AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052760.t1 MTR_4g015080 68.272 353 27 4 1 268 120 472 9.73e-159 454
MS.gene052760.t1 MTR_7g067010 60.907 353 53 6 1 268 110 462 9.07e-138 400
MS.gene052760.t1 MTR_3g112470 37.677 353 128 8 1 268 109 454 1.38e-66 217
MS.gene052760.t1 MTR_3g112460 36.827 353 131 8 1 268 109 454 2.53e-63 209
MS.gene052760.t1 MTR_3g462710 59.172 169 42 2 127 268 187 355 3.10e-63 206
MS.gene052760.t1 MTR_3g462710 67.742 124 39 1 1 123 1 124 9.94e-48 165
MS.gene052760.t1 MTR_3g462710 59.172 169 42 2 127 268 296 464 3.09e-62 206
MS.gene052760.t1 MTR_3g462710 67.742 124 39 1 1 123 110 233 6.31e-47 165
MS.gene052760.t1 MTR_5g055000 34.270 356 145 7 1 267 104 459 2.27e-57 193
MS.gene052760.t1 MTR_7g098200 33.803 355 147 7 1 273 115 463 5.10e-55 187
MS.gene052760.t1 MTR_3g005010 34.906 318 133 6 24 267 126 443 4.73e-54 184
MS.gene052760.t1 MTR_7g098200 32.033 359 158 6 1 273 1 359 6.43e-54 182
MS.gene052760.t1 MTR_7g098200 32.033 359 158 6 1 273 115 473 7.10e-53 182
MS.gene052760.t1 MTR_4g033325 33.824 340 145 8 1 267 19 351 1.03e-52 178
MS.gene052760.t1 MTR_4g033375 32.945 343 147 6 1 267 118 453 1.09e-52 179
MS.gene052760.t1 MTR_4g033315 34.615 338 139 8 5 267 121 451 9.87e-52 178
MS.gene052760.t1 MTR_4g033310 34.615 338 139 8 5 267 121 451 9.87e-52 178
MS.gene052760.t1 MTR_7g098040 31.728 353 155 6 1 267 120 472 1.20e-51 179
MS.gene052760.t1 MTR_0294s0020 33.861 316 136 5 25 267 134 449 6.96e-51 176
MS.gene052760.t1 MTR_7g098230 32.055 365 150 7 1 273 112 470 1.27e-50 176
MS.gene052760.t1 MTR_4g033325 33.631 336 143 8 5 267 121 449 2.23e-50 174
MS.gene052760.t1 MTR_4g033385 33.236 343 146 7 1 267 17 352 5.50e-50 171
MS.gene052760.t1 MTR_4g033395 33.528 343 145 8 1 267 118 453 6.49e-50 172
MS.gene052760.t1 MTR_4g033325 33.544 316 137 6 25 267 10 325 7.04e-50 170
MS.gene052760.t1 MTR_7g098180 31.638 354 155 7 1 267 117 470 1.37e-49 173
MS.gene052760.t1 MTR_7g098220 31.476 359 160 6 1 273 72 430 8.01e-49 170
MS.gene052760.t1 MTR_8g087810 33.515 367 144 9 1 267 107 473 3.70e-48 169
MS.gene052760.t1 MTR_4g033330 33.956 321 136 7 22 267 132 451 5.17e-48 167
MS.gene052760.t1 MTR_7g098090 29.888 358 160 6 1 267 119 476 6.54e-48 168
MS.gene052760.t1 MTR_7g098160 29.494 356 165 5 1 270 119 474 4.55e-46 163
MS.gene052760.t1 MTR_1g116930 29.155 343 151 6 13 268 121 458 1.36e-44 159
MS.gene052760.t1 MTR_4g107580 30.659 349 146 8 15 267 125 473 2.20e-44 159
MS.gene052760.t1 MTR_2g005130 32.267 344 144 10 3 267 128 461 2.81e-44 158
MS.gene052760.t1 MTR_1g075440 31.844 358 150 9 1 268 114 467 4.27e-44 158
MS.gene052760.t1 MTR_7g010820 31.161 353 141 8 13 268 124 471 1.00e-43 157
MS.gene052760.t1 MTR_1g041875 31.476 359 153 7 1 273 115 466 2.43e-43 155
MS.gene052760.t1 MTR_7g111260 29.942 344 155 8 1 265 105 441 8.26e-43 154
MS.gene052760.t1 MTR_7g098220 31.507 365 152 8 1 273 116 474 1.14e-42 154
MS.gene052760.t1 MTR_3g100980 32.622 328 140 7 18 265 126 452 9.92e-42 151
MS.gene052760.t1 MTR_1g041885 31.198 359 154 9 1 273 68 419 1.02e-40 148
MS.gene052760.t1 MTR_4g098800 31.034 348 143 9 13 268 134 476 1.04e-40 149
MS.gene052760.t1 MTR_7g005930 29.697 330 142 7 23 268 147 470 1.62e-40 148
MS.gene052760.t1 MTR_4g098800 30.747 348 144 9 13 268 199 541 1.66e-40 149
MS.gene052760.t1 MTR_5g085850 33.051 354 143 12 1 268 116 461 1.67e-40 148
MS.gene052760.t1 MTR_4g033310 33.562 292 140 7 5 267 121 387 1.74e-40 147
MS.gene052760.t1 MTR_7g013270 29.003 331 145 8 23 268 202 527 1.87e-40 148
MS.gene052760.t1 MTR_5g014150 28.829 333 147 6 25 268 158 489 2.98e-40 147
MS.gene052760.t1 MTR_1g009200 30.141 355 160 8 1 267 113 467 3.48e-40 147
MS.gene052760.t1 MTR_7g065080 28.693 352 159 6 1 268 30 373 5.46e-40 145
MS.gene052760.t1 MTR_7g065080 28.693 352 159 6 1 268 117 460 1.49e-39 145
MS.gene052760.t1 MTR_4g114340 33.803 355 142 11 2 268 111 460 1.54e-39 145
MS.gene052760.t1 MTR_4g123537 31.214 346 148 12 2 265 128 465 2.61e-36 137
MS.gene052760.t1 MTR_8g038880 38.418 177 81 2 125 273 281 457 8.28e-36 135
MS.gene052760.t1 MTR_8g038880 46.377 69 37 0 32 100 122 190 7.93e-14 71.6
MS.gene052760.t1 MTR_3g014790 41.573 178 74 2 126 273 277 454 1.19e-35 134
MS.gene052760.t1 MTR_3g014790 41.758 91 53 0 33 123 120 210 1.08e-14 74.3
MS.gene052760.t1 MTR_2g101650 28.771 358 163 11 1 267 110 466 1.48e-35 134
MS.gene052760.t1 MTR_1g085090 29.023 348 153 11 1 265 105 441 4.31e-35 133
MS.gene052760.t1 MTR_4g107610 27.887 355 162 9 4 267 120 471 5.91e-33 127
MS.gene052760.t1 MTR_1g009170 29.553 291 129 7 38 267 9 284 9.84e-32 121
MS.gene052760.t1 MTR_8g087780 40.571 175 71 4 126 267 298 472 3.43e-31 122
MS.gene052760.t1 MTR_8g087780 40.945 127 69 3 1 121 107 233 7.80e-20 89.4
MS.gene052760.t1 MTR_1g026740 26.891 357 168 8 1 267 103 456 2.81e-30 119
MS.gene052760.t1 MTR_7g088825 39.429 175 75 4 123 267 293 466 6.28e-30 119
MS.gene052760.t1 MTR_7g088825 42.276 123 68 2 4 123 111 233 7.44e-25 104
MS.gene052760.t1 MTR_8g469480 37.791 172 78 3 125 268 315 485 6.72e-30 118
MS.gene052760.t1 MTR_8g469480 41.414 99 58 0 25 123 155 253 1.29e-18 85.9
MS.gene052760.t1 MTR_5g038060 40.351 171 73 3 126 268 309 478 1.07e-29 118
