AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91781


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91781.t1 MTR_8g006850 94.925 729 25 3 1 723 1 723 0.0 1374
MS.gene91781.t1 MTR_7g081705 68.620 529 126 7 227 723 323 843 0.0 702
MS.gene91781.t1 MTR_5g022530 39.341 455 241 9 277 719 204 635 9.50e-93 302
MS.gene91781.t1 MTR_5g022530 55.932 59 26 0 1 59 1 59 1.15e-11 68.6
MS.gene91781.t1 MTR_2g048360 31.195 452 276 8 277 719 208 633 8.16e-52 191
MS.gene91781.t1 MTR_3g109450 28.889 450 281 11 279 715 277 700 1.92e-51 191
MS.gene91781.t1 MTR_2g102050 28.733 442 298 9 269 705 309 738 2.35e-48 182
MS.gene91781.t1 MTR_2g102050 57.627 59 25 0 1 59 1 59 2.37e-14 77.4
MS.gene91781.t1 MTR_3g088190 26.306 536 355 9 213 715 371 899 6.54e-44 170
MS.gene91781.t1 MTR_4g012430 31.785 409 249 11 270 672 119 503 5.04e-43 163
MS.gene91781.t1 MTR_1g112850 28.027 446 294 9 277 705 274 709 3.83e-41 161
MS.gene91781.t1 MTR_1g021280 78.095 105 18 2 34 138 32 131 6.97e-39 140
MS.gene91781.t1 MTR_5g098980 24.208 442 280 11 281 711 358 755 1.76e-26 115
MS.gene91781.t1 MTR_4g127620 26.765 340 228 7 272 597 330 662 5.87e-26 114
MS.gene91781.t1 MTR_3g115120 25.828 453 256 12 277 706 275 670 8.41e-26 113
MS.gene91781.t1 MTR_5g087740 33.621 232 137 5 361 583 429 652 4.48e-25 111
MS.gene91781.t1 MTR_3g096950 27.536 345 236 6 362 705 433 764 1.09e-24 110
MS.gene91781.t1 MTR_8g091250 29.433 282 182 8 337 607 353 628 2.22e-23 105
MS.gene91781.t1 MTR_3g078830 32.751 229 147 3 361 585 445 670 2.95e-23 105
MS.gene91781.t1 MTR_2g036920 38.547 179 98 4 364 532 570 746 3.04e-23 105
MS.gene91781.t1 MTR_2g036920 38.547 179 98 4 364 532 599 775 3.16e-23 105
MS.gene91781.t1 MTR_8g015290 71.287 101 21 3 31 128 27 122 7.40e-21 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91781.t1 AT1G02110 57.276 749 246 17 1 722 1 702 0.0 794
MS.gene91781.t1 AT3G60320 55.886 807 261 16 1 723 1 796 0.0 769
MS.gene91781.t1 AT3G51290 40.889 450 241 9 277 722 200 628 1.62e-95 310
MS.gene91781.t1 AT3G51290 41.111 450 240 9 277 722 200 628 1.64e-93 308
MS.gene91781.t1 AT3G51290 40.444 450 237 10 277 722 200 622 8.77e-90 294
MS.gene91781.t1 AT2G34670 34.605 367 223 6 350 715 324 674 7.12e-61 217
MS.gene91781.t1 AT1G52320 29.314 423 278 9 288 705 34 440 1.29e-50 184
MS.gene91781.t1 AT1G52320 29.314 423 278 9 288 705 34 440 1.29e-50 184
MS.gene91781.t1 AT1G52320 29.314 423 278 9 288 705 337 743 1.02e-49 187
MS.gene91781.t1 AT1G52320 29.314 423 278 9 288 705 360 766 1.71e-49 186
MS.gene91781.t1 AT1G52320 29.314 423 278 9 288 705 360 766 1.71e-49 186
MS.gene91781.t1 AT1G21740 28.667 450 305 8 277 715 497 941 4.27e-45 174
MS.gene91781.t1 AT1G77500 27.655 452 284 9 277 715 449 870 1.50e-39 157
MS.gene91781.t1 AT2G34670 33.628 226 142 4 350 575 324 541 2.24e-32 133
MS.gene91781.t1 AT4G35240 24.777 448 297 7 277 719 419 831 4.44e-29 124
MS.gene91781.t1 AT4G35240 24.777 448 297 7 277 719 419 831 4.44e-29 124
MS.gene91781.t1 AT4G35240 24.777 448 297 7 277 719 419 831 6.61e-29 124
MS.gene91781.t1 AT4G35240 24.777 448 297 7 277 719 419 831 6.61e-29 124
MS.gene91781.t1 AT2G17110 28.691 359 234 9 246 589 279 630 1.71e-28 122
MS.gene91781.t1 AT2G27090 33.621 232 144 6 361 587 425 651 8.53e-25 110
MS.gene91781.t1 AT2G27090 33.621 232 144 6 361 587 425 651 8.53e-25 110
MS.gene91781.t1 AT5G54480 26.178 382 233 10 258 621 294 644 1.97e-23 106
MS.gene91781.t1 AT1G20530 26.546 388 246 10 278 649 232 596 2.58e-23 105
MS.gene91781.t1 AT4G30130 31.429 245 153 5 364 597 401 641 6.77e-22 101
MS.gene91781.t1 AT4G30130 31.429 245 153 5 364 597 401 641 6.77e-22 101
MS.gene91781.t1 AT4G39790 31.250 224 147 5 364 583 375 595 1.34e-21 100
MS.gene91781.t1 AT2G19090 30.364 247 155 5 364 597 482 724 2.05e-21 100
MS.gene91781.t1 AT4G30130 43.210 81 45 1 364 444 401 480 1.02e-11 68.6
MS.gene91781.t1 AT4G30130 43.210 81 45 1 364 444 401 480 1.02e-11 68.6
MS.gene91781.t1 AT5G25590 54.237 59 27 0 1 59 1 59 1.12e-11 68.9

Find 159 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATAAATTACCTACTTTA+TGG 0.098163 8.3:+81205988 None:intergenic
TGCCGGAAATATTCGGAATT+TGG 0.192821 8.3:+81209755 None:intergenic
CTCCACTTTGGACCGGCTTT+TGG 0.216350 8.3:-81208941 MS.gene91781:CDS
CAGCTGCCATCAATGGTCTT+AGG 0.218432 8.3:-81207992 MS.gene91781:CDS
CTCCAAATTCCGAATATTTC+CGG 0.231370 8.3:-81209757 MS.gene91781:CDS
TCTGATGATGTATCGGATTC+TGG 0.247422 8.3:+81209698 None:intergenic
CCAATATCTTCCACAGAGTT+TGG 0.255194 8.3:+81206238 None:intergenic
GTCAAGAACTCAAGATTAAA+AGG 0.266491 8.3:-81206366 MS.gene91781:CDS
CCAAACTCTGTGGAAGATAT+TGG 0.303854 8.3:-81206238 MS.gene91781:CDS
ATGGGAAAACAAACTCTTTC+AGG 0.306558 8.3:-81208917 MS.gene91781:CDS
AAACTTCTTCCGTTTGGAAC+TGG 0.310325 8.3:-81209805 MS.gene91781:CDS
AGGTTTGCCTGGAATGTTTC+AGG 0.312214 8.3:-81206074 MS.gene91781:CDS
CAATGTTGCTTTGCATTTCA+TGG 0.320663 8.3:+81206746 None:intergenic
CGGAGATGTTGCAGATTAGT+AGG 0.332632 8.3:-81209331 MS.gene91781:CDS
AGAACGTTGCCGGAAATATT+CGG 0.340163 8.3:+81209748 None:intergenic
TCATATTCTATGGTTGGTAT+TGG 0.351215 8.3:-81206268 MS.gene91781:CDS
AAAGTGGAGCAGAGGCTCTT+TGG 0.352489 8.3:+81208955 None:intergenic
TGTTGCCGGCGGTGAGGTTC+CGG 0.353203 8.3:-81209474 MS.gene91781:CDS
CAGCAGCATTAGCAACAAAA+TGG 0.360224 8.3:-81206515 MS.gene91781:CDS
TCACCGCCGGCAACAAATTC+CGG 0.362313 8.3:+81209482 None:intergenic
GCTTCCGAAGCGACAGTGTC+TGG 0.370101 8.3:+81206436 None:intergenic
CTTCTGAAACTTCTTCCGTT+TGG 0.372515 8.3:-81209811 MS.gene91781:CDS
AACACGTCGCCGGAAAATTC+CGG 0.375532 8.3:-81209936 MS.gene91781:CDS
TGCTTTGCATTTCATGGTAC+TGG 0.376222 8.3:+81206752 None:intergenic
TTTGTGGTTGTTACGGTGGC+TGG 0.385764 8.3:+81209977 None:intergenic
AACTGCCAATGGTGGCTTTG+AGG 0.395022 8.3:+81209020 None:intergenic
TTTGATGCCGGTTCACTTGA+AGG 0.399037 8.3:-81208988 MS.gene91781:CDS
TAGTGACTGTAACCTTGTTA+TGG 0.407255 8.3:+81208049 None:intergenic
AGTGCGCCGCCGCGAGGTAG+TGG 0.407782 8.3:+81210140 None:intergenic
TTGAGTGACCTTTCGATGAT+TGG 0.408622 8.3:+81206698 None:intergenic
AGGAGGTTCGGTGTAGTGAT+TGG 0.415100 8.3:-81209565 MS.gene91781:CDS
GTCAATGCCTGAAACATTCC+AGG 0.419912 8.3:+81206067 None:intergenic
TCGGCGGTTGAGAACGTTGC+CGG 0.420345 8.3:+81209738 None:intergenic
AGCTGCCATCAATGGTCTTA+GGG 0.421008 8.3:-81207991 MS.gene91781:CDS
CAGCTTGTTGAGCTTTGTCA+TGG 0.421587 8.3:-81207951 MS.gene91781:CDS
AGTTGCCTGTTTGTGTGATT+CGG 0.424981 8.3:+81206672 None:intergenic
GCCCGGTCCTTCAAGTGAAC+CGG 0.428595 8.3:+81208981 None:intergenic
AACTTCTTCCGTTTGGAACT+GGG 0.429013 8.3:-81209804 MS.gene91781:CDS
AGAGTCCCTAAGACCATTGA+TGG 0.436049 8.3:+81207986 None:intergenic
TAACCTTGTTATGGTAGCCT+TGG 0.439375 8.3:+81208058 None:intergenic
AACATCCGAATCACACAAAC+AGG 0.442893 8.3:-81206677 MS.gene91781:CDS
AACATTGTACAGCAAGTTTG+TGG 0.443164 8.3:-81206730 MS.gene91781:CDS
AAATCACCGGAATTTGTTGC+CGG 0.450095 8.3:-81209488 MS.gene91781:CDS
AATCTACAