Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055381.t1 | XP_013443816.1 | 94.5 | 727 | 35 | 3 | 1 | 726 | 1 | 723 | 0.00E+00 | 1297.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055381.t1 | Q93YU8 | 53.0 | 815 | 275 | 12 | 1 | 726 | 1 | 796 | 3.9e-208 | 726.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055381.t1 | A0A072TKX3 | 94.5 | 727 | 35 | 3 | 1 | 726 | 1 | 723 | 0.0e+00 | 1297.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055381 | MS.gene061357 | 0.810403 | 1.17E-50 | -1.69E-46 |
| MS.gene055381 | MS.gene71698 | 0.814623 | 1.40E-51 | -1.69E-46 |
| MS.gene055381 | MS.gene91781 | 0.807769 | 4.30E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055381.t1 | MTR_8g006850 | 94.498 | 727 | 35 | 3 | 1 | 726 | 1 | 723 | 0.0 | 1363 |
| MS.gene055381.t1 | MTR_7g081705 | 68.998 | 529 | 131 | 6 | 223 | 726 | 323 | 843 | 0.0 | 702 |
| MS.gene055381.t1 | MTR_5g022530 | 39.341 | 455 | 241 | 9 | 280 | 722 | 204 | 635 | 1.18e-92 | 302 |
| MS.gene055381.t1 | MTR_5g022530 | 55.932 | 59 | 26 | 0 | 1 | 59 | 1 | 59 | 1.07e-11 | 68.6 |
| MS.gene055381.t1 | MTR_2g048360 | 31.195 | 452 | 276 | 8 | 280 | 722 | 208 | 633 | 3.48e-52 | 192 |
| MS.gene055381.t1 | MTR_3g109450 | 28.889 | 450 | 281 | 11 | 282 | 718 | 277 | 700 | 4.39e-52 | 193 |
| MS.gene055381.t1 | MTR_2g102050 | 28.733 | 442 | 298 | 9 | 272 | 708 | 309 | 738 | 2.11e-48 | 183 |
| MS.gene055381.t1 | MTR_2g102050 | 57.627 | 59 | 25 | 0 | 1 | 59 | 1 | 59 | 2.64e-14 | 77.0 |
| MS.gene055381.t1 | MTR_3g088190 | 27.373 | 453 | 308 | 7 | 280 | 718 | 454 | 899 | 6.38e-44 | 171 |
| MS.gene055381.t1 | MTR_4g012430 | 31.540 | 409 | 250 | 11 | 273 | 675 | 119 | 503 | 5.92e-43 | 163 |
| MS.gene055381.t1 | MTR_1g112850 | 28.027 | 446 | 294 | 8 | 280 | 708 | 274 | 709 | 8.51e-42 | 163 |
| MS.gene055381.t1 | MTR_1g021280 | 78.095 | 105 | 18 | 2 | 34 | 138 | 32 | 131 | 7.41e-39 | 140 |
| MS.gene055381.t1 | MTR_5g098980 | 24.208 | 442 | 280 | 11 | 284 | 714 | 358 | 755 | 7.16e-27 | 117 |
| MS.gene055381.t1 | MTR_4g127620 | 26.849 | 365 | 235 | 8 | 250 | 600 | 316 | 662 | 9.25e-27 | 117 |
| MS.gene055381.t1 | MTR_5g087740 | 33.621 | 232 | 137 | 5 | 364 | 586 | 429 | 652 | 9.43e-25 | 110 |
| MS.gene055381.t1 | MTR_3g096950 | 27.536 | 345 | 236 | 6 | 365 | 708 | 433 | 764 | 1.08e-24 | 110 |
| MS.gene055381.t1 | MTR_2g036920 | 39.106 | 179 | 97 | 4 | 367 | 535 | 599 | 775 | 7.12e-24 | 108 |
| MS.gene055381.t1 | MTR_2g036920 | 39.106 | 179 | 97 | 4 | 367 | 535 | 570 | 746 | 7.41e-24 | 108 |
| MS.gene055381.t1 | MTR_8g091250 | 29.433 | 282 | 182 | 8 | 340 | 610 | 353 | 628 | 1.51e-23 | 106 |
| MS.gene055381.t1 | MTR_3g078830 | 32.751 | 229 | 147 | 3 | 364 | 588 | 445 | 670 | 6.94e-23 | 104 |
| MS.gene055381.t1 | MTR_8g015290 | 71.287 | 101 | 21 | 3 | 31 | 128 | 27 | 122 | 7.87e-21 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055381.t1 | AT1G02110 | 57.739 | 743 | 255 | 17 | 1 | 725 | 1 | 702 | 0.0 | 797 |
| MS.gene055381.t1 | AT3G60320 | 56.663 | 803 | 264 | 17 | 1 | 726 | 1 | 796 | 0.0 | 773 |
| MS.gene055381.t1 | AT3G51290 | 40.889 | 450 | 241 | 9 | 280 | 725 | 200 | 628 | 2.08e-95 | 309 |
| MS.gene055381.t1 | AT3G51290 | 41.111 | 450 | 240 | 9 | 280 | 725 | 200 | 628 | 1.05e-93 | 309 |
| MS.gene055381.t1 | AT3G51290 | 40.444 | 450 | 237 | 10 | 280 | 725 | 200 | 622 | 1.17e-89 | 294 |
| MS.gene055381.t1 | AT2G34670 | 34.605 | 367 | 223 | 6 | 353 | 718 | 324 | 674 | 9.48e-61 | 217 |
| MS.gene055381.t1 | AT5G25590 | 29.605 | 456 | 276 | 9 | 281 | 718 | 330 | 758 | 3.15e-53 | 197 |
| MS.gene055381.t1 | AT1G52320 | 29.314 | 423 | 278 | 9 | 291 | 708 | 34 | 440 | 1.16e-50 | 184 |
| MS.gene055381.t1 | AT1G52320 | 29.314 | 423 | 278 | 9 | 291 | 708 | 34 | 440 | 1.16e-50 | 184 |
| MS.gene055381.t1 | AT1G52320 | 29.314 | 423 | 278 | 9 | 291 | 708 | 337 | 743 | 5.53e-50 | 187 |
| MS.gene055381.t1 | AT1G52320 | 29.314 | 423 | 278 | 9 | 291 | 708 | 360 | 766 | 9.26e-50 | 187 |
| MS.gene055381.t1 | AT1G52320 | 29.314 | 423 | 278 | 9 | 291 | 708 | 360 | 766 | 9.26e-50 | 187 |
| MS.gene055381.t1 | AT1G21740 | 28.667 | 450 | 305 | 8 | 280 | 718 | 497 | 941 | 2.31e-45 | 175 |
| MS.gene055381.t1 | AT1G77500 | 27.655 | 452 | 284 | 9 | 280 | 718 | 449 | 870 | 8.29e-40 | 158 |
| MS.gene055381.t1 | AT2G34670 | 33.628 | 226 | 142 | 4 | 353 | 578 | 324 | 541 | 2.75e-32 | 132 |
| MS.gene055381.t1 | AT4G35240 | 24.777 | 448 | 297 | 7 | 280 | 722 | 419 | 831 | 1.10e-29 | 126 |
| MS.gene055381.t1 | AT4G35240 | 24.777 | 448 | 297 | 7 | 280 | 722 | 419 | 831 | 1.10e-29 | 126 |
| MS.gene055381.t1 | AT4G35240 | 24.777 | 448 | 297 | 7 | 280 | 722 | 419 | 831 | 1.46e-29 | 126 |
| MS.gene055381.t1 | AT4G35240 | 24.777 | 448 | 297 | 7 | 280 | 722 | 419 | 831 | 1.46e-29 | 126 |
| MS.gene055381.t1 | AT2G17110 | 28.940 | 349 | 226 | 9 | 259 | 592 | 289 | 630 | 1.99e-29 | 125 |
| MS.gene055381.t1 | AT2G27090 | 33.621 | 232 | 144 | 6 | 364 | 590 | 425 | 651 | 1.07e-24 | 110 |
| MS.gene055381.t1 | AT2G27090 | 33.621 | 232 | 144 | 6 | 364 | 590 | 425 | 651 | 1.07e-24 | 110 |
| MS.gene055381.t1 | AT1G20530 | 26.546 | 388 | 246 | 10 | 281 | 652 | 232 | 596 | 1.53e-23 | 106 |
| MS.gene055381.t1 | AT5G54480 | 25.616 | 406 | 245 | 11 | 245 | 624 | 270 | 644 | 1.91e-23 | 106 |
| MS.gene055381.t1 | AT4G39790 | 31.696 | 224 | 146 | 5 | 367 | 586 | 375 | 595 | 2.72e-22 | 102 |
| MS.gene055381.t1 | AT4G30130 | 31.429 | 245 | 153 | 5 | 367 | 600 | 401 | 641 | 1.20e-21 | 100 |
| MS.gene055381.t1 | AT4G30130 | 31.429 | 245 | 153 | 5 | 367 | 600 | 401 | 641 | 1.20e-21 | 100 |