MS.gene052760.t1 MTR_5g038060 39.231 130 72 3 1 123 117 246 1.83e-21 94.4
MS.gene052760.t1 MTR_3g112450 54.955 111 46 2 1 107 109 219 3.85e-29 116
MS.gene052760.t1 MTR_3g112450 36.686 169 70 4 126 268 298 455 6.91e-27 110
MS.gene052760.t1 MTR_5g012290 37.791 172 77 4 126 268 303 473 4.63e-29 116
MS.gene052760.t1 MTR_5g012290 42.958 142 77 3 1 138 113 254 7.31e-22 95.5
MS.gene052760.t1 MTR_7g088790 38.068 176 76 5 123 267 300 473 2.40e-27 111
MS.gene052760.t1 MTR_7g088790 42.623 122 67 2 4 122 118 239 4.81e-23 99.0
MS.gene052760.t1 MTR_1g041815 47.244 127 62 2 1 122 113 239 4.09e-27 110
MS.gene052760.t1 MTR_1g041815 32.353 170 82 4 126 268 302 465 5.09e-11 63.2
MS.gene052760.t1 MTR_3g072300 39.437 142 83 2 1 141 110 249 5.20e-27 110
MS.gene052760.t1 MTR_3g072300 48.182 110 56 1 162 270 355 464 7.01e-25 104
MS.gene052760.t1 MTR_8g469310 45.161 124 66 2 1 122 113 236 1.01e-26 109
MS.gene052760.t1 MTR_8g469310 43.089 123 67 2 148 268 350 471 2.27e-23 99.8
MS.gene052760.t1 MTR_7g088820 42.400 125 69 2 1 122 1 125 1.34e-26 108
MS.gene052760.t1 MTR_7g088820 35.260 173 81 4 123 265 186 357 6.82e-25 103
MS.gene052760.t1 MTR_4g101380 36.207 174 79 4 126 268 304 476 1.49e-26 108
MS.gene052760.t1 MTR_4g101380 41.406 128 70 2 1 123 113 240 1.22e-18 85.9
MS.gene052760.t1 MTR_8g103233 27.507 349 165 13 15 276 118 465 1.59e-26 108
MS.gene052760.t1 MTR_7g088820 42.400 125 69 2 1 122 111 235 2.95e-26 108
MS.gene052760.t1 MTR_7g088820 35.260 173 81 4 123 265 296 467 7.23e-25 104
MS.gene052760.t1 MTR_7g088820 42.400 125 69 2 1 122 49 173 3.24e-26 107
MS.gene052760.t1 MTR_7g088820 35.260 173 81 4 123 265 234 405 6.39e-25 104
MS.gene052760.t1 MTR_3g069500 44.262 122 66 2 1 121 121 241 1.65e-25 105
MS.gene052760.t1 MTR_3g069500 36.364 176 77 4 126 275 303 469 2.64e-23 99.8
MS.gene052760.t1 MTR_4g019580 34.911 169 80 4 127 268 306 471 2.10e-25 105
MS.gene052760.t1 MTR_4g019580 36.000 125 79 1 1 124 122 246 5.20e-19 87.0
MS.gene052760.t1 MTR_1g041835 44.361 133 69 2 1 128 113 245 2.98e-25 105
MS.gene052760.t1 MTR_1g041835 32.941 170 81 4 126 268 302 465 4.17e-12 66.6
MS.gene052760.t1 MTR_2g017750 35.593 177 79 4 126 267 311 487 6.17e-25 104
MS.gene052760.t1 MTR_2g017750 41.732 127 68 3 1 121 120 246 4.79e-24 102
MS.gene052760.t1 MTR_5g012270 32.057 209 116 5 1 205 115 301 1.13e-24 103
MS.gene052760.t1 MTR_5g012270 35.057 174 80 4 126 268 304 475 2.02e-24 102
MS.gene052760.t1 MTR_1g026770 24.786 351 172 9 6 267 106 453 3.47e-24 102
MS.gene052760.t1 MTR_5g038380 43.200 125 68 3 1 122 114 238 3.82e-24 102
MS.gene052760.t1 MTR_5g038380 41.509 106 60 1 163 268 371 474 4.53e-20 90.1
MS.gene052760.t1 MTR_7g098150 38.281 128 73 1 1 122 119 246 5.93e-24 101
MS.gene052760.t1 MTR_7g098150 34.810 158 70 3 126 256 309 460 2.61e-20 90.5
MS.gene052760.t1 MTR_6g008690 46.364 110 57 1 163 270 330 439 1.02e-23 100
MS.gene052760.t1 MTR_6g008690 34.831 89 50 1 42 122 127 215 2.52e-12 67.0
MS.gene052760.t1 MTR_7g098210 28.955 335 137 9 1 273 53 348 1.23e-23 100
MS.gene052760.t1 MTR_3g069440 43.220 118 65 2 5 121 123 239 1.92e-23 100
MS.gene052760.t1 MTR_3g069440 32.749 171 86 3 126 268 301 470 3.82e-21 93.2
MS.gene052760.t1 MTR_4g107510 36.464 181 71 5 126 267 309 484 2.16e-23 100
MS.gene052760.t1 MTR_4g107510 35.714 112 69 2 15 123 137 248 6.29e-20 89.7
MS.gene052760.t1 MTR_4g107670 43.750 128 66 3 1 123 108 234 2.55e-23 99.8
MS.gene052760.t1 MTR_4g107670 32.749 171 79 4 125 268 310 471 1.03e-20 92.0
MS.gene052760.t1 MTR_2g093180 25.562 356 156 10 13 273 119 460 2.82e-22 96.7
MS.gene052760.t1 MTR_3g100980 38.323 167 69 4 126 265 321 480 2.91e-22 96.7
MS.gene052760.t1 MTR_3g100980 38.889 108 65 1 18 124 126 233 8.67e-19 86.3
MS.gene052760.t1 MTR_3g069420 34.118 170 83 3 126 267 302 470 6.30e-22 95.5
MS.gene052760.t1 MTR_3g069420 41.803 122 69 2 1 121 120 240 7.91e-22 95.5
MS.gene052760.t1 MTR_7g006540 40.323 124 67 3 5 122 157 279 1.08e-21 95.1
MS.gene052760.t1 MTR_7g006540 35.057 174 77 5 126 268 343 511 1.32e-21 94.7
MS.gene052760.t1 MTR_1g042310 34.783 184 113 4 1 177 75 258 1.31e-21 94.7
MS.gene052760.t1 MTR_1g042310 30.286 175 90 4 126 273 264 433 2.27e-13 70.5
MS.gene052760.t1 MTR_1g042310 34.783 184 113 4 1 177 68 251 1.39e-21 94.7
MS.gene052760.t1 MTR_1g042310 30.286 175 90 4 126 273 257 426 2.13e-13 70.5
MS.gene052760.t1 MTR_1g042310 34.783 184 113 4 1 177 112 295 1.53e-21 94.4
MS.gene052760.t1 MTR_1g042310 30.286 175 90 4 126 273 301 470 2.38e-13 70.5
MS.gene052760.t1 MTR_5g038190 33.136 169 84 3 125 265 299 466 1.96e-21 94.4
MS.gene052760.t1 MTR_5g038190 33.588 131 78 3 1 123 110 239 1.73e-13 70.9
MS.gene052760.t1 MTR_8g469470 32.386 176 86 5 125 268 308 482 2.33e-21 94.0
MS.gene052760.t1 MTR_8g469470 40.217 92 55 0 32 123 156 247 1.87e-14 73.6
MS.gene052760.t1 MTR_4g107530 35.593 177 78 6 126 267 306 481 2.87e-21 93.6
MS.gene052760.t1 MTR_4g107530 38.318 107 65 1 18 123 140 246 5.62e-21 92.8
MS.gene052760.t1 MTR_1g057460 33.523 176 83 5 126 273 233 402 9.10e-20 89.0
MS.gene052760.t1 MTR_1g057460 37.903 124 68 5 1 122 59 175 8.25e-14 71.6
MS.gene052760.t1 MTR_1g057460 33.523 176 83 5 126 273 304 473 1.43e-19 88.6
