Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053870.t1 | XP_003614555.1 | 94.9 | 354 | 6 | 1 | 1 | 342 | 1 | 354 | 7.90E-187 | 662.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053870.t1 | Q8RWA5 | 73.1 | 275 | 67 | 3 | 16 | 286 | 28 | 299 | 7.9e-111 | 401.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053870.t1 | G7JZG8 | 94.9 | 354 | 6 | 1 | 1 | 342 | 1 | 354 | 5.7e-187 | 662.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53861 | MS.gene053870 | PPI |
| MS.gene048687 | MS.gene053870 | PPI |
| MS.gene053870 | MS.gene04991 | PPI |
| MS.gene053870 | MS.gene53859 | PPI |
| MS.gene008298 | MS.gene053870 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053870.t1 | MTR_5g055410 | 94.915 | 354 | 6 | 1 | 1 | 342 | 1 | 354 | 0.0 | 691 |
| MS.gene053870.t1 | MTR_7g109135 | 66.330 | 297 | 88 | 4 | 16 | 308 | 29 | 317 | 4.42e-135 | 387 |
| MS.gene053870.t1 | MTR_1g087840 | 66.549 | 284 | 87 | 3 | 21 | 300 | 31 | 310 | 8.67e-131 | 376 |
| MS.gene053870.t1 | MTR_7g109135 | 63.973 | 297 | 88 | 5 | 16 | 308 | 29 | 310 | 2.46e-127 | 367 |
| MS.gene053870.t1 | MTR_7g109135 | 66.260 | 246 | 76 | 2 | 63 | 308 | 1 | 239 | 6.58e-114 | 330 |
| MS.gene053870.t1 | MTR_7g109135 | 31.818 | 176 | 108 | 6 | 22 | 190 | 58 | 228 | 5.86e-13 | 68.2 |
| MS.gene053870.t1 | MTR_7g109135 | 64.732 | 224 | 72 | 2 | 85 | 308 | 2 | 218 | 8.55e-98 | 288 |
| MS.gene053870.t1 | MTR_7g109135 | 31.818 | 176 | 108 | 6 | 22 | 190 | 37 | 207 | 1.50e-13 | 69.3 |
| MS.gene053870.t1 | MTR_8g076760 | 38.028 | 284 | 153 | 7 | 25 | 293 | 30 | 305 | 2.97e-50 | 170 |
| MS.gene053870.t1 | MTR_8g027975 | 33.115 | 305 | 174 | 9 | 13 | 293 | 55 | 353 | 7.07e-36 | 133 |
| MS.gene053870.t1 | MTR_8g027975 | 27.638 | 199 | 132 | 5 | 106 | 298 | 50 | 242 | 5.97e-14 | 72.4 |
| MS.gene053870.t1 | MTR_3g098460 | 32.982 | 285 | 172 | 10 | 14 | 293 | 210 | 480 | 3.32e-34 | 131 |
| MS.gene053870.t1 | MTR_5g009500 | 32.119 | 302 | 177 | 8 | 14 | 293 | 43 | 338 | 4.76e-34 | 128 |
| MS.gene053870.t1 | MTR_5g009500 | 29.412 | 204 | 132 | 6 | 101 | 298 | 32 | 229 | 2.68e-15 | 76.3 |
| MS.gene053870.t1 | MTR_8g096050 | 32.292 | 288 | 170 | 9 | 14 | 293 | 232 | 502 | 2.74e-32 | 126 |
| MS.gene053870.t1 | MTR_4g114320 | 33.562 | 292 | 167 | 8 | 11 | 295 | 125 | 396 | 3.14e-32 | 124 |
| MS.gene053870.t1 | MTR_4g114320 | 30.890 | 191 | 117 | 6 | 11 | 194 | 216 | 398 | 5.33e-17 | 81.6 |
| MS.gene053870.t1 | MTR_7g064980 | 31.650 | 297 | 178 | 9 | 13 | 294 | 29 | 315 | 2.07e-31 | 120 |
| MS.gene053870.t1 | MTR_7g064980 | 31.844 | 179 | 117 | 4 | 11 | 187 | 136 | 311 | 5.82e-18 | 83.6 |
| MS.gene053870.t1 | MTR_2g436930 | 28.896 | 308 | 188 | 10 | 14 | 293 | 20 | 324 | 2.15e-31 | 120 |
| MS.gene053870.t1 | MTR_2g436930 | 27.363 | 201 | 126 | 5 | 106 | 292 | 14 | 208 | 3.12e-15 | 75.9 |
| MS.gene053870.t1 | MTR_7g084400 | 31.469 | 286 | 172 | 9 | 14 | 293 | 218 | 485 | 2.19e-31 | 123 |
| MS.gene053870.t1 | MTR_7g084400 | 28.431 | 204 | 130 | 7 | 107 | 307 | 213 | 403 | 1.37e-11 | 65.9 |
| MS.gene053870.t1 | MTR_4g119770 | 27.419 | 310 | 192 | 10 | 14 | 293 | 19 | 325 | 3.49e-31 | 120 |
| MS.gene053870.t1 | MTR_4g119770 | 29.353 | 201 | 118 | 6 | 109 | 292 | 16 | 209 | 5.43e-16 | 78.2 |
| MS.gene053870.t1 | MTR_3g107510 | 31.359 | 287 | 176 | 8 | 11 | 293 | 124 | 393 | 3.55e-31 | 121 |
| MS.gene053870.t1 | MTR_3g107510 | 28.723 | 188 | 120 | 6 | 14 | 194 | 217 | 397 | 1.37e-15 | 77.4 |
| MS.gene053870.t1 | MTR_1g012030 | 33.099 | 284 | 167 | 10 | 16 | 294 | 146 | 411 | 1.28e-30 | 120 |
| MS.gene053870.t1 | MTR_8g066975 | 30.851 | 282 | 173 | 9 | 25 | 293 | 24 | 296 | 2.38e-29 | 114 |
| MS.gene053870.t1 | MTR_8g066975 | 31.694 | 183 | 107 | 9 | 18 | 187 | 116 | 293 | 2.17e-11 | 64.3 |
| MS.gene053870.t1 | MTR_7g068340 | 27.698 | 278 | 176 | 7 | 21 | 293 | 99 | 356 | 5.09e-29 | 115 |
| MS.gene053870.t1 | MTR_6g091800 | 28.231 | 294 | 188 | 8 | 13 | 293 | 23 | 306 | 5.67e-29 | 114 |
| MS.gene053870.t1 | MTR_6g091800 | 31.122 | 196 | 119 | 6 | 106 | 291 | 18 | 207 | 1.20e-13 | 71.2 |
| MS.gene053870.t1 | MTR_6g091800 | 27.000 | 200 | 130 | 6 | 13 | 199 | 119 | 315 | 3.40e-12 | 66.6 |
| MS.gene053870.t1 | MTR_5g081910 | 26.349 | 315 | 197 | 6 | 25 | 308 | 24 | 334 | 7.62e-29 | 114 |
| MS.gene053870.t1 | MTR_3g104600 | 26.471 | 306 | 179 | 11 | 16 | 293 | 42 | 329 | 8.08e-29 | 114 |
| MS.gene053870.t1 | MTR_5g030530 | 29.492 | 295 | 190 | 9 | 10 | 293 | 9 | 296 | 1.78e-28 | 112 |
| MS.gene053870.t1 | MTR_1g090330 | 27.622 | 286 | 194 | 8 | 13 | 292 | 18 | 296 | 7.40e-28 | 110 |
| MS.gene053870.t1 | MTR_1g036280 | 26.936 | 297 | 164 | 7 | 47 | 294 | 64 | 356 | 4.36e-27 | 110 |
| MS.gene053870.t1 | MTR_3g104500 | 27.632 | 304 | 197 | 7 | 3 | 293 | 28 | 321 | 1.29e-26 | 107 |
| MS.gene053870.t1 | MTR_4g057850 | 27.174 | 276 | 192 | 6 | 11 | 283 | 24 | 293 | 1.76e-26 | 107 |
| MS.gene053870.t1 | MTR_6g034145 | 28.405 | 257 | 163 | 7 | 50 | 293 | 4 | 252 | 6.40e-26 | 104 |
| MS.gene053870.t1 | MTR_6g034145 | 26.000 | 200 | 132 | 5 | 13 | 199 | 65 | 261 | 4.63e-11 | 62.8 |
| MS.gene053870.t1 | MTR_6g091800 | 26.183 | 317 | 187 | 8 | 14 | 293 | 24 | 330 | 2.09e-25 | 104 |
| MS.gene053870.t1 | MTR_4g016730 | 27.243 | 301 | 173 | 10 | 21 | 304 | 101 | 372 | 3.97e-25 | 104 |
| MS.gene053870.t1 | MTR_3g025800 | 27.129 | 317 | 190 | 11 | 14 | 298 | 29 | 336 | 1.54e-24 | 102 |
| MS.gene053870.t1 | MTR_8g092080 | 31.010 | 287 | 159 | 10 | 16 | 298 | 59 | 310 | 1.20e-23 | 99.8 |
| MS.gene053870.t1 | MTR_8g092080 | 32.973 | 185 | 108 | 6 | 16 | 196 | 139 | 311 | 6.72e-14 | 72.0 |
| MS.gene053870.t1 | MTR_5g081150 | 30.717 | 293 | 180 | 8 | 14 | 293 | 39 | 321 | 2.05e-23 | 99.4 |
| MS.gene053870.t1 | MTR_5g081150 | 34.807 | 181 | 113 | 4 | 14 | 192 | 146 | 323 | 5.16e-15 | 75.1 |
| MS.gene053870.t1 | MTR_5g081150 | 26.977 | 215 | 139 | 5 | 88 | 292 | 15 | 221 | 7.89e-15 | 74.7 |
| MS.gene053870.t1 | MTR_6g092210 | 26.693 | 251 | 169 | 7 | 50 | 293 | 4 | 246 | 2.42e-22 | 94.7 |
| MS.gene053870.t1 | MTR_5g081910 | 26.582 | 237 | 152 | 3 | 92 | 308 | 26 | 260 | 3.69e-22 | 94.4 |
| MS.gene053870.t1 | MTR_5g073040 | 28.472 | 288 | 187 | 7 | 11 | 293 | 41 | 314 | 9.30e-22 | 94.7 |
| MS.gene053870.t1 | MTR_5g073040 | 29.442 | 197 | 120 | 7 | 107 | 300 | 39 | 219 | 7.52e-12 | 65.9 |
| MS.gene053870.t1 | MTR_4g012850 | 25.979 | 281 | 176 | 7 | 25 | 293 | 32 | 292 | 1.42e-21 | 93.6 |
| MS.gene053870.t1 | MTR_4g012850 | 31.579 | 190 | 121 | 6 | 16 | 200 | 117 | 302 | 1.68e-19 | 87.8 |
| MS.gene053870.t1 | MTR_1g097890 | 26.689 | 296 | 176 | 9 | 14 | 304 | 56 | 315 | 6.11e-21 | 92.0 |
| MS.gene053870.t1 | MTR_4g119770 | 27.984 | 243 | 148 | 8 | 14 | 232 | 19 | 258 | 1.23e-20 | 90.1 |
| MS.gene053870.t1 | MTR_4g119770 | 29.353 | 201 | 118 | 6 | 109 | 292 | 16 | 209 | 1.50e-16 | 78.6 |
| MS.gene053870.t1 | MTR_8g098240 | 29.825 | 285 | 173 | 10 | 12 | 289 | 319 | 583 | 2.25e-20 | 92.4 |
| MS.gene053870.t1 | MTR_6g091800 | 25.166 | 302 | 179 | 8 | 14 | 278 | 24 | 315 | 6.36e-20 | 89.4 |
| MS.gene053870.t1 | MTR_3g100570 | 26.452 | 310 | 190 | 8 | 13 | 293 | 10 | 310 | 7.25e-20 | 89.0 |