| MS.gene055381.t1 | AT2G19090 | 30.364 | 247 | 155 | 5 | 367 | 600 | 482 | 724 | 3.76e-21 | 99.4 |
| MS.gene055381.t1 | AT4G30130 | 43.210 | 81 | 45 | 1 | 367 | 447 | 401 | 480 | 1.06e-11 | 68.6 |
| MS.gene055381.t1 | AT4G30130 | 43.210 | 81 | 45 | 1 | 367 | 447 | 401 | 480 | 1.06e-11 | 68.6 |
Find 160 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATAAATTACCTACTTTA+TGG | 0.098163 | 8.1:+86905275 | None:intergenic |
| TGCCGGAAATATTCGGAATT+TGG | 0.192821 | 8.1:+86909084 | None:intergenic |
| CAGCTGCCATCAATGGTCTT+AGG | 0.218432 | 8.1:-86907273 | MS.gene055381:CDS |
| CTCCAAATTCCGAATATTTC+CGG | 0.231370 | 8.1:-86909086 | MS.gene055381:CDS |
| TCCGAAGATGTATCGGATTC+TGG | 0.255099 | 8.1:+86909027 | None:intergenic |
| CCAATATCTTCCACAGAGTT+TGG | 0.255194 | 8.1:+86905525 | None:intergenic |
| CTCCACTTTGGACCGGCTTT+TGG | 0.260704 | 8.1:-86908271 | MS.gene055381:CDS |
| GTCAAGAACTCAAGATTAAA+AGG | 0.266491 | 8.1:-86905653 | MS.gene055381:CDS |
| CCAAACTCTGTGGAAGATAT+TGG | 0.303854 | 8.1:-86905525 | MS.gene055381:CDS |
| ATGGGAAAACAAACTCTTTC+AGG | 0.306558 | 8.1:-86908247 | MS.gene055381:CDS |
| AAACTTCTTCCGTTTGGAAC+TGG | 0.310325 | 8.1:-86909134 | MS.gene055381:CDS |
| AGGTTTGCCTGGAATGTTTC+AGG | 0.312214 | 8.1:-86905361 | MS.gene055381:CDS |
| CGGAGATGTTGCAGATTAGT+AGG | 0.332632 | 8.1:-86908651 | MS.gene055381:CDS |
| AGAACGTTGCCGGAAATATT+CGG | 0.340163 | 8.1:+86909077 | None:intergenic |
| TCATATTCTATGGTTGGTAT+TGG | 0.351215 | 8.1:-86905555 | MS.gene055381:CDS |
| CAATGTTGCTTTGCGTTTCA+TGG | 0.352365 | 8.1:+86906033 | None:intergenic |
| CGTTCTGTTTCTGATCGATC+TGG | 0.357859 | 8.1:+86908931 | None:intergenic |
| CAGCAGCATTAGCAACAAAA+TGG | 0.360224 | 8.1:-86905802 | MS.gene055381:CDS |
| AAAGTGGAGCATAGGCTCTT+TGG | 0.364203 | 8.1:+86908285 | None:intergenic |
| GCTTCCGAAGCGACAGTGTC+TGG | 0.370101 | 8.1:+86905723 | None:intergenic |
| CTTCTGAAACTTCTTCCGTT+TGG | 0.372515 | 8.1:-86909140 | MS.gene055381:CDS |
| TGTTCCCGGCGGTGATGTTC+CGG | 0.373566 | 8.1:-86908794 | MS.gene055381:CDS |
| AACACGTCGCCGGAAAATTC+CGG | 0.375532 | 8.1:-86909265 | MS.gene055381:CDS |
| CGAGTGGAACATGTTGTAGA+AGG | 0.376814 | 8.1:+86909002 | None:intergenic |
| TGCTTTGCGTTTCATGGTAC+TGG | 0.378095 | 8.1:+86906039 | None:intergenic |
| CAGTTCGGAAACTCGCTTCT+CGG | 0.378944 | 8.1:+86909198 | None:intergenic |
| TTTGTGGTTGTTACGGTGGC+TGG | 0.385764 | 8.1:+86909306 | None:intergenic |
| AACTGCCAATGGTGGCTTTG+AGG | 0.395022 | 8.1:+86908350 | None:intergenic |
| TATTCGGAATTTGGAGGAGA+TGG | 0.397631 | 8.1:+86909093 | None:intergenic |
| TTTGATGCCGGTTCACTTGA+AGG | 0.399037 | 8.1:-86908318 | MS.gene055381:CDS |
| AAATCACCGGAGTTTGTTCC+CGG | 0.402565 | 8.1:-86908808 | MS.gene055381:CDS |
| TTGAGTGACCTTTCGATGAT+TGG | 0.408622 | 8.1:+86905985 | None:intergenic |
| GTCAATGCCTGAAACATTCC+AGG | 0.419912 | 8.1:+86905354 | None:intergenic |
| TCGGCGGTTGAGAACGTTGC+CGG | 0.420345 | 8.1:+86909067 | None:intergenic |
| AGCTGCCATCAATGGTCTTA+GGG | 0.421008 | 8.1:-86907272 | MS.gene055381:CDS |
| CAGCTTGTTGAGCTTTGTCA+TGG | 0.421587 | 8.1:-86907232 | MS.gene055381:CDS |
| AGTTGCCTGTTTGTGTGATT+CGG | 0.424981 | 8.1:+86905959 | None:intergenic |
| AAGAGGTTCGGTGTAGTGAT+TGG | 0.426689 | 8.1:-86908906 | MS.gene055381:CDS |
| GCCCGGTCCTTCAAGTGAAC+CGG | 0.428595 | 8.1:+86908311 | None:intergenic |
| AACTTCTTCCGTTTGGAACT+GGG | 0.429013 | 8.1:-86909133 | MS.gene055381:CDS |
| AGAGTCCCTAAGACCATTGA+TGG | 0.436049 | 8.1:+86907267 | None:intergenic |
| GAAGATAAAGATGAAGCATA+AGG | 0.436587 | 8.1:-86908743 | MS.gene055381:CDS |
| TAACCTTGTTATGGTAGCCT+TGG | 0.439375 | 8.1:+86907339 | None:intergenic |
| AACATCCGAATCACACAAAC+AGG | 0.442893 | 8.1:-86905964 | MS.gene055381:CDS |
| AACATTGTACAGCAAGTTTG+TGG | 0.443164 | 8.1:-86906017 | MS.gene055381:CDS |
| AATCTACAGACAGGTTTGCC+TGG | 0.453101 | 8.1:-86905372 | MS.gene055381:CDS |
| GAAGGTGGAGAGTGCGGAAC+CGG | 0.456738 | 8.1:+86909419 | None:intergenic |
| AAGTGACTGTAACCTTGTTA+TGG | 0.461334 | 8.1:+86907330 | None:intergenic |
| TCCAGAATCCGATACATCTT+CGG | 0.462397 | 8.1:-86909028 | MS.gene055381:CDS |
| CACCATTGGCAGTTAAATAC+CGG | 0.462465 | 8.1:-86908341 | MS.gene055381:CDS |
| TGTTGAACAAACGCTTGAAT+CGG | 0.463003 | 8.1:+86909221 | None:intergenic |
| TTGTTGTTGTCATTGTTGAC+TGG | 0.464323 | 8.1:+86905825 | None:intergenic |
| AATGAGCCGCCGCGAGGTAG+TGG | 0.465032 | 8.1:+86909469 | None:intergenic |
| TGCCGGTTCACTTGAAGGAC+CGG | 0.468386 | 8.1:-86908313 | MS.gene055381:CDS |
| GTTAAATACCGGTTTGATGC+CGG | 0.472409 | 8.1:-86908330 | MS.gene055381:CDS |
| GAAAACTGACACTGCTTACA+AGG | 0.482447 | 8.1:-86905631 | MS.gene055381:CDS |
| ACTTATTATTGTAACATCTC+AGG | 0.483420 | 8.1:-86907311 | MS.gene055381:CDS |
| AGAGGTTCGGTGTAGTGATT+GGG | 0.484652 | 8.1:-86908905 | MS.gene055381:CDS |
| TACAACTCATATTCTATGGT+TGG | 0.486108 | 8.1:-86905561 | MS.gene055381:CDS |
| TTTGAGAAAGCGGCGGTGGC+CGG | 0.491434 | 8.1:-86908685 | MS.gene055381:CDS |
| ACGGTGGCTGGACGAGGAGG+TGG | 0.495073 | 8.1:+86909318 | None:intergenic |
| TGTTCCAGACACTGTCGCTT+CGG | 0.496334 | 8.1:-86905727 | MS.gene055381:CDS |
| ACTACCTCAGCTGCCATCAA+TGG | 0.500376 | 8.1:-86907280 | MS.gene055381:CDS |
| ACCTGAAACAATGGGTTGCA+CGG | 0.501443 | 8.1:-86909571 | None:intergenic |
| GAAGCATTCGAAGGCTATTG+AGG | 0.506274 | 8.1:-86905418 | MS.gene055381:CDS |
| AAACAGAACGTGAAGAGGTT+CGG | 0.508181 | 8.1:-86908918 | MS.gene055381:CDS |
| TCGGAATTTGGAGGAGATGG+AGG | 0.508421 | 8.1:+86909096 | None:intergenic |
| GCACTCTCCACCTTCGCCGC+CGG | 0.510838 | 8.1:-86909411 | MS.gene055381:CDS |