MS.gene052760.t1 MTR_1g057460 37.903 124 68 5 1 122 130 246 5.33e-14 72.4
MS.gene052760.t1 MTR_2g101590 40.157 127 70 5 1 122 112 237 2.28e-19 88.2
MS.gene052760.t1 MTR_2g101590 29.050 179 95 5 126 272 295 473 2.30e-13 70.5
MS.gene052760.t1 MTR_2g101610 41.732 127 68 5 1 122 113 238 2.60e-19 88.2
MS.gene052760.t1 MTR_2g101610 29.050 179 95 5 126 272 296 474 2.20e-13 70.5
MS.gene052760.t1 MTR_7g064780 32.353 170 83 3 127 267 303 469 4.76e-18 84.3
MS.gene052760.t1 MTR_7g064780 31.720 186 104 6 1 183 112 277 7.75e-18 83.6
MS.gene052760.t1 MTR_2g101640 29.775 178 95 4 126 273 294 471 1.52e-17 82.8
MS.gene052760.t1 MTR_2g101640 36.220 127 75 5 1 122 109 234 2.96e-16 79.0
MS.gene052760.t1 MTR_7g064800 34.921 126 77 3 1 121 112 237 3.82e-17 81.6
MS.gene052760.t1 MTR_7g064800 32.749 171 81 4 127 267 305 471 2.24e-15 76.3
MS.gene052760.t1 MTR_4g011280 29.012 162 87 3 134 267 311 472 9.52e-17 80.5
MS.gene052760.t1 MTR_4g011280 36.207 116 68 5 1 111 118 232 7.03e-12 65.9
MS.gene052760.t1 MTR_3g065350 40.385 104 56 2 162 265 27 124 1.28e-16 75.9
MS.gene052760.t1 MTR_4g024930 42.308 104 56 2 171 273 361 461 3.94e-16 78.6
MS.gene052760.t1 MTR_0236s0050 32.386 176 85 5 126 273 233 402 1.09e-15 77.0
MS.gene052760.t1 MTR_0236s0050 37.903 124 68 5 1 122 59 175 7.31e-14 71.6
MS.gene052760.t1 MTR_2g093160 28.977 176 88 4 127 273 292 459 4.36e-15 75.5
MS.gene052760.t1 MTR_1g026750 36.975 119 69 4 7 122 110 225 2.53e-14 73.2
MS.gene052760.t1 MTR_1g026750 28.902 173 92 4 126 267 285 457 4.68e-13 69.3
MS.gene052760.t1 MTR_7g051880 36.538 104 60 2 1 104 111 208 1.59e-13 70.9
MS.gene052760.t1 MTR_2g101560 28.022 182 95 6 126 273 296 475 1.30e-12 68.2
MS.gene052760.t1 MTR_7g051830 32.231 121 76 2 1 121 111 225 2.90e-12 67.0
MS.gene052760.t1 MTR_2g093640 27.461 193 122 6 5 188 115 298 4.80e-12 66.2
MS.gene052760.t1 MTR_7g052600 34.615 104 62 2 1 104 111 208 6.84e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052760.t1 AT2G02020 44.062 320 126 7 1 268 128 446 7.31e-78 246
MS.gene052760.t1 AT2G02020 44.482 299 134 9 1 268 128 425 1.54e-70 226
MS.gene052760.t1 AT5G01180 63.529 170 35 2 126 268 295 464 9.99e-66 215
MS.gene052760.t1 AT5G01180 72.358 123 34 0 1 123 111 233 6.46e-56 189
MS.gene052760.t1 AT5G01180 63.529 170 35 2 126 268 295 464 9.99e-66 215
MS.gene052760.t1 AT5G01180 72.358 123 34 0 1 123 111 233 6.46e-56 189
MS.gene052760.t1 AT5G01180 63.529 170 35 2 126 268 295 464 9.99e-66 215
MS.gene052760.t1 AT5G01180 72.358 123 34 0 1 123 111 233 6.46e-56 189
MS.gene052760.t1 AT3G54140 58.235 170 44 2 126 268 295 464 2.10e-60 201
MS.gene052760.t1 AT3G54140 55.729 192 79 4 1 187 110 300 3.71e-60 200
MS.gene052760.t1 AT3G54140 58.235 170 44 2 126 268 295 464 2.10e-60 201
MS.gene052760.t1 AT3G54140 55.729 192 79 4 1 187 110 300 3.71e-60 200
MS.gene052760.t1 AT1G27040 32.479 351 153 8 1 268 81 430 1.36e-52 180
MS.gene052760.t1 AT1G27040 32.479 351 153 8 1 268 113 462 2.05e-52 180
MS.gene052760.t1 AT1G27040 32.479 351 153 8 1 268 109 458 2.82e-52 179
MS.gene052760.t1 AT5G46050 32.591 359 156 7 1 273 1 359 7.65e-49 168
MS.gene052760.t1 AT5G46040 34.463 354 146 8 1 268 113 466 5.04e-48 168
MS.gene052760.t1 AT1G72130 32.831 332 145 7 1 265 111 431 6.98e-48 167
MS.gene052760.t1 AT5G46050 32.591 359 156 7 1 273 113 471 8.16e-48 168
MS.gene052760.t1 AT3G54450 33.131 329 129 7 33 270 118 446 1.49e-47 167
MS.gene052760.t1 AT1G22540 34.024 338 151 7 1 267 116 452 1.62e-47 166
MS.gene052760.t1 AT1G72140 33.634 333 155 7 1 267 120 452 3.04e-47 166
MS.gene052760.t1 AT1G72130 33.115 305 132 5 28 265 14 313 6.55e-47 162
MS.gene052760.t1 AT1G72130 33.115 305 132 5 28 265 14 313 6.55e-47 162
MS.gene052760.t1 AT3G21670 32.768 354 143 10 3 268 117 463 3.46e-44 158
MS.gene052760.t1 AT2G37900 32.295 353 145 9 1 268 45 388 4.01e-44 156
MS.gene052760.t1 AT1G22570 29.651 344 163 4 4 268 84 427 3.75e-43 154
MS.gene052760.t1 AT1G22570 29.651 344 163 4 4 268 121 464 6.68e-43 154
MS.gene052760.t1 AT2G26690 33.913 345 136 10 11 268 75 414 1.13e-42 153
MS.gene052760.t1 AT2G26690 33.913 345 136 10 11 268 87 426 1.29e-42 153
MS.gene052760.t1 AT2G26690 33.913 345 136 10 11 268 120 459 2.15e-42 153
MS.gene052760.t1 AT4G21680 30.663 362 156 10 1 268 114 474 3.88e-41 150
MS.gene052760.t1 AT1G18880 28.529 340 153 7 24 273 133 472 7.33e-41 149
MS.gene052760.t1 AT1G32450 30.699 329 135 6 32 268 158 485 2.40e-40 148
MS.gene052760.t1 AT3G45650 29.379 354 161 11 1 272 108 454 3.73e-40 147
MS.gene052760.t1 AT3G45650 29.014 355 163 11 1 273 108 455 7.25e-40 146
MS.gene052760.t1 AT2G02040 61.290 124 46 2 1 122 127 250 3.19e-39 144
MS.gene052760.t1 AT2G02040 43.353 173 65 5 126 268 313 482 5.81e-37 138
MS.gene052760.t1 AT3G16180 29.086 361 162 9 1 267 109 469 1.43e-38 142
MS.gene052760.t1 AT1G62200 59.055 127 47 2 1 122 138 264 7.19e-38 140
MS.gene052760.t1 AT1G62200 39.655 174 70 4 126 272 327 492 1.11e-31 123
MS.gene052760.t1 AT1G62200 59.055 127 47 2 1 122 138 264 1.00e-37 140
MS.gene052760.t1 AT1G62200 39.655 174 70 4 126 272 356 521 1.88e-31 123
MS.gene052760.t1 AT1G62200 59.055 127 47 2 1 122 152 278 1.05e-37 140
MS.gene052760.t1 AT1G62200 39.655 174 70 4 126 272 370 535 1.52e-31 123
