AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80843

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80843.t1 MTR_6g084430 97.256 328 6 1 1 328 1 325 0.0 664
MS.gene80843.t1 MTR_3g435150 57.384 237 88 4 5 229 16 251 1.32e-88 268
MS.gene80843.t1 MTR_4g108760 66.332 199 54 4 4 198 16 205 1.51e-88 270
MS.gene80843.t1 MTR_3g109340 71.429 175 38 2 2 174 19 183 1.78e-86 264
MS.gene80843.t1 MTR_3g109340 71.023 176 38 3 2 174 19 184 1.09e-84 259
MS.gene80843.t1 MTR_1g008740 76.250 160 34 3 2 157 10 169 2.82e-83 256
MS.gene80843.t1 MTR_1g008740 76.250 160 34 3 2 157 24 183 4.74e-83 256
MS.gene80843.t1 MTR_2g078700 75.796 157 32 3 2 152 20 176 6.51e-83 256
MS.gene80843.t1 MTR_6g012670 70.701 157 42 1 5 157 20 176 2.77e-81 249
MS.gene80843.t1 MTR_7g085260 67.665 167 46 3 4 162 16 182 2.67e-77 241
MS.gene80843.t1 MTR_3g070030 52.137 234 102 4 5 231 19 249 4.99e-72 227
MS.gene80843.t1 MTR_6g032770 63.690 168 52 4 4 164 17 182 5.17e-70 223
MS.gene80843.t1 MTR_7g011130 63.473 167 44 2 8 157 22 188 6.96e-70 221
MS.gene80843.t1 MTR_2g064470 43.726 263 135 6 1 258 7 261 2.12e-68 216
MS.gene80843.t1 MTR_7g011120 63.924 158 46 2 5 151 8 165 6.63e-67 213
MS.gene80843.t1 MTR_3g116070 69.504 141 39 3 2 139 20 159 4.66e-65 209
MS.gene80843.t1 MTR_4g036030 50.262 191 89 2 5 192 7 194 3.64e-62 201
MS.gene80843.t1 MTR_4g101680 53.801 171 73 2 4 171 6 173 8.35e-61 198
MS.gene80843.t1 MTR_5g012080 54.070 172 69 4 4 170 6 172 7.56e-60 196
MS.gene80843.t1 MTR_7g085220 55.422 166 59 3 2 152 5 170 1.66e-59 194
MS.gene80843.t1 MTR_8g059170 57.595 158 63 2 4 157 13 170 1.91e-59 194
MS.gene80843.t1 MTR_2g079990 56.051 157 67 1 4 158 15 171 2.49e-59 194
MS.gene80843.t1 MTR_4g081870 45.714 210 102 2 5 208 9 212 4.58e-59 191
MS.gene80843.t1 MTR_3g070040 48.052 231 106 5 9 231 12 236 5.41e-59 193
MS.gene80843.t1 MTR_2g080010 40.072 277 133 7 2 253 12 280 5.75e-59 193
MS.gene80843.t1 MTR_5g021710 54.545 154 67 1 1 151 4 157 1.27e-58 192
MS.gene80843.t1 MTR_2g064090 57.792 154 60 2 5 153 6 159 1.56e-58 192
MS.gene80843.t1 MTR_2g062730 40.244 246 123 3 2 243 7 232 1.72e-58 192
MS.gene80843.t1 MTR_4g035590 60.000 150 56 2 5 151 8 156 1.77e-58 192
MS.gene80843.t1 MTR_1g069805 56.291 151 62 2 4 152 9 157 1.27e-57 187
MS.gene80843.t1 MTR_3g088110 55.280 161 66 2 2 157 4 163 1.54e-57 187
MS.gene80843.t1 MTR_2157s0010 54.938 162 59 2 5 152 8 169 1.60e-57 187
MS.gene80843.t1 MTR_4g089135 50.532 188 66 4 5 165 15 202 2.03e-57 189
MS.gene80843.t1 MTR_6g477900 48.500 200 93 5 4 197 5 200 4.20e-57 185
MS.gene80843.t1 MTR_8g076110 50.943 159 75 1 1 156 2 160 5.25e-57 187
MS.gene80843.t1 MTR_5g041940 53.165 158 68 1 5 156 3 160 6.26e-57 185
MS.gene80843.t1 MTR_1g096430 50.932 161 76 1 1 158 3 163 7.88e-57 187
MS.gene80843.t1 MTR_5g076850 58.553 152 59 2 5 152 6 157 1.57e-56 194
MS.gene80843.t1 MTR_7g100990 55.063 158 63 2 2 151 8 165 2.63e-56 186
MS.gene80843.t1 MTR_3g064580 58.170 153 59 2 5 152 6 158 5.10e-56 193
MS.gene80843.t1 MTR_7g097090 56.081 148 61 2 5 150 10 155 8.36e-56 183
MS.gene80843.t1 MTR_8g024480 51.220 164 66 2 2 151 12 175 7.32e-55 185
MS.gene80843.t1 MTR_8g094580 51.429 175 71 4 5 168 7 178 2.07e-54 179
MS.gene80843.t1 MTR_2g079990 47.568 185 67 2 4 158 15 199 9.63e-54 181
MS.gene80843.t1 MTR_3g096920 54.601 163 64 3 2 157 4 163 1.05e-53 178
MS.gene80843.t1 MTR_2g093810 52.500 160 68 2 5 156 14 173 3.09e-52 175
MS.gene80843.t1 MTR_7g005280 51.266 158 72 2 2 157 12 166 4.09e-51 170
MS.gene80843.t1 MTR_3g096920 57.047 149 59 2 2 148 4 149 5.12e-50 169
MS.gene80843.t1 MTR_0036s0150 54.140 157 64 4 7 157 7 161 5.16e-49 172
MS.gene80843.t1 MTR_8g467490 45.882 170 79 3 1 157 10 179 9.49e-49 168
MS.gene80843.t1 MTR_6g011860 37.050 278 150 7 3 258 13 287 1.14e-48 167
MS.gene80843.t1 MTR_5g014300 49.682 157 69 3 4 151 5 160 1.40e-48 166
MS.gene80843.t1 MTR_1g090723 53.205 156 68 3 7 157 10 165 1.40e-48 172
MS.gene80843.t1 MTR_5g040420 46.154 169 79 3 1 157 10 178 2.80e-48 166
MS.gene80843.t1 MTR_1g090723 52.258 155 70 3 7 157 10 164 4.30e-48 171
MS.gene80843.t1 MTR_1g090723 52.258 155 70 3 7 157 10 164 4.46e-48 170
MS.gene80843.t1 MTR_3g096140 51.678 149 68 2 7 151 9 157 8.50e-48 162
MS.gene80843.t1 MTR_3g093040 50.658 152 71 2 4 151 107 258 1.43e-47 162
MS.gene80843.t1 MTR_5g069030 52.318 151 68 2 5 151 25 175 3.25e-47 168
MS.gene80843.t1 MTR_3g096140 51.678 149 68 2 7 151 9 157 4.68e-47 162
MS.gene80843.t1 MTR_4g134460 49.333 150 69 2 7 152 56 202 6.37e-47 164
MS.gene80843.t1 MTR_3g093050 52.318 151 68 2 5 151 22 172 6.44e-47 167
MS.gene80843.t1 MTR_3g093050 52.318 151 68 2 5 151 22 172 8.16e-47 167
MS.gene80843.t1 MTR_4g098630 43.429 175 86 4 4 168 5 176 2.61e-45 157
