic | 35.0% |
| !! | TTCAATCAAAAGTATCGTGC+CGG | + | chr4.3:83179287-83179306 | MS.gene33484:intron | 35.0% |
| !!! | AACACCACTTTGACCTTTTT+TGG | - | chr4.3:83180798-83180817 | None:intergenic | 35.0% |
| !!! | ACACCACTTTGACCTTTTTT+GGG | - | chr4.3:83180797-83180816 | None:intergenic | 35.0% |
| !!! | GCCCCTAATTTTTTGATGTT+GGG | + | chr4.3:83178933-83178952 | MS.gene33484:intron | 35.0% |
| AAGGGAAAGAGATAGAGATG+CGG | + | chr4.3:83180955-83180974 | MS.gene33484:CDS | 40.0% | |
| AAGTCTAGGGGAATATCACA+AGG | - | chr4.3:83179742-83179761 | None:intergenic | 40.0% | |
| AATGCAACTCCTGTAACAAC+TGG | - | chr4.3:83180854-83180873 | None:intergenic | 40.0% | |
| AATTGGTGGGAAAAGTGGAA+AGG | - | chr4.3:83176885-83176904 | None:intergenic | 40.0% | |
| ACCTTCTTATGGATGCCAAT+TGG | + | chr4.3:83180653-83180672 | MS.gene33484:CDS | 40.0% | |
| AGATAGATCAAACCAAACCG+TGG | + | chr4.3:83176922-83176941 | MS.gene33484:CDS | 40.0% | |
| ATAGATGATTTCGAGAGCAG+AGG | - | chr4.3:83178325-83178344 | None:intergenic | 40.0% | |
| ATGGACCATGGTTTGAATTG+GGG | - | chr4.3:83179117-83179136 | None:intergenic | 40.0% | |
| CACATTACAGGAAGGATACA+TGG | + | chr4.3:83180523-83180542 | MS.gene33484:intron | 40.0% | |
| CATGTTCCATGTGTAACAAG+AGG | - | chr4.3:83177658-83177677 | None:intergenic | 40.0% | |
| CCAATCACATCTCAACATAG+TGG | + | chr4.3:83179504-83179523 | MS.gene33484:intron | 40.0% | |
| CCACTATGTTGAGATGTGAT+TGG | - | chr4.3:83179507-83179526 | None:intergenic | 40.0% | |
| CTAGATCCTCTTGTTACACA+TGG | + | chr4.3:83177649-83177668 | MS.gene33484:intron | 40.0% | |
| GACTCTAGTATGAACACTTC+AGG | - | chr4.3:83178409-83178428 | None:intergenic | 40.0% | |
| GAGAGCTTTCAAGAAAAGGA+AGG | - | chr4.3:83178362-83178381 | None:intergenic | 40.0% | |
| GATGGTTACAAAAACAGGGA+GGG | + | chr4.3:83177330-83177349 | MS.gene33484:CDS | 40.0% | |
| GTAGAGAACCGTTTCTATTG+AGG | + | chr4.3:83181038-83181057 | MS.gene33484:CDS | 40.0% | |
| TAATCTTTGTCACATTCGCG+GGG | + | chr4.3:83177113-83177132 | MS.gene33484:CDS | 40.0% | |
| TAGATGATTTCGAGAGCAGA+GGG | - | chr4.3:83178324-83178343 | None:intergenic | 40.0% | |
| TCCAATTGGCATCCATAAGA+AGG | - | chr4.3:83180657-83180676 | None:intergenic | 40.0% | |
| TGATGGTTACAAAAACAGGG+AGG | + | chr4.3:83177329-83177348 | MS.gene33484:CDS | 40.0% | |
| TGTGGGCCATGAAGTTATAT+CGG | - | chr4.3:83180092-83180111 | None:intergenic | 40.0% | |
| TTGAACACTTTCCATGTCTC+TGG | - | chr4.3:83177208-83177227 | None:intergenic | 40.0% | |
| ! | AAGACGTGGAGATTGTTTCT+CGG | + | chr4.3:83177146-83177165 | MS.gene33484:CDS | 40.0% |