MS.gene052760.t1 AT5G19640 28.571 357 149 10 1 268 145 484 7.38e-37 138
MS.gene052760.t1 AT3G45660 27.042 355 170 9 1 273 107 454 3.54e-36 135
MS.gene052760.t1 AT3G45660 27.042 355 170 9 1 273 107 454 3.54e-36 135
MS.gene052760.t1 AT3G45660 27.042 355 170 9 1 273 128 475 4.14e-36 135
MS.gene052760.t1 AT5G14940 28.701 331 143 9 32 271 116 444 2.42e-35 133
MS.gene052760.t1 AT5G62680 26.630 368 173 9 3 273 131 498 4.00e-33 127
MS.gene052760.t1 AT1G69870 41.040 173 71 4 125 268 325 495 1.56e-32 126
MS.gene052760.t1 AT1G69870 36.800 125 74 3 4 123 140 264 9.99e-20 89.4
MS.gene052760.t1 AT3G47960 27.473 364 168 8 2 273 155 514 1.23e-31 124
MS.gene052760.t1 AT1G69850 46.875 128 66 2 3 128 113 240 9.42e-31 121
MS.gene052760.t1 AT1G69850 39.344 122 72 2 148 268 359 479 8.42e-22 95.5
MS.gene052760.t1 AT1G68570 39.535 172 74 3 126 267 266 437 2.88e-30 119
MS.gene052760.t1 AT1G68570 48.387 124 61 2 1 121 79 202 1.03e-22 97.8
MS.gene052760.t1 AT1G33440 29.462 353 149 13 3 267 126 466 4.07e-30 119
MS.gene052760.t1 AT1G68570 39.535 172 74 3 126 267 296 467 4.23e-30 119
MS.gene052760.t1 AT1G68570 48.387 124 61 2 1 121 109 232 9.30e-23 98.2
MS.gene052760.t1 AT3G45720 26.611 357 159 10 3 270 107 449 1.16e-29 117
MS.gene052760.t1 AT5G11570 26.923 312 182 8 1 280 99 396 1.43e-29 117
MS.gene052760.t1 AT2G40460 43.902 123 68 1 1 122 110 232 1.45e-27 112
MS.gene052760.t1 AT2G40460 35.465 172 75 4 126 270 296 458 9.93e-21 92.0
MS.gene052760.t1 AT1G72125 41.606 137 76 2 1 136 115 248 1.02e-24 103
MS.gene052760.t1 AT1G72125 38.889 108 64 1 163 268 350 457 1.11e-19 89.0
MS.gene052760.t1 AT1G59740 34.682 173 79 3 126 272 316 480 3.30e-24 102
MS.gene052760.t1 AT1G59740 38.168 131 76 3 3 128 129 259 1.47e-18 85.9
MS.gene052760.t1 AT3G45700 25.915 355 149 14 1 263 102 434 5.84e-24 101
MS.gene052760.t1 AT2G37900 45.082 122 65 2 1 121 124 244 3.75e-23 99.4
MS.gene052760.t1 AT2G37900 35.294 170 75 5 126 268 306 467 6.93e-22 95.5
MS.gene052760.t1 AT3G53960 34.302 172 82 5 126 268 305 474 6.60e-23 98.6
MS.gene052760.t1 AT3G53960 39.344 122 72 2 1 121 123 243 1.13e-18 86.3
MS.gene052760.t1 AT1G72120 43.519 108 59 1 163 268 346 453 2.21e-22 97.1
MS.gene052760.t1 AT1G72120 42.276 123 68 1 1 123 115 234 8.20e-22 95.5
MS.gene052760.t1 AT5G13400 32.386 176 87 4 126 272 344 516 4.02e-22 96.3
MS.gene052760.t1 AT5G13400 44.211 95 53 0 28 122 186 280 3.40e-20 90.5
MS.gene052760.t1 AT5G62730 48.913 92 47 0 32 123 103 194 4.66e-22 95.9
MS.gene052760.t1 AT5G62730 33.858 127 56 3 139 239 267 391 1.39e-14 73.9
MS.gene052760.t1 AT5G62730 48.913 92 47 0 32 123 162 253 4.84e-22 95.9
MS.gene052760.t1 AT5G62730 33.858 127 56 3 139 239 326 450 1.98e-14 73.6
MS.gene052760.t1 AT1G52190 41.860 129 68 4 1 122 107 235 7.03e-22 95.5
MS.gene052760.t1 AT1G52190 27.742 155 82 3 143 267 315 469 4.65e-17 81.3
MS.gene052760.t1 AT1G27080 34.940 166 65 6 126 260 246 399 6.04e-21 92.8
MS.gene052760.t1 AT1G27080 36.697 109 64 2 16 124 82 185 2.10e-18 85.1
MS.gene052760.t1 AT1G27080 34.940 166 65 6 126 260 288 441 6.19e-21 92.8
MS.gene052760.t1 AT1G27080 36.697 109 64 2 16 124 124 227 2.77e-18 85.1
MS.gene052760.t1 AT3G25260 25.588 340 162 12 3 271 109 428 1.48e-20 91.7
MS.gene052760.t1 AT1G12110 44.094 127 66 3 1 122 113 239 1.80e-20 91.3
MS.gene052760.t1 AT1G12110 30.857 175 92 4 126 273 305 477 3.73e-19 87.4
MS.gene052760.t1 AT5G28470 35.417 144 88 4 1 139 103 246 2.59e-20 90.9
MS.gene052760.t1 AT5G28470 35.417 144 88 4 1 139 103 246 2.86e-20 90.9
MS.gene052760.t1 AT5G28470 27.222 180 98 4 127 276 289 465 7.77e-15 74.7
MS.gene052760.t1 AT1G22550 42.593 108 60 1 163 268 353 460 3.04e-20 90.9
MS.gene052760.t1 AT1G22550 43.956 91 51 0 33 123 153 243 2.87e-19 87.8
MS.gene052760.t1 AT1G69860 36.154 130 77 3 1 124 104 233 1.06e-19 89.0
MS.gene052760.t1 AT1G69860 28.824 170 85 4 126 268 291 451 1.85e-11 64.7
MS.gene052760.t1 AT3G01350 40.541 111 63 1 163 270 343 453 5.43e-18 84.0
MS.gene052760.t1 AT3G25280 38.017 121 69 2 1 121 107 221 2.31e-17 82.0
MS.gene052760.t1 AT3G45690 34.513 113 66 3 15 124 119 226 7.41e-15 74.7
MS.gene052760.t1 AT3G45680 33.594 128 76 4 1 124 106 228 2.25e-13 70.5
MS.gene052760.t1 AT3G45710 33.333 111 66 3 17 124 124 229 5.28e-13 69.3

Find 67 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGATGGGGATGGGGTTT+TGG 0.157173 4.4:+85748022 MS.gene052760:CDS
ACACTCTAAGTGTCATCTTC+TGG 0.233776 4.4:+85749186 MS.gene052760:CDS
TCAAGTAGAGTGCTATAAAA+AGG 0.238581 4.4:-85747823 None:intergenic
TTTCCCTGATTTCAGGTGTT+TGG 0.304831 4.4:+85748907 MS.gene052760:intron
TTGCTTCCTCAGTGTTGGTT+TGG 0.331261 4.4:+85747987 MS.gene052760:CDS
CACTCTAAGTGTCATCTTCT+GGG 0.360635 4.4:+85749187 MS.gene052760:CDS
TTTGATGAAAACGATGAGAT+TGG 0.367982 4.4:+85747902 MS.gene052760:CDS
CCATCCCTATGTCAATCTTC+TGG 0.378069 4.4:+85749396 MS.gene052760:CDS
TACTTGATTGCGCTTGGAAC+CGG 0.379536 4.4:+85747839 MS.gene052760:CDS
TGATTTCAGGTGTTTGGATA+AGG 0.407783 4.4:+85748913 MS.gene052760:intron
ATGAATGTTGGATGGGGATG+GGG 0.412007 4.4:+85748016 MS.gene052760:CDS
AATGGCTGCCATCCAACTTC+AGG 0.433163 4.4:+85747788 MS.gene052760:CDS
TTGATGAAAACGATGAGATT+GGG 0.440159 4.4:+85747903 MS.gene052760:CDS