| MS.gene053870.t1 | MTR_4g018750 | 26.370 | 292 | 185 | 9 | 17 | 292 | 19 | 296 | 9.03e-20 | 88.6 |
| MS.gene053870.t1 | MTR_4g018750 | 29.775 | 178 | 114 | 5 | 16 | 189 | 126 | 296 | 4.33e-11 | 63.5 |
| MS.gene053870.t1 | MTR_6g091800 | 27.897 | 233 | 146 | 7 | 13 | 232 | 23 | 246 | 1.42e-19 | 87.4 |
| MS.gene053870.t1 | MTR_6g091800 | 31.122 | 196 | 119 | 6 | 106 | 291 | 18 | 207 | 6.29e-14 | 71.2 |
| MS.gene053870.t1 | MTR_6g091800 | 27.897 | 233 | 146 | 7 | 13 | 232 | 23 | 246 | 1.94e-19 | 87.0 |
| MS.gene053870.t1 | MTR_6g091800 | 31.122 | 196 | 119 | 6 | 106 | 291 | 18 | 207 | 6.37e-14 | 71.2 |
| MS.gene053870.t1 | MTR_7g066690 | 27.723 | 303 | 173 | 12 | 17 | 295 | 21 | 301 | 3.36e-19 | 87.0 |
| MS.gene053870.t1 | MTR_7g066690 | 24.171 | 211 | 136 | 4 | 99 | 295 | 9 | 209 | 8.47e-11 | 62.4 |
| MS.gene053870.t1 | MTR_4g088545 | 29.570 | 186 | 127 | 3 | 106 | 289 | 11 | 194 | 5.48e-19 | 85.9 |
| MS.gene053870.t1 | MTR_4g088545 | 29.570 | 186 | 127 | 3 | 106 | 289 | 11 | 194 | 6.90e-19 | 84.7 |
| MS.gene053870.t1 | MTR_4g088545 | 29.570 | 186 | 127 | 3 | 106 | 289 | 11 | 194 | 1.26e-18 | 85.5 |
| MS.gene053870.t1 | MTR_4g088545 | 24.028 | 283 | 191 | 10 | 25 | 293 | 28 | 300 | 4.64e-11 | 63.2 |
| MS.gene053870.t1 | MTR_5g032420 | 27.160 | 324 | 191 | 10 | 9 | 293 | 2 | 319 | 1.35e-18 | 85.5 |
| MS.gene053870.t1 | MTR_2g032610 | 26.490 | 302 | 188 | 12 | 10 | 289 | 26 | 315 | 5.72e-18 | 83.6 |
| MS.gene053870.t1 | MTR_1g088995 | 27.055 | 292 | 189 | 9 | 7 | 291 | 31 | 305 | 7.53e-18 | 83.2 |
| MS.gene053870.t1 | MTR_6g015860 | 25.614 | 285 | 189 | 8 | 25 | 295 | 33 | 308 | 8.52e-18 | 83.2 |
| MS.gene053870.t1 | MTR_6g015860 | 28.507 | 221 | 136 | 6 | 99 | 306 | 9 | 220 | 5.13e-15 | 75.1 |
| MS.gene053870.t1 | MTR_6g015860 | 29.947 | 187 | 115 | 5 | 20 | 195 | 130 | 311 | 6.80e-13 | 68.9 |
| MS.gene053870.t1 | MTR_2g436930 | 26.695 | 236 | 154 | 9 | 74 | 293 | 2 | 234 | 9.04e-18 | 81.6 |
| MS.gene053870.t1 | MTR_2g436930 | 30.964 | 197 | 111 | 6 | 8 | 184 | 37 | 228 | 4.94e-17 | 79.7 |
| MS.gene053870.t1 | MTR_4g005330 | 27.063 | 303 | 186 | 10 | 11 | 294 | 2 | 288 | 1.48e-17 | 82.0 |
| MS.gene053870.t1 | MTR_4g005330 | 27.365 | 296 | 180 | 10 | 11 | 287 | 68 | 347 | 1.80e-17 | 82.8 |
| MS.gene053870.t1 | MTR_3g074490 | 27.541 | 305 | 184 | 7 | 7 | 289 | 110 | 399 | 2.08e-17 | 82.8 |
| MS.gene053870.t1 | MTR_3g462140 | 27.703 | 296 | 175 | 9 | 17 | 291 | 19 | 296 | 3.46e-17 | 81.3 |
| MS.gene053870.t1 | MTR_6g034515 | 27.437 | 277 | 173 | 11 | 21 | 287 | 77 | 335 | 4.35e-17 | 81.6 |
| MS.gene053870.t1 | MTR_6g034515 | 30.769 | 169 | 99 | 6 | 122 | 289 | 82 | 233 | 4.99e-14 | 72.8 |
| MS.gene053870.t1 | MTR_6g034515 | 30.570 | 193 | 117 | 5 | 18 | 199 | 169 | 355 | 1.18e-13 | 71.6 |
| MS.gene053870.t1 | MTR_2g102010 | 27.778 | 288 | 163 | 11 | 25 | 293 | 33 | 294 | 1.27e-16 | 79.7 |
| MS.gene053870.t1 | MTR_2g102010 | 35.673 | 171 | 97 | 7 | 22 | 184 | 123 | 288 | 5.80e-15 | 74.7 |
| MS.gene053870.t1 | MTR_7g015870 | 26.621 | 293 | 176 | 11 | 25 | 295 | 41 | 316 | 5.76e-16 | 77.8 |
| MS.gene053870.t1 | MTR_7g015870 | 25.455 | 220 | 149 | 5 | 100 | 312 | 18 | 229 | 1.29e-11 | 65.1 |
| MS.gene053870.t1 | MTR_7g015870 | 29.341 | 167 | 104 | 4 | 18 | 174 | 135 | 297 | 4.40e-11 | 63.5 |
| MS.gene053870.t1 | MTR_6g091910 | 27.778 | 198 | 126 | 5 | 106 | 293 | 18 | 208 | 1.25e-15 | 75.1 |
| MS.gene053870.t1 | MTR_5g081150 | 26.977 | 215 | 139 | 5 | 88 | 292 | 15 | 221 | 1.78e-15 | 75.5 |
| MS.gene053870.t1 | MTR_5g081150 | 32.547 | 212 | 126 | 7 | 14 | 211 | 39 | 247 | 2.25e-11 | 63.5 |
| MS.gene053870.t1 | MTR_5g081150 | 26.977 | 215 | 139 | 5 | 88 | 292 | 15 | 221 | 1.89e-15 | 75.5 |
| MS.gene053870.t1 | MTR_5g081150 | 32.258 | 217 | 130 | 7 | 14 | 216 | 39 | 252 | 1.25e-11 | 64.7 |
| MS.gene053870.t1 | MTR_7g084400 | 30.622 | 209 | 133 | 6 | 14 | 218 | 212 | 412 | 2.08e-15 | 77.0 |
| MS.gene053870.t1 | MTR_7g084400 | 28.426 | 197 | 127 | 6 | 107 | 300 | 207 | 392 | 1.18e-11 | 65.9 |
| MS.gene053870.t1 | MTR_7g117030 | 25.633 | 316 | 181 | 12 | 18 | 289 | 26 | 331 | 4.32e-15 | 75.5 |
| MS.gene053870.t1 | MTR_7g117030 | 27.111 | 225 | 133 | 6 | 100 | 293 | 10 | 234 | 6.67e-13 | 69.3 |
| MS.gene053870.t1 | MTR_6g033280 | 26.562 | 256 | 161 | 11 | 14 | 253 | 64 | 308 | 7.88e-15 | 75.1 |
| MS.gene053870.t1 | MTR_8g068890 | 28.165 | 316 | 191 | 12 | 9 | 293 | 2 | 312 | 9.54e-15 | 74.3 |
| MS.gene053870.t1 | MTR_4g094578 | 28.497 | 193 | 126 | 5 | 107 | 297 | 29 | 211 | 1.13e-14 | 74.3 |
| MS.gene053870.t1 | MTR_8g090210 | 25.828 | 302 | 187 | 10 | 10 | 289 | 107 | 393 | 1.32e-14 | 74.7 |
| MS.gene053870.t1 | MTR_8g090210 | 30.319 | 188 | 100 | 6 | 25 | 190 | 219 | 397 | 2.77e-14 | 73.6 |
| MS.gene053870.t1 | MTR_7g015870 | 26.298 | 289 | 174 | 11 | 25 | 291 | 37 | 308 | 1.52e-14 | 73.9 |
| MS.gene053870.t1 | MTR_7g015870 | 25.472 | 212 | 143 | 5 | 108 | 312 | 22 | 225 | 1.73e-11 | 64.7 |
| MS.gene053870.t1 | MTR_7g015870 | 29.341 | 167 | 104 | 4 | 18 | 174 | 131 | 293 | 8.89e-11 | 62.8 |
| MS.gene053870.t1 | MTR_1g105410 | 24.918 | 305 | 193 | 7 | 7 | 291 | 9 | 297 | 5.05e-14 | 72.4 |
| MS.gene053870.t1 | MTR_4g018750 | 25.483 | 259 | 163 | 9 | 17 | 259 | 19 | 263 | 7.82e-14 | 71.2 |
| MS.gene053870.t1 | MTR_8g019480 | 26.471 | 306 | 176 | 9 | 25 | 292 | 49 | 343 | 3.91e-13 | 70.1 |
| MS.gene053870.t1 | MTR_8g019480 | 29.187 | 209 | 115 | 6 | 17 | 192 | 138 | 346 | 5.59e-12 | 66.6 |
| MS.gene053870.t1 | MTR_8g099910 | 26.471 | 238 | 153 | 9 | 23 | 249 | 87 | 313 | 2.37e-12 | 67.8 |
| MS.gene053870.t1 | MTR_8g076740 | 25.806 | 217 | 105 | 4 | 16 | 187 | 16 | 221 | 6.85e-12 | 65.9 |
| MS.gene053870.t1 | MTR_6g091800 | 27.273 | 165 | 106 | 4 | 13 | 166 | 23 | 184 | 1.58e-11 | 63.2 |
| MS.gene053870.t1 | MTR_7g083790 | 28.846 | 208 | 125 | 8 | 103 | 304 | 82 | 272 | 1.74e-11 | 65.1 |
| MS.gene053870.t1 | MTR_8g107270 | 21.523 | 302 | 209 | 11 | 18 | 304 | 27 | 315 | 2.05e-11 | 64.3 |
| MS.gene053870.t1 | MTR_8g086070 | 24.324 | 296 | 191 | 12 | 7 | 292 | 23 | 295 | 3.48e-11 | 63.5 |
| MS.gene053870.t1 | MTR_5g039730 | 25.850 | 294 | 194 | 7 | 9 | 289 | 11 | 293 | 5.96e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053870.t1 | AT1G25380 | 63.473 | 334 | 101 | 6 | 21 | 336 | 33 | 363 | 1.72e-143 | 410 |
| MS.gene053870.t1 | AT1G25380 | 63.473 | 334 | 101 | 6 | 21 | 336 | 33 | 363 | 1.72e-143 | 410 |
| MS.gene053870.t1 | AT2G47490 | 65.263 | 285 | 90 | 3 | 21 | 301 | 29 | 308 | 3.68e-129 | 372 |
| MS.gene053870.t1 | AT5G66380 | 35.179 | 307 | 178 | 6 | 1 | 293 | 1 | 300 | 1.17e-51 | 174 |
| MS.gene053870.t1 | AT4G01100 | 32.680 | 306 | 172 | 9 | 14 | 293 | 47 | 344 | 1.11e-36 | 135 |
| MS.gene053870.t1 | AT4G01100 | 28.788 | 198 | 131 | 5 | 106 | 298 | 41 | 233 | 2.94e-14 | 73.2 |
| MS.gene053870.t1 | AT4G01100 | 32.781 | 302 | 169 | 9 | 18 | 293 | 1 | 294 | 6.32e-36 | 132 |
| MS.gene053870.t1 | AT4G01100 | 28.421 | 190 | 118 | 3 | 16 | 187 | 102 | 291 | 7.80e-16 | 77.4 |
| MS.gene053870.t1 | AT4G01100 | 29.282 | 181 | 118 | 5 | 123 | 298 | 8 | 183 | 2.01e-12 | 67.4 |