| GTGTGAAGATTGAGCATGAA+AGG | 0.511307 | 8.1:-86907426 | MS.gene055381:CDS |
| AGGTTCACCGGCGGCGAAGG+TGG | 0.514217 | 8.1:+86909404 | None:intergenic |
| AGAATGTGTGGAAGCTTCAC+CGG | 0.514510 | 8.1:+86909246 | None:intergenic |
| TAGTTTCCATCCATCACAAA+AGG | 0.515874 | 8.1:+86905761 | None:intergenic |
| CGGAAATATTCGGAATTTGG+AGG | 0.517284 | 8.1:+86909087 | None:intergenic |
| GGTGGCCGGAGATCGGTTAT+CGG | 0.518645 | 8.1:-86908671 | MS.gene055381:CDS |
| GTTGTTACGGTGGCTGGACG+AGG | 0.518756 | 8.1:+86909312 | None:intergenic |
| GAGAGGTTCACCGGCGGCGA+AGG | 0.519230 | 8.1:+86909401 | None:intergenic |
| GTGGCTGGACGAGGAGGTGG+CGG | 0.521485 | 8.1:+86909321 | None:intergenic |
| GAATTTGGAGGAGATGGAGG+AGG | 0.524100 | 8.1:+86909099 | None:intergenic |
| AGCTTGTTGAGCTTTGTCAT+GGG | 0.524450 | 8.1:-86907231 | MS.gene055381:intron |
| TAGAATCAGCTCTGTCAGCT+TGG | 0.525936 | 8.1:-86905929 | MS.gene055381:CDS |
| CGAGAAGCGAGTTTCCGAAC+TGG | 0.528049 | 8.1:-86909197 | MS.gene055381:CDS |
| TCTATCTCTATCCGATGAGC+TGG | 0.529511 | 8.1:+86908864 | None:intergenic |
| CTTTCGATGATTGGTTCACA+AGG | 0.529959 | 8.1:+86905994 | None:intergenic |
| CAAGTGAACCGGCATCAAAC+CGG | 0.530021 | 8.1:+86908322 | None:intergenic |
| TGAGCAAAGTGAGCTCAACT+TGG | 0.530284 | 8.1:-86908374 | MS.gene055381:CDS |
| AAGCGGCGGTGGCCGGAGAT+CGG | 0.531676 | 8.1:-86908678 | MS.gene055381:CDS |
| GGAAGATATTGGACAAGGCT+TGG | 0.535265 | 8.1:-86905514 | MS.gene055381:CDS |
| CATAGGCTCTTTGGACCGCC+CGG | 0.543103 | 8.1:+86908294 | None:intergenic |
| ACACTTAATAATCTACAGAC+AGG | 0.546583 | 8.1:-86905381 | MS.gene055381:CDS |
| TTGCTTAATTAGGCTAGAGA+AGG | 0.551085 | 8.1:-86907448 | MS.gene055381:intron |
| TCAACCGCCGAATCACAAAC+CGG | 0.551376 | 8.1:-86909055 | MS.gene055381:CDS |
| GCCTATGCTCCACTTTGGAC+CGG | 0.552504 | 8.1:-86908278 | MS.gene055381:CDS |
| GAAGGATTCCGAAGATGTAT+CGG | 0.552928 | 8.1:+86909020 | None:intergenic |
| AAAGAGCCTATGCTCCACTT+TGG | 0.553422 | 8.1:-86908283 | MS.gene055381:CDS |
| TCGGATAGAGATAGAGATGA+AGG | 0.553686 | 8.1:-86908856 | MS.gene055381:CDS |
| TTAGTAGGGCTCAACTTGAT+CGG | 0.558121 | 8.1:-86908636 | MS.gene055381:CDS |
| CTACAGTTTAACCAGCTCAT+CGG | 0.561697 | 8.1:-86908875 | MS.gene055381:CDS |
| GGAGATGTTGCAGATTAGTA+GGG | 0.562230 | 8.1:-86908650 | MS.gene055381:CDS |
| TCACCGCCGGGAACAAACTC+CGG | 0.563935 | 8.1:+86908802 | None:intergenic |
| GCGGTTGGAATGAACCAGTT+CGG | 0.568073 | 8.1:+86909183 | None:intergenic |
| AAAATTCTCCCAGTTCCAAA+CGG | 0.570472 | 8.1:+86909125 | None:intergenic |
| CAAAAGGAAAATGCATCAGA+TGG | 0.571615 | 8.1:+86905777 | None:intergenic |
| TAAACTCGACAACGAAGAAA+CGG | 0.572183 | 8.1:-86909544 | MS.gene055381:CDS |
| AACCGGTATTTAACTGCCAA+TGG | 0.572575 | 8.1:+86908339 | None:intergenic |
| CCGTTCATATGCCATAAAGT+AGG | 0.573938 | 8.1:-86905286 | None:intergenic |
| TTGGACCTCAAAGCCACCAT+TGG | 0.576071 | 8.1:-86908355 | MS.gene055381:CDS |
| GGAGACAGCGAGAGGTTCAC+CGG | 0.577083 | 8.1:+86909392 | None:intergenic |
| CAGTGTCTGGAACACGGTCA+AGG | 0.579288 | 8.1:+86905736 | None:intergenic |
| TGCCAAAAGCCGGTCCAAAG+TGG | 0.581464 | 8.1:+86908269 | None:intergenic |
| CAAACTCTTTCAGGAAGTGA+AGG | 0.582816 | 8.1:-86908238 | MS.gene055381:intron |
| TCTGCAGAGTGAAGAATGCA+AGG | 0.582873 | 8.1:-86907392 | MS.gene055381:CDS |
| TGTAACTCTCTTCGCCTCAC+CGG | 0.588335 | 8.1:-86909438 | MS.gene055381:CDS |
| GCCGGTCCAAAGTGGAGCAT+AGG | 0.588446 | 8.1:+86908277 | None:intergenic |
| GCCGGTTCACTTGAAGGACC+GGG | 0.588752 | 8.1:-86908312 | MS.gene055381:CDS |
| ATCAGAAACAGAACGTGAAG+AGG | 0.588905 | 8.1:-86908923 | MS.gene055381:CDS |
| AGAGCGCCGCCGTCTCATGA+AGG | 0.589240 | 8.1:-86909508 | MS.gene055381:CDS |
| TCTCACCGGAACATCACCGC+CGG | 0.589608 | 8.1:+86908789 | None:intergenic |
| CATCTCCGATAACCGATCTC+CGG | 0.591527 | 8.1:+86908666 | None:intergenic |
| CAGTTTCTGAAACACGTCGC+CGG | 0.594202 | 8.1:-86909275 | MS.gene055381:CDS |
| GGTTCGGTGTAGTGATTGGG+AGG | 0.594422 | 8.1:-86908902 | MS.gene055381:CDS |
| AGTGTCTGGAACACGGTCAA+GGG | 0.596369 | 8.1:+86905737 | None:intergenic |
| GATAGAGATGAAGGTATCGC+CGG | 0.602032 | 8.1:-86908847 | MS.gene055381:CDS |
| CTCACCGGAACATCACCGCC+GGG | 0.604307 | 8.1:+86908790 | None:intergenic |
| AAGACCATTGATGGCAGCTG+AGG | 0.609697 | 8.1:+86907276 | None:intergenic |
| GGCGGCGAAGGTGGAGAGTG+CGG | 0.611743 | 8.1:+86909413 | None:intergenic |
| GTTACGGTGGCTGGACGAGG+AGG | 0.611751 | 8.1:+86909315 | None:intergenic |
| CGGTATTTAACTGCCAATGG+TGG | 0.612149 | 8.1:+86908342 | None:intergenic |
| TATCGCCGGTTTGAAGTCAT+CGG | 0.615192 | 8.1:-86908833 | MS.gene055381:CDS |
| GACGTGTTTCAGAAACTGTA+CGG | 0.616647 | 8.1:+86909280 | None:intergenic |
| ACTGTGTTGATGAAAACGGC+GGG | 0.618606 | 8.1:+86909360 | None:intergenic |
| GAAAACGGCGGGAATGTCGT+CGG | 0.622356 | 8.1:+86909371 | None:intergenic |
| TGGAATAATTCCAAACTCTG+TGG | 0.623866 | 8.1:-86905535 | MS.gene055381:CDS |
| AACATAGAATCATTCACATG+TGG | 0.629855 | 8.1:-86906073 | MS.gene055381:intron |
| TGAAAAGTTGAAGCATTCGA+AGG | 0.634173 | 8.1:-86905427 | MS.gene055381:CDS |
| CTTGAATCGGAGAGAATGTG+TGG | 0.636876 | 8.1:+86909234 | None:intergenic |
| CAGAGTGAAGAATGCAAGGG+AGG | 0.640119 | 8.1:-86907388 | MS.gene055381:CDS |
| CCTACTTTATGGCATATGAA+CGG | 0.642947 | 8.1:+86905286 | None:intergenic |
| TGACAAAGCTCAACAAGCTG+AGG | 0.646039 | 8.1:+86907235 | None:intergenic |
| TGGAGAGTGCGGAACCGGTG+AGG | 0.647266 | 8.1:+86909424 | None:intergenic |
| AAACCAAGGCTACCATAACA+AGG | 0.647826 | 8.1:-86907342 | MS.gene055381:CDS |
| CTTGTGAACCAATCATCGAA+AGG | 0.650319 | 8.1:-86905993 | MS.gene055381:CDS |