MS.gene80843.t1 MTR_8g063550 48.344 151 74 2 5 151 6 156 3.99e-45 157
MS.gene80843.t1 MTR_8g063550 48.344 151 74 2 5 151 6 156 9.06e-45 158
MS.gene80843.t1 MTR_8g063550 48.344 151 74 2 5 151 6 156 9.43e-45 158
MS.gene80843.t1 MTR_1g090720 50.633 158 68 2 4 151 41 198 5.88e-44 157
MS.gene80843.t1 MTR_1g097300 48.667 150 73 2 7 152 21 170 3.79e-43 156
MS.gene80843.t1 MTR_2g086880 48.951 143 67 2 7 148 20 157 4.43e-43 155
MS.gene80843.t1 MTR_2g086880 48.951 143 67 2 7 148 20 157 5.77e-43 156
MS.gene80843.t1 MTR_8g093580 47.020 151 76 2 5 151 6 156 1.09e-42 154
MS.gene80843.t1 MTR_2g068880 36.170 235 125 6 2 216 18 247 2.71e-42 149
MS.gene80843.t1 MTR_4g075980 42.073 164 89 2 7 167 17 177 8.87e-42 147
MS.gene80843.t1 MTR_2g068920 41.714 175 83 4 2 157 17 191 1.39e-41 146
MS.gene80843.t1 MTR_5g090970 41.860 172 82 3 2 157 15 184 1.39e-41 147
MS.gene80843.t1 MTR_5g090970 41.860 172 81 4 2 157 15 183 6.50e-40 142
MS.gene80843.t1 MTR_8g099750 43.137 153 76 3 5 148 14 164 9.23e-39 137
MS.gene80843.t1 MTR_3g096140 48.889 135 65 2 21 151 2 136 1.53e-37 137
MS.gene80843.t1 MTR_3g098810 41.975 162 80 3 5 154 14 173 3.57e-37 133
MS.gene80843.t1 MTR_8g023840 46.667 150 71 5 4 148 10 155 4.32e-36 134
MS.gene80843.t1 MTR_3g098810 46.923 130 63 2 5 130 14 141 8.32e-35 125
MS.gene80843.t1 MTR_8g094580 52.381 126 46 4 54 168 2 124 1.31e-34 126
MS.gene80843.t1 MTR_4g052620 40.719 167 88 6 1 156 1 167 7.25e-34 125
MS.gene80843.t1 MTR_8g023860 44.371 151 75 6 3 148 10 156 4.59e-33 127
MS.gene80843.t1 MTR_8g023880 40.719 167 72 7 4 151 6 164 1.25e-31 119
MS.gene80843.t1 MTR_2g086690 39.103 156 83 6 6 149 5 160 2.89e-30 115
MS.gene80843.t1 MTR_7g105170 39.024 164 86 6 3 152 2 165 6.89e-30 114
MS.gene80843.t1 MTR_4g094302 33.854 192 106 4 5 186 11 191 7.61e-30 112
MS.gene80843.t1 MTR_8g023900 40.764 157 78 6 5 152 12 162 4.29e-28 114
MS.gene80843.t1 MTR_8g023900 37.267 161 87 6 1 151 184 340 7.80e-27 110
MS.gene80843.t1 MTR_8g023930 39.216 153 84 6 5 152 24 172 6.40e-28 113
MS.gene80843.t1 MTR_4g094302 41.406 128 65 2 5 130 11 130 2.33e-27 105
MS.gene80843.t1 MTR_8g093790 41.060 151 63 6 5 151 10 138 4.78e-25 100
MS.gene80843.t1 MTR_7g070140 51.899 79 36 1 58 134 17 95 1.12e-22 92.0
MS.gene80843.t1 MTR_3g096400 35.802 162 80 6 5 150 7 160 3.55e-19 84.7
MS.gene80843.t1 MTR_7g083360 33.077 130 81 4 2 128 7 133 2.70e-17 78.2
MS.gene80843.t1 MTR_2g014680 32.317 164 92 6 5 152 53 213 4.85e-15 75.1
MS.gene80843.t1 MTR_7g083330 28.758 153 103 5 5 154 18 167 5.02e-15 72.8
MS.gene80843.t1 MTR_7g083370 29.927 137 90 4 1 134 6 139 7.74e-15 71.2
MS.gene80843.t1 MTR_5g053430 30.168 179 107 6 5 168 58 233 5.47e-14 72.8
MS.gene80843.t1 MTR_5g053430 30.726 179 106 7 5 168 58 233 5.68e-14 72.8
MS.gene80843.t1 MTR_7g070150 48.485 66 32 2 101 165 8 72 8.05e-14 66.6
MS.gene80843.t1 MTR_8g102240 30.108 186 96 8 4 164 46 222 8.80e-13 69.3
MS.gene80843.t1 MTR_8g102240 30.108 186 96 8 4 164 46 222 8.82e-13 69.3
MS.gene80843.t1 MTR_1g093680 28.889 180 108 8 5 168 58 233 1.33e-12 68.6
MS.gene80843.t1 MTR_2g090735 33.793 145 75 5 4 130 48 189 3.19e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80843.t1 AT3G18400 58.407 339 105 12 1 328 1 314 1.35e-118 344
MS.gene80843.t1 AT5G61430 75.316 158 35 2 4 157 15 172 5.90e-85 259
MS.gene80843.t1 AT5G53950 76.923 156 30 3 3 152 15 170 8.32e-84 258
MS.gene80843.t1 AT2G24430 75.472 159 36 2 2 157 13 171 1.66e-83 255
MS.gene80843.t1 AT2G24430 75.472 159 36 2 2 157 13 171 1.66e-83 255
MS.gene80843.t1 AT5G07680 72.152 158 40 2 4 157 2 159 2.70e-82 252
MS.gene80843.t1 AT5G07680 72.152 158 40 2 4 157 16 173 3.66e-82 252
MS.gene80843.t1 AT5G39610 73.750 160 37 2 4 158 19 178 7.48e-82 250
MS.gene80843.t1 AT5G18270 72.549 153 37 2 4 151 20 172 7.22e-80 246
MS.gene80843.t1 AT5G18270 71.895 153 38 2 4 151 20 172 2.45e-79 245
MS.gene80843.t1 AT3G04060 71.895 153 38 2 4 151 19 171 2.48e-77 240
MS.gene80843.t1 AT1G76420 69.620 158 45 2 2 156 19 176 3.69e-76 237
MS.gene80843.t1 AT3G29035 71.523 151 39 1 4 150 23 173 1.69e-75 235
MS.gene80843.t1 AT3G15170 57.282 206 79 5 2 201 17 219 3.09e-73 229
MS.gene80843.t1 AT1G56010 59.236 157 58 2 1 151 15 171 7.60e-65 207
MS.gene80843.t1 AT3G12977 59.740 154 59 2 1 151 14 167 2.02e-64 205
MS.gene80843.t1 AT4G27410 42.797 236 122 4 4 237 13 237 3.95e-62 200
MS.gene80843.t1 AT1G71930 51.553 161 75 1 1 158 5 165 1.40e-60 197
MS.gene80843.t1 AT1G71930 51.553 161 75 1 1 158 5 165 1.40e-60 197
MS.gene80843.t1 AT3G04070 46.256 227 90 7 4 205 9 228 3.94e-60 196
MS.gene80843.t1 AT3G10500 58.861 158 61 2 4 157 8 165 1.85e-59 200
MS.gene80843.t1 AT5G62380 56.129 155 65 1 4 155 6 160 2.11e-59 194