| ! | AGGTGACTTAGTGATTTGTC+CGG | + | chr4.3:83181003-83181022 | MS.gene33484:CDS | 40.0% |
| ! | CAGGGACTTTTTGTTGAGTA+AGG | + | chr4.3:83179815-83179834 | MS.gene33484:intron | 40.0% |
| ! | GGTTAAGAGTGCAAATAGAG+GGG | - | chr4.3:83180636-83180655 | None:intergenic | 40.0% |
| ! | GTGATCTCATAAGTTGGCAT+AGG | - | chr4.3:83181193-83181212 | None:intergenic | 40.0% |
| ! | TGTTGGTGAACACAAGAAAG+AGG | + | chr4.3:83177384-83177403 | MS.gene33484:CDS | 40.0% |
| ! | TTTGGATGGTTTGGGAGATT+CGG | - | chr4.3:83178223-83178242 | None:intergenic | 40.0% |
| !! | AAGGGGGTTTTATATCTTGG+AGG | + | chr4.3:83178279-83178298 | MS.gene33484:intron | 40.0% |
| !! | AATTTGCCTGATTTGGGACT+GGG | + | chr4.3:83177433-83177452 | MS.gene33484:CDS | 40.0% |
| !! | ATGTGTCACTTCTTCATAGG+TGG | - | chr4.3:83179189-83179208 | None:intergenic | 40.0% |
| !! | GGAAAGTGTTCAATTCGTTC+GGG | + | chr4.3:83177215-83177234 | MS.gene33484:CDS | 40.0% |
| !! | GGAGGATATTTTGGATGGTT+TGG | - | chr4.3:83178232-83178251 | None:intergenic | 40.0% |
| !! | GGCACGATACTTTTGATTGA+AGG | - | chr4.3:83179288-83179307 | None:intergenic | 40.0% |
| !! | TCTTGGTAATGGGTCACATT+TGG | - | chr4.3:83180558-83180577 | None:intergenic | 40.0% |
| !!! | CAAATAGAGGGGTTGGTTTT+TGG | - | chr4.3:83180625-83180644 | None:intergenic | 40.0% |
| !!! | GGCCCCTAATTTTTTGATGT+TGG | + | chr4.3:83178932-83178951 | MS.gene33484:intron | 40.0% |
| !!! | TGTTTTGATTGCCAAGGTCT+CGG | - | chr4.3:83177092-83177111 | None:intergenic | 40.0% |
| AAAAGCCGTTGCGCTTTCAA+GGG | + | chr4.3:83180937-83180956 | MS.gene33484:CDS | 45.0% | |
| AAAGGAAGGGGAGAACTTTG+GGG | + | chr4.3:83178113-83178132 | MS.gene33484:intron | 45.0% | |
| AAGGAACCAGGAGTTCTTGT+TGG | + | chr4.3:83177367-83177386 | MS.gene33484:CDS | 45.0% | |
| AATGGCTCAACCATCAACCT+TGG | - | chr4.3:83177265-83177284 | None:intergenic | 45.0% | |
| AATGGGTCACATTTGGTCCT+TGG | - | chr4.3:83180551-83180570 | None:intergenic | 45.0% | |
| AGGAAGGATACATGGTACCA+AGG | + | chr4.3:83180531-83180550 | MS.gene33484:intron | 45.0% | |
| CATGGCCCACAAAACAGTTA+AGG | + | chr4.3:83180101-83180120 | MS.gene33484:intron | 45.0% | |
| CCACCCAAAAAAGGTCAAAG+TGG | + | chr4.3:83180791-83180810 | MS.gene33484:CDS | 45.0% | |
| CCACTGCAAGTCAATTCCAA+AGG | - | chr4.3:83181232-83181251 | None:intergenic | 45.0% | |
| CGGGAAACGATACATTGTCA+CGG | + | chr4.3:83177234-83177253 | MS.gene33484:CDS | 45.0% | |
| GAAAGGAAGGGGAGAACTTT+GGG | + | chr4.3:83178112-83178131 | MS.gene33484:intron | 45.0% | |
| GCTATTCTTGCAGGAACAGA+TGG | + | chr4.3:83181349-83181368 | MS.gene33484:CDS | 45.0% | |