| MS.gene053870.t1 | AT5G46800 | 31.507 | 292 | 179 | 8 | 11 | 288 | 10 | 294 | 6.26e-35 | 129 |
| MS.gene053870.t1 | AT5G46800 | 26.702 | 191 | 126 | 6 | 114 | 293 | 15 | 202 | 8.10e-12 | 65.5 |
| MS.gene053870.t1 | AT5G46800 | 31.507 | 292 | 179 | 8 | 11 | 288 | 10 | 294 | 6.26e-35 | 129 |
| MS.gene053870.t1 | AT5G46800 | 26.702 | 191 | 126 | 6 | 114 | 293 | 15 | 202 | 8.10e-12 | 65.5 |
| MS.gene053870.t1 | AT5G46800 | 31.507 | 292 | 179 | 8 | 11 | 288 | 10 | 294 | 6.26e-35 | 129 |
| MS.gene053870.t1 | AT5G46800 | 26.702 | 191 | 126 | 6 | 114 | 293 | 15 | 202 | 8.10e-12 | 65.5 |
| MS.gene053870.t1 | AT4G01100 | 31.875 | 320 | 170 | 10 | 14 | 293 | 47 | 358 | 1.96e-34 | 130 |
| MS.gene053870.t1 | AT4G01100 | 26.887 | 212 | 131 | 5 | 106 | 298 | 41 | 247 | 2.86e-12 | 67.4 |
| MS.gene053870.t1 | AT3G53940 | 30.897 | 301 | 178 | 9 | 14 | 298 | 78 | 364 | 7.79e-32 | 122 |
| MS.gene053870.t1 | AT3G53940 | 31.250 | 208 | 130 | 7 | 103 | 303 | 69 | 270 | 7.52e-18 | 84.0 |
| MS.gene053870.t1 | AT3G53940 | 30.890 | 191 | 119 | 5 | 11 | 195 | 182 | 365 | 1.20e-17 | 83.6 |
| MS.gene053870.t1 | AT5G48970 | 27.974 | 311 | 190 | 9 | 14 | 293 | 27 | 334 | 4.45e-31 | 120 |
| MS.gene053870.t1 | AT5G48970 | 30.049 | 203 | 120 | 6 | 107 | 293 | 20 | 216 | 8.90e-17 | 80.5 |
| MS.gene053870.t1 | AT3G51870 | 27.698 | 278 | 176 | 7 | 21 | 293 | 103 | 360 | 7.93e-31 | 120 |
| MS.gene053870.t1 | AT2G37890 | 31.757 | 296 | 175 | 9 | 14 | 294 | 50 | 333 | 1.31e-30 | 119 |
| MS.gene053870.t1 | AT2G37890 | 31.694 | 183 | 112 | 5 | 11 | 187 | 154 | 329 | 4.55e-19 | 87.0 |
| MS.gene053870.t1 | AT2G39970 | 27.211 | 294 | 173 | 8 | 25 | 283 | 24 | 311 | 8.92e-30 | 116 |
| MS.gene053870.t1 | AT4G26180 | 27.532 | 316 | 203 | 7 | 13 | 316 | 25 | 326 | 2.15e-29 | 115 |
| MS.gene053870.t1 | AT4G26180 | 28.934 | 197 | 122 | 6 | 106 | 291 | 20 | 209 | 6.14e-15 | 75.1 |
| MS.gene053870.t1 | AT5G01340 | 26.689 | 296 | 209 | 7 | 10 | 302 | 18 | 308 | 2.50e-27 | 109 |
| MS.gene053870.t1 | AT4G32400 | 29.720 | 286 | 182 | 7 | 11 | 293 | 116 | 385 | 2.67e-27 | 110 |
| MS.gene053870.t1 | AT1G14140 | 27.972 | 286 | 184 | 8 | 13 | 287 | 20 | 294 | 3.12e-27 | 109 |
| MS.gene053870.t1 | AT5G61810 | 31.119 | 286 | 170 | 11 | 13 | 293 | 69 | 332 | 8.70e-27 | 108 |
| MS.gene053870.t1 | AT3G55640 | 29.352 | 293 | 186 | 8 | 13 | 293 | 42 | 325 | 1.15e-26 | 108 |
| MS.gene053870.t1 | AT3G55640 | 28.111 | 217 | 139 | 6 | 93 | 302 | 29 | 235 | 8.38e-20 | 89.4 |
| MS.gene053870.t1 | AT3G55640 | 29.352 | 293 | 186 | 8 | 13 | 293 | 42 | 325 | 1.15e-26 | 108 |
| MS.gene053870.t1 | AT3G55640 | 28.111 | 217 | 139 | 6 | 93 | 302 | 29 | 235 | 8.38e-20 | 89.4 |
| MS.gene053870.t1 | AT5G56450 | 26.531 | 294 | 195 | 6 | 14 | 293 | 39 | 325 | 1.15e-26 | 108 |
| MS.gene053870.t1 | AT5G01500 | 26.909 | 275 | 176 | 7 | 24 | 293 | 134 | 388 | 1.87e-26 | 108 |
| MS.gene053870.t1 | AT5G01500 | 29.609 | 179 | 106 | 5 | 121 | 293 | 133 | 297 | 1.58e-13 | 71.6 |
| MS.gene053870.t1 | AT5G61810 | 31.119 | 286 | 170 | 11 | 14 | 294 | 213 | 476 | 2.70e-26 | 109 |
| MS.gene053870.t1 | AT5G48970 | 27.444 | 266 | 171 | 8 | 47 | 293 | 1 | 263 | 5.74e-26 | 105 |
| MS.gene053870.t1 | AT5G51050 | 29.932 | 294 | 180 | 9 | 7 | 293 | 221 | 495 | 7.49e-26 | 108 |
| MS.gene053870.t1 | AT4G39460 | 31.399 | 293 | 162 | 10 | 16 | 306 | 65 | 320 | 1.97e-25 | 104 |
| MS.gene053870.t1 | AT4G39460 | 32.323 | 198 | 119 | 6 | 8 | 200 | 134 | 321 | 5.99e-14 | 72.0 |
| MS.gene053870.t1 | AT4G39460 | 31.399 | 293 | 162 | 10 | 16 | 306 | 65 | 320 | 1.97e-25 | 104 |
| MS.gene053870.t1 | AT4G39460 | 32.323 | 198 | 119 | 6 | 8 | 200 | 134 | 321 | 5.99e-14 | 72.0 |
| MS.gene053870.t1 | AT4G39460 | 31.399 | 293 | 162 | 10 | 16 | 306 | 65 | 320 | 1.97e-25 | 104 |
| MS.gene053870.t1 | AT4G39460 | 32.323 | 198 | 119 | 6 | 8 | 200 | 134 | 321 | 5.99e-14 | 72.0 |
| MS.gene053870.t1 | AT3G21390 | 25.243 | 309 | 198 | 8 | 10 | 288 | 20 | 325 | 2.06e-25 | 104 |
| MS.gene053870.t1 | AT3G21390 | 30.049 | 203 | 117 | 7 | 107 | 292 | 16 | 210 | 6.66e-16 | 78.2 |
| MS.gene053870.t1 | AT3G21390 | 28.019 | 207 | 122 | 5 | 3 | 184 | 120 | 324 | 1.61e-14 | 73.9 |
| MS.gene053870.t1 | AT3G21390 | 25.243 | 309 | 198 | 8 | 10 | 288 | 42 | 347 | 3.65e-25 | 104 |
| MS.gene053870.t1 | AT3G21390 | 30.049 | 203 | 117 | 7 | 107 | 292 | 38 | 232 | 7.98e-16 | 77.8 |
| MS.gene053870.t1 | AT3G21390 | 28.019 | 207 | 122 | 5 | 3 | 184 | 142 | 346 | 1.75e-14 | 73.9 |
| MS.gene053870.t1 | AT5G07320 | 29.496 | 278 | 171 | 10 | 18 | 291 | 218 | 474 | 6.94e-25 | 105 |
| MS.gene053870.t1 | AT1G34065 | 28.819 | 288 | 164 | 9 | 13 | 295 | 79 | 330 | 1.19e-23 | 100 |
| MS.gene053870.t1 | AT1G34065 | 28.819 | 288 | 164 | 9 | 13 | 295 | 86 | 337 | 1.57e-23 | 99.8 |
| MS.gene053870.t1 | AT3G20240 | 27.703 | 296 | 179 | 9 | 11 | 287 | 54 | 333 | 2.71e-23 | 99.4 |
| MS.gene053870.t1 | AT1G74240 | 27.778 | 306 | 179 | 9 | 13 | 289 | 40 | 332 | 4.58e-23 | 99.0 |
| MS.gene053870.t1 | AT4G26180 | 26.545 | 275 | 182 | 5 | 13 | 275 | 25 | 291 | 7.94e-23 | 97.1 |
| MS.gene053870.t1 | AT4G26180 | 28.934 | 197 | 122 | 6 | 106 | 291 | 20 | 209 | 3.77e-15 | 75.1 |
| MS.gene053870.t1 | AT1G14560 | 25.914 | 301 | 198 | 8 | 21 | 305 | 39 | 330 | 3.36e-22 | 95.9 |
| MS.gene053870.t1 | AT1G14560 | 29.703 | 202 | 104 | 7 | 16 | 190 | 130 | 320 | 5.80e-11 | 63.2 |
| MS.gene053870.t1 | AT1G74240 | 27.891 | 294 | 170 | 9 | 25 | 289 | 4 | 284 | 8.61e-22 | 94.4 |
| MS.gene053870.t1 | AT5G58970 | 28.197 | 305 | 179 | 10 | 14 | 297 | 17 | 302 | 9.40e-22 | 94.4 |
| MS.gene053870.t1 | AT5G58970 | 23.980 | 196 | 141 | 3 | 100 | 289 | 9 | 202 | 1.71e-11 | 64.7 |
| MS.gene053870.t1 | AT4G11440 | 28.710 | 310 | 176 | 12 | 12 | 303 | 329 | 611 | 1.57e-20 | 93.2 |
| MS.gene053870.t1 | AT4G11440 | 39.759 | 83 | 50 | 0 | 10 | 92 | 521 | 603 | 2.50e-11 | 65.1 |
| MS.gene053870.t1 | AT4G11440 | 28.710 | 310 | 176 | 12 | 12 | 303 | 329 | 611 | 1.57e-20 | 93.2 |
| MS.gene053870.t1 | AT4G11440 | 39.759 | 83 | 50 | 0 | 10 | 92 | 521 | 603 | 2.50e-11 | 65.1 |
| MS.gene053870.t1 | AT3G55640 | 28.111 | 217 | 139 | 6 | 93 | 302 | 29 | 235 | 2.26e-20 | 89.4 |
| MS.gene053870.t1 | AT3G55640 | 30.734 | 218 | 132 | 7 | 14 | 216 | 43 | 256 | 3.28e-15 | 74.7 |
| MS.gene053870.t1 | AT3G55640 | 28.111 | 217 | 139 | 6 | 93 | 302 | 29 | 235 | 2.26e-20 | 89.4 |
| MS.gene053870.t1 | AT3G55640 | 30.734 | 218 | 132 | 7 | 14 | 216 | 43 | 256 | 3.28e-15 | 74.7 |
| MS.gene053870.t1 | AT4G03115 | 28.623 | 276 | 174 | 10 | 17 | 287 | 46 | 303 | 3.95e-20 | 89.7 |
| MS.gene053870.t1 | AT4G03115 | 28.623 | 276 | 174 | 10 | 17 | 287 | 78 | 335 | 5.37e-20 | 89.7 |
| MS.gene053870.t1 | AT3G54110 | 26.552 | 290 | 175 | 9 | 23 | 293 | 27 | 297 | 3.17e-19 | 87.0 |
| MS.gene053870.t1 | AT5G64970 | 27.152 | 302 | 183 | 9 | 10 | 289 | 132 | 418 | 1.50e-18 | 86.7 |
| MS.gene053870.t1 | AT3G53940 | 31.250 | 208 | 130 | 7 | 103 | 303 | 69 | 270 | 2.87e-18 | 84.3 |
| MS.gene053870.t1 | AT3G53940 | 31.905 | 210 | 121 | 6 | 14 | 207 | 78 | 281 | 2.81e-17 | 81.3 |