MS.gene80843.t1 AT5G62380 56.129 155 65 1 4 155 6 160 2.11e-59 194
MS.gene80843.t1 AT1G33280 52.151 186 73 3 5 175 8 192 2.90e-59 192
MS.gene80843.t1 AT3G04070 43.388 242 89 6 5 205 10 244 9.78e-59 193
MS.gene80843.t1 AT1G12260 54.194 155 68 1 4 155 6 160 9.86e-59 192
MS.gene80843.t1 AT4G27410 40.316 253 121 5 4 237 13 254 1.02e-58 191
MS.gene80843.t1 AT1G12260 54.545 154 67 1 5 155 7 160 1.26e-58 194
MS.gene80843.t1 AT4G10350 59.211 152 57 2 5 151 9 160 1.87e-58 192
MS.gene80843.t1 AT3G15500 55.769 156 67 1 4 157 13 168 9.32e-58 189
MS.gene80843.t1 AT5G04410 58.170 153 60 2 4 152 8 160 9.99e-58 196
MS.gene80843.t1 AT3G03200 55.625 160 66 2 5 159 6 165 1.99e-57 193
MS.gene80843.t1 AT1G01720 45.022 231 95 6 5 206 7 234 2.42e-57 187
MS.gene80843.t1 AT1G52890 56.129 155 66 1 5 157 14 168 3.06e-57 188
MS.gene80843.t1 AT1G62700 54.545 154 67 1 5 155 7 160 4.07e-57 190
MS.gene80843.t1 AT1G62700 54.545 154 67 1 5 155 7 160 4.07e-57 190
MS.gene80843.t1 AT2G18060 54.305 151 66 1 4 151 8 158 5.08e-57 189
MS.gene80843.t1 AT2G18060 54.305 151 66 1 4 151 8 158 5.08e-57 189
MS.gene80843.t1 AT4G36160 50.932 161 76 1 4 161 9 169 1.58e-56 188
MS.gene80843.t1 AT4G36160 50.932 161 76 1 4 161 9 169 1.58e-56 188
MS.gene80843.t1 AT4G36160 50.932 161 76 1 4 161 13 173 1.79e-56 187
MS.gene80843.t1 AT5G17260 54.658 161 68 2 4 159 5 165 3.48e-56 189
MS.gene80843.t1 AT1G65910 54.375 160 69 2 5 160 6 165 3.92e-56 192
MS.gene80843.t1 AT3G17730 55.921 152 63 2 4 151 5 156 4.63e-56 182
MS.gene80843.t1 AT5G66300 52.469 162 71 3 4 159 11 172 9.92e-56 183
MS.gene80843.t1 AT5G61430 76.852 108 21 2 54 157 2 109 2.44e-55 181
MS.gene80843.t1 AT5G08790 46.119 219 90 7 2 203 4 211 2.51e-55 182
MS.gene80843.t1 AT1G69490 48.901 182 85 2 5 178 9 190 6.05e-55 180
MS.gene80843.t1 AT2G46770 50.595 168 65 4 2 151 13 180 1.34e-54 182
MS.gene80843.t1 AT1G61110 51.176 170 67 3 4 158 15 183 1.72e-54 181
MS.gene80843.t1 AT3G61910 49.405 168 67 2 2 151 8 175 1.98e-54 181
MS.gene80843.t1 AT4G28530 53.614 166 57 3 5 152 10 173 2.20e-53 179
MS.gene80843.t1 AT1G33060 52.500 160 72 2 3 158 22 181 6.03e-53 184
MS.gene80843.t1 AT1G33060 52.500 160 72 2 3 158 22 181 6.61e-53 184
MS.gene80843.t1 AT1G77450 52.532 158 69 2 5 157 10 166 1.10e-52 174
MS.gene80843.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.29e-52 177
MS.gene80843.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.29e-52 177
MS.gene80843.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.29e-52 177
MS.gene80843.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.29e-52 177
MS.gene80843.t1 AT1G79580 54.305 151 64 3 5 151 17 166 1.29e-52 177
MS.gene80843.t1 AT5G63790 48.619 181 81 3 2 173 47 224 1.33e-52 176
MS.gene80843.t1 AT5G63790 48.619 181 81 3 2 173 57 234 1.51e-52 176
MS.gene80843.t1 AT1G54330 53.846 156 69 2 4 157 5 159 1.51e-52 175
MS.gene80843.t1 AT3G15510 52.147 163 63 3 9 156 21 183 1.99e-52 177
MS.gene80843.t1 AT4G35580 45.755 212 96 7 3 200 7 213 2.55e-52 180
MS.gene80843.t1 AT4G35580 45.755 212 96 7 3 200 7 213 4.28e-52 180
MS.gene80843.t1 AT4G35580 45.755 212 96 7 3 200 7 213 4.71e-52 180
MS.gene80843.t1 AT2G33480 53.333 150 67 1 5 154 15 161 1.28e-51 172
MS.gene80843.t1 AT5G46590 52.941 153 66 3 5 151 6 158 1.43e-51 172
MS.gene80843.t1 AT1G32770 48.485 165 70 2 2 151 13 177 5.63e-51 173
MS.gene80843.t1 AT3G10490 52.941 153 67 2 4 151 26 178 1.12e-50 168
MS.gene80843.t1 AT2G33480 52.632 152 67 2 5 154 15 163 2.08e-50 169
MS.gene80843.t1 AT3G10480 54.248 153 65 2 4 151 26 178 6.17e-50 172
MS.gene80843.t1 AT5G46590 57.364 129 52 2 5 130 6 134 6.59e-50 168
MS.gene80843.t1 AT3G10490 52.941 153 67 2 4 151 26 178 8.88e-50 172
MS.gene80843.t1 AT5G13180 50.641 156 71 3 5 157 14 166 1.49e-49 166
MS.gene80843.t1 AT4G17980 52.258 155 66 4 5 151 6 160 2.73e-49 166
MS.gene80843.t1 AT4G17980 52.258 155 66 4 5 151 6 160 4.55e-49 166
MS.gene80843.t1 AT3G10480 54.248 153 64 3 4 151 26 177 9.96e-49 169
MS.gene80843.t1 AT1G52880 52.795 161 62 3 9 155 21 181 2.90e-47 162
MS.gene80843.t1 AT1G26870 43.979 191 90 5 1 174 12 202 5.19e-47 164
MS.gene80843.t1 AT5G39820 42.105 190 83 4 7 169 22 211 9.26e-47 161
MS.gene80843.t1 AT2G02450 49.315 146 73 1 7 151 53 198 1.20e-46 162
MS.gene80843.t1 AT2G02450 49.315 146 73 1 7 151 53 198 1.41e-46 162
MS.gene80843.t1 AT2G43000 45.161 155 82 1 7 158 20 174 3.51e-46 158
MS.gene80843.t1 AT5G64060 46.711 152 77 2 4 151 5 156 1.76e-45 158
MS.gene80843.t1 AT1G34180 46.452 155 79 2 7 157 18 172 5.20e-45 159
MS.gene80843.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.82e-45 159
MS.gene80843.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.82e-45 159