| GCTTCGTATTAATCGCGACA+GGG | - | chr4.3:83181102-83181121 | None:intergenic | 45.0% | |
| GGGAGAGAGCTTTCAAGAAA+AGG | - | chr4.3:83178366-83178385 | None:intergenic | 45.0% | |
| TAAAAGCCGTTGCGCTTTCA+AGG | + | chr4.3:83180936-83180955 | MS.gene33484:CDS | 45.0% | |
| TCTCTACATGTCGTTCCTTC+CGG | - | chr4.3:83181025-83181044 | None:intergenic | 45.0% | |
| TGCTTCGTATTAATCGCGAC+AGG | - | chr4.3:83181103-83181122 | None:intergenic | 45.0% | |
| TGGACCATGGTTTGAATTGG+GGG | - | chr4.3:83179116-83179135 | None:intergenic | 45.0% | |
| TGTTCACCAACAAGAACTCC+TGG | - | chr4.3:83177376-83177395 | None:intergenic | 45.0% | |
| TTTGGGAGTAGATAAGGTGC+TGG | + | chr4.3:83177297-83177316 | MS.gene33484:CDS | 45.0% | |
| ! | AAGAGTGCAAATAGAGGGGT+TGG | - | chr4.3:83180632-83180651 | None:intergenic | 45.0% |
| ! | GACTTAGTGATTTGTCCGGA+AGG | + | chr4.3:83181007-83181026 | MS.gene33484:CDS | 45.0% |
| ! | GGGCTTAGAAGCTTGTTTCT+TGG | - | chr4.3:83180575-83180594 | None:intergenic | 45.0% |
| ! | TCTTTCCCTTGAAAGCGCAA+CGG | - | chr4.3:83180945-83180964 | None:intergenic | 45.0% |
| ! | TTCGAGAGCAGAGGGTTTTT+GGG | - | chr4.3:83178316-83178335 | None:intergenic | 45.0% |
| ! | TTGGGAGTAGATAAGGTGCT+GGG | + | chr4.3:83177298-83177317 | MS.gene33484:CDS | 45.0% |
| ! | TTTCGAGAGCAGAGGGTTTT+TGG | - | chr4.3:83178317-83178336 | None:intergenic | 45.0% |
| !! | AGTGGGTTTGTTAAGGAACC+AGG | + | chr4.3:83177355-83177374 | MS.gene33484:CDS | 45.0% |
| !! | CAATTTGCCTGATTTGGGAC+TGG | + | chr4.3:83177432-83177451 | MS.gene33484:CDS | 45.0% |
| !! | CCTTTGGAATTGACTTGCAG+TGG | + | chr4.3:83181229-83181248 | MS.gene33484:CDS | 45.0% |
| !! | GAAAGCGCAACGGCTTTTAT+AGG | - | chr4.3:83180935-83180954 | None:intergenic | 45.0% |
| !! | TGGAATTGACTTGCAGTGGA+GGG | + | chr4.3:83181233-83181252 | MS.gene33484:CDS | 45.0% |
| !! | TTGGAATTGACTTGCAGTGG+AGG | + | chr4.3:83181232-83181251 | MS.gene33484:CDS | 45.0% |
| !!! | CCACTTTGACCTTTTTTGGG+TGG | - | chr4.3:83180794-83180813 | None:intergenic | 45.0% |
| !!! | CTTTGACCTTTTTTGGGTGG+TGG | - | chr4.3:83180791-83180810 | None:intergenic | 45.0% |
| !!! | TTTTATGGAACATCGGCTCG+CGG | + | chr4.3:83181130-83181149 | MS.gene33484:CDS | 45.0% |
| !! | ATAAAATTTAATTACATTTA+TGG | + | chr4.3:83179875-83179894 | MS.gene33484:intron | 5.0% |
| !!! | TTTTCAAAAAAAAAATATAT+TGG | + | chr4.3:83177847-83177866 | MS.gene33484:intron | 5.0% |
| AAAGACAGATGGAGCAGACC+AGG | - | chr4.3:83179067-83179086 | None:intergenic | 50.0% | |
| AAGACAGATGGAGCAGACCA+GGG | - | chr4.3:83179066-83179085 | None:intergenic | 50.0% | |