| AAGCGACAGTGTCTGGAACA+CGG | 0.656033 | 8.1:+86905730 | None:intergenic |
| ATTGCTTAACTGATATTACG+TGG | 0.657821 | 8.1:+86905676 | None:intergenic |
| ATGTCGTCGGAGACAGCGAG+AGG | 0.661397 | 8.1:+86909384 | None:intergenic |
| TACTGTGTTGATGAAAACGG+CGG | 0.666428 | 8.1:+86909359 | None:intergenic |
| CTGCAGAGTGAAGAATGCAA+GGG | 0.667767 | 8.1:-86907391 | MS.gene055381:CDS |
| AACAAAGATAGACAAAACCA+AGG | 0.673276 | 8.1:-86907356 | MS.gene055381:CDS |
| ACAACGAAGAAACGGTGCGG+CGG | 0.676785 | 8.1:-86909536 | MS.gene055381:CDS |
| TCCGGTGAGAAAAGACGAGG+AGG | 0.685176 | 8.1:-86908776 | MS.gene055381:CDS |
| TCTGTGGAAGATATTGGACA+AGG | 0.692232 | 8.1:-86905519 | MS.gene055381:CDS |
| AAACTGCTTCCTTCATGAGA+CGG | 0.693412 | 8.1:+86909499 | None:intergenic |
| AATCAGAATGAGCCGCCGCG+AGG | 0.698899 | 8.1:+86909463 | None:intergenic |
| CGCTCGCCACTACCTCGCGG+CGG | 0.703888 | 8.1:-86909475 | MS.gene055381:CDS |
| CTGCTTCCTTCATGAGACGG+CGG | 0.713162 | 8.1:+86909502 | None:intergenic |
| TGTTCCGGTGAGAAAAGACG+AGG | 0.729152 | 8.1:-86908779 | MS.gene055381:CDS |
| GACAGCGAGAGGTTCACCGG+CGG | 0.729279 | 8.1:+86909395 | None:intergenic |
| TCACCGGAGTTTGTTCCCGG+CGG | 0.731368 | 8.1:-86908805 | MS.gene055381:CDS |
| TTACGCTCGCCACTACCTCG+CGG | 0.753107 | 8.1:-86909478 | MS.gene055381:CDS |
| TCGACAACGAAGAAACGGTG+CGG | 0.756888 | 8.1:-86909539 | MS.gene055381:CDS |
| GGTTCACTTGAAGGACCGGG+CGG | 0.787079 | 8.1:-86908309 | MS.gene055381:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATACTTAATTGAAAAA+TGG | - | chr8.1:86906404-86906423 | MS.gene055381:intron | 10.0% |
| !! | TTAATCATATATTTAAATTG+GGG | - | chr8.1:86907746-86907765 | MS.gene055381:intron | 10.0% |
| !! | AAATAGTATTTGAGAAAATA+TGG | - | chr8.1:86907939-86907958 | MS.gene055381:intron | 15.0% |
| !! | AGATTTATATCTGAAAAAAT+TGG | - | chr8.1:86906351-86906370 | MS.gene055381:intron | 15.0% |
| !! | ATATTGAAATTTGAATTGTA+AGG | + | chr8.1:86908561-86908580 | None:intergenic | 15.0% |
| !! | ATGAAATTGGAAAATTATAA+TGG | - | chr8.1:86908483-86908502 | MS.gene055381:intron | 15.0% |
| !! | TAATCATATATTTAAATTGG+GGG | - | chr8.1:86907747-86907766 | MS.gene055381:intron | 15.0% |
| !! | TATTGAAATTTGAATTGTAA+GGG | + | chr8.1:86908560-86908579 | None:intergenic | 15.0% |
| !!! | CAAATACTATTTCAAAATTT+TGG | + | chr8.1:86907931-86907950 | None:intergenic | 15.0% |
| !!! | TACAATAAATTTTAATGTTG+AGG | - | chr8.1:86906837-86906856 | MS.gene055381:intron | 15.0% |
| !!! | TATAAACTTGATAATCATAA+AGG | - | chr8.1:86908578-86908597 | MS.gene055381:intron | 15.0% |
| !! | TATATAGTACTAATAGTTGA+TGG | - | chr8.1:86906749-86906768 | MS.gene055381:intron | 20.0% |
| !! | TCTCAATACTAGTATATATA+TGG | + | chr8.1:86908616-86908635 | None:intergenic | 20.0% |
| !!! | ATACTATTTCAAAATTTTGG+TGG | + | chr8.1:86907928-86907947 | None:intergenic | 20.0% |
| !!! | ATTTAGAGTTAATTTGTGAA+GGG | + | chr8.1:86907330-86907349 | None:intergenic | 20.0% |
| !!! | ATTTTCTAGTAAAATGAGAT+TGG | - | chr8.1:86907812-86907831 | MS.gene055381:intron | 20.0% |
| !!! | TAAAAAGGAAATGACTTTTT+TGG | + | chr8.1:86907270-86907289 | None:intergenic | 20.0% |
| !!! | TAGTTTAGGTTGAATTAAAA+AGG | + | chr8.1:86907285-86907304 | None:intergenic | 20.0% |
| !!! | TATTTAGAGTTAATTTGTGA+AGG | + | chr8.1:86907331-86907350 | None:intergenic | 20.0% |
| !!! | TGATTCAATTTTGAGTTATA+AGG | - | chr8.1:86907073-86907092 | MS.gene055381:intron | 20.0% |
| !!! | TTTTGCTTAATTGCTTAATT+AGG | - | chr8.1:86907390-86907409 | MS.gene055381:CDS | 20.0% |
| ! | AACTTGATTCTACTGTATTA+TGG | + | chr8.1:86908081-86908100 | None:intergenic | 25.0% |
| ! | ACTTATTATTGTAACATCTC+AGG | - | chr8.1:86907537-86907556 | MS.gene055381:intron | 25.0% |
| ! | AGTGAACAAAAAATAACTTC+AGG | + | chr8.1:86908189-86908208 | None:intergenic | 25.0% |
| ! | ATATCTATTCGTACTTTCAT+TGG | - | chr8.1:86907901-86907920 | MS.gene055381:intron | 25.0% |
| ! | ATTTGAGAGTTAATTCTCAA+TGG | - | chr8.1:86908034-86908053 | MS.gene055381:intron | 25.0% |
| ! | GGAAACAAAATTATACAGAA+TGG | + | chr8.1:86908438-86908457 | None:intergenic | 25.0% |
| ! | GTAACTGTCAACAAATAAAA+TGG | + | chr8.1:86908337-86908356 | None:intergenic | 25.0% |
| ! | TATCTATTCGTACTTTCATT+GGG | - | chr8.1:86907902-86907921 | MS.gene055381:intron | 25.0% |
| ! | TCAGAATCACAAAAATGAAA+CGG | - | chr8.1:86905886-86905905 | MS.gene055381:CDS | 25.0% |
| !!! | AATAAAATGGTTTGCTCAAA+TGG | + | chr8.1:86908324-86908343 | None:intergenic | 25.0% |
| !!! | ATAAAATGGTTTGCTCAAAT+GGG | + | chr8.1:86908323-86908342 | None:intergenic | 25.0% |
| !!! | CTCTTTGAAATTTTATGATC+CGG | + | chr8.1:86908959-86908978 | None:intergenic | 25.0% |
| !!! | GAAGTTATTTTTTGTTCACT+AGG | - | chr8.1:86908189-86908208 | MS.gene055381:intron | 25.0% |
| !!! | GTATAATTTTGTTTCCCTTA+AGG | - | chr8.1:86908442-86908461 | MS.gene055381:intron | 25.0% |
| !!! | TTGCAAGTTGATATTAGTTT+AGG | + | chr8.1:86907299-86907318 | None:intergenic | 25.0% |
| !!! | TTTTACTGTGTTGATGAAAA+CGG | + | chr8.1:86905495-86905514 | None:intergenic | 25.0% |
| AACAAAGATAGACAAAACCA+AGG | - | chr8.1:86907492-86907511 | MS.gene055381:intron | 30.0% | |
| AACAATGTAAAGCTCTTGTA+CGG | - | chr8.1:86906705-86906724 | MS.gene055381:intron | 30.0% | |
| AACATAGAATCATTCACATG+TGG | - | chr8.1:86908775-86908794 | MS.gene055381:CDS | 30.0% | |
| ACACTTAATAATCTACAGAC+AGG | - | chr8.1:86909467-86909486 | MS.gene055381:CDS | 30.0% | |
| ACTTATATCTAAGTTCAGAG+AGG | + | chr8.1:86907669-86907688 | None:intergenic | 30.0% | |
| ATGTCTCTCTATTCTACTAT+TGG | - | chr8.1:86907641-86907660 | MS.gene055381:intron | 30.0% | |