MS.gene80843.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.82e-45 159
MS.gene80843.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.82e-45 159
MS.gene80843.t1 AT5G09330 49.007 151 73 2 5 151 6 156 8.82e-45 159
MS.gene80843.t1 AT1G34190 46.452 155 79 2 7 157 18 172 1.66e-44 160
MS.gene80843.t1 AT1G56010 64.078 103 32 1 54 151 2 104 2.16e-44 152
MS.gene80843.t1 AT3G10480 44.624 186 65 2 4 151 26 211 2.23e-44 159
MS.gene80843.t1 AT1G34180 46.452 155 79 2 7 157 18 172 2.91e-44 159
MS.gene80843.t1 AT5G24590 39.604 202 114 4 4 197 12 213 4.92e-44 157
MS.gene80843.t1 AT3G49530 38.605 215 111 5 3 212 11 209 1.74e-43 154
MS.gene80843.t1 AT3G49530 38.605 215 111 5 3 212 11 209 5.87e-43 154
MS.gene80843.t1 AT1G34180 43.114 167 79 2 7 157 18 184 6.98e-43 154
MS.gene80843.t1 AT2G17040 39.572 187 100 4 7 183 8 191 1.11e-42 149
MS.gene80843.t1 AT2G27300 48.276 145 69 2 5 148 14 153 3.13e-42 149
MS.gene80843.t1 AT1G34180 43.114 167 79 2 7 157 18 184 3.68e-42 154
MS.gene80843.t1 AT1G32510 45.455 165 78 3 5 157 6 170 6.10e-42 147
MS.gene80843.t1 AT3G12977 64.356 101 33 2 54 151 14 114 1.58e-41 144
MS.gene80843.t1 AT3G12910 42.353 170 78 5 7 157 23 191 7.92e-40 142
MS.gene80843.t1 AT1G32870 49.057 159 73 3 5 157 10 166 1.09e-39 146
MS.gene80843.t1 AT1G32870 49.057 159 73 3 5 157 10 166 1.21e-39 146
MS.gene80843.t1 AT1G32870 49.057 159 73 3 5 157 46 202 2.66e-39 146
MS.gene80843.t1 AT3G44290 42.767 159 80 3 7 159 16 169 4.34e-39 138
MS.gene80843.t1 AT5G22290 32.432 259 145 6 7 239 23 277 4.71e-39 141
MS.gene80843.t1 AT3G44290 42.767 159 80 3 7 159 16 169 1.37e-38 140
MS.gene80843.t1 AT4G10350 61.000 100 37 1 54 151 14 113 2.68e-36 132
MS.gene80843.t1 AT5G04395 45.517 145 63 2 2 130 25 169 4.23e-36 129
MS.gene80843.t1 AT4G28530 50.781 128 45 2 5 114 10 137 8.96e-33 124
MS.gene80843.t1 AT2G33480 55.556 99 42 1 58 154 8 106 9.42e-31 115
MS.gene80843.t1 AT1G02230 37.915 211 116 8 6 207 4 208 3.97e-29 115
MS.gene80843.t1 AT3G44350 37.576 165 94 5 1 156 1 165 2.03e-28 110
MS.gene80843.t1 AT3G04420 39.474 152 81 4 6 151 4 150 2.32e-28 111
MS.gene80843.t1 AT5G64530 34.884 172 82 4 4 157 2 161 3.88e-28 108
MS.gene80843.t1 AT3G04420 39.474 152 81 4 6 151 4 150 8.93e-28 111
MS.gene80843.t1 AT4G01520 40.909 154 81 6 6 152 5 155 2.50e-27 108
MS.gene80843.t1 AT5G64530 41.221 131 63 3 4 132 2 120 3.27e-26 102
MS.gene80843.t1 AT4G01540 36.612 183 103 7 8 183 7 183 3.48e-26 107
MS.gene80843.t1 AT4G01540 40.789 152 80 6 8 152 7 155 4.69e-26 107
MS.gene80843.t1 AT4G01540 36.612 183 103 7 8 183 7 183 5.34e-26 107
MS.gene80843.t1 AT4G01540 40.789 152 80 6 8 152 7 155 6.15e-26 107
MS.gene80843.t1 AT5G22380 36.527 167 95 5 1 156 1 167 7.01e-26 103
MS.gene80843.t1 AT3G44350 40.741 135 74 4 1 129 1 135 1.26e-25 100
MS.gene80843.t1 AT4G01550 38.667 150 83 5 8 151 7 153 5.51e-24 102
MS.gene80843.t1 AT3G10490 59.740 77 28 1 78 151 2 78 6.26e-24 100
MS.gene80843.t1 AT3G10490 59.740 77 28 1 78 151 2 78 6.26e-24 100
MS.gene80843.t1 AT2G18060 56.522 69 30 0 83 151 2 70 3.06e-23 97.4
MS.gene80843.t1 AT1G02250 41.538 130 66 4 6 128 4 130 8.18e-23 97.8
MS.gene80843.t1 AT1G02220 40.945 127 68 3 6 128 4 127 9.64e-23 98.2
MS.gene80843.t1 AT1G01010 38.037 163 76 8 1 148 1 153 3.40e-22 96.7
MS.gene80843.t1 AT5G14000 34.161 161 101 3 4 162 14 171 3.34e-20 87.4
MS.gene80843.t1 AT2G43000 40.625 96 54 1 66 158 1 96 5.65e-20 86.7
MS.gene80843.t1 AT5G14000 36.434 129 78 2 4 130 14 140 2.10e-18 81.3
MS.gene80843.t1 AT3G56530 30.405 148 100 2 5 149 52 199 7.49e-18 83.2
MS.gene80843.t1 AT5G50820 36.090 133 69 5 4 130 16 138 2.65e-17 79.3
MS.gene80843.t1 AT5G22290 40.230 87 43 2 84 165 2 84 1.52e-15 75.5
MS.gene80843.t1 AT3G55210 30.357 168 97 7 5 156 11 174 1.08e-14 73.6
MS.gene80843.t1 AT3G04430 35.878 131 70 5 11 128 6 135 1.59e-13 68.9
MS.gene80843.t1 AT5G14490 26.210 248 150 8 5 223 55 298 2.79e-13 70.1
MS.gene80843.t1 AT5G14490 26.210 248 150 8 5 223 58 301 2.86e-13 70.1
MS.gene80843.t1 AT5G14490 26.210 248 150 8 5 223 58 301 3.55e-13 70.1
MS.gene80843.t1 AT1G25580 32.353 170 91 8 4 160 57 215 4.04e-13 70.1
MS.gene80843.t1 AT4G29230 31.892 185 93 8 5 164 47 223 4.18e-13 70.1
MS.gene80843.t1 AT4G29230 31.892 185 93 8 5 164 48 224 4.26e-13 70.1
MS.gene80843.t1 AT1G28470 31.148 183 97 8 4 167 76 248 4.73e-13 69.3
MS.gene80843.t1 AT4G29230 31.892 185 93 8 5 164 48 224 4.82e-13 70.1
MS.gene80843.t1 AT5G14490 31.944 144 80 4 4 130 54 196 5.75e-13 68.6
MS.gene80843.t1 AT5G56620 31.609 174 87 7 4 149 42 211 2.54e-12 67.8
MS.gene80843.t1 AT5G56620 31.609 174 87 7 4 149 42 211 2.73e-12 67.4
MS.gene80843.t1 AT5G56620 29.500 200 109 7 4 175 42 237 3.36e-12 67.0