ACTCATTGCTTCCTCAGTGT+TGG 0.444704 4.4:+85747982 MS.gene052760:CDS
TAGAATCCCTTCCACGATCA+TGG 0.456705 4.4:-85749321 None:intergenic
GTGCAGAGCCTCCATGGATT+CGG 0.459808 4.4:-85748974 None:intergenic
TGACACTTAGAGTGTCGAAA+AGG 0.462376 4.4:-85749178 None:intergenic
AAGCCTTCATGTGATACTAA+TGG 0.469977 4.4:+85747770 MS.gene052760:CDS
GCTGTGTGAATCCGTGTTCA+TGG 0.471308 4.4:-85749259 None:intergenic
AGATGAATGTTGGATGGGGA+TGG 0.471784 4.4:+85748014 MS.gene052760:CDS
GTTTGGATACAGATGAATGT+TGG 0.474053 4.4:+85748004 MS.gene052760:CDS
GATGAATGTTGGATGGGGAT+GGG 0.476485 4.4:+85748015 MS.gene052760:CDS
TTCCACGATCATGGAAATGA+TGG 0.476562 4.4:-85749312 None:intergenic
GCACTCTACTTGATTGCGCT+TGG 0.477461 4.4:+85747833 MS.gene052760:CDS
TTCACACAGCTTCAAAGAAT+CGG 0.484967 4.4:+85749272 MS.gene052760:CDS
TCAGTTTACTCTACTCATCT+AGG 0.499206 4.4:-85749762 None:intergenic
ACGATGAGACGGTCGTAGAC+CGG 0.502734 4.4:-85749212 None:intergenic
CGATGAGACGGTCGTAGACC+GGG 0.505276 4.4:-85749211 None:intergenic
AAGTGTCATCTTCTGGGCCC+CGG 0.506775 4.4:+85749193 MS.gene052760:CDS
GACACTTAGAGTGTCGAAAA+GGG 0.515286 4.4:-85749177 None:intergenic
CGGTGAACTTTCTTGCGAAA+GGG 0.518248 4.4:-85749235 None:intergenic
TAAAAGATTTACCGAATCCA+TGG 0.520585 4.4:+85748963 MS.gene052760:CDS
GTTATTGTGCAGAGCCTCCA+TGG 0.521637 4.4:-85748980 None:intergenic
ATCATTTCCATGATCGTGGA+AGG 0.528300 4.4:+85749314 MS.gene052760:CDS
CAGTTTGTCCTGAAGTTGGA+TGG 0.532360 4.4:-85747796 None:intergenic
CCGGTGAACTTTCTTGCGAA+AGG 0.533554 4.4:-85749236 None:intergenic
AACACATGGTTTAATACCAC+CGG 0.537787 4.4:-85747858 None:intergenic
AAAAGGGAGAGGGAGGCTGA+TGG 0.541173 4.4:-85749161 None:intergenic
GCTGCAGTTTGTCCTGAAGT+TGG 0.541357 4.4:-85747800 None:intergenic
CAGCTTCAAAGAATCGGAAT+CGG 0.543032 4.4:+85749278 MS.gene052760:CDS
TTGCGAAAGGGACGATGAGA+CGG 0.547490 4.4:-85749223 None:intergenic
TGTGAATCCGTGTTCATGGC+CGG 0.553955 4.4:-85749255 None:intergenic
GGATACAGATGAATGTTGGA+TGG 0.554056 4.4:+85748008 MS.gene052760:CDS
TTGATTGCGCTTGGAACCGG+TGG 0.560057 4.4:+85747842 MS.gene052760:CDS
TGGAGTACCTGGAGTTACAA+TGG 0.564212 4.4:+85748042 MS.gene052760:CDS
GATACAGATGAATGTTGGAT+GGG 0.566164 4.4:+85748009 MS.gene052760:CDS
TCACATGAAGGCTTTAGTCC+AGG 0.568348 4.4:-85747761 None:intergenic
CCAGAAGATTGACATAGGGA+TGG 0.571275 4.4:-85749396 None:intergenic
ACTTGCCAGAAGATTGACAT+AGG 0.572578 4.4:-85749401 None:intergenic
TGGAAATGATGGAGATGACT+AGG 0.577584 4.4:-85749301 None:intergenic
CTCCATCATTTCCATGATCG+TGG 0.577656 4.4:+85749310 MS.gene052760:CDS
TTAGAGTGTCGAAAAGGGAG+AGG 0.583008 4.4:-85749172 None:intergenic
GCGATAACCATTGTAACTCC+AGG 0.593851 4.4:-85748049 None:intergenic
TAGAGTGTCGAAAAGGGAGA+GGG 0.597883 4.4:-85749171 None:intergenic
AGTGTCGAAAAGGGAGAGGG+AGG 0.610825 4.4:-85749168 None:intergenic
AAGTTCACCGGCCATGAACA+CGG 0.612897 4.4:+85749248 MS.gene052760:CDS
TCATTTCCATGATCGTGGAA+GGG 0.614151 4.4:+85749315 MS.gene052760:CDS
CAGCCATTAGTATCACATGA+AGG 0.621135 4.4:-85747773 None:intergenic
CCTTTCGCAAGAAAGTTCAC+CGG 0.638836 4.4:+85749236 MS.gene052760:CDS
CTTGCCAGAAGATTGACATA+GGG 0.645695 4.4:-85749400 None:intergenic
AACACAATGGATCAACACAT+TGG 0.661215 4.4:+85749122 MS.gene052760:CDS
TGTGTTACAAGGCAACACAA+TGG 0.665398 4.4:+85749109 MS.gene052760:intron
GATGAGACGGTCGTAGACCG+GGG 0.681272 4.4:-85749210 None:intergenic
ATACAGATGAATGTTGGATG+GGG 0.683953 4.4:+85748010 MS.gene052760:CDS
AAGATTTACCGAATCCATGG+AGG 0.715910 4.4:+85748966 MS.gene052760:CDS
CTGTATCCAAACCAACACTG+AGG 0.766087 4.4:-85747993 None:intergenic
GCACCTACAAGGAAATACTG+CGG 0.821807 4.4:-85749425 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATATAGAAAAAATTTAT+TGG + chr4.4:85748516-85748535 MS.gene052760:intron 10.0%
!! CATAAAGATGAATATAAAAA+TGG - chr4.4:85748779-85748798 None:intergenic 15.0%
!!! TTTTACTTCTCAATTAATAT+TGG + chr4.4:85747956-85747975 MS.gene052760:CDS 15.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr4.4:85748387-85748406 MS.gene052760:intron 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG + chr4.4:85748385-85748404 MS.gene052760:intron 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG + chr4.4:85748386-85748405 MS.gene052760:intron 20.0%
!! GGACAAATATAAAATCAAAT+GGG + chr4.4:85748662-85748681 MS.gene052760:intron 20.0%
!! TTTAATACACATACAAACAA+AGG - chr4.4:85748344-85748363 None:intergenic 20.0%
!! TTTCTTAAGAAATGTGAAAA+AGG - chr4.4:85748268-85748287 None:intergenic 20.0%
!!! ATGAAGTTTAGAATAAGAAA+AGG - chr4.4:85748821-85748840 None:intergenic 20.0%
! ACAAAAGTTACTACAAGAAA+TGG + chr4.4:85749590-85749609 MS.gene052760:intron 25.0%
! ACCGATGAAGAAAAATATAA+TGG - chr4.4:85748074-85748093 None:intergenic 25.0%
! ATGCATCTAGTAATTTGAAA+AGG + chr4.4:85748432-85748451 MS.gene052760:intron 25.0%
! ATTCCGAATAATATGAATAG+GGG + chr4.4:85749626-85749645 MS.gene052760:intron 25.0%
! CAAATATAAAATCAAATGGG+TGG + chr4.4:85748665-85748684 MS.gene052760:intron 25.0%
! GATTCCGAATAATATGAATA+GGG + chr4.4:85749625-85749644 MS.gene052760:intron 25.0%
! GGGACAAATATAAAATCAAA+TGG + chr4.4:85748661-85748680 MS.gene052760:intron 25.0%
! TCAAACTAAGAATTGTCAAA+AGG - chr4.4:85749673-85749692 None:intergenic 25.0%
! TGAAAAGGAGTTTACATTTA+GGG + chr4.4:85748447-85748466 MS.gene052760:intron 25.0%