| ATTGCTTAACTGATATTACG+TGG | + | chr8.1:86909175-86909194 | None:intergenic | 30.0% | |
| CAATTTCATATACTATTGCC+AGG | + | chr8.1:86908472-86908491 | None:intergenic | 30.0% | |
| CACACATAACATCCTAATTT+AGG | + | chr8.1:86907358-86907377 | None:intergenic | 30.0% | |
| CATGTGAATGATTCTATGTT+TGG | + | chr8.1:86908775-86908794 | None:intergenic | 30.0% | |
| CTGGCAATAGTATATGAAAT+TGG | - | chr8.1:86908470-86908489 | MS.gene055381:intron | 30.0% | |
| CTTATATCTAAGTTCAGAGA+GGG | + | chr8.1:86907668-86907687 | None:intergenic | 30.0% | |
| GAACATAGTAGCATATTTCT+TGG | - | chr8.1:86908505-86908524 | MS.gene055381:intron | 30.0% | |
| GAAGATAAAGATGAAGCATA+AGG | - | chr8.1:86906105-86906124 | MS.gene055381:intron | 30.0% | |
| GTATTTGCACAATGTATGAA+AGG | - | chr8.1:86907772-86907791 | MS.gene055381:intron | 30.0% | |
| GTCAAGAACTCAAGATTAAA+AGG | - | chr8.1:86909195-86909214 | MS.gene055381:CDS | 30.0% | |
| GTGTGTTTGATATTCAATCA+AGG | - | chr8.1:86907868-86907887 | MS.gene055381:intron | 30.0% | |
| TACAACTCATATTCTATGGT+TGG | - | chr8.1:86909287-86909306 | MS.gene055381:CDS | 30.0% | |
| TATCTTATTCACATATGAGC+TGG | - | chr8.1:86907702-86907721 | MS.gene055381:intron | 30.0% | |
| TCTAAATACTCGCCTAAATT+AGG | - | chr8.1:86907343-86907362 | MS.gene055381:CDS | 30.0% | |
| TTGATGCACAACAATAATGT+AGG | + | chr8.1:86908687-86908706 | None:intergenic | 30.0% | |
| ! | AATACAGTAGAATCAAGTTG+TGG | - | chr8.1:86908082-86908101 | MS.gene055381:intron | 30.0% |
| ! | ATTTCTTGGTAAAGCATCTT+TGG | - | chr8.1:86908519-86908538 | MS.gene055381:intron | 30.0% |
| ! | TCATATTCTATGGTTGGTAT+TGG | - | chr8.1:86909293-86909312 | MS.gene055381:CDS | 30.0% |
| ! | TGGACATCATAATTTTGTTC+AGG | - | chr8.1:86906969-86906988 | MS.gene055381:intron | 30.0% |
| !! | AAGAGAGAATTTTGAGAAAG+CGG | - | chr8.1:86906153-86906172 | MS.gene055381:intron | 30.0% |
| !! | TAAAATGGTTTGCTCAAATG+GGG | + | chr8.1:86908322-86908341 | None:intergenic | 30.0% |
| !! | TTATTTTGTCACTACATGGT+TGG | - | chr8.1:86908982-86909001 | MS.gene055381:CDS | 30.0% |
| !!! | GACTTTATTTTGTCACTACA+TGG | - | chr8.1:86908978-86908997 | MS.gene055381:CDS | 30.0% |
| !!! | TATTTTTTGTTCACTAGGTG+TGG | - | chr8.1:86908194-86908213 | MS.gene055381:intron | 30.0% |
| AAAATTCTCCCAGTTCCAAA+CGG | + | chr8.1:86905726-86905745 | None:intergenic | 35.0% | |
| AACACTAAAACACCTAAAGC+AGG | + | chr8.1:86906882-86906901 | None:intergenic | 35.0% | |
| AACATTGTACAGCAAGTTTG+TGG | - | chr8.1:86908831-86908850 | MS.gene055381:CDS | 35.0% | |
| AAGTGACTGTAACCTTGTTA+TGG | + | chr8.1:86907521-86907540 | None:intergenic | 35.0% | |
| ACAATGTAAAGCTCTTGTAC+GGG | - | chr8.1:86906706-86906725 | MS.gene055381:intron | 35.0% | |
| ACTTTCAAATACACCAAACG+TGG | - | chr8.1:86907138-86907157 | MS.gene055381:intron | 35.0% | |
| ATGGGAAAACAAACTCTTTC+AGG | - | chr8.1:86906601-86906620 | MS.gene055381:intron | 35.0% | |
| CAAAAGGAAAATGCATCAGA+TGG | + | chr8.1:86909074-86909093 | None:intergenic | 35.0% | |
| CAGTGAGTTAAGCAAAATCA+CGG | + | chr8.1:86907032-86907051 | None:intergenic | 35.0% | |
| CTACTGTATTATGGCAATAC+AGG | + | chr8.1:86908072-86908091 | None:intergenic | 35.0% | |
| CTCCAAATTCCGAATATTTC+CGG | - | chr8.1:86905762-86905781 | MS.gene055381:CDS | 35.0% | |
| CTTATGATGTTTCCTGCTTT+AGG | - | chr8.1:86906867-86906886 | MS.gene055381:intron | 35.0% | |
| GTGAGTTCAACAAAATCACT+TGG | - | chr8.1:86906949-86906968 | MS.gene055381:intron | 35.0% | |
| TAAACTCGACAACGAAGAAA+CGG | - | chr8.1:86905304-86905323 | MS.gene055381:CDS | 35.0% | |
| TAGTTTCCATCCATCACAAA+AGG | + | chr8.1:86909090-86909109 | None:intergenic | 35.0% | |
| TCAACAAAGTCAGGAACTTT+AGG | - | chr8.1:86907843-86907862 | MS.gene055381:intron | 35.0% | |
| TGGAATAATTCCAAACTCTG+TGG | - | chr8.1:86909313-86909332 | MS.gene055381:CDS | 35.0% | |
| TGTTGAACAAACGCTTGAAT+CGG | + | chr8.1:86905630-86905649 | None:intergenic | 35.0% | |
| TTACTCTTGCACACATAGTT+AGG | + | chr8.1:86908135-86908154 | None:intergenic | 35.0% | |
| TTGCTTAATTAGGCTAGAGA+AGG | - | chr8.1:86907400-86907419 | MS.gene055381:CDS | 35.0% | |
| ! | GATGCATTTTCCTTTTGTGA+TGG | - | chr8.1:86909077-86909096 | MS.gene055381:CDS | 35.0% |
| ! | TGAAAAGTTGAAGCATTCGA+AGG | - | chr8.1:86909421-86909440 | MS.gene055381:CDS | 35.0% |
| ! | TTCCTGACTTTGTTGACTAA+TGG | + | chr8.1:86907839-86907858 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTCATTGTTGAC+TGG | + | chr8.1:86909026-86909045 | None:intergenic | 35.0% |
| ! | TTTTGCTTACTGAGAAAGTG+CGG | - | chr8.1:86906278-86906297 | MS.gene055381:intron | 35.0% |
| ! | TTTTTCCGATGACTTCAAAC+CGG | + | chr8.1:86906023-86906042 | None:intergenic | 35.0% |
| !! | AAGGAATGAATTGAGTTGAG+TGG | - | chr8.1:86907092-86907111 | MS.gene055381:intron | 35.0% |
| !! | AATGAATTGAGTTGAGTGGA+TGG | - | chr8.1:86907096-86907115 | MS.gene055381:intron | 35.0% |
| !! | CATTTTCCTTTTGTGATGGA+TGG | - | chr8.1:86909081-86909100 | MS.gene055381:CDS | 35.0% |
| !! | CTTGGCATTCAAGTTTTATC+CGG | - | chr8.1:86908937-86908956 | MS.gene055381:CDS | 35.0% |
| !! | TCTGAAGATGAATTTTCGAG+TGG | + | chr8.1:86905865-86905884 | None:intergenic | 35.0% |
| !!! | CCAATTTTTTCTCAGCAAGA+GGG | + | chr8.1:86909370-86909389 | None:intergenic | 35.0% |
| !!! | TCCAATTTTTTCTCAGCAAG+AGG | + | chr8.1:86909371-86909390 | None:intergenic | 35.0% |
| !!! | TGTTGATTCATTTTGATGCG+CGG | + | chr8.1:86905687-86905706 | None:intergenic | 35.0% |
| AAACAGAACGTGAAGAGGTT+CGG | - | chr8.1:86905930-86905949 | MS.gene055381:CDS | 40.0% | |