Find 67 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTACTGAAATATTATT+TGG 0.156112 6.2:+82874917 None:intergenic
ACAAGAGCAACCATTCAATT+TGG 0.264812 6.2:-82874699 MS.gene80843:CDS
ACCTCAATAGTGAATGAATT+TGG 0.270479 6.2:-82875133 MS.gene80843:CDS
ACCAATCGAGCCACTGAATC+AGG 0.295623 6.2:-82876172 MS.gene80843:CDS
CATTCAATTTGGACTCCATT+TGG 0.322744 6.2:-82874688 MS.gene80843:CDS
GTTGTGTCACATGGAGATTC+TGG 0.325153 6.2:+82875154 None:intergenic
GTTGAGCTTCCAAATCTAAA+TGG 0.329477 6.2:-82875106 MS.gene80843:CDS
CAAGGGGTGAGAAAAGTAAT+TGG 0.333069 6.2:-82876054 MS.gene80843:CDS
TGTGAACCTTGGGACCTTCC+AGG 0.334984 6.2:-82877160 MS.gene80843:intron
AGGATGAATGGGTGGTTTGT+AGG 0.337985 6.2:-82875231 MS.gene80843:CDS
ACATGAATTTGACAATGAAT+TGG 0.349230 6.2:-82874991 MS.gene80843:CDS
TTTGTAATACCATTTAGATT+TGG 0.362526 6.2:+82875097 None:intergenic
AATATTTCGTGGTGGAGTTT+TGG 0.365969 6.2:-82876119 MS.gene80843:CDS
TTTGGATTAAGCAAGTTAGA+AGG 0.390098 6.2:+82874935 None:intergenic
GGATGAATGGGTGGTTTGTA+GGG 0.397208 6.2:-82875230 MS.gene80843:CDS
ATCAACAACTGCAACAGCTT+TGG 0.405014 6.2:+82877192 None:intergenic
ACCAAATTCATTCACTATTG+AGG 0.421602 6.2:+82875132 None:intergenic
CCCTGATTCAGTGGCTCGAT+TGG 0.425214 6.2:+82876171 None:intergenic
TCATACAGGTAAGGCTTCAA+TGG 0.427731 6.2:-82876254 MS.gene80843:intron
TTCTAAAAGCATTACAACTT+AGG 0.444682 6.2:-82874889 MS.gene80843:CDS
ACTCCTTGTTGAGGCATGTA+TGG 0.449948 6.2:+82874818 None:intergenic
CTTTAAACAACTTCACCAAA+TGG 0.452085 6.2:+82874673 None:intergenic
CATACAGGTAAGGCTTCAAT+GGG 0.463734 6.2:-82876253 MS.gene80843:intron
GAGCCACTGAATCAGGGTAT+TGG 0.473159 6.2:-82876165 MS.gene80843:CDS
AGAGATAGAAAATATCCAAC+TGG 0.474047 6.2:-82876202 MS.gene80843:CDS
TACTTAGATCAGTTCCAAGT+TGG 0.477373 6.2:+82874783 None:intergenic
TTATAAGGGTAGGGCTCCAA+GGG 0.492314 6.2:-82876071 MS.gene80843:CDS
GTGATGAGTTCTTCATCTGT+TGG 0.493082 6.2:+82877256 None:intergenic
CAAATGGAGTCCAAATTGAA+TGG 0.497221 6.2:+82874689 None:intergenic
TCTCAACAAGTGTGAACCTT+GGG 0.498360 6.2:-82877170 MS.gene80843:CDS
GGATTCACCAACATTATTCA+AGG 0.498909 6.2:-82875058 MS.gene80843:CDS
CCCTACCCTTATAAAACACT+AGG 0.512291 6.2:+82876080 None:intergenic
AAGGGGTGAGAAAAGTAATT+GGG 0.515394 6.2:-82876053 MS.gene80843:CDS
GAAAACCACTGGAAAAGATA+AGG 0.516873 6.2:-82876143 MS.gene80843:CDS
TTTATAAGGGTAGGGCTCCA+AGG 0.519624 6.2:-82876072 MS.gene80843:CDS
GGTTGCTCTTGTTGATGCTG+TGG 0.527873 6.2:+82874710 None:intergenic
TCAGGGTATTGGAAAACCAC+TGG 0.536184 6.2:-82876154 MS.gene80843:CDS
ACTATTGAGGTTGTGTCACA+TGG 0.536553 6.2:+82875145 None:intergenic
TTTCCAATACCCTGATTCAG+TGG 0.541052 6.2:+82876162 None:intergenic
TGCAACAGCTTTGGATGTGA+AGG 0.542646 6.2:+82877201 None:intergenic
ATGGAGGAAAATCTACCTCC+TGG 0.544862 6.2:-82877292 MS.gene80843:CDS
AAAGATAAGGAAATATTTCG+TGG 0.545961 6.2:-82876130 MS.gene80843:CDS
TTAGAAGGCCATGGTAGAGA+TGG 0.548422 6.2:+82874950 None:intergenic
TGTTTGTCCTTGAATAATGT+TGG 0.550492 6.2:+82875051 None:intergenic
TTACCTTTGAAGTTCGAAAG+TGG 0.550555 6.2:+82875999 None:intergenic
TGGGAAAATGATGTTTGTTG+TGG 0.550859 6.2:+82875178 None:intergenic
ACACCACTTTCGAACTTCAA+AGG 0.552288 6.2:-82876002 MS.gene80843:intron
GTCACATGGAGATTCTGGTT+GGG 0.559177 6.2:+82875159 None:intergenic
GTAATATCTCATCACCAACT+TGG 0.564072 6.2:-82874797 MS.gene80843:CDS
CGATTGGTTCTAAGTCCAGT+TGG 0.570705 6.2:+82876187 None:intergenic
ATCTCAACAAGTGTGAACCT+TGG 0.575709 6.2:-82877171 MS.gene80843:CDS
GATGGAACATGACTTGAAGA+TGG 0.579781 6.2:+82874968 None:intergenic
AAATAACCTGGAAGGTCCCA+AGG 0.580335 6.2:+82877154 None:intergenic
TGTCACATGGAGATTCTGGT+TGG 0.585895 6.2:+82875158 None:intergenic
CCTACCCTTATAAAACACTA+GGG 0.590419 6.2:+82876081 None:intergenic
TTAAGCAAGTTAGAAGGCCA+TGG 0.601623 6.2:+82874941 None:intergenic
ACAAATTCATCATCTTCATG+TGG 0.605409 6.2:-82875079 MS.gene80843:CDS
CCAATCGAGCCACTGAATCA+GGG 0.616010 6.2:-82876171 MS.gene80843:CDS
TGAGATATTACTCCTTGTTG+AGG 0.618801 6.2:+82874809 None:intergenic
GCACCATACATGCCTCAACA+AGG 0.631430 6.2:-82874821 MS.gene80843:CDS
TACAGGTAAGGCTTCAATGG+GGG 0.647295 6.2:-82876251 MS.gene80843:intron
GTCATGTTCCATCTCTACCA+TGG 0.649805 6.2:-82874958 MS.gene80843:CDS
GATAAGGAAATATTTCGTGG+TGG 0.655075 6.2:-82876127 MS.gene80843:CDS
GTTGGATGAAACCTAAAACC+AGG 0.669523 6.2:+82877274 None:intergenic
TATAAGGGTAGGGCTCCAAG+GGG 0.710910 6.2:-82876070 MS.gene80843:CDS
GGATGAAACCTAAAACCAGG+AGG 0.726374 6.2:+82877277 None:intergenic
ATACAGGTAAGGCTTCAATG+GGG 0.739241 6.2:-82876252 MS.gene80843:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GCAATTTTTTTTTTTTTTTT+TGG - chr6.2:82874995-82875014 MS.gene80843:CDS 10.0%
!!! TAAAATTTTATTTTTCTTTG+AGG - chr6.2:82875267-82875286 MS.gene80843:intron 10.0%