! TTGAAAAGGAGTTTACATTT+AGG + chr4.4:85748446-85748465 MS.gene052760:intron 25.0%
!! GCCATTATATTTTTCTTCAT+CGG + chr4.4:85748070-85748089 MS.gene052760:CDS 25.0%
!! TAGAGAAAGTTTCTTCTTTT+AGG + chr4.4:85748595-85748614 MS.gene052760:intron 25.0%
!! TGATTTTATATTTGTCCCTA+GGG - chr4.4:85748659-85748678 None:intergenic 25.0%
!! TTCATTGTGTATTTGCTAAT+AGG + chr4.4:85749698-85749717 MS.gene052760:intron 25.0%
!! TTGATTTTATATTTGTCCCT+AGG - chr4.4:85748660-85748679 None:intergenic 25.0%
!!! AGAAAAGCTCTTTTTTTAAC+TGG + chr4.4:85747933-85747952 MS.gene052760:CDS 25.0%
AAACAAATTTCCCTGATTTC+AGG + chr4.4:85748900-85748919 MS.gene052760:intron 30.0%
AAGAAATGTGAAAAAGGCAA+AGG - chr4.4:85748262-85748281 None:intergenic 30.0%
ACAAAAAAGTGACTCATCTA+AGG + chr4.4:85749728-85749747 MS.gene052760:CDS 30.0%
ATCTTTATGAGACTACTCAT+TGG + chr4.4:85748790-85748809 MS.gene052760:intron 30.0%
CATACAAACAAAGGACAATT+TGG - chr4.4:85748335-85748354 None:intergenic 30.0%
GAGTAGAATCTAACATCAAA+GGG + chr4.4:85748707-85748726 MS.gene052760:intron 30.0%
GCAAAAAAAGATGAAACACA+TGG - chr4.4:85747875-85747894 None:intergenic 30.0%
GGATTCCGAATAATATGAAT+AGG + chr4.4:85749624-85749643 MS.gene052760:intron 30.0%
TAAAAGATTTACCGAATCCA+TGG + chr4.4:85748963-85748982 MS.gene052760:CDS 30.0%
TAAAGAAGAGACTTATCATC+TGG - chr4.4:85748197-85748216 None:intergenic 30.0%
TGACCCCTATTCATATTATT+CGG - chr4.4:85749632-85749651 None:intergenic 30.0%
TTGATGAAAACGATGAGATT+GGG + chr4.4:85747903-85747922 MS.gene052760:CDS 30.0%
TTGCAGCATTTAAGAAACTT+GGG + chr4.4:85748158-85748177 MS.gene052760:intron 30.0%
TTTGATGAAAACGATGAGAT+TGG + chr4.4:85747902-85747921 MS.gene052760:CDS 30.0%
! CAAGTAGAGTGCTATAAAAA+GGG - chr4.4:85747825-85747844 None:intergenic 30.0%
! GCTGATGGAATTTTGAATTT+AGG - chr4.4:85749149-85749168 None:intergenic 30.0%
! TATTAATTAGGGGCATGTTT+AGG + chr4.4:85748397-85748416 MS.gene052760:intron 30.0%
! TCAAGTAGAGTGCTATAAAA+AGG - chr4.4:85747826-85747845 None:intergenic 30.0%
! TCTCATCGTTTTCATCAAAT+TGG - chr4.4:85747901-85747920 None:intergenic 30.0%
!! GATTCGGTAAATCTTTTATC+TGG - chr4.4:85748961-85748980 None:intergenic 30.0%
!!! GATCATAGTAGTTGTTTTTG+CGG - chr4.4:85749370-85749389 None:intergenic 30.0%
!!! TTTTTTAACATGTGCCCTAA+GGG + chr4.4:85748618-85748637 MS.gene052760:intron 30.0%
AAATGTGAAAAAGGCAAAGG+AGG - chr4.4:85748259-85748278 None:intergenic 35.0%
AACACAAACATGGTTCCAAT+TGG - chr4.4:85749095-85749114 None:intergenic 35.0%
AACACAATGGATCAACACAT+TGG + chr4.4:85749122-85749141 MS.gene052760:CDS 35.0%
AACACATGGTTTAATACCAC+CGG - chr4.4:85747861-85747880 None:intergenic 35.0%
AAGCCTTCATGTGATACTAA+TGG + chr4.4:85747770-85747789 MS.gene052760:CDS 35.0%
ACAGTCAAATTGGAACCAAT+TGG + chr4.4:85749077-85749096 MS.gene052760:intron 35.0%
ACTACAAGAAATGGAAGTCT+TGG + chr4.4:85749599-85749618 MS.gene052760:intron 35.0%
ATACAGATGAATGTTGGATG+GGG + chr4.4:85748010-85748029 MS.gene052760:CDS 35.0%
CAAATGGGTGGTTACATATA+GGG + chr4.4:85748677-85748696 MS.gene052760:intron 35.0%
GAGTTTACATTTAGGGACAA+GGG + chr4.4:85748454-85748473 MS.gene052760:intron 35.0%
GATACAGATGAATGTTGGAT+GGG + chr4.4:85748009-85748028 MS.gene052760:CDS 35.0%
GATATTAGTGAAAACTTCCG+CGG - chr4.4:85749450-85749469 None:intergenic 35.0%
GCAAAGGAGGTTTACATATA+GGG - chr4.4:85748246-85748265 None:intergenic 35.0%
GCAACAGTATACAGTCAAAT+TGG + chr4.4:85749067-85749086 MS.gene052760:intron 35.0%
GGAGTAGAATCTAACATCAA+AGG + chr4.4:85748706-85748725 MS.gene052760:intron 35.0%
GTTGCAGCATTTAAGAAACT+TGG + chr4.4:85748157-85748176 MS.gene052760:intron 35.0%
GTTTGGATACAGATGAATGT+TGG + chr4.4:85748004-85748023 MS.gene052760:CDS 35.0%
TATAGACTTCAAATACCTGG+TGG + chr4.4:85748103-85748122 MS.gene052760:intron 35.0%
TATCCAAACACCTGAAATCA+GGG - chr4.4:85748913-85748932 None:intergenic 35.0%
TCAAATGGGTGGTTACATAT+AGG + chr4.4:85748676-85748695 MS.gene052760:intron 35.0%
TCACTCACAACTAATGCATT+GGG + chr4.4:85749533-85749552 MS.gene052760:intron 35.0%
TGACCATAAAAGAACTCCAT+CGG - chr4.4:85749476-85749495 None:intergenic 35.0%
TGGTATAGACTTCAAATACC+TGG + chr4.4:85748100-85748119 MS.gene052760:intron 35.0%
TTATCCAAACACCTGAAATC+AGG - chr4.4:85748914-85748933 None:intergenic 35.0%
TTCACACAGCTTCAAAGAAT+CGG + chr4.4:85749272-85749291 MS.gene052760:CDS 35.0%
TTCACTCACAACTAATGCAT+TGG + chr4.4:85749532-85749551 MS.gene052760:intron 35.0%
TTGACTGTATACTGTTGCAA+AGG - chr4.4:85749065-85749084 None:intergenic 35.0%
! CATTTGTGTGTTCAAGTTTC+CGG - chr4.4:85748735-85748754 None:intergenic 35.0%
! CGGTAAATCTTTTATCTGGT+CGG - chr4.4:85748957-85748976 None:intergenic 35.0%
! GCGGAAGTTTTCACTAATAT+CGG + chr4.4:85749449-85749468 MS.gene052760:intron 35.0%
! TGATTTCAGGTGTTTGGATA+AGG + chr4.4:85748913-85748932 MS.gene052760:intron 35.0%
! TTTTCTTCATCGGTAGTAGA+TGG + chr4.4:85748080-85748099 MS.gene052760:CDS 35.0%
!! AATCATTAACTTGTGCCTTG+AGG - chr4.4:85748496-85748515 None:intergenic 35.0%
!! ATCATTAACTTGTGCCTTGA+GGG - chr4.4:85748495-85748514 None:intergenic 35.0%
!!! GTTTTTTAACATGTGCCCTA+AGG + chr4.4:85748617-85748636 MS.gene052760:intron 35.0%
AAGATTTACCGAATCCATGG+AGG + chr4.4:85748966-85748985 MS.gene052760:CDS 40.0%