| AAACCAAGGCTACCATAACA+AGG | - | chr8.1:86907506-86907525 | MS.gene055381:intron | 40.0% | |
| AAACTGCTTCCTTCATGAGA+CGG | + | chr8.1:86905352-86905371 | None:intergenic | 40.0% | |
| AACATCCGAATCACACAAAC+AGG | - | chr8.1:86908884-86908903 | MS.gene055381:CDS | 40.0% | |
| AACCGGTATTTAACTGCCAA+TGG | + | chr8.1:86906512-86906531 | None:intergenic | 40.0% | |
| AGAACGTTGCCGGAAATATT+CGG | + | chr8.1:86905774-86905793 | None:intergenic | 40.0% | |
| AGTTGCCTGTTTGTGTGATT+CGG | + | chr8.1:86908892-86908911 | None:intergenic | 40.0% | |
| ATCAGAAACAGAACGTGAAG+AGG | - | chr8.1:86905925-86905944 | MS.gene055381:CDS | 40.0% | |
| CAAACTCTTTCAGGAAGTGA+AGG | - | chr8.1:86906610-86906629 | MS.gene055381:intron | 40.0% | |
| CACCATTGGCAGTTAAATAC+CGG | - | chr8.1:86906507-86906526 | MS.gene055381:intron | 40.0% | |
| CAGCAGCATTAGCAACAAAA+TGG | - | chr8.1:86909046-86909065 | MS.gene055381:CDS | 40.0% | |
| CATGCTAATCAAACCACGTT+TGG | + | chr8.1:86907154-86907173 | None:intergenic | 40.0% | |
| CCAAACTCTGTGGAAGATAT+TGG | - | chr8.1:86909323-86909342 | MS.gene055381:CDS | 40.0% | |
| CCAATATCTTCCACAGAGTT+TGG | + | chr8.1:86909326-86909345 | None:intergenic | 40.0% | |
| CCCTCTTGCTGAGAAAAAAT+TGG | - | chr8.1:86909367-86909386 | MS.gene055381:CDS | 40.0% | |
| CGGAAATATTCGGAATTTGG+AGG | + | chr8.1:86905764-86905783 | None:intergenic | 40.0% | |
| CGTGGTTTGATTAGCATGTT+TGG | - | chr8.1:86907156-86907175 | MS.gene055381:intron | 40.0% | |
| CTACAGTTTAACCAGCTCAT+CGG | - | chr8.1:86905973-86905992 | MS.gene055381:CDS | 40.0% | |
| CTTAACTCACTGCGAAACAA+GGG | - | chr8.1:86907040-86907059 | MS.gene055381:intron | 40.0% | |
| CTTGTGAACCAATCATCGAA+AGG | - | chr8.1:86908855-86908874 | MS.gene055381:CDS | 40.0% | |
| GAAAACTGACACTGCTTACA+AGG | - | chr8.1:86909217-86909236 | MS.gene055381:CDS | 40.0% | |
| GAAGGATTCCGAAGATGTAT+CGG | + | chr8.1:86905831-86905850 | None:intergenic | 40.0% | |
| GAAGTCATCGGAAAAATCAC+CGG | - | chr8.1:86906027-86906046 | MS.gene055381:CDS | 40.0% | |
| GACCATTAGTCAACAAAGTC+AGG | - | chr8.1:86907834-86907853 | MS.gene055381:intron | 40.0% | |
| GACGTGTTTCAGAAACTGTA+CGG | + | chr8.1:86905571-86905590 | None:intergenic | 40.0% | |
| GAGTTGAGTGGATGGATAAT+AGG | - | chr8.1:86907104-86907123 | MS.gene055381:intron | 40.0% | |
| GGAGATGTTGCAGATTAGTA+GGG | - | chr8.1:86906198-86906217 | MS.gene055381:intron | 40.0% | |
| GTGTGAAGATTGAGCATGAA+AGG | - | chr8.1:86907422-86907441 | MS.gene055381:CDS | 40.0% | |
| TATTCGGAATTTGGAGGAGA+TGG | + | chr8.1:86905758-86905777 | None:intergenic | 40.0% | |
| TCCAGAATCCGATACATCTT+CGG | - | chr8.1:86905820-86905839 | MS.gene055381:CDS | 40.0% | |
| TCGGATAGAGATAGAGATGA+AGG | - | chr8.1:86905992-86906011 | MS.gene055381:CDS | 40.0% | |
| TCTGTGGAAGATATTGGACA+AGG | - | chr8.1:86909329-86909348 | MS.gene055381:CDS | 40.0% | |
| TGCCGGAAATATTCGGAATT+TGG | + | chr8.1:86905767-86905786 | None:intergenic | 40.0% | |
| TTAGTAGGGCTCAACTTGAT+CGG | - | chr8.1:86906212-86906231 | MS.gene055381:intron | 40.0% | |
| TTGAGTGACCTTTCGATGAT+TGG | + | chr8.1:86908866-86908885 | None:intergenic | 40.0% | |
| ! | AAACTTCTTCCGTTTGGAAC+TGG | - | chr8.1:86905714-86905733 | MS.gene055381:CDS | 40.0% |
| ! | AACTTCTTCCGTTTGGAACT+GGG | - | chr8.1:86905715-86905734 | MS.gene055381:CDS | 40.0% |
| ! | AGAAACTGTACGGAGTTTTG+TGG | + | chr8.1:86905561-86905580 | None:intergenic | 40.0% |
| ! | CTTTCGATGATTGGTTCACA+AGG | + | chr8.1:86908857-86908876 | None:intergenic | 40.0% |
| ! | GTATCGGATTCTGGATTTTC+CGG | + | chr8.1:86905815-86905834 | None:intergenic | 40.0% |
| ! | TAACCTTGTTATGGTAGCCT+TGG | + | chr8.1:86907512-86907531 | None:intergenic | 40.0% |
| ! | TACTGTGTTGATGAAAACGG+CGG | + | chr8.1:86905492-86905511 | None:intergenic | 40.0% |
| ! | TATTGCCAGGTTGACCTTAA+GGG | + | chr8.1:86908459-86908478 | None:intergenic | 40.0% |
| ! | TTTGCTTACTGAGAAAGTGC+GGG | - | chr8.1:86906279-86906298 | MS.gene055381:intron | 40.0% |
| !! | ACGGAGTTTTGTGGTTGTTA+CGG | + | chr8.1:86905552-86905571 | None:intergenic | 40.0% |
| !! | AGAGAATTTTGAGAAAGCGG+CGG | - | chr8.1:86906156-86906175 | MS.gene055381:intron | 40.0% |
| !! | AGCTTGTTGAGCTTTGTCAT+GGG | - | chr8.1:86907617-86907636 | MS.gene055381:intron | 40.0% |
| !! | CAATGTTGCTTTGCGTTTCA+TGG | + | chr8.1:86908818-86908837 | None:intergenic | 40.0% |
| !! | CTTCTGAAACTTCTTCCGTT+TGG | - | chr8.1:86905708-86905727 | MS.gene055381:CDS | 40.0% |
| !! | GGATTTTCCGGTTTGTGATT+CGG | + | chr8.1:86905803-86905822 | None:intergenic | 40.0% |
| !! | GTTAAATACCGGTTTGATGC+CGG | - | chr8.1:86906518-86906537 | MS.gene055381:intron | 40.0% |
| AAAGAGCCTATGCTCCACTT+TGG | - | chr8.1:86906565-86906584 | MS.gene055381:intron | 45.0% | |
| AAAGTGGAGCATAGGCTCTT+TGG | + | chr8.1:86906566-86906585 | None:intergenic | 45.0% | |
| AATCTACAGACAGGTTTGCC+TGG | - | chr8.1:86909476-86909495 | MS.gene055381:CDS | 45.0% | |
| AGAATGTGTGGAAGCTTCAC+CGG | + | chr8.1:86905605-86905624 | None:intergenic | 45.0% | |
| AGAGTCCCTAAGACCATTGA+TGG | + | chr8.1:86907584-86907603 | None:intergenic | 45.0% | |
| AGGTTTGCCTGGAATGTTTC+AGG | - | chr8.1:86909487-86909506 | MS.gene055381:CDS | 45.0% | |
| ATTAACTGTCGTTGCTGCAC+AGG | + | chr8.1:86908640-86908659 | None:intergenic | 45.0% | |
| CACTAGGTGTGGTGTATGAA+TGG | - | chr8.1:86908205-86908224 | MS.gene055381:intron | 45.0% | |
| CAGCGAGTTCTGCGAAATTA+CGG | - | chr8.1:86908233-86908252 | MS.gene055381:intron | 45.0% | |
| CGAGTGGAACATGTTGTAGA+AGG | + | chr8.1:86905849-86905868 | None:intergenic | 45.0% | |
| CGGAGATGTTGCAGATTAGT+AGG | - | chr8.1:86906197-86906216 | MS.gene055381:intron | 45.0% | |