!!! TAGTAATCATATAATTTTTA+TGG + chr6.2:82876192-82876211 None:intergenic 10.0%
!! AAAATACTAGATTTCATATA+TGG - chr6.2:82876695-82876714 MS.gene80843:intron 15.0%
!! AAACTATTTACTTATTAACA+AGG + chr6.2:82876565-82876584 None:intergenic 15.0%
!! ACTAAGAAAATATTAAAACA+TGG + chr6.2:82876036-82876055 None:intergenic 15.0%
!! CACAAATTCAAAATATATTA+TGG - chr6.2:82875499-82875518 MS.gene80843:intron 15.0%
!! CTAAGAAAATATTAAAACAT+GGG + chr6.2:82876035-82876054 None:intergenic 15.0%
!! GAATTTACTGAAATATTATT+TGG + chr6.2:82877063-82877082 None:intergenic 15.0%
!!! ATTTTTATGGAAAGTTTTTA+AGG + chr6.2:82876179-82876198 None:intergenic 15.0%
!!! CAACTCTTTAAAAAAATTAA+TGG - chr6.2:82875527-82875546 MS.gene80843:intron 15.0%
!!! TATTTTGAAAATTAGTTACA+TGG + chr6.2:82875472-82875491 None:intergenic 15.0%
!!! TTAGTATAGTATTATTTTGT+TGG - chr6.2:82876097-82876116 MS.gene80843:CDS 15.0%
!!! TTTTGGAAATTATTATTAGA+AGG - chr6.2:82875012-82875031 MS.gene80843:CDS 15.0%
!! AATAATTAATCATGTTTGTG+TGG - chr6.2:82875692-82875711 MS.gene80843:intron 20.0%
!! ATATAGACAAATTAAGAGAA+AGG + chr6.2:82875154-82875173 None:intergenic 20.0%
!! TAACAAAAGTTGACATTAAT+TGG - chr6.2:82875563-82875582 MS.gene80843:intron 20.0%
!! TTTGTAATACCATTTAGATT+TGG + chr6.2:82876883-82876902 None:intergenic 20.0%
!!! AACTCATTTTAGTTTTTACA+AGG - chr6.2:82876063-82876082 MS.gene80843:CDS 20.0%
!!! AGCTTTTGTATATATTGATT+TGG - chr6.2:82875301-82875320 MS.gene80843:intron 20.0%
!!! GAATATTTTGATTACTATGT+TGG - chr6.2:82876476-82876495 MS.gene80843:intron 20.0%
!!! GCTTTTGTATATATTGATTT+GGG - chr6.2:82875302-82875321 MS.gene80843:intron 20.0%
!!! GTTATTTTCAAAGTAAGAAT+GGG + chr6.2:82875440-82875459 None:intergenic 20.0%
! AAAAAAGTTACGAGACTTTA+TGG - chr6.2:82876305-82876324 MS.gene80843:intron 25.0%
! AAAGATAAGGAAATATTTCG+TGG - chr6.2:82875847-82875866 MS.gene80843:intron 25.0%
! ACATGAATTTGACAATGAAT+TGG - chr6.2:82876986-82877005 MS.gene80843:intron 25.0%
! AGATATGAACAAAAATAACC+TGG + chr6.2:82874838-82874857 None:intergenic 25.0%
! TCGACTAAACTTAATTTAGA+AGG - chr6.2:82874970-82874989 MS.gene80843:CDS 25.0%
!! AAAACCCTAGTGTTTTATAA+GGG - chr6.2:82875892-82875911 MS.gene80843:intron 25.0%
!! TAACATTTTGCAATTTTTGC+AGG - chr6.2:82876726-82876745 MS.gene80843:intron 25.0%
!! TGTTTGATTGTAGATTTTCA+AGG - chr6.2:82874936-82874955 MS.gene80843:CDS 25.0%
!! TTTTTGTTGATATGCTCTTT+TGG + chr6.2:82876777-82876796 None:intergenic 25.0%
!!! GGTTATTTTCAAAGTAAGAA+TGG + chr6.2:82875441-82875460 None:intergenic 25.0%
!!! GTATAGTATTATTTTGTTGG+TGG - chr6.2:82876100-82876119 MS.gene80843:CDS 25.0%
!!! TTAATAGTCGATTTTCTCTT+TGG - chr6.2:82876630-82876649 MS.gene80843:intron 25.0%
!!! TTATGGAAAGTTTTTAAGGA+TGG + chr6.2:82876175-82876194 None:intergenic 25.0%
!!! TTCTAAAAGCATTACAACTT+AGG - chr6.2:82877088-82877107 MS.gene80843:intron 25.0%
ACAAATTCATCATCTTCATG+TGG - chr6.2:82876898-82876917 MS.gene80843:intron 30.0%
ACCAAATTCATTCACTATTG+AGG + chr6.2:82876848-82876867 None:intergenic 30.0%
ACCAATAATCAACAAAGTCT+TGG - chr6.2:82875367-82875386 MS.gene80843:intron 30.0%
ACCTCAATAGTGAATGAATT+TGG - chr6.2:82876844-82876863 MS.gene80843:intron 30.0%
AGAGATAGAAAATATCCAAC+TGG - chr6.2:82875775-82875794 MS.gene80843:intron 30.0%
ATGAACAAAAATAACCTGGA+AGG + chr6.2:82874834-82874853 None:intergenic 30.0%
ATTAGTTACATGGTGTACTT+AGG + chr6.2:82875462-82875481 None:intergenic 30.0%
GTGTATAATTCATACAGGTA+AGG - chr6.2:82875714-82875733 MS.gene80843:intron 30.0%
TGTTTGTCCTTGAATAATGT+TGG + chr6.2:82876929-82876948 None:intergenic 30.0%
TTTGGATTAAGCAAGTTAGA+AGG + chr6.2:82877045-82877064 None:intergenic 30.0%
! ACCAAGACTTTGTTGATTAT+TGG + chr6.2:82875371-82875390 None:intergenic 30.0%
! GAAAACCCTAGTGTTTTATA+AGG - chr6.2:82875891-82875910 MS.gene80843:intron 30.0%
! TATTTCCTTATCTTTTCCAG+TGG + chr6.2:82875842-82875861 None:intergenic 30.0%
! TTGTCTTGCATTTTCGAAAA+CGG + chr6.2:82876602-82876621 None:intergenic 30.0%
!! AAGTTTTTAAGGATGGCTTA+TGG + chr6.2:82876168-82876187 None:intergenic 30.0%
!! TAGTATTATTTTGTTGGTGG+TGG - chr6.2:82876103-82876122 MS.gene80843:CDS 30.0%
AAGGGGTGAGAAAAGTAATT+GGG - chr6.2:82875924-82875943 MS.gene80843:intron 35.0%
ACAAGAGCAACCATTCAATT+TGG - chr6.2:82877278-82877297 MS.gene80843:CDS 35.0%
CAAATGGAGTCCAAATTGAA+TGG + chr6.2:82877291-82877310 None:intergenic 35.0%
CATTCAATTTGGACTCCATT+TGG - chr6.2:82877289-82877308 MS.gene80843:CDS 35.0%
CCTACCCTTATAAAACACTA+GGG + chr6.2:82875899-82875918 None:intergenic 35.0%
GAAAACCACTGGAAAAGATA+AGG - chr6.2:82875834-82875853 MS.gene80843:intron 35.0%
GATAAGGAAATATTTCGTGG+TGG - chr6.2:82875850-82875869 MS.gene80843:intron 35.0%