| MS.gene053870.t1 | AT2G30160 | 26.481 | 287 | 194 | 8 | 13 | 293 | 46 | 321 | 5.99e-18 | 84.0 |
| MS.gene053870.t1 | AT2G30160 | 27.041 | 196 | 126 | 6 | 107 | 300 | 42 | 222 | 2.97e-12 | 67.0 |
| MS.gene053870.t1 | AT5G64970 | 26.117 | 291 | 182 | 8 | 17 | 289 | 19 | 294 | 1.68e-17 | 82.0 |
| MS.gene053870.t1 | AT2G22500 | 28.378 | 296 | 176 | 8 | 25 | 293 | 22 | 308 | 2.62e-17 | 81.6 |
| MS.gene053870.t1 | AT1G72820 | 27.273 | 297 | 181 | 11 | 25 | 292 | 47 | 337 | 7.22e-17 | 80.9 |
| MS.gene053870.t1 | AT1G72820 | 27.273 | 297 | 181 | 11 | 25 | 292 | 47 | 337 | 7.22e-17 | 80.9 |
| MS.gene053870.t1 | AT1G07030 | 27.336 | 289 | 186 | 9 | 13 | 293 | 44 | 316 | 2.15e-16 | 79.3 |
| MS.gene053870.t1 | AT1G07030 | 27.885 | 208 | 130 | 7 | 94 | 299 | 30 | 219 | 8.71e-14 | 71.6 |
| MS.gene053870.t1 | AT3G05290 | 24.342 | 304 | 192 | 8 | 7 | 289 | 9 | 295 | 2.17e-16 | 79.3 |
| MS.gene053870.t1 | AT1G78180 | 26.846 | 298 | 181 | 9 | 12 | 287 | 127 | 409 | 2.63e-16 | 79.7 |
| MS.gene053870.t1 | AT1G14560 | 27.064 | 218 | 136 | 7 | 104 | 305 | 22 | 232 | 2.75e-16 | 77.4 |
| MS.gene053870.t1 | AT1G14560 | 29.703 | 202 | 104 | 7 | 16 | 190 | 32 | 222 | 3.13e-11 | 63.2 |
| MS.gene053870.t1 | AT5G27520 | 25.413 | 303 | 190 | 7 | 7 | 289 | 11 | 297 | 6.83e-16 | 77.8 |
| MS.gene053870.t1 | AT1G14560 | 24.444 | 270 | 181 | 7 | 21 | 274 | 39 | 301 | 9.51e-16 | 77.4 |
| MS.gene053870.t1 | AT4G24570 | 26.708 | 322 | 186 | 10 | 9 | 293 | 2 | 310 | 1.95e-15 | 76.3 |
| MS.gene053870.t1 | AT5G15640 | 26.855 | 283 | 184 | 7 | 25 | 292 | 44 | 318 | 1.96e-15 | 76.6 |
| MS.gene053870.t1 | AT5G15640 | 29.744 | 195 | 121 | 6 | 108 | 293 | 29 | 216 | 1.23e-12 | 68.2 |
| MS.gene053870.t1 | AT5G19760 | 24.324 | 296 | 191 | 12 | 7 | 292 | 20 | 292 | 2.80e-15 | 75.9 |
| MS.gene053870.t1 | AT4G03115 | 27.731 | 238 | 153 | 8 | 53 | 287 | 11 | 232 | 3.37e-15 | 74.7 |
| MS.gene053870.t1 | AT4G03115 | 27.490 | 251 | 161 | 9 | 42 | 287 | 6 | 240 | 3.41e-15 | 74.7 |
| MS.gene053870.t1 | AT5G15640 | 26.855 | 283 | 184 | 7 | 25 | 292 | 37 | 311 | 3.52e-15 | 75.5 |
| MS.gene053870.t1 | AT5G15640 | 29.744 | 195 | 121 | 6 | 108 | 293 | 22 | 209 | 1.54e-12 | 67.8 |
| MS.gene053870.t1 | AT5G26200 | 25.168 | 298 | 193 | 11 | 20 | 295 | 50 | 339 | 3.90e-15 | 75.9 |
| MS.gene053870.t1 | AT2G33820 | 27.174 | 184 | 130 | 3 | 108 | 289 | 19 | 200 | 1.02e-14 | 74.3 |
| MS.gene053870.t1 | AT2G33820 | 23.746 | 299 | 172 | 11 | 25 | 293 | 34 | 306 | 8.26e-11 | 62.8 |
| MS.gene053870.t1 | AT2G33820 | 27.174 | 184 | 130 | 3 | 108 | 289 | 19 | 200 | 1.50e-14 | 73.2 |
| MS.gene053870.t1 | AT5G64970 | 26.389 | 288 | 175 | 9 | 10 | 275 | 132 | 404 | 4.55e-14 | 73.2 |
| MS.gene053870.t1 | AT1G79900 | 34.659 | 176 | 93 | 8 | 16 | 184 | 117 | 277 | 4.61e-14 | 72.0 |
| MS.gene053870.t1 | AT1G79900 | 23.875 | 289 | 173 | 9 | 25 | 298 | 32 | 288 | 2.35e-13 | 70.1 |
| MS.gene053870.t1 | AT5G09470 | 26.613 | 248 | 162 | 6 | 53 | 293 | 98 | 332 | 5.85e-14 | 72.4 |
| MS.gene053870.t1 | AT5G42130 | 25.952 | 289 | 178 | 11 | 23 | 295 | 132 | 400 | 1.14e-13 | 72.0 |
| MS.gene053870.t1 | AT5G42130 | 28.161 | 174 | 108 | 5 | 117 | 289 | 128 | 285 | 4.38e-11 | 63.9 |
| MS.gene053870.t1 | AT2G26360 | 29.500 | 200 | 114 | 7 | 104 | 297 | 108 | 286 | 5.92e-13 | 69.7 |
| MS.gene053870.t1 | AT2G26360 | 28.571 | 196 | 128 | 5 | 4 | 198 | 200 | 384 | 4.19e-11 | 63.9 |
| MS.gene053870.t1 | AT5G17400 | 25.087 | 287 | 177 | 13 | 25 | 291 | 30 | 298 | 6.44e-13 | 68.9 |
| MS.gene053870.t1 | AT5G58970 | 31.937 | 191 | 109 | 7 | 14 | 187 | 17 | 203 | 6.62e-13 | 68.6 |
| MS.gene053870.t1 | AT5G58970 | 23.980 | 196 | 141 | 3 | 100 | 289 | 9 | 202 | 1.31e-11 | 64.7 |
| MS.gene053870.t1 | AT4G03115 | 29.670 | 182 | 114 | 6 | 17 | 195 | 46 | 216 | 2.20e-12 | 66.2 |
| MS.gene053870.t1 | AT4G03115 | 29.670 | 182 | 114 | 6 | 17 | 195 | 46 | 216 | 2.43e-12 | 66.2 |
| MS.gene053870.t1 | AT2G33820 | 26.042 | 192 | 130 | 4 | 108 | 289 | 19 | 208 | 3.31e-12 | 67.0 |
| MS.gene053870.t1 | AT3G48850 | 25.726 | 241 | 159 | 7 | 18 | 248 | 80 | 310 | 9.65e-12 | 65.9 |
Find 81 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGACTAGTACCAGAATTT+TGG | 0.187273 | 5.1:+43472546 | None:intergenic |
| ATGTCACTGGCTTCTGGTTT+GGG | 0.224008 | 5.1:+43468607 | None:intergenic |
| AATGTCACTGGCTTCTGGTT+TGG | 0.260255 | 5.1:+43468606 | None:intergenic |
| GCTTCTGGTTTGGGTTTGTT+AGG | 0.271427 | 5.1:+43468616 | None:intergenic |
| GTATCAATGTCACTGGCTTC+TGG | 0.274744 | 5.1:+43468601 | None:intergenic |
| CTTGGCCTTGCTCTTGCAGC+CGG | 0.278684 | 5.1:+43468833 | None:intergenic |
| GTTTCAAAAGGAAGGCATTA+AGG | 0.283420 | 5.1:-43468755 | MS.gene053870:CDS |
| TACTAGCATTGCTTCCAAAC+TGG | 0.300230 | 5.1:-43471217 | MS.gene053870:CDS |
| CACATGTTATGAGCAAATAA+AGG | 0.308068 | 5.1:-43470415 | MS.gene053870:CDS |
| AGTAACAATTGCCAAAATTC+TGG | 0.308098 | 5.1:-43472557 | MS.gene053870:CDS |
| TAGTTAGGACTGAAGGCTTC+AGG | 0.315074 | 5.1:-43471268 | MS.gene053870:CDS |
| GGTTATTGACTGTACTAAAA+AGG | 0.334111 | 5.1:-43468779 | MS.gene053870:CDS |
| TGCAACGAACTCACAACTAT+TGG | 0.353973 | 5.1:-43470121 | MS.gene053870:CDS |
| AAGAAACTCACTGCCCAGTT+TGG | 0.384063 | 5.1:+43471203 | None:intergenic |
| ATTATAGCTGCTGCTGGAGC+TGG | 0.390966 | 5.1:-43470094 | MS.gene053870:CDS |
| CCTGTGTATCATCTCATAAC+TGG | 0.398805 | 5.1:+43468669 | None:intergenic |
| AGGAATCTTGTTAGATTGAG+AGG | 0.400460 | 5.1:+43468546 | None:intergenic |
| TTTCAAAAGGAAGGCATTAA+GGG | 0.401936 | 5.1:-43468754 | MS.gene053870:CDS |
| ACATGTTATGAGCAAATAAA+GGG | 0.407995 | 5.1:-43470414 | MS.gene053870:CDS |
| TTGGCCTTGCTCTTGCAGCC+GGG | 0.432276 | 5.1:+43468834 | None:intergenic |
| GGAAGCAATGCTAGTATTGT+TGG | 0.437807 | 5.1:+43471224 | None:intergenic |
| CGAGCTTGCAGAATATAGTT+AGG | 0.442613 | 5.1:-43471283 | MS.gene053870:CDS |
| GGAAATATTATAGCTGCTGC+TGG | 0.450132 | 5.1:-43470100 | MS.gene053870:CDS |
| TTATAGCTGCTGCTGGAGCT+GGG | 0.465258 | 5.1:-43470093 | MS.gene053870:CDS |
| AGCAAATAAAGGGCTTGCTT+CGG | 0.465888 | 5.1:-43470404 | MS.gene053870:CDS |
| AAGACAAGGCTACAAGTTCA+TGG | 0.466450 | 5.1:-43472266 | MS.gene053870:CDS |
| CTCTTGTAAGGAACAACATT+AGG | 0.470028 | 5.1:+43469662 | None:intergenic |
| CACACGAGGTAATACGTTCC+CGG | 0.478467 | 5.1:-43468852 | MS.gene053870:CDS |
| TTGTCTTAACAACCCACAAT+GGG | 0.489947 | 5.1:+43470047 | None:intergenic |
| GCGGAGAGAAAACTCTTGTA+AGG | 0.491277 | 5.1:+43469650 | None:intergenic |
| ACTGTCGACAAGCTAAATCC+TGG | 0.492266 | 5.1:-43468931 | MS.gene053870:CDS |
| AAGGCCTACGAGGACTGTAT+AGG | 0.494032 | 5.1:-43469604 | MS.gene053870:intron |
| TGAATCAATGTCTTGTTAGC+TGG | 0.502676 | 5.1:+43468509 | None:intergenic |
| CAATATCTACAAACCCATTG+TGG | 0.505571 | 5.1:-43470060 | MS.gene053870:CDS |
| CCTATCAGACACAAGGTATG+AGG | 0.511404 | 5.1:-43469685 | MS.gene053870:intron |
| ACTAGCATTGCTTCCAAACT+GGG | 0.512047 | 5.1:-43471216 | MS.gene053870:CDS |
| TACCTTTCTGCGCAGGTGGA+AGG | 0.514579 | 5.1:+43472243 | None:intergenic |
| GTAGTGGAGTTCAATATGCC+GGG | 0.523297 | 5.1:-43468801 | MS.gene053870:CDS |
| GGAATCTTGTTAGATTGAGA+GGG | 0.526541 | 5.1:+43468547 | None:intergenic |