| CGGTATTTAACTGCCAATGG+TGG | + | chr8.1:86906509-86906528 | None:intergenic | 45.0% | |
| CTGCAGAGTGAAGAATGCAA+GGG | - | chr8.1:86907457-86907476 | MS.gene055381:intron | 45.0% | |
| CTTGAATCGGAGAGAATGTG+TGG | + | chr8.1:86905617-86905636 | None:intergenic | 45.0% | |
| GAGCAACACTGAGTCTGAAT+TGG | + | chr8.1:86907974-86907993 | None:intergenic | 45.0% | |
| GCTTAACTCACTGCGAAACA+AGG | - | chr8.1:86907039-86907058 | MS.gene055381:intron | 45.0% | |
| GGAAGATATTGGACAAGGCT+TGG | - | chr8.1:86909334-86909353 | MS.gene055381:CDS | 45.0% | |
| GTCAATGCCTGAAACATTCC+AGG | + | chr8.1:86909497-86909516 | None:intergenic | 45.0% | |
| TAGAATCAGCTCTGTCAGCT+TGG | - | chr8.1:86908919-86908938 | MS.gene055381:CDS | 45.0% | |
| TCCGAAGATGTATCGGATTC+TGG | + | chr8.1:86905824-86905843 | None:intergenic | 45.0% | |
| TCTATCTCTATCCGATGAGC+TGG | + | chr8.1:86905987-86906006 | None:intergenic | 45.0% | |
| TCTGCAGAGTGAAGAATGCA+AGG | - | chr8.1:86907456-86907475 | MS.gene055381:intron | 45.0% | |
| TCTTGTACGGGTAGTGTAGT+GGG | - | chr8.1:86906718-86906737 | MS.gene055381:intron | 45.0% | |
| TGACAAAGCTCAACAAGCTG+AGG | + | chr8.1:86907616-86907635 | None:intergenic | 45.0% | |
| TGAGCAAAGTGAGCTCAACT+TGG | - | chr8.1:86906474-86906493 | MS.gene055381:intron | 45.0% | |
| TGCTTTGCGTTTCATGGTAC+TGG | + | chr8.1:86908812-86908831 | None:intergenic | 45.0% | |
| TGTGCAGCAACGACAGTTAA+TGG | - | chr8.1:86908639-86908658 | MS.gene055381:CDS | 45.0% | |
| TGTTTCCCTTAAGGTCAACC+TGG | - | chr8.1:86908451-86908470 | MS.gene055381:intron | 45.0% | |
| ! | AAATCACCGGAGTTTGTTCC+CGG | - | chr8.1:86906040-86906059 | MS.gene055381:CDS | 45.0% |
| ! | ACTGTGTTGATGAAAACGGC+GGG | + | chr8.1:86905491-86905510 | None:intergenic | 45.0% |
| ! | AGCTGCCATCAATGGTCTTA+GGG | - | chr8.1:86907576-86907595 | MS.gene055381:intron | 45.0% |
| ! | CTATTGCCAGGTTGACCTTA+AGG | + | chr8.1:86908460-86908479 | None:intergenic | 45.0% |
| ! | GAAGCATTCGAAGGCTATTG+AGG | - | chr8.1:86909430-86909449 | MS.gene055381:CDS | 45.0% |
| ! | GAAGCTTCACCGGAATTTTC+CGG | + | chr8.1:86905595-86905614 | None:intergenic | 45.0% |
| ! | TGTTTTCCCATGCCAAAAGC+CGG | + | chr8.1:86906592-86906611 | None:intergenic | 45.0% |
| !! | AAGAGGTTCGGTGTAGTGAT+TGG | - | chr8.1:86905942-86905961 | MS.gene055381:CDS | 45.0% |
| !! | AGAGGTTCGGTGTAGTGATT+GGG | - | chr8.1:86905943-86905962 | MS.gene055381:CDS | 45.0% |
| !! | CAGCTTGTTGAGCTTTGTCA+TGG | - | chr8.1:86907616-86907635 | MS.gene055381:intron | 45.0% |
| !! | CGTTCTGTTTCTGATCGATC+TGG | + | chr8.1:86905920-86905939 | None:intergenic | 45.0% |
| !! | GAGTTTTGTGGTTGTTACGG+TGG | + | chr8.1:86905549-86905568 | None:intergenic | 45.0% |
| !! | GATAGAGATGAAGGTATCGC+CGG | - | chr8.1:86906001-86906020 | MS.gene055381:CDS | 45.0% |
| !! | GATTCATTTTGATGCGCGGT+TGG | + | chr8.1:86905683-86905702 | None:intergenic | 45.0% |
| !! | TATCGCCGGTTTGAAGTCAT+CGG | - | chr8.1:86906015-86906034 | MS.gene055381:CDS | 45.0% |
| !! | TTTGATGCCGGTTCACTTGA+AGG | - | chr8.1:86906530-86906549 | MS.gene055381:intron | 45.0% |
| !! | TTTTCCGGTTTGTGATTCGG+CGG | + | chr8.1:86905800-86905819 | None:intergenic | 45.0% |
| !! | TTTAATCATATATTTAAATT+GGG | - | chr8.1:86907745-86907764 | MS.gene055381:intron | 5.0% |
| !!! | TTTTAATCATATATTTAAAT+TGG | - | chr8.1:86907744-86907763 | MS.gene055381:intron | 5.0% |
| AACACGTCGCCGGAAAATTC+CGG | - | chr8.1:86905583-86905602 | MS.gene055381:CDS | 50.0% | |
| ACTACCTCAGCTGCCATCAA+TGG | - | chr8.1:86907568-86907587 | MS.gene055381:intron | 50.0% | |
| CAAGTGAACCGGCATCAAAC+CGG | + | chr8.1:86906529-86906548 | None:intergenic | 50.0% | |
| CAGAGTGAAGAATGCAAGGG+AGG | - | chr8.1:86907460-86907479 | MS.gene055381:intron | 50.0% | |
| CAGCTGCCATCAATGGTCTT+AGG | - | chr8.1:86907575-86907594 | MS.gene055381:intron | 50.0% | |
| CAGTTCGGAAACTCGCTTCT+CGG | + | chr8.1:86905653-86905672 | None:intergenic | 50.0% | |
| CATCTCCGATAACCGATCTC+CGG | + | chr8.1:86906185-86906204 | None:intergenic | 50.0% | |
| CTCTTGTACGGGTAGTGTAG+TGG | - | chr8.1:86906717-86906736 | MS.gene055381:intron | 50.0% | |
| GAATTTGGAGGAGATGGAGG+AGG | + | chr8.1:86905752-86905771 | None:intergenic | 50.0% | |
| GCGGTTGGAATGAACCAGTT+CGG | + | chr8.1:86905668-86905687 | None:intergenic | 50.0% | |
| TCAACCGCCGAATCACAAAC+CGG | - | chr8.1:86905793-86905812 | MS.gene055381:CDS | 50.0% | |
| TCGACAACGAAGAAACGGTG+CGG | - | chr8.1:86905309-86905328 | MS.gene055381:CDS | 50.0% | |
| TCGGAATTTGGAGGAGATGG+AGG | + | chr8.1:86905755-86905774 | None:intergenic | 50.0% | |
| TGTAACTCTCTTCGCCTCAC+CGG | - | chr8.1:86905410-86905429 | MS.gene055381:CDS | 50.0% | |
| TGTTCCGGTGAGAAAAGACG+AGG | - | chr8.1:86906069-86906088 | MS.gene055381:CDS | 50.0% | |
| TTGGACCTCAAAGCCACCAT+TGG | - | chr8.1:86906493-86906512 | MS.gene055381:intron | 50.0% | |
| TTTGTGGTTGTTACGGTGGC+TGG | + | chr8.1:86905545-86905564 | None:intergenic | 50.0% | |
| ! | AACTGCCAATGGTGGCTTTG+AGG | + | chr8.1:86906501-86906520 | None:intergenic | 50.0% |
| ! | AAGACCATTGATGGCAGCTG+AGG | + | chr8.1:86907575-86907594 | None:intergenic | 50.0% |
| ! | AAGCGACAGTGTCTGGAACA+CGG | + | chr8.1:86909121-86909140 | None:intergenic | 50.0% |
| ! | ACCTCCTCGTCTTTTCTCAC+CGG | + | chr8.1:86906076-86906095 | None:intergenic | 50.0% |
| ! | AGTGTCTGGAACACGGTCAA+GGG | + | chr8.1:86909114-86909133 | None:intergenic | 50.0% |
| ! | TGTTCCAGACACTGTCGCTT+CGG | - | chr8.1:86909121-86909140 | MS.gene055381:CDS | 50.0% |
| !! | CAGTTTCTGAAACACGTCGC+CGG | - | chr8.1:86905573-86905592 | MS.gene055381:CDS | 50.0% |