GGATTCACCAACATTATTCA+AGG - chr6.2:82876919-82876938 MS.gene80843:intron 35.0%
GTAATATCTCATCACCAACT+TGG - chr6.2:82877180-82877199 MS.gene80843:CDS 35.0%
GTGTGGTGTATAATTCATAC+AGG - chr6.2:82875709-82875728 MS.gene80843:intron 35.0%
GTTGAGCTTCCAAATCTAAA+TGG - chr6.2:82876871-82876890 MS.gene80843:intron 35.0%
TACTTAGATCAGTTCCAAGT+TGG + chr6.2:82877197-82877216 None:intergenic 35.0%
TGAGATATTACTCCTTGTTG+AGG + chr6.2:82877171-82877190 None:intergenic 35.0%
! CCTAGTGTTTTATAAGGGTA+GGG - chr6.2:82875897-82875916 MS.gene80843:intron 35.0%
! GCAATTTTTGCAGGATGAAT+GGG - chr6.2:82876735-82876754 MS.gene80843:intron 35.0%
! TGCAATTTTTGCAGGATGAA+TGG - chr6.2:82876734-82876753 MS.gene80843:intron 35.0%
! TGGGAAAATGATGTTTGTTG+TGG + chr6.2:82876802-82876821 None:intergenic 35.0%
!! AAAATCTACCTCCTGGTTTT+AGG - chr6.2:82874692-82874711 MS.gene80843:CDS 35.0%
!! AATATTTCGTGGTGGAGTTT+TGG - chr6.2:82875858-82875877 MS.gene80843:intron 35.0%
!! TTACCTTTGAAGTTCGAAAG+TGG + chr6.2:82875981-82876000 None:intergenic 35.0%
ACACCACTTTCGAACTTCAA+AGG - chr6.2:82875975-82875994 MS.gene80843:intron 40.0%
ACTATTGAGGTTGTGTCACA+TGG + chr6.2:82876835-82876854 None:intergenic 40.0%
ATACAGGTAAGGCTTCAATG+GGG - chr6.2:82875725-82875744 MS.gene80843:intron 40.0%
ATCAACAACTGCAACAGCTT+TGG + chr6.2:82874788-82874807 None:intergenic 40.0%
ATCACTAAATCAGACGCTAG+AGG - chr6.2:82876448-82876467 MS.gene80843:intron 40.0%
ATCTCAACAAGTGTGAACCT+TGG - chr6.2:82874806-82874825 MS.gene80843:CDS 40.0%
ATGGCTTATGGCTTATGGTT+GGG + chr6.2:82876156-82876175 None:intergenic 40.0%
CAAGGGGTGAGAAAAGTAAT+TGG - chr6.2:82875923-82875942 MS.gene80843:intron 40.0%
CATACAGGTAAGGCTTCAAT+GGG - chr6.2:82875724-82875743 MS.gene80843:intron 40.0%
CCCTACCCTTATAAAACACT+AGG + chr6.2:82875900-82875919 None:intergenic 40.0%
GATGGAACATGACTTGAAGA+TGG + chr6.2:82877012-82877031 None:intergenic 40.0%
GTGATGAGTTCTTCATCTGT+TGG + chr6.2:82874724-82874743 None:intergenic 40.0%
GTTGGATGAAACCTAAAACC+AGG + chr6.2:82874706-82874725 None:intergenic 40.0%
TAAGGATGGCTTATGGCTTA+TGG + chr6.2:82876161-82876180 None:intergenic 40.0%
TATGGCTTATGGTTGGGTAA+AGG + chr6.2:82876150-82876169 None:intergenic 40.0%
TCATACAGGTAAGGCTTCAA+TGG - chr6.2:82875723-82875742 MS.gene80843:intron 40.0%
TCTCAACAAGTGTGAACCTT+GGG - chr6.2:82874807-82874826 MS.gene80843:CDS 40.0%
TTAAGCAAGTTAGAAGGCCA+TGG + chr6.2:82877039-82877058 None:intergenic 40.0%
TTTCCAATACCCTGATTCAG+TGG + chr6.2:82875818-82875837 None:intergenic 40.0%
! ATTTTTGCAGGATGAATGGG+TGG - chr6.2:82876738-82876757 MS.gene80843:intron 40.0%
! CCCTAGTGTTTTATAAGGGT+AGG - chr6.2:82875896-82875915 MS.gene80843:intron 40.0%
!! CAATTACTTTTCTCACCCCT+TGG + chr6.2:82875925-82875944 None:intergenic 40.0%
AAATAACCTGGAAGGTCCCA+AGG + chr6.2:82874826-82874845 None:intergenic 45.0%
ACTCCTTGTTGAGGCATGTA+TGG + chr6.2:82877162-82877181 None:intergenic 45.0%
ATGGAGGAAAATCTACCTCC+TGG - chr6.2:82874685-82874704 MS.gene80843:CDS 45.0%
GATGGCTTATGGCTTATGGT+TGG + chr6.2:82876157-82876176 None:intergenic 45.0%
GGATGAAACCTAAAACCAGG+AGG + chr6.2:82874703-82874722 None:intergenic 45.0%
GTCATGTTCCATCTCTACCA+TGG - chr6.2:82877019-82877038 MS.gene80843:intron 45.0%
GTTGTGTCACATGGAGATTC+TGG + chr6.2:82876826-82876845 None:intergenic 45.0%
TACAGGTAAGGCTTCAATGG+GGG - chr6.2:82875726-82875745 MS.gene80843:intron 45.0%
TGTCACATGGAGATTCTGGT+TGG + chr6.2:82876822-82876841 None:intergenic 45.0%
TTAGAAGGCCATGGTAGAGA+TGG + chr6.2:82877030-82877049 None:intergenic 45.0%
TTATAAGGGTAGGGCTCCAA+GGG - chr6.2:82875906-82875925 MS.gene80843:intron 45.0%
TTTATAAGGGTAGGGCTCCA+AGG - chr6.2:82875905-82875924 MS.gene80843:intron 45.0%
! AGGATGAATGGGTGGTTTGT+AGG - chr6.2:82876746-82876765 MS.gene80843:intron 45.0%
! GGATGAATGGGTGGTTTGTA+GGG - chr6.2:82876747-82876766 MS.gene80843:intron 45.0%
! GTCACATGGAGATTCTGGTT+GGG + chr6.2:82876821-82876840 None:intergenic 45.0%
!! CGATTGGTTCTAAGTCCAGT+TGG + chr6.2:82875793-82875812 None:intergenic 45.0%
!! TCAGGGTATTGGAAAACCAC+TGG - chr6.2:82875823-82875842 MS.gene80843:intron 45.0%
!! TGCAACAGCTTTGGATGTGA+AGG + chr6.2:82874779-82874798 None:intergenic 45.0%
!! TTTCGTGGTGGAGTTTTGGT+AGG - chr6.2:82875862-82875881 MS.gene80843:intron 45.0%
!! AAAACTATAAAAATTAATTA+TGG + chr6.2:82876237-82876256 None:intergenic 5.0%
!! ATATATATATAACAAAAAAA+AGG + chr6.2:82874880-82874899 None:intergenic 5.0%
!! TATATATATAACAAAAAAAA+GGG + chr6.2:82874879-82874898 None:intergenic 5.0%
!! TTTATATATAAGTTATTAAT+TGG + chr6.2:82875222-82875241 None:intergenic 5.0%
!!! AATATTATTAATTACTTTTT+TGG - chr6.2:82875110-82875129 MS.gene80843:CDS 5.0%
!!! TAACATATATTTTTTTTAAA+TGG - chr6.2:82876666-82876685 MS.gene80843:intron 5.0%