| AGTAGTGGAGTTCAATATGC+CGG | 0.529408 | 5.1:-43468802 | MS.gene053870:CDS |
| AATATCTACAAACCCATTGT+GGG | 0.534468 | 5.1:-43470059 | MS.gene053870:CDS |
| TATAGCTGCTGCTGGAGCTG+GGG | 0.537127 | 5.1:-43470092 | MS.gene053870:CDS |
| CAGAATATAGTTAGGACTGA+AGG | 0.537208 | 5.1:-43471275 | MS.gene053870:CDS |
| AGTTAGGACTGAAGGCTTCA+GGG | 0.541491 | 5.1:-43471267 | MS.gene053870:CDS |
| GGCCTTCCACCTGCGCAGAA+AGG | 0.542191 | 5.1:-43472245 | MS.gene053870:intron |
| GATGCGATTGCAACACTCCC+AGG | 0.543278 | 5.1:+43468913 | None:intergenic |
| ATCTTGTTAGATTGAGAGGG+TGG | 0.553108 | 5.1:+43468550 | None:intergenic |
| CAATCTAACAAGATTCCTCT+CGG | 0.562316 | 5.1:-43468541 | MS.gene053870:CDS |
| AAGGGCTTGCTTCGGTCACA+TGG | 0.563482 | 5.1:-43470396 | MS.gene053870:intron |
| CGTTCCCGGCTGCAAGAGCA+AGG | 0.565066 | 5.1:-43468838 | MS.gene053870:CDS |
| GTGAATGTAATAACAGCTGA+AGG | 0.565084 | 5.1:+43468691 | None:intergenic |
| TGCTACGTTTGTGTGTCCAT+TGG | 0.581173 | 5.1:-43472297 | MS.gene053870:CDS |
| TGACTTACGCCAGCTAATGA+AGG | 0.581206 | 5.1:+43469108 | None:intergenic |
| ATAGCTGCTGCTGGAGCTGG+GGG | 0.581342 | 5.1:-43470091 | MS.gene053870:CDS |
| AGTGTACCTTTCTGCGCAGG+TGG | 0.581391 | 5.1:+43472239 | None:intergenic |
| CTTGTCTTAACAACCCACAA+TGG | 0.581815 | 5.1:+43470046 | None:intergenic |
| AGAAGTGTACCTTTCTGCGC+AGG | 0.582015 | 5.1:+43472236 | None:intergenic |
| ACAAGGATTACTCATGAGGA+AGG | 0.586525 | 5.1:-43469623 | MS.gene053870:CDS |
| ATGCTAGTATTGTTGGTGAA+AGG | 0.588516 | 5.1:+43471231 | None:intergenic |
| GGTACTAGTCATAATATCAG+AGG | 0.589561 | 5.1:-43472536 | MS.gene053870:intron |
| TGAAAAGATAAAGTTGTACA+TGG | 0.597783 | 5.1:-43469061 | MS.gene053870:CDS |
| AGCTGGTCTTTGTTTCCGAG+AGG | 0.606604 | 5.1:+43468526 | None:intergenic |
| CTGTCGACAAGCTAAATCCT+GGG | 0.608788 | 5.1:-43468930 | MS.gene053870:CDS |
| TTTGACAAGGATTACTCATG+AGG | 0.611557 | 5.1:-43469627 | MS.gene053870:CDS |
| GTTAGGACTGAAGGCTTCAG+GGG | 0.613173 | 5.1:-43471266 | MS.gene053870:CDS |
| TTTAGTACAGTCAATAACCC+CGG | 0.625106 | 5.1:+43468783 | None:intergenic |
| GTATTGTTGGTGAAAGGCCA+CGG | 0.628617 | 5.1:+43471237 | None:intergenic |
| ATGAGTAATCCTTGTCAAAG+CGG | 0.629314 | 5.1:+43469631 | None:intergenic |
| CCAGTTATGAGATGATACAC+AGG | 0.633814 | 5.1:-43468669 | MS.gene053870:CDS |
| CTTGTCTTGATCACATCCAA+TGG | 0.634297 | 5.1:+43472281 | None:intergenic |
| TGAATGTAATAACAGCTGAA+GGG | 0.635345 | 5.1:+43468692 | None:intergenic |
| CGGGAACGTATTACCTCGTG+TGG | 0.635476 | 5.1:+43468853 | None:intergenic |
| CATTGGATGTGATCAAGACA+AGG | 0.635762 | 5.1:-43472280 | MS.gene053870:CDS |
| CATACCTATACAGTCCTCGT+AGG | 0.652752 | 5.1:+43469600 | None:intergenic |
| GAATGTAATAACAGCTGAAG+GGG | 0.655080 | 5.1:+43468693 | None:intergenic |
| GGCTTCAGGGGATTGTACCG+TGG | 0.678352 | 5.1:-43471254 | MS.gene053870:CDS |
| ACTCATGAGGAAGGCCTACG+AGG | 0.694705 | 5.1:-43469614 | MS.gene053870:CDS |
| TAGTGGAGTTCAATATGCCG+GGG | 0.696619 | 5.1:-43468800 | MS.gene053870:CDS |
| TCTGAAACCTATCAGACACA+AGG | 0.705806 | 5.1:-43469692 | MS.gene053870:intron |
| TGTAATGACTTATCCACACG+AGG | 0.714354 | 5.1:-43468866 | MS.gene053870:CDS |
| GTGTGGATAAGTCATTACAG+AGG | 0.756308 | 5.1:+43468870 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTATTATTTTATATTGT+CGG | + | chr5.1:43471740-43471759 | None:intergenic | 10.0% |
| !! | AAATGATTAACCATAAATTA+GGG | + | chr5.1:43471509-43471528 | None:intergenic | 15.0% |
| !! | ATAATCTTCCATATATTTAT+TGG | - | chr5.1:43471166-43471185 | MS.gene053870:intron | 15.0% |
| !!! | ATTTTGTGTTTTTCTTTAAT+GGG | - | chr5.1:43468633-43468652 | MS.gene053870:CDS | 15.0% |
| !!! | ATTTTGTTTTAACTTGTATT+TGG | - | chr5.1:43471237-43471256 | MS.gene053870:CDS | 15.0% |
| !!! | TATTTTGTGTTTTTCTTTAA+TGG | - | chr5.1:43468632-43468651 | MS.gene053870:CDS | 15.0% |
| !!! | TTAAATTTAACTGATTAGTT+TGG | + | chr5.1:43471204-43471223 | None:intergenic | 15.0% |
| !!! | TTAATTTCTCACAATTTTAT+TGG | - | chr5.1:43468983-43469002 | MS.gene053870:intron | 15.0% |
| !! | AAAAAAAAAATCAGGATTTG+AGG | + | chr5.1:43470819-43470838 | None:intergenic | 20.0% |
| !! | AAAAACACAAAATACGAAAA+GGG | + | chr5.1:43468626-43468645 | None:intergenic | 20.0% |
| !! | AATTAACATCTAACATAACA+AGG | + | chr5.1:43471350-43471369 | None:intergenic | 20.0% |
| !! | ACAAAGATATTGTAAACATT+AGG | + | chr5.1:43470187-43470206 | None:intergenic | 20.0% |
| !! | AGGTTAGTAAAAAAAAAATC+AGG | + | chr5.1:43470827-43470846 | None:intergenic | 20.0% |
| !! | ATTAACATCTAACATAACAA+GGG | + | chr5.1:43471349-43471368 | None:intergenic | 20.0% |
| !! | CAAATGATTAACCATAAATT+AGG | + | chr5.1:43471510-43471529 | None:intergenic | 20.0% |
| !! | GTATTCTGTATTAAAATAGA+CGG | - | chr5.1:43471783-43471802 | MS.gene053870:intron | 20.0% |
| !! | TAAGTTTAGTACTTATTTCA+AGG | + | chr5.1:43472088-43472107 | None:intergenic | 20.0% |
| !! | TAGTAAAAAACAAAACACTT+AGG | + | chr5.1:43470855-43470874 | None:intergenic | 20.0% |
| !! | TTGTTTGCTTAATTTCATAA+TGG | - | chr5.1:43470203-43470222 | MS.gene053870:intron | 20.0% |
| !! | TTTACAGAAAAATAATCCAA+AGG | + | chr5.1:43469144-43469163 | None:intergenic | 20.0% |
| !! | TTTGTTAATATTCGTGTATA+TGG | + | chr5.1:43470048-43470067 | None:intergenic | 20.0% |
| !!! | AAAAAAAGTGAAATTTTGAG+AGG | + | chr5.1:43468661-43468680 | None:intergenic | 20.0% |
| !!! | ATGTAATTAGCTTCAAATTA+CGG | - | chr5.1:43470276-43470295 | MS.gene053870:intron | 20.0% |
| !!! | GATTAATCAATGCTTTAAAA+AGG | + | chr5.1:43470514-43470533 | None:intergenic | 20.0% |
| ! | AACAAATTCATTTCAACTGT+AGG | - | chr5.1:43470628-43470647 | MS.gene053870:intron | 25.0% |
| ! | AATGCTGAAACAAGATATAA+CGG | + | chr5.1:43470002-43470021 | None:intergenic | 25.0% |
| ! | ACATGTTATGAGCAAATAAA+GGG | - | chr5.1:43470659-43470678 | MS.gene053870:intron | 25.0% |
| ! | AGACAAAATGTAGTTAGAAA+AGG | + | chr5.1:43469904-43469923 | None:intergenic | 25.0% |
| ! | AGTACTAAACTTATTCAATG+AGG | - | chr5.1:43472095-43472114 | MS.gene053870:intron | 25.0% |
| ! | AGTGACATTGATACAAAAAA+TGG | - | chr5.1:43472481-43472500 | MS.gene053870:intron | 25.0% |
| ! | ATGACAAATAAGATTTGATG+TGG | + | chr5.1:43470114-43470133 | None:intergenic | 25.0% |
| ! | CAAATGCACCAATAAATATA+TGG | + | chr5.1:43471177-43471196 | None:intergenic | 25.0% |
| ! | GAAAAACACAAAATACGAAA+AGG | + | chr5.1:43468627-43468646 | None:intergenic | 25.0% |
| ! | GGTAAAATATGTGTGAAAAT+AGG | - | chr5.1:43471088-43471107 | MS.gene053870:intron | 25.0% |
| ! | TGAAAAGATAAAGTTGTACA+TGG | - | chr5.1:43472012-43472031 | MS.gene053870:intron | 25.0% |
| ! | TGTAATGTTGAAACTTGATT+AGG | - | chr5.1:43469227-43469246 | MS.gene053870:intron | 25.0% |
| ! | TTCAGTATGAATAAATTACG+AGG | - | chr5.1:43469701-43469720 | MS.gene053870:intron | 25.0% |
| ! | TTGAAATCAACTTGGTAAAA+TGG | + | chr5.1:43470328-43470347 | None:intergenic | 25.0% |
| !! | AACTTTATCTTTTCATATGC+TGG | + | chr5.1:43472007-43472026 | None:intergenic | 25.0% |
| !! | ACTTTATCTTTTCATATGCT+GGG | + | chr5.1:43472006-43472025 | None:intergenic | 25.0% |
| !! | CTTTTTATGACGATATTTGT+TGG | - | chr5.1:43470910-43470929 | MS.gene053870:intron | 25.0% |