| !! | GAATTTTGAGAAAGCGGCGG+TGG | - | chr8.1:86906159-86906178 | MS.gene055381:intron | 50.0% |
| !! | TTTGGACCGGCTTTTGGCAT+GGG | - | chr8.1:86906583-86906602 | MS.gene055381:intron | 50.0% |
| ACAACGAAGAAACGGTGCGG+CGG | - | chr8.1:86905312-86905331 | MS.gene055381:CDS | 55.0% | |
| CGAGAAGCGAGTTTCCGAAC+TGG | - | chr8.1:86905651-86905670 | MS.gene055381:CDS | 55.0% | |
| CTGCTTCCTTCATGAGACGG+CGG | + | chr8.1:86905349-86905368 | None:intergenic | 55.0% | |
| GAAAACGGCGGGAATGTCGT+CGG | + | chr8.1:86905480-86905499 | None:intergenic | 55.0% | |
| GCCTATGCTCCACTTTGGAC+CGG | - | chr8.1:86906570-86906589 | MS.gene055381:intron | 55.0% | |
| TCCGGTGAGAAAAGACGAGG+AGG | - | chr8.1:86906072-86906091 | MS.gene055381:intron | 55.0% | |
| TGCCAAAAGCCGGTCCAAAG+TGG | + | chr8.1:86906582-86906601 | None:intergenic | 55.0% | |
| ! | CAGTGTCTGGAACACGGTCA+AGG | + | chr8.1:86909115-86909134 | None:intergenic | 55.0% |
| ! | GTACGGGTAGTGTAGTGGGA+GGG | - | chr8.1:86906722-86906741 | MS.gene055381:intron | 55.0% |
| ! | TGTACGGGTAGTGTAGTGGG+AGG | - | chr8.1:86906721-86906740 | MS.gene055381:intron | 55.0% |
| !! | CTCCACTTTGGACCGGCTTT+TGG | - | chr8.1:86906577-86906596 | MS.gene055381:intron | 55.0% |
| !! | CTTTGGACCGGCTTTTGGCA+TGG | - | chr8.1:86906582-86906601 | MS.gene055381:intron | 55.0% |
| !! | GGTTCGGTGTAGTGATTGGG+AGG | - | chr8.1:86905946-86905965 | MS.gene055381:CDS | 55.0% |
| !! | TGCCGGTTCACTTGAAGGAC+CGG | - | chr8.1:86906535-86906554 | MS.gene055381:intron | 55.0% |
| AATCAGAATGAGCCGCCGCG+AGG | + | chr8.1:86905388-86905407 | None:intergenic | 60.0% | |
| ATGTCGTCGGAGACAGCGAG+AGG | + | chr8.1:86905467-86905486 | None:intergenic | 60.0% | |
| CATAGGCTCTTTGGACCGCC+CGG | + | chr8.1:86906557-86906576 | None:intergenic | 60.0% | |
| GCCCGGTCCTTCAAGTGAAC+CGG | + | chr8.1:86906540-86906559 | None:intergenic | 60.0% | |
| GCCGGTCCAAAGTGGAGCAT+AGG | + | chr8.1:86906574-86906593 | None:intergenic | 60.0% | |
| GCTTCCGAAGCGACAGTGTC+TGG | + | chr8.1:86909128-86909147 | None:intergenic | 60.0% | |
| GGAGACAGCGAGAGGTTCAC+CGG | + | chr8.1:86905459-86905478 | None:intergenic | 60.0% | |
| GGTGGCCGGAGATCGGTTAT+CGG | - | chr8.1:86906177-86906196 | MS.gene055381:intron | 60.0% | |
| GGTTCACTTGAAGGACCGGG+CGG | - | chr8.1:86906539-86906558 | MS.gene055381:intron | 60.0% | |
| GTTGTTACGGTGGCTGGACG+AGG | + | chr8.1:86905539-86905558 | None:intergenic | 60.0% | |
| TCACCGCCGGGAACAAACTC+CGG | + | chr8.1:86906049-86906068 | None:intergenic | 60.0% | |
| TCGGCGGTTGAGAACGTTGC+CGG | + | chr8.1:86905784-86905803 | None:intergenic | 60.0% | |
| TCTCACCGGAACATCACCGC+CGG | + | chr8.1:86906062-86906081 | None:intergenic | 60.0% | |
| TGTTCCCGGCGGTGATGTTC+CGG | - | chr8.1:86906054-86906073 | MS.gene055381:CDS | 60.0% | |
| TTACGCTCGCCACTACCTCG+CGG | - | chr8.1:86905370-86905389 | MS.gene055381:CDS | 60.0% | |
| TTTGAGAAAGCGGCGGTGGC+CGG | - | chr8.1:86906163-86906182 | MS.gene055381:intron | 60.0% | |
| ! | GAAGGTGGAGAGTGCGGAAC+CGG | + | chr8.1:86905432-86905451 | None:intergenic | 60.0% |
| ! | GCCGGTTCACTTGAAGGACC+GGG | - | chr8.1:86906536-86906555 | MS.gene055381:intron | 60.0% |
| ! | TCACCGGAGTTTGTTCCCGG+CGG | - | chr8.1:86906043-86906062 | MS.gene055381:CDS | 60.0% |
| AATGAGCCGCCGCGAGGTAG+TGG | + | chr8.1:86905382-86905401 | None:intergenic | 65.0% | |
| CTCACCGGAACATCACCGCC+GGG | + | chr8.1:86906061-86906080 | None:intergenic | 65.0% | |
| GACAGCGAGAGGTTCACCGG+CGG | + | chr8.1:86905456-86905475 | None:intergenic | 65.0% | |
| GTTACGGTGGCTGGACGAGG+AGG | + | chr8.1:86905536-86905555 | None:intergenic | 65.0% | |
| ! | TGGAGAGTGCGGAACCGGTG+AGG | + | chr8.1:86905427-86905446 | None:intergenic | 65.0% |
| !! | AGAGCGCCGCCGTCTCATGA+AGG | - | chr8.1:86905340-86905359 | MS.gene055381:CDS | 65.0% |
| AAGCGGCGGTGGCCGGAGAT+CGG | - | chr8.1:86906170-86906189 | MS.gene055381:intron | 70.0% | |
| ACGGTGGCTGGACGAGGAGG+TGG | + | chr8.1:86905533-86905552 | None:intergenic | 70.0% | |
| AGGTTCACCGGCGGCGAAGG+TGG | + | chr8.1:86905447-86905466 | None:intergenic | 70.0% | |
| GAGAGGTTCACCGGCGGCGA+AGG | + | chr8.1:86905450-86905469 | None:intergenic | 70.0% | |
| GCACTCTCCACCTTCGCCGC+CGG | - | chr8.1:86905437-86905456 | MS.gene055381:CDS | 70.0% | |
| GGCGGCGAAGGTGGAGAGTG+CGG | + | chr8.1:86905438-86905457 | None:intergenic | 70.0% | |
| GTGGCTGGACGAGGAGGTGG+CGG | + | chr8.1:86905530-86905549 | None:intergenic | 70.0% | |
| CGCTCGCCACTACCTCGCGG+CGG | - | chr8.1:86905373-86905392 | MS.gene055381:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 86905287 | 86909583 | 86905287 | ID=MS.gene055381 |
| chr8.1 | mRNA | 86905287 | 86909583 | 86905287 | ID=MS.gene055381.t1;Parent=MS.gene055381 |
| chr8.1 | exon | 86908617 | 86909583 | 86908617 | ID=MS.gene055381.t1.exon1;Parent=MS.gene055381.t1 |
| chr8.1 | CDS | 86908617 | 86909583 | 86908617 | ID=cds.MS.gene055381.t1;Parent=MS.gene055381.t1 |
| chr8.1 | exon | 86908239 | 86908423 | 86908239 | ID=MS.gene055381.t1.exon2;Parent=MS.gene055381.t1 |
| chr8.1 | CDS | 86908239 | 86908423 | 86908239 | ID=cds.MS.gene055381.t1;Parent=MS.gene055381.t1 |
| chr8.1 | exon | 86907232 | 86907458 | 86907232 | ID=MS.gene055381.t1.exon3;Parent=MS.gene055381.t1 |
| chr8.1 | CDS | 86907232 | 86907458 | 86907232 | ID=cds.MS.gene055381.t1;Parent=MS.gene055381.t1 |
| chr8.1 | exon | 86905287 | 86906088 | 86905287 | ID=MS.gene055381.t1.exon4;Parent=MS.gene055381.t1 |
| chr8.1 | CDS | 86905287 | 86906088 | 86905287 | ID=cds.MS.gene055381.t1;Parent=MS.gene055381.t1 |
| Gene Sequence |
| Protein sequence |