AATCTAACATCAAAGGGAGC+CGG + chr4.4:85748713-85748732 MS.gene052760:intron 40.0%
ACACTCTAAGTGTCATCTTC+TGG + chr4.4:85749186-85749205 MS.gene052760:CDS 40.0%
ACTTGACAAATCCTTGTGAG+TGG - chr4.4:85748133-85748152 None:intergenic 40.0%
ACTTGCCAGAAGATTGACAT+AGG - chr4.4:85749404-85749423 None:intergenic 40.0%
AGGAGGTTTACATATAGGGA+CGG - chr4.4:85748242-85748261 None:intergenic 40.0%
ATCATTTCCATGATCGTGGA+AGG + chr4.4:85749314-85749333 MS.gene052760:CDS 40.0%
CAAGAAATGGAAGTCTTGGT+TGG + chr4.4:85749603-85749622 MS.gene052760:intron 40.0%
CACAAACTTCTCATACCATC+AGG - chr4.4:85749503-85749522 None:intergenic 40.0%
CACAAGTTAACACTACCCTA+GGG + chr4.4:85748641-85748660 MS.gene052760:intron 40.0%
CACTCTAAGTGTCATCTTCT+GGG + chr4.4:85749187-85749206 MS.gene052760:CDS 40.0%
CAGCCATTAGTATCACATGA+AGG - chr4.4:85747776-85747795 None:intergenic 40.0%
CAGCTTCAAAGAATCGGAAT+CGG + chr4.4:85749278-85749297 MS.gene052760:CDS 40.0%
CTTGCCAGAAGATTGACATA+GGG - chr4.4:85749403-85749422 None:intergenic 40.0%
GGAACCATGTTTGTGTTACA+AGG + chr4.4:85749098-85749117 MS.gene052760:intron 40.0%
GGAGTTTACATTTAGGGACA+AGG + chr4.4:85748453-85748472 MS.gene052760:intron 40.0%
GGATACAGATGAATGTTGGA+TGG + chr4.4:85748008-85748027 MS.gene052760:CDS 40.0%
GGCAAAGGAGGTTTACATAT+AGG - chr4.4:85748247-85748266 None:intergenic 40.0%
GTTGCCTTGTAACACAAACA+TGG - chr4.4:85749105-85749124 None:intergenic 40.0%
TCATTTCCATGATCGTGGAA+GGG + chr4.4:85749315-85749334 MS.gene052760:CDS 40.0%
TGTGTTACAAGGCAACACAA+TGG + chr4.4:85749109-85749128 MS.gene052760:intron 40.0%
TTCCACGATCATGGAAATGA+TGG - chr4.4:85749315-85749334 None:intergenic 40.0%
TTTCACTAATATCGGTCCGA+TGG + chr4.4:85749457-85749476 MS.gene052760:intron 40.0%
! ACATTTTCTGCAATTGCACC+TGG + chr4.4:85747743-85747762 MS.gene052760:CDS 40.0%
! GATGGAGTTCTTTTATGGTC+AGG + chr4.4:85749475-85749494 MS.gene052760:intron 40.0%
! TGGAAATGATGGAGATGACT+AGG - chr4.4:85749304-85749323 None:intergenic 40.0%
! TTTCCCTGATTTCAGGTGTT+TGG + chr4.4:85748907-85748926 MS.gene052760:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr4.4:85748478-85748497 MS.gene052760:intron 40.0%
!! AGTGTTAACTTGTGCCCTTA+GGG - chr4.4:85748635-85748654 None:intergenic 40.0%
!! GACACTTAGAGTGTCGAAAA+GGG - chr4.4:85749180-85749199 None:intergenic 40.0%
!! TAGTGTTAACTTGTGCCCTT+AGG - chr4.4:85748636-85748655 None:intergenic 40.0%
!! TGACACTTAGAGTGTCGAAA+AGG - chr4.4:85749181-85749200 None:intergenic 40.0%
ACTCATTGCTTCCTCAGTGT+TGG + chr4.4:85747982-85748001 MS.gene052760:CDS 45.0%
AGATGAATGTTGGATGGGGA+TGG + chr4.4:85748014-85748033 MS.gene052760:CDS 45.0%
AGGTTTACATATAGGGACGG+AGG - chr4.4:85748239-85748258 None:intergenic 45.0%
ATGAATGTTGGATGGGGATG+GGG + chr4.4:85748016-85748035 MS.gene052760:CDS 45.0%
CAGTTTGTCCTGAAGTTGGA+TGG - chr4.4:85747799-85747818 None:intergenic 45.0%
CCAGAAGATTGACATAGGGA+TGG - chr4.4:85749399-85749418 None:intergenic 45.0%
CCATCCCTATGTCAATCTTC+TGG + chr4.4:85749396-85749415 MS.gene052760:CDS 45.0%
CCTTTCGCAAGAAAGTTCAC+CGG + chr4.4:85749236-85749255 MS.gene052760:CDS 45.0%
CGGTGAACTTTCTTGCGAAA+GGG - chr4.4:85749238-85749257 None:intergenic 45.0%
CTCCATCATTTCCATGATCG+TGG + chr4.4:85749310-85749329 MS.gene052760:CDS 45.0%
CTGTATCCAAACCAACACTG+AGG - chr4.4:85747996-85748015 None:intergenic 45.0%
GATGAATGTTGGATGGGGAT+GGG + chr4.4:85748015-85748034 MS.gene052760:CDS 45.0%
GCACAAGTTAACACTACCCT+AGG + chr4.4:85748640-85748659 MS.gene052760:intron 45.0%
GCACCTACAAGGAAATACTG+CGG - chr4.4:85749428-85749447 None:intergenic 45.0%
GCGATAACCATTGTAACTCC+AGG - chr4.4:85748052-85748071 None:intergenic 45.0%
GGTTTACATATAGGGACGGA+GGG - chr4.4:85748238-85748257 None:intergenic 45.0%
GTACCGCAGTATTTCCTTGT+AGG + chr4.4:85749422-85749441 MS.gene052760:intron 45.0%
TACTTGATTGCGCTTGGAAC+CGG + chr4.4:85747839-85747858 MS.gene052760:CDS 45.0%
TAGAATCCCTTCCACGATCA+TGG - chr4.4:85749324-85749343 None:intergenic 45.0%
TGGGTGGTTACATATAGGGA+CGG + chr4.4:85748681-85748700 MS.gene052760:intron 45.0%
TGGTTACATATAGGGACGGA+GGG + chr4.4:85748685-85748704 MS.gene052760:intron 45.0%
! GGTCCGATGGAGTTCTTTTA+TGG + chr4.4:85749470-85749489 MS.gene052760:intron 45.0%
! TCACATGAAGGCTTTAGTCC+AGG - chr4.4:85747764-85747783 None:intergenic 45.0%
! TGGAGTACCTGGAGTTACAA+TGG + chr4.4:85748042-85748061 MS.gene052760:CDS 45.0%
! TTTTATGGTCAGGCACCTGA+TGG + chr4.4:85749485-85749504 MS.gene052760:intron 45.0%
!! TAGAGTGTCGAAAAGGGAGA+GGG - chr4.4:85749174-85749193 None:intergenic 45.0%
!! TGTTTTTGCGGACAATGTCG+AGG - chr4.4:85749358-85749377 None:intergenic 45.0%
!! TTAGAGTGTCGAAAAGGGAG+AGG - chr4.4:85749175-85749194 None:intergenic 45.0%
!! TTGCTTCCTCAGTGTTGGTT+TGG + chr4.4:85747987-85748006 MS.gene052760:CDS 45.0%
AAGTTCACCGGCCATGAACA+CGG + chr4.4:85749248-85749267 MS.gene052760:CDS 50.0%
AATGGCTGCCATCCAACTTC+AGG + chr4.4:85747788-85747807 MS.gene052760:CDS 50.0%
CCGGTGAACTTTCTTGCGAA+AGG - chr4.4:85749239-85749258 None:intergenic 50.0%
CGTTCGTTTACTCCCCGTTT+GGG + chr4.4:85749027-85749046 MS.gene052760:intron 50.0%
GCACTCTACTTGATTGCGCT+TGG + chr4.4:85747833-85747852 MS.gene052760:CDS 50.0%
GCTGCAGTTTGTCCTGAAGT+TGG - chr4.4:85747803-85747822 None:intergenic 50.0%
GCTGTGTGAATCCGTGTTCA+TGG - chr4.4:85749262-85749281 None:intergenic 50.0%