| !! | TTAGCATTTTGTACCTTTTT+TGG | + | chr5.1:43472038-43472057 | None:intergenic | 25.0% |
| !!! | ATTTTACCAAGTTGATTTCA+AGG | - | chr5.1:43470327-43470346 | MS.gene053870:intron | 25.0% |
| !!! | ATTTTTTGTATCAATGTCAC+TGG | + | chr5.1:43472482-43472501 | None:intergenic | 25.0% |
| !!! | CATGTGATTTCTAAAATGTT+TGG | - | chr5.1:43468719-43468738 | MS.gene053870:CDS | 25.0% |
| !!! | CGTTATTTTTCTGAAATGAT+TGG | + | chr5.1:43471648-43471667 | None:intergenic | 25.0% |
| !!! | GGTAATTTTTTTGGTCTTTT+TGG | - | chr5.1:43468594-43468613 | MS.gene053870:CDS | 25.0% |
| !!! | TACTAAAAAGGTGTTTCAAA+AGG | - | chr5.1:43472306-43472325 | MS.gene053870:CDS | 25.0% |
| !!! | TTTTCTAGTTCCCTAATTTA+TGG | - | chr5.1:43471496-43471515 | MS.gene053870:intron | 25.0% |
| !!! | TTTTCTTCTAGTTTTGTGTT+TGG | - | chr5.1:43468677-43468696 | MS.gene053870:CDS | 25.0% |
| AATATCTACAAACCCATTGT+GGG | - | chr5.1:43471014-43471033 | MS.gene053870:intron | 30.0% | |
| ACATTGTGTGATTGTTATAG+GGG | - | chr5.1:43468746-43468765 | MS.gene053870:CDS | 30.0% | |
| ACTTCTTGTTAGTTGCTTAA+TGG | - | chr5.1:43468854-43468873 | MS.gene053870:CDS | 30.0% | |
| AGTAACAATTGCCAAAATTC+TGG | - | chr5.1:43468516-43468535 | MS.gene053870:CDS | 30.0% | |
| ATAATGAAACCTCTTTAGAC+TGG | - | chr5.1:43471753-43471772 | MS.gene053870:intron | 30.0% | |
| ATCGTCATTAAAACAGAAAG+AGG | + | chr5.1:43471271-43471290 | None:intergenic | 30.0% | |
| CACATGTTATGAGCAAATAA+AGG | - | chr5.1:43470658-43470677 | MS.gene053870:intron | 30.0% | |
| CTTCTTGTTAGTTGCTTAAT+GGG | - | chr5.1:43468855-43468874 | MS.gene053870:CDS | 30.0% | |
| GACATTGTGTGATTGTTATA+GGG | - | chr5.1:43468745-43468764 | MS.gene053870:CDS | 30.0% | |
| GATTTGATGTGGACATTATT+CGG | + | chr5.1:43470103-43470122 | None:intergenic | 30.0% | |
| GGAAATAAGTTTGACAAATC+TGG | + | chr5.1:43470785-43470804 | None:intergenic | 30.0% | |
| GTCAAACTTATTTCCAATTC+TGG | - | chr5.1:43470790-43470809 | MS.gene053870:intron | 30.0% | |
| GTCAGCGATATAAATAACAA+TGG | - | chr5.1:43471697-43471716 | MS.gene053870:intron | 30.0% | |
| TAAAAACACCTAACTCTCAA+CGG | + | chr5.1:43469178-43469197 | None:intergenic | 30.0% | |
| TACGCCATAATACAATATGA+TGG | - | chr5.1:43469436-43469455 | MS.gene053870:intron | 30.0% | |
| TATTATATTCCTTGATGCAG+TGG | - | chr5.1:43471935-43471954 | MS.gene053870:intron | 30.0% | |
| TGAATGTAATAACAGCTGAA+GGG | + | chr5.1:43472384-43472403 | None:intergenic | 30.0% | |
| TGACATTGTGTGATTGTTAT+AGG | - | chr5.1:43468744-43468763 | MS.gene053870:CDS | 30.0% | |
| TGTTCTGTGAAATAGAAGTT+TGG | - | chr5.1:43469957-43469976 | MS.gene053870:intron | 30.0% | |
| TTATATTGTCGGTCCAAATT+TGG | + | chr5.1:43471729-43471748 | None:intergenic | 30.0% | |
| TTTAGACCTTGAAATCAACT+TGG | + | chr5.1:43470336-43470355 | None:intergenic | 30.0% | |
| TTTCATCTCAAAATGTGAAG+TGG | - | chr5.1:43470740-43470759 | MS.gene053870:intron | 30.0% | |
| ! | ACAGAAACCAGATTATTTTC+TGG | - | chr5.1:43471845-43471864 | MS.gene053870:intron | 30.0% |
| ! | ACTACATTTTGTCTTGTGAT+TGG | - | chr5.1:43469910-43469929 | MS.gene053870:intron | 30.0% |
| ! | ATTTGTTAGTTTACTGCCTT+TGG | - | chr5.1:43469125-43469144 | MS.gene053870:intron | 30.0% |
| ! | CAGATCTTGAGTATATTTTC+TGG | - | chr5.1:43470879-43470898 | MS.gene053870:intron | 30.0% |
| ! | GGTTATTGACTGTACTAAAA+AGG | - | chr5.1:43472294-43472313 | MS.gene053870:CDS | 30.0% |
| ! | TATGACTAGTACCAGAATTT+TGG | + | chr5.1:43468530-43468549 | None:intergenic | 30.0% |
| !! | AAAAAGGTGTTTCAAAAGGA+AGG | - | chr5.1:43472310-43472329 | MS.gene053870:CDS | 30.0% |
| !! | TGCTTTAAAAAGGATCTTCA+TGG | + | chr5.1:43470504-43470523 | None:intergenic | 30.0% |
| !! | TTTCAAAAGGAAGGCATTAA+GGG | - | chr5.1:43472319-43472338 | MS.gene053870:intron | 30.0% |
| !! | TTTCTGAAATGATTGGATAG+AGG | + | chr5.1:43471641-43471660 | None:intergenic | 30.0% |
| !!! | TCTTGGGTACTTTAGTTTTA+TGG | - | chr5.1:43470300-43470319 | MS.gene053870:intron | 30.0% |
| AAAATGTGAAGTGGAGAGTT+TGG | - | chr5.1:43470749-43470768 | MS.gene053870:intron | 35.0% | |
| AAATGTGAAGTGGAGAGTTT+GGG | - | chr5.1:43470750-43470769 | MS.gene053870:intron | 35.0% | |
| AACAAAACACTTAGGATCTG+AGG | + | chr5.1:43470847-43470866 | None:intergenic | 35.0% | |
| AAGTTGTACATGGCCAAAAA+AGG | - | chr5.1:43472022-43472041 | MS.gene053870:intron | 35.0% | |
| ACTATTCATTGGGAAAGAGA+TGG | + | chr5.1:43471553-43471572 | None:intergenic | 35.0% | |
| AGGAATCTTGTTAGATTGAG+AGG | + | chr5.1:43472530-43472549 | None:intergenic | 35.0% | |
| ATCTCTTTCCCAATGAATAG+TGG | - | chr5.1:43471552-43471571 | MS.gene053870:intron | 35.0% | |
| ATGAGTAATCCTTGTCAAAG+CGG | + | chr5.1:43471445-43471464 | None:intergenic | 35.0% | |
| ATGTTGTCAATTGCAGATAG+CGG | - | chr5.1:43469275-43469294 | MS.gene053870:intron | 35.0% | |
| CAATATCTACAAACCCATTG+TGG | - | chr5.1:43471013-43471032 | MS.gene053870:intron | 35.0% | |
| CAATCTAACAAGATTCCTCT+CGG | - | chr5.1:43472532-43472551 | MS.gene053870:intron | 35.0% | |
| CAGAATATAGTTAGGACTGA+AGG | - | chr5.1:43469798-43469817 | MS.gene053870:intron | 35.0% | |
| CTATCATAGAGAGTAGATAG+AGG | + | chr5.1:43470142-43470161 | None:intergenic | 35.0% | |
| CTCTTGTAAGGAACAACATT+AGG | + | chr5.1:43471414-43471433 | None:intergenic | 35.0% | |
| GAATCAGTGTTGTCAAATAG+CGG | + | chr5.1:43469637-43469656 | None:intergenic | 35.0% | |
| GAATGTAATAACAGCTGAAG+GGG | + | chr5.1:43472383-43472402 | None:intergenic | 35.0% | |
| GACATCACCTTGTGAAAAAA+AGG | + | chr5.1:43471680-43471699 | None:intergenic | 35.0% | |
| GCTTCTCATGCATTTAATCT+TGG | - | chr5.1:43471067-43471086 | MS.gene053870:intron | 35.0% | |
| GGAAGATTATGAGACATCAA+CGG | + | chr5.1:43471156-43471175 | None:intergenic | 35.0% | |
| GGAATCTTGTTAGATTGAGA+GGG | + | chr5.1:43472529-43472548 | None:intergenic | 35.0% | |
| GGTACTAGTCATAATATCAG+AGG | - | chr5.1:43468537-43468556 | MS.gene053870:CDS | 35.0% | |
| GTCCATGCTTCATAGTAAAT+GGG | - | chr5.1:43469031-43469050 | MS.gene053870:intron | 35.0% | |
| GTGAATGTAATAACAGCTGA+AGG | + | chr5.1:43472385-43472404 | None:intergenic | 35.0% | |
| TAAACATTAGGTCTGCAAGT+TGG | + | chr5.1:43470175-43470194 | None:intergenic | 35.0% | |
| TAGCTGTCCAGAAAATAATC+TGG | + | chr5.1:43471855-43471874 | None:intergenic | 35.0% | |
| TGTCCATGCTTCATAGTAAA+TGG | - | chr5.1:43469030-43469049 | MS.gene053870:intron | 35.0% | |
| TTGTCTTAACAACCCACAAT+GGG | + | chr5.1:43471029-43471048 | None:intergenic | 35.0% | |
| TTTAGTACAGTCAATAACCC+CGG | + | chr5.1:43472293-43472312 | None:intergenic | 35.0% | |
| TTTGACAAGGATTACTCATG+AGG | - | chr5.1:43471446-43471465 | MS.gene053870:intron | 35.0% | |
| ! | AACATAACAAGGGCATGTAT+AGG | + | chr5.1:43471339-43471358 | None:intergenic | 35.0% |
| ! | ACAATGGTTGATGCCAAATT+TGG | - | chr5.1:43471713-43471732 | MS.gene053870:intron | 35.0% |
| ! | ACATTTTCTCCAGTCTAAAG+AGG | + | chr5.1:43471765-43471784 | None:intergenic | 35.0% |
| ! | ATGCTAGTATTGTTGGTGAA+AGG | + | chr5.1:43469845-43469864 | None:intergenic | 35.0% |
| ! | CATAGCATCTTTTACTGCAA+TGG | + | chr5.1:43469939-43469958 | None:intergenic | 35.0% |
| ! | TCTGGTTTCTGTATTGAACT+TGG | + | chr5.1:43471837-43471856 | None:intergenic | 35.0% |