!!! TTATATATAAGTTTTTTTTT+GGG + chr6.2:82875250-82875269 None:intergenic 5.0%
!!! TTTATATATAAGTTTTTTTT+TGG + chr6.2:82875251-82875270 None:intergenic 5.0%
ACCAATCGAGCCACTGAATC+AGG - chr6.2:82875805-82875824 MS.gene80843:intron 50.0%
CCAATCGAGCCACTGAATCA+GGG - chr6.2:82875806-82875825 MS.gene80843:intron 50.0%
CTTCAATGGGGGAGAAGGAA+TGG - chr6.2:82875737-82875756 MS.gene80843:intron 50.0%
GAGCCACTGAATCAGGGTAT+TGG - chr6.2:82875812-82875831 MS.gene80843:intron 50.0%
GCACCATACATGCCTCAACA+AGG - chr6.2:82877156-82877175 MS.gene80843:intron 50.0%
GGTTGCTCTTGTTGATGCTG+TGG + chr6.2:82877270-82877289 None:intergenic 50.0%
TAAGGCTTCAATGGGGGAGA+AGG - chr6.2:82875732-82875751 MS.gene80843:intron 50.0%
TATAAGGGTAGGGCTCCAAG+GGG - chr6.2:82875907-82875926 MS.gene80843:intron 50.0%
CCCTGATTCAGTGGCTCGAT+TGG + chr6.2:82875809-82875828 None:intergenic 55.0%
TGTGAACCTTGGGACCTTCC+AGG - chr6.2:82874817-82874836 MS.gene80843:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 82874685 82877314 82874685 ID=MS.gene80843
chr6.2 mRNA 82874685 82877314 82874685 ID=MS.gene80843.t1;Parent=MS.gene80843
chr6.2 exon 82877161 82877314 82877161 ID=MS.gene80843.t1.exon1;Parent=MS.gene80843.t1
chr6.2 CDS 82877161 82877314 82877161 ID=cds.MS.gene80843.t1;Parent=MS.gene80843.t1
chr6.2 exon 82876003 82876268 82876003 ID=MS.gene80843.t1.exon2;Parent=MS.gene80843.t1
chr6.2 CDS 82876003 82876268 82876003 ID=cds.MS.gene80843.t1;Parent=MS.gene80843.t1
chr6.2 exon 82874685 82875251 82874685 ID=MS.gene80843.t1.exon3;Parent=MS.gene80843.t1
chr6.2 CDS 82874685 82875251 82874685 ID=cds.MS.gene80843.t1;Parent=MS.gene80843.t1
Gene Sequence

>MS.gene80843

ATGGAGGAAAATCTACCTCCTGGTTTTAGGTTTCATCCAACAGATGAAGAACTCATCACACACTATCTTACAATGAAAATTTCTGATACTTCCTTCACATCCAAAGCTGTTGCAGTTGTTGATCTCAACAAGTGTGAACCTTGGGACCTTCCAGGTTATTTTTGTTCATATCTCTCTTTCTTAAAAACTATCCCTTTTTTTTGTTATATATATATATATATATATATATATATATATATATATATATATATTGTTTGATTGTAGATTTTCAAGGAGTTTTAGTCTTCGACTAAACTTAATTTAGAAGGATGCAATTTTTTTTTTTTTTTTTGGAAATTATTATTAGAAGGATTGCAACTTGTTGATGAATATATGTGTTTATATATAAACTAATTCAAGATTTGAAGAAATTTTAAATAATAAACAATATTATTAATTACTTTTTTGGTTAATTAAGAGTTAACATCCTTTCTCTTAATTTGTCTATATGATTATTCAATTCAATTTTATTTTTCACTAGCTTAAATTTCTTAACCAATTAATAACTTATATATAAAATTCTCCCAAAAAAAAACTTATATATAAAATTTTATTTTTCTTTGAGGAAATAAAATTAAGCTTTTGTATATATTGATTTGGGAGATGAAAATTGATCATTTATATCTCTTTTTTAGTTTTATAAACCAATAATCAACAAAGTCTTGGTTATTTTGCTTTTATGTCTCTTAATTCATTACTATATAGTAGCTTGACCCATTCTTACTTTGAAAATAACCTAAGTACACCATGTAACTAATTTTCAAAATATAACACACACAAATTCAAAATATATTATGGTATTTCAACTCTTTAAAAAAATTAATGGTTAGTTTGAATAGTAACAAAAGTTGACATTAATTGGTATAGCTACTAGCTGATTCGTTTGCTTATAAAAATAAAGTAACAAACTTGACATTAATTGATATAGCTACTAGATATTTTTTTATTTAGTGAACACAAAATCAATAAATAATTAATCATGTTTGTGTGGTGTATAATTCATACAGGTAAGGCTTCAATGGGGGAGAAGGAATGGTATTTTTTCAGTGTGAGAGATAGAAAATATCCAACTGGACTTAGAACCAATCGAGCCACTGAATCAGGGTATTGGAAAACCACTGGAAAAGATAAGGAAATATTTCGTGGTGGAGTTTTGGTAGGAATGAAGAAAACCCTAGTGTTTTATAAGGGTAGGGCTCCAAGGGGTGAGAAAAGTAATTGGGTCATGCATGAATATAGACTAGAAAACAAACACCACTTTCGAACTTCAAAGGTAAGTGCTCTACATTGCATTGCATTGCATTCATTCCCATGTTTTAATATTTTCTTAGTCACATAAAACTCATTTTAGTTTTTACAAGGACAAATGTTAATTAGTATAGTATTATTTTGTTGGTGGTGGATCATCAAACTAATCTCAACTCCTTTACCCAACCATAAGCCATAAGCCATCCTTAAAAACTTTCCATAAAAATTATATGATTACTAATAATCATTTAATTTTAGTAGTCCATAATTAATTTTTATAGTTTTTTTGTACAATCAAAAGTGATATTTGTCAAGATAAAATAACAAATTGAGAAAAAAGTTACGAGACTTTATGGTTCGCTAACATTAACAACTAGTGATTTAAAAACATTTTTTACATTGATATCTACATCGATAAAAAACTCATTTAACATTCAATTTAACAATGATTTAGTGATTGAGTATTTGAAAATTCAATCACTAAATCAGACGCTAGAGGCACTAGAATATTTTGATTACTATGTTGGTCAATACATATCATTATTTTAAAAAAATACAAGATAATTGTTCATCTCAACAGTCTCTTTTCGCCTTGTTAATAAGTAAATAGTTTTTACAACATTTTCACCGTTTTCGAAAATGCAAGACAATCATTCATTTAATAGTCGATTTTCTCTTTGGTAACAAGTCAAATTAACATATATTTTTTTTAAATGGAAAGTGAAAATACTAGATTTCATATATGGTTGAGAATTAACATTTTGCAATTTTTGCAGGATGAATGGGTGGTTTGTAGGGTTTTCCAAAAGAGCATATCAACAAAAAAACCACAACAAACATCATTTTCCCAACCAGAATCTCCATGTGACACAACCTCAATAGTGAATGAATTTGGTGATGTTGAGCTTCCAAATCTAAATGGTATTACAAATTCATCATCTTCATGTGGATTCACCAACATTATTCAAGGACAAACATTCAACACTCATGATGATCTCAATAATGTTAACACAAACATGAATTTGACAATGAATTGGCCATCTTCAAGTCATGTTCCATCTCTACCATGGCCTTCTAACTTGCTTAATCCAAATAATATTTCAGTAAATTCATTACTTCTAAAAGCATTACAACTTAGGAATTATCAACATCAAAGAGAAGTTGCAGCTACAAATACTCATTTTGCACCATACATGCCTCAACAAGGAGTAATATCTCATCACCAACTTGGAACTGATCTAAGTAATAATTCAAATGATCTAAGTGCTTCTTCTTCAAAAGTTTTAGAGTGTATGCCACAGCATCAACAAGAGCAACCATTCAATTTGGACTCCATTTGGTGA
Protein sequence

>MS.gene80843.t1

MEENLPPGFRFHPTDEELITHYLTMKISDTSFTSKAVAVVDLNKCEPWDLPGKASMGEKEWYFFSVRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHHFRTSKDEWVVCRVFQKSISTKKPQQTSFSQPESPCDTTSIVNEFGDVELPNLNGITNSSSSCGFTNIIQGQTFNTHDDLNNVNTNMNLTMNWPSSSHVPSLPWPSNLLNPNNISVNSLLLKALQLRNYQHQREVAATNTHFAPYMPQQGVISHHQLGTDLSNNSNDLSASSSKVLECMPQHQQEQPFNLDSIW