| ACAAAAACAGGGAGGGCAAG+TGG | + | chr4.3:83177337-83177356 | MS.gene33484:CDS | 50.0% | |
| AGTGCGACGAGCATGTAGTA+TGG | - | chr4.3:83176992-83177011 | None:intergenic | 50.0% | |
| CAAAAACAGGGAGGGCAAGT+GGG | + | chr4.3:83177338-83177357 | MS.gene33484:CDS | 50.0% | |
| CCAAGGTCTCGGAGACAAAT+AGG | - | chr4.3:83177081-83177100 | None:intergenic | 50.0% | |
| CCTATTTGTCTCCGAGACCT+TGG | + | chr4.3:83177078-83177097 | MS.gene33484:CDS | 50.0% | |
| GGAAAGGAAGGGGAGAACTT+TGG | + | chr4.3:83178111-83178130 | MS.gene33484:intron | 50.0% | |
| GGGCCATGAAGTTATATCGG+TGG | - | chr4.3:83180089-83180108 | None:intergenic | 50.0% | |
| GGGGCTAAGGATAAAAGACG+TGG | + | chr4.3:83177132-83177151 | MS.gene33484:CDS | 50.0% | |
| TATCGGTGGTTTCCTCCATG+TGG | - | chr4.3:83180075-83180094 | None:intergenic | 50.0% | |
| TGGTCCCCCAATTCAAACCA+TGG | + | chr4.3:83179109-83179128 | MS.gene33484:intron | 50.0% | |
| TTTCTCGGTCAGTGTTGCCT+AGG | + | chr4.3:83177161-83177180 | MS.gene33484:CDS | 50.0% | |
| ! | ACATTGTCACGGCTAGTCCA+AGG | + | chr4.3:83177245-83177264 | MS.gene33484:CDS | 50.0% |
| ! | TCGAGAGCAGAGGGTTTTTG+GGG | - | chr4.3:83178315-83178334 | None:intergenic | 50.0% |
| !! | GAGGGCAAGTGGGTTTGTTA+AGG | + | chr4.3:83177348-83177367 | MS.gene33484:CDS | 50.0% |
| !! | TGGGAGTAGATAAGGTGCTG+GGG | + | chr4.3:83177299-83177318 | MS.gene33484:CDS | 50.0% |
| !!! | ACCAGGGGAGCAGTTTTGTT+AGG | - | chr4.3:83179050-83179069 | None:intergenic | 50.0% |
| !!! | GAGCAGTTTTGTTAGGCCAC+CGG | - | chr4.3:83179043-83179062 | None:intergenic | 50.0% |
| !!! | TGACCTTTTTTGGGTGGTGG+TGG | - | chr4.3:83180788-83180807 | None:intergenic | 50.0% |
| ACGTCCTCGGCATAGAACCT+AGG | - | chr4.3:83177181-83177200 | None:intergenic | 55.0% | |
| AGACAGATGGAGCAGACCAG+GGG | - | chr4.3:83179065-83179084 | None:intergenic | 55.0% | |
| AGGACGTGCATCCAGAGACA+TGG | + | chr4.3:83177194-83177213 | MS.gene33484:CDS | 55.0% | |
| AGGGTTCTTGGAGGGACTCT+TGG | + | chr4.3:83181289-83181308 | MS.gene33484:CDS | 55.0% | |
| AGTCTCGAGGGGAAAGGAAG+GGG | + | chr4.3:83178101-83178120 | MS.gene33484:intron | 55.0% | |
| ATGCACTTCGCGACACGAGA+AGG | - | chr4.3:83176967-83176986 | None:intergenic | 55.0% | |
| CCTCCACCACCACCCAAAAA+AGG | + | chr4.3:83180782-83180801 | MS.gene33484:CDS | 55.0% | |
| CTGTCTCCCAGTCCCAAATC+AGG | - | chr4.3:83177442-83177461 | None:intergenic | 55.0% | |
| GAGTCTCGAGGGGAAAGGAA+GGG | + | chr4.3:83178100-83178119 | MS.gene33484:intron | 55.0% | |
| GCCTAACAAAACTGCTCCCC+TGG | + | chr4.3:83179046-83179065 | MS.gene33484:intron | 55.0% | |
| GGCTCGCGGACACAAATTGT+TGG | + | chr4.3:83181144-83181163 | MS.gene33484:CDS | 55.0% | |
| GTGGTACAAGCTGTACGGCT+TGG | - | chr4.3:83179671-83179690 | None:intergenic | 55.0% | |
| GTTGCCTAGGTTCTATGCCG+AGG | + | chr4.3:83177174-83177193 | MS.gene33484:CDS | 55.0% | |
| TGCACTTCGCGACACGAGAA+GGG | - | chr4.3:83176966-83176985 | None:intergenic | 55.0% | |
| TGTCTCTGGATGCACGTCCT+CGG | - | chr4.3:83177194-83177213 | None:intergenic | 55.0% | |
| TTGTCACATTCGCGGGGCTA+AGG | + | chr4.3:83177119-83177138 | MS.gene33484:CDS | 55.0% | |
| TTTGGGAGTCTCGAGGGGAA+AGG | + | chr4.3:83178095-83178114 | MS.gene33484:intron | 55.0% | |
| ! | AGCTCTCTTTGGGAGTCTCG+AGG | + | chr4.3:83178088-83178107 | MS.gene33484:intron | 55.0% |
| ! | CACGGCTAGTCCAAGGTTGA+TGG | + | chr4.3:83177252-83177271 | MS.gene33484:CDS | 55.0% |
| ! | CTCTCTTTGGGAGTCTCGAG+GGG | + | chr4.3:83178090-83178109 | MS.gene33484:intron | 55.0% |
| ! | GCTCTCTTTGGGAGTCTCGA+GGG | + | chr4.3:83178089-83178108 | MS.gene33484:intron | 55.0% |
| ! | GGTGCTGGGGACTGAATTGA+TGG | + | chr4.3:83177312-83177331 | MS.gene33484:CDS | 55.0% |
| !! | ACACGAGAAGGGTGCCATCT+AGG | - | chr4.3:83176955-83176974 | None:intergenic | 55.0% |
| !! | CGAGAGCAGAGGGTTTTTGG+GGG | - | chr4.3:83178314-83178333 | None:intergenic | 55.0% |
| !! | GAGAAGGGTGCCATCTAGGT+CGG | - | chr4.3:83176951-83176970 | None:intergenic | 55.0% |
| !! | GAGAGCAGAGGGTTTTTGGG+GGG | - | chr4.3:83178313-83178332 | None:intergenic | 55.0% |
| !!! | CCTTTTTTGGGTGGTGGTGG+AGG | - | chr4.3:83180785-83180804 | None:intergenic | 55.0% |
| ACCGTGGCATCCGACCTAGA+TGG | + | chr4.3:83176938-83176957 | MS.gene33484:CDS | 60.0% | |
| ATGCTCGTCGCACTCGAAGC+TGG | + | chr4.3:83176998-83177017 | MS.gene33484:CDS | 60.0% | |
| CTAGGTCGGATGCCACGGTT+TGG | - | chr4.3:83176937-83176956 | None:intergenic | 60.0% | |
| GCCATCTAGGTCGGATGCCA+CGG | - | chr4.3:83176942-83176961 | None:intergenic | 60.0% | |
| GGAGTCTCGAGGGGAAAGGA+AGG | + | chr4.3:83178099-83178118 | MS.gene33484:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 83176875 | 83181399 | 83176875 | ID=MS.gene33484 |
| chr4.3 | mRNA | 83176875 | 83181399 | 83176875 | ID=MS.gene33484.t1;Parent=MS.gene33484 |
| chr4.3 | exon | 83176875 | 83177495 | 83176875 | ID=MS.gene33484.t1.exon1;Parent=MS.gene33484.t1 |
| chr4.3 | CDS | 83176875 | 83177495 | 83176875 | ID=cds.MS.gene33484.t1;Parent=MS.gene33484.t1 |
| chr4.3 | exon | 83180533 | 83181399 | 83180533 | ID=MS.gene33484.t1.exon2;Parent=MS.gene33484.t1 |
| chr4.3 | CDS | 83180533 | 83181399 | 83180533 | ID=cds.MS.gene33484.t1;Parent=MS.gene33484.t1 |
| Gene Sequence |
| Protein sequence |