| !! | GTGTTTTTATCACGAACATG+AGG | - | chr5.1:43469189-43469208 | MS.gene053870:intron | 35.0% |
| !! | GTTTCAAAAGGAAGGCATTA+AGG | - | chr5.1:43472318-43472337 | MS.gene053870:intron | 35.0% |
| !! | TTGTCAAATAGCGGATATAG+CGG | + | chr5.1:43469628-43469647 | None:intergenic | 35.0% |
| !!! | ATCCATGCCTTTTTTTCACA+AGG | - | chr5.1:43471670-43471689 | MS.gene053870:intron | 35.0% |
| AAGACAAGGCTACAAGTTCA+TGG | - | chr5.1:43468807-43468826 | MS.gene053870:CDS | 40.0% | |
| ACAAGGATTACTCATGAGGA+AGG | - | chr5.1:43471450-43471469 | MS.gene053870:intron | 40.0% | |
| ACACAAACACAAACACGACA+CGG | + | chr5.1:43469013-43469032 | None:intergenic | 40.0% | |
| ACATCTAGTGCTATGCAAGA+AGG | + | chr5.1:43470408-43470427 | None:intergenic | 40.0% | |
| ACCAGCTAACAAGACATTGA+GGG | - | chr5.1:43472563-43472582 | MS.gene053870:CDS | 40.0% | |
| ACTACCTAGGAGAATAGCAA+AGG | + | chr5.1:43469760-43469779 | None:intergenic | 40.0% | |
| ACTAGCATTGCTTCCAAACT+GGG | - | chr5.1:43469857-43469876 | MS.gene053870:intron | 40.0% | |
| AGCTTCAAATTACGGCTCTT+GGG | - | chr5.1:43470284-43470303 | MS.gene053870:intron | 40.0% | |
| ATCTGCTGTCCACTATTCAT+TGG | + | chr5.1:43471564-43471583 | None:intergenic | 40.0% | |
| ATCTTGTTAGATTGAGAGGG+TGG | + | chr5.1:43472526-43472545 | None:intergenic | 40.0% | |
| CACCTTGTGAAAAAAAGGCA+TGG | + | chr5.1:43471675-43471694 | None:intergenic | 40.0% | |
| CATTGGATGTGATCAAGACA+AGG | - | chr5.1:43468793-43468812 | MS.gene053870:CDS | 40.0% | |
| CCAATTTCGGCCAATATGAT+GGG | - | chr5.1:43469409-43469428 | MS.gene053870:intron | 40.0% | |
| CCAGTTATGAGATGATACAC+AGG | - | chr5.1:43472404-43472423 | MS.gene053870:intron | 40.0% | |
| CCATCATATTGGCCGAAATT+GGG | + | chr5.1:43469411-43469430 | None:intergenic | 40.0% | |
| CCTGTGTATCATCTCATAAC+TGG | + | chr5.1:43472407-43472426 | None:intergenic | 40.0% | |
| CGAGCTTGCAGAATATAGTT+AGG | - | chr5.1:43469790-43469809 | MS.gene053870:intron | 40.0% | |
| CTAGGAGAATAGCAAAGGTT+AGG | + | chr5.1:43469755-43469774 | None:intergenic | 40.0% | |
| CTCTCCATGATACCCAATTT+CGG | - | chr5.1:43469396-43469415 | MS.gene053870:intron | 40.0% | |
| CTTGTCTTAACAACCCACAA+TGG | + | chr5.1:43471030-43471049 | None:intergenic | 40.0% | |
| CTTGTCTTGATCACATCCAA+TGG | + | chr5.1:43468795-43468814 | None:intergenic | 40.0% | |
| GACCCATTTACTATGAAGCA+TGG | + | chr5.1:43469036-43469055 | None:intergenic | 40.0% | |
| GCTTCATAGTAAATGGGTCA+TGG | - | chr5.1:43469037-43469056 | MS.gene053870:intron | 40.0% | |
| GGAAATATTATAGCTGCTGC+TGG | - | chr5.1:43470973-43470992 | MS.gene053870:intron | 40.0% | |
| GGAAGCAATGCTAGTATTGT+TGG | + | chr5.1:43469852-43469871 | None:intergenic | 40.0% | |
| GGATCTTCATGGAAAAGTAG+AGG | + | chr5.1:43470493-43470512 | None:intergenic | 40.0% | |
| GGATTTGAGGAAACCAGAAT+TGG | + | chr5.1:43470806-43470825 | None:intergenic | 40.0% | |
| GGCGCCATCATATTGTATTA+TGG | + | chr5.1:43469443-43469462 | None:intergenic | 40.0% | |
| GGCGTAAAATCCCATCATAT+TGG | + | chr5.1:43469422-43469441 | None:intergenic | 40.0% | |
| GTGTATATGGTATCGCAAGT+GGG | + | chr5.1:43470035-43470054 | None:intergenic | 40.0% | |
| GTGTGGATAAGTCATTACAG+AGG | + | chr5.1:43472206-43472225 | None:intergenic | 40.0% | |
| GTGTTGTCAAATATCGACCA+TGG | - | chr5.1:43469349-43469368 | MS.gene053870:intron | 40.0% | |
| TACTAGCATTGCTTCCAAAC+TGG | - | chr5.1:43469856-43469875 | MS.gene053870:intron | 40.0% | |
| TAGCTTCAAATTACGGCTCT+TGG | - | chr5.1:43470283-43470302 | MS.gene053870:intron | 40.0% | |
| TATGAGACATCAACGGTGAA+AGG | + | chr5.1:43471149-43471168 | None:intergenic | 40.0% | |
| TCTGCTGTCCACTATTCATT+GGG | + | chr5.1:43471563-43471582 | None:intergenic | 40.0% | |
| TGCAACGAACTCACAACTAT+TGG | - | chr5.1:43470952-43470971 | MS.gene053870:intron | 40.0% | |
| TGCTACACTATAGCGCTATA+GGG | - | chr5.1:43469602-43469621 | MS.gene053870:intron | 40.0% | |
| TGTAATGACTTATCCACACG+AGG | - | chr5.1:43472207-43472226 | MS.gene053870:intron | 40.0% | |
| TTGTCAAATATCGACCATGG+CGG | - | chr5.1:43469352-43469371 | MS.gene053870:intron | 40.0% | |
| ! | AGCAAATAAAGGGCTTGCTT+CGG | - | chr5.1:43470669-43470688 | MS.gene053870:intron | 40.0% |
| ! | AGTAGTGGAGTTCAATATGC+CGG | - | chr5.1:43472271-43472290 | MS.gene053870:CDS | 40.0% |
| ! | GGCATTAAGGGATTTTATCG+TGG | - | chr5.1:43472331-43472350 | MS.gene053870:intron | 40.0% |
| ! | GGTATTTTGCCTTCATTAGC+TGG | - | chr5.1:43471956-43471975 | MS.gene053870:intron | 40.0% |
| ! | TCTGAAACCTATCAGACACA+AGG | - | chr5.1:43471381-43471400 | MS.gene053870:intron | 40.0% |
| !! | CTAACCTTTGCTATTCTCCT+AGG | - | chr5.1:43469753-43469772 | MS.gene053870:intron | 40.0% |
| !! | CTCCACTACTATTTTTCGCT+TGG | + | chr5.1:43472261-43472280 | None:intergenic | 40.0% |
| !!! | GCTGCTGCTGGTAATTTTTT+TGG | - | chr5.1:43468585-43468604 | MS.gene053870:CDS | 40.0% |
| AAGAAACTCACTGCCCAGTT+TGG | + | chr5.1:43469873-43469892 | None:intergenic | 45.0% | |
| AAGTGCAGTGTTGTCTATGG+TGG | + | chr5.1:43469516-43469535 | None:intergenic | 45.0% | |
| ACTGTCGACAAGCTAAATCC+TGG | - | chr5.1:43472142-43472161 | MS.gene053870:intron | 45.0% | |
| AGAGGTTTAATCTCCAACGC+TGG | - | chr5.1:43468555-43468574 | MS.gene053870:CDS | 45.0% | |
| AGCAAGTGCAGTGTTGTCTA+TGG | + | chr5.1:43469519-43469538 | None:intergenic | 45.0% | |
| AGTTAGGACTGAAGGCTTCA+GGG | - | chr5.1:43469806-43469825 | MS.gene053870:intron | 45.0% | |
| CATACCTATACAGTCCTCGT+AGG | + | chr5.1:43471476-43471495 | None:intergenic | 45.0% | |
| CATGGAAAAGTAGAGGCAAC+TGG | + | chr5.1:43470486-43470505 | None:intergenic | 45.0% | |
| CATGTATCGCTGAACACTTG+TGG | - | chr5.1:43469566-43469585 | MS.gene053870:intron | 45.0% | |
| CCCAATTTCGGCCAATATGA+TGG | - | chr5.1:43469408-43469427 | MS.gene053870:intron | 45.0% | |
| CCCATCATATTGGCCGAAAT+TGG | + | chr5.1:43469412-43469431 | None:intergenic | 45.0% | |
| CCTATCAGACACAAGGTATG+AGG | - | chr5.1:43471388-43471407 | MS.gene053870:intron | 45.0% | |
| CCTCATACCTTGTGTCTGAT+AGG | + | chr5.1:43471391-43471410 | None:intergenic | 45.0% | |
| CGTGTATATGGTATCGCAAG+TGG | + | chr5.1:43470036-43470055 | None:intergenic | 45.0% | |
| CTGCTACACTATAGCGCTAT+AGG | - | chr5.1:43469601-43469620 | MS.gene053870:intron | 45.0% | |
| CTGTCGACAAGCTAAATCCT+GGG | - | chr5.1:43472143-43472162 | MS.gene053870:intron | 45.0% | |
| GACCAGCTAACAAGACATTG+AGG | - | chr5.1:43472562-43472581 | MS.gene053870:CDS | 45.0% | |
| GCGGAGAGAAAACTCTTGTA+AGG | + | chr5.1:43471426-43471445 | None:intergenic | 45.0% | |
| GGCAAAATACCACTGCATCA+AGG | + | chr5.1:43471947-43471966 | None:intergenic | 45.0% | |
| GGCCAAGCGAAAAATAGTAG+TGG | - | chr5.1:43472256-43472275 | MS.gene053870:CDS | 45.0% | |
| TAGTGGAGTTCAATATGCCG+GGG | - | chr5.1:43472273-43472292 | MS.gene053870:CDS | 45.0% | |
| TAGTTAGGACTGAAGGCTTC+AGG | - | chr5.1:43469805-43469824 | MS.gene053870:intron | 45.0% | |
| TCGTGACAATGACACTACCT+AGG | + | chr5.1:43469773-43469792 | None:intergenic | 45.0% | |
| TGACTTACGCCAGCTAATGA+AGG | + | chr5.1:43471968-43471987 | None:intergenic | 45.0% | |
| TGCTACGTTTGTGTGTCCAT+TGG | - | chr5.1:43468776-43468795 | MS.gene053870:CDS | 45.0% | |