GTGGTTACATATAGGGACGG+AGG + chr4.4:85748684-85748703 MS.gene052760:intron 50.0%
GTTATTGTGCAGAGCCTCCA+TGG - chr4.4:85748983-85749002 None:intergenic 50.0%
TCGTTCGTTTACTCCCCGTT+TGG + chr4.4:85749026-85749045 MS.gene052760:intron 50.0%
TGTGAATCCGTGTTCATGGC+CGG - chr4.4:85749258-85749277 None:intergenic 50.0%
TTGCGAAAGGGACGATGAGA+CGG - chr4.4:85749226-85749245 None:intergenic 50.0%
! GTATTTCCTTGTAGGTGCCG+CGG + chr4.4:85749430-85749449 MS.gene052760:intron 50.0%
! TTTTGCGGACAATGTCGAGG+CGG - chr4.4:85749355-85749374 None:intergenic 50.0%
AAAAGGGAGAGGGAGGCTGA+TGG - chr4.4:85749164-85749183 None:intergenic 55.0%
AAACTTCCGCGGCACCTACA+AGG - chr4.4:85749439-85749458 None:intergenic 55.0%
AAGTGTCATCTTCTGGGCCC+CGG + chr4.4:85749193-85749212 MS.gene052760:CDS 55.0%
ACGATGAGACGGTCGTAGAC+CGG - chr4.4:85749215-85749234 None:intergenic 55.0%
CTATCCGTGATGCCCAAACG+GGG - chr4.4:85749042-85749061 None:intergenic 55.0%
CTGGTGGAAGTCCACTCACA+AGG + chr4.4:85748119-85748138 MS.gene052760:intron 55.0%
GCTATCCGTGATGCCCAAAC+GGG - chr4.4:85749043-85749062 None:intergenic 55.0%
GGCTATCCGTGATGCCCAAA+CGG - chr4.4:85749044-85749063 None:intergenic 55.0%
GTGCAGAGCCTCCATGGATT+CGG - chr4.4:85748977-85748996 None:intergenic 55.0%
TACTCCCCGTTTGGGCATCA+CGG + chr4.4:85749035-85749054 MS.gene052760:intron 55.0%
TTGATTGCGCTTGGAACCGG+TGG + chr4.4:85747842-85747861 MS.gene052760:CDS 55.0%
! AGTGTCGAAAAGGGAGAGGG+AGG - chr4.4:85749171-85749190 None:intergenic 55.0%
! CTTGTGAGTGGACTTCCACC+AGG - chr4.4:85748121-85748140 None:intergenic 55.0%
! GTTGGATGGGGATGGGGTTT+TGG + chr4.4:85748022-85748041 MS.gene052760:CDS 55.0%
!!! GGATGGGGTTTTGGAGTACC+TGG + chr4.4:85748031-85748050 MS.gene052760:CDS 55.0%
CGATGAGACGGTCGTAGACC+GGG - chr4.4:85749214-85749233 None:intergenic 60.0%
GATGAGACGGTCGTAGACCG+GGG - chr4.4:85749213-85749232 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 85747731 85749770 85747731 ID=MS.gene052760
chr4.4 mRNA 85747731 85749770 85747731 ID=MS.gene052760.t1;Parent=MS.gene052760
chr4.4 exon 85747731 85748101 85747731 ID=MS.gene052760.t1.exon1;Parent=MS.gene052760.t1
chr4.4 CDS 85747731 85748101 85747731 ID=cds.MS.gene052760.t1;Parent=MS.gene052760.t1
chr4.4 exon 85748922 85749031 85748922 ID=MS.gene052760.t1.exon2;Parent=MS.gene052760.t1
chr4.4 CDS 85748922 85749031 85748922 ID=cds.MS.gene052760.t1;Parent=MS.gene052760.t1
chr4.4 exon 85749120 85749439 85749120 ID=MS.gene052760.t1.exon3;Parent=MS.gene052760.t1
chr4.4 CDS 85749120 85749439 85749120 ID=cds.MS.gene052760.t1;Parent=MS.gene052760.t1
chr4.4 exon 85749720 85749770 85749720 ID=MS.gene052760.t1.exon4;Parent=MS.gene052760.t1
chr4.4 CDS 85749720 85749770 85749720 ID=cds.MS.gene052760.t1;Parent=MS.gene052760.t1
Gene Sequence

>MS.gene052760

ATGGCACTTTTAACATTTTCTGCAATTGCACCTGGACTAAAGCCTTCATGTGATACTAATGGCTGCCATCCAACTTCAGGACAAACTGCAGCCCTTTTTATAGCACTCTACTTGATTGCGCTTGGAACCGGTGGTATTAAACCATGTGTTTCATCTTTTTTTGCTAACCAATTTGATGAAAACGATGAGATTGGGACGAAAAAGAAAAGCTCTTTTTTTAACTGGTTTTACTTCTCAATTAATATTGGTGCACTCATTGCTTCCTCAGTGTTGGTTTGGATACAGATGAATGTTGGATGGGGATGGGGTTTTGGAGTACCTGGAGTTACAATGGTTATCGCCATTATATTTTTCTTCATCGGTAGTAGATGGTATAGACTTCAAATACCTGGTGGAAGTCCACTCACAAGGATTTGTCAAGTTATTGTTGCAGCATTTAAGAAACTTGGGCAACAAGCAAGTTCCAGATGATAAGTCTCTTCTTTATGAGACTACTGATGTACTCCCTCCGTCCCTATATGTAAACCTCCTTTGCCTTTTTCACATTTCTTAAGAAAAGTTGTTAGTGTAATTAATGTGTTTATTTTGTGTGTTAATATTACCAAATTGTCCTTTGTTTGTATGTGTATTAAATTTGACTTTACATATTTCAAGACAAGTTAGTAGTATTAATTAGGGGCATGTTTAGGAAAAAATAATAAATGCATCTAGTAATTTGAAAAGGAGTTTACATTTAGGGACAAGGGAAATGTTAACTTGTGCCCTCAAGGCACAAGTTAATGATTCAAATATAGAAAAAATTTATTGGAATTTGTGCATTGCATTTAATATTTAACTTTTTAATCATTTAAATGCACAAAATTTTAGAGAAAGTTTCTTCTTTTAGGTTTTTTAACATGTGCCCTAAGGGCACAAGTTAACACTACCCTAGGGACAAATATAAAATCAAATGGGTGGTTACATATAGGGACGGAGGGAGTAGAATCTAACATCAAAGGGAGCCGGAAACTTGAACACACAAATGAACTGAAGTAAGATATCAAAACCATTTTTATATTCATCTTTATGAGACTACTCATTGGCATGTCCTTTTCTTATTCTAAACTTCATGATTCATTAACGCTAAAGTTTGTTTTACATTCTTATCTTACATTATAATAATAACTAACAAACAAATTTCCCTGATTTCAGGTGTTTGGATAAGGCAGCAGTAGAGACAGAATCCGACCAGATAAAAGATTTACCGAATCCATGGAGGCTCTGCACAATAACACAAGTCGAAGAACTCAAATCAATCGTTCGTTTACTCCCCGTTTGGGCATCACGGATAGCCTTTGCAACAGTATACAGTCAAATTGGAACCAATTGGAACCATGTTTGTGTTACAAGGCAACACAATGGATCAACACATTGGTCCTAAATTCAAAATTCCATCAGCCTCCCTCTCCCTTTTCGACACTCTAAGTGTCATCTTCTGGGCCCCGGTCTACGACCGTCTCATCGTCCCTTTCGCAAGAAAGTTCACCGGCCATGAACACGGATTCACACAGCTTCAAAGAATCGGAATCGGCCTAGTCATCTCCATCATTTCCATGATCGTGGAAGGGATTCTAGAAGTCATCCGCCTCGACATTGTCCGCAAAAACAACTACTATGATCTCGAAACCATCCCTATGTCAATCTTCTGGCAAGTACCGCAGTATTTCCTTGTAGGTGCCGCGGAAGTTTTCACTAATATCGGTCCGATGGAGTTCTTTTATGGTCAGGCACCTGATGGTATGAGAAGTTTGTGTGCTGCACTTTCACTCACAACTAATGCATTGGGAAATTATGTGAGTACATTGCTTGTTACTATTGTCACAAAAGTTACTACAAGAAATGGAAGTCTTGGTTGGATTCCGAATAATATGAATAGGGGTCATCTTGATTACTTCTACTGCCTTTTGACAATTCTTAGTTTGATCAACTTCATTGTGTATTTGCTAATAGGTATACATACAAAAAAGTGACTCATCTAAGGTGAGAAATGTACCTAGATGA
Protein sequence

>MS.gene052760.t1

MALLTFSAIAPGLKPSCDTNGCHPTSGQTAALFIALYLIALGTGGIKPCVSSFFANQFDENDEIGTKKKSSFFNWFYFSINIGALIASSVLVWIQMNVGWGWGFGVPGVTMVIAIIFFFIGSRWCLDKAAVETESDQIKDLPNPWRLCTITQVEELKSIVRNTMDQHIGPKFKIPSASLSLFDTLSVIFWAPVYDRLIVPFARKFTGHEHGFTQLQRIGIGLVISIISMIVEGILEVIRLDIVRKNNYYDLETIPMSIFWQVPQYFLVYIQKSDSSKVRNVPR