| TTGGCCGAAATTGGGTATCA+TGG | + | chr5.1:43469403-43469422 | None:intergenic | 45.0% | |
| ! | ACGTCTTCGATCAGAAGTGT+CGG | + | chr5.1:43468891-43468910 | None:intergenic | 45.0% |
| ! | GTAGTGGAGTTCAATATGCC+GGG | - | chr5.1:43472272-43472291 | MS.gene053870:CDS | 45.0% |
| ! | GTATTGTTGGTGAAAGGCCA+CGG | + | chr5.1:43469839-43469858 | None:intergenic | 45.0% |
| ! | GTTTTCTCTCCGCTTTGACA+AGG | - | chr5.1:43471433-43471452 | MS.gene053870:intron | 45.0% |
| !! | AATGTCACTGGCTTCTGGTT+TGG | + | chr5.1:43472470-43472489 | None:intergenic | 45.0% |
| !! | ATATCGACCATGGCGGATAT+AGG | - | chr5.1:43469359-43469378 | MS.gene053870:intron | 45.0% |
| !! | ATGTCACTGGCTTCTGGTTT+GGG | + | chr5.1:43472469-43472488 | None:intergenic | 45.0% |
| !! | CATTAGGTCTGCAAGTTGGT+TGG | + | chr5.1:43470171-43470190 | None:intergenic | 45.0% |
| !! | GCTTCTGGTTTGGGTTTGTT+AGG | + | chr5.1:43472460-43472479 | None:intergenic | 45.0% |
| !! | GTATCAATGTCACTGGCTTC+TGG | + | chr5.1:43472475-43472494 | None:intergenic | 45.0% |
| !! | GTTGGTAATACTGTCGCAGA+GGG | - | chr5.1:43470928-43470947 | MS.gene053870:intron | 45.0% |
| !! | TGTTGGTAATACTGTCGCAG+AGG | - | chr5.1:43470927-43470946 | MS.gene053870:intron | 45.0% |
| !!! | GGATATAGGTGGCGGTTTTT+TGG | - | chr5.1:43469373-43469392 | MS.gene053870:intron | 45.0% |
| !!! | GGTTTGTTAGGCTCGTTTTG+TGG | + | chr5.1:43472448-43472467 | None:intergenic | 45.0% |
| AAGGCCTACGAGGACTGTAT+AGG | - | chr5.1:43471469-43471488 | MS.gene053870:intron | 50.0% | |
| ATGGGTCATGGACAATGCTG+AGG | - | chr5.1:43469049-43469068 | MS.gene053870:intron | 50.0% | |
| ATTATAGCTGCTGCTGGAGC+TGG | - | chr5.1:43470979-43470998 | MS.gene053870:intron | 50.0% | |
| CACACGAGGTAATACGTTCC+CGG | - | chr5.1:43472221-43472240 | MS.gene053870:intron | 50.0% | |
| GACAATGCTGAGGCTGATGT+TGG | - | chr5.1:43469059-43469078 | MS.gene053870:CDS | 50.0% | |
| GTGCTTCTCCGTTGAGAGTT+AGG | - | chr5.1:43469167-43469186 | MS.gene053870:intron | 50.0% | |
| GTTAGGACTGAAGGCTTCAG+GGG | - | chr5.1:43469807-43469826 | MS.gene053870:intron | 50.0% | |
| TCAGCGTATTCGACACGTGT+CGG | - | chr5.1:43468912-43468931 | MS.gene053870:CDS | 50.0% | |
| TGTAACCGCATGTGTCGTGT+CGG | + | chr5.1:43468954-43468973 | None:intergenic | 50.0% | |
| TTAATCTCCAACGCTGGTGC+TGG | - | chr5.1:43468561-43468580 | MS.gene053870:CDS | 50.0% | |
| TTATAGCTGCTGCTGGAGCT+GGG | - | chr5.1:43470980-43470999 | MS.gene053870:intron | 50.0% | |
| ! | AGAAGTGTACCTTTCTGCGC+AGG | + | chr5.1:43468840-43468859 | None:intergenic | 50.0% |
| ! | GCAGTGTTGTCTATGGTGGA+TGG | + | chr5.1:43469512-43469531 | None:intergenic | 50.0% |
| !! | AGCTGGTCTTTGTTTCCGAG+AGG | + | chr5.1:43472550-43472569 | None:intergenic | 50.0% |
| !! | CAGCTGGTATGGCGGAATTT+TGG | - | chr5.1:43469469-43469488 | MS.gene053870:intron | 50.0% |
| !! | GATCAGAAGTGTCGGTGCTA+CGG | + | chr5.1:43468883-43468902 | None:intergenic | 50.0% |
| !! | GTCTGCAAGTTGGTTGGTGA+AGG | + | chr5.1:43470165-43470184 | None:intergenic | 50.0% |
| !! | TGTTGTCTATGGTGGATGGC+AGG | + | chr5.1:43469508-43469527 | None:intergenic | 50.0% |
| ACAGTCCGACACGACACATG+CGG | - | chr5.1:43468946-43468965 | MS.gene053870:intron | 55.0% | |
| ACTCATGAGGAAGGCCTACG+AGG | - | chr5.1:43471459-43471478 | MS.gene053870:intron | 55.0% | |
| AGTGTACCTTTCTGCGCAGG+TGG | + | chr5.1:43468837-43468856 | None:intergenic | 55.0% | |
| CCACAAAGCAGCTGGTATGG+CGG | - | chr5.1:43469461-43469480 | MS.gene053870:intron | 55.0% | |
| CGGGAACGTATTACCTCGTG+TGG | + | chr5.1:43472223-43472242 | None:intergenic | 55.0% | |
| GATGCGATTGCAACACTCCC+AGG | + | chr5.1:43472163-43472182 | None:intergenic | 55.0% | |
| TACCTTTCTGCGCAGGTGGA+AGG | + | chr5.1:43468833-43468852 | None:intergenic | 55.0% | |
| TATAGCTGCTGCTGGAGCTG+GGG | - | chr5.1:43470981-43471000 | MS.gene053870:intron | 55.0% | |
| ! | AAGGGCTTGCTTCGGTCACA+TGG | - | chr5.1:43470677-43470696 | MS.gene053870:intron | 55.0% |
| !! | ACCATGGCGGATATAGGTGG+CGG | - | chr5.1:43469365-43469384 | MS.gene053870:intron | 55.0% |
| !! | TCGACCATGGCGGATATAGG+TGG | - | chr5.1:43469362-43469381 | MS.gene053870:intron | 55.0% |
| ACCGCCACCTATATCCGCCA+TGG | + | chr5.1:43469369-43469388 | None:intergenic | 60.0% | |
| ATAGCTGCTGCTGGAGCTGG+GGG | - | chr5.1:43470982-43471001 | MS.gene053870:intron | 60.0% | |
| GCGCCACAAAGCAGCTGGTA+TGG | - | chr5.1:43469458-43469477 | MS.gene053870:intron | 60.0% | |
| GGCTTCAGGGGATTGTACCG+TGG | - | chr5.1:43469819-43469838 | MS.gene053870:intron | 60.0% | |
| ! | CCGCCATACCAGCTGCTTTG+TGG | + | chr5.1:43469464-43469483 | None:intergenic | 60.0% |
| ! | TGATGGCGCCACAAAGCAGC+TGG | - | chr5.1:43469453-43469472 | MS.gene053870:intron | 60.0% |
| !! | CTTGGCCTTGCTCTTGCAGC+CGG | + | chr5.1:43472243-43472262 | None:intergenic | 60.0% |
| !! | TTGGCCTTGCTCTTGCAGCC+GGG | + | chr5.1:43472242-43472261 | None:intergenic | 60.0% |
| AGCAGCACCAGCACCAGCGT+TGG | + | chr5.1:43468571-43468590 | None:intergenic | 65.0% | |
| CGTTCCCGGCTGCAAGAGCA+AGG | - | chr5.1:43472235-43472254 | MS.gene053870:intron | 65.0% | |
| GGCCTTCCACCTGCGCAGAA+AGG | - | chr5.1:43468828-43468847 | MS.gene053870:CDS | 65.0% | |
| !! | GCTGGTGCTGGTGCTGCTGC+TGG | - | chr5.1:43468573-43468592 | MS.gene053870:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 43468513 | 43472582 | 43468513 | ID=MS.gene053870 |
| chr5.1 | mRNA | 43468513 | 43472582 | 43468513 | ID=MS.gene053870.t1;Parent=MS.gene053870 |
| chr5.1 | exon | 43472537 | 43472582 | 43472537 | ID=MS.gene053870.t1.exon1;Parent=MS.gene053870.t1 |
| chr5.1 | CDS | 43472537 | 43472582 | 43472537 | ID=cds.MS.gene053870.t1;Parent=MS.gene053870.t1 |
| chr5.1 | exon | 43472246 | 43472329 | 43472246 | ID=MS.gene053870.t1.exon2;Parent=MS.gene053870.t1 |
| chr5.1 | CDS | 43472246 | 43472329 | 43472246 | ID=cds.MS.gene053870.t1;Parent=MS.gene053870.t1 |
| chr5.1 | exon | 43471214 | 43471320 | 43471214 | ID=MS.gene053870.t1.exon3;Parent=MS.gene053870.t1 |
| chr5.1 | CDS | 43471214 | 43471320 | 43471214 | ID=cds.MS.gene053870.t1;Parent=MS.gene053870.t1 |
| chr5.1 | exon | 43470397 | 43470445 | 43470397 | ID=MS.gene053870.t1.exon4;Parent=MS.gene053870.t1 |
| chr5.1 | CDS | 43470397 | 43470445 | 43470397 | ID=cds.MS.gene053870.t1;Parent=MS.gene053870.t1 |
| chr5.1 | exon | 43470039 | 43470148 | 43470039 | ID=MS.gene053870.t1.exon5;Parent=MS.gene053870.t1 |
| chr5.1 | CDS | 43470039 | 43470148 | 43470039 | ID=cds.MS.gene053870.t1;Parent=MS.gene053870.t1 |
| chr5.1 | exon | 43469605 | 43469699 | 43469605 | ID=MS.gene053870.t1.exon6;Parent=MS.gene053870.t1 |
| chr5.1 | CDS | 43469605 | 43469699 | 43469605 | ID=cds.MS.gene053870.t1;Parent=MS.gene053870.t1 |
| chr5.1 | exon | 43469052 | 43469140 | 43469052 | ID=MS.gene053870.t1.exon7;Parent=MS.gene053870.t1 |
| chr5.1 | CDS | 43469052 | 43469140 | 43469052 | ID=cds.MS.gene053870.t1;Parent=MS.gene053870.t1 |
| chr5.1 | exon | 43468513 | 43468961 | 43468513 | ID=MS.gene053870.t1.exon8;Parent=MS.gene053870.t1 |
| chr5.1 | CDS | 43468513 | 43468961 | 43468513 | ID=cds.MS.gene053870.t1;Parent=MS.gene053870.t1 |
| Gene Sequence |
| Protein sequence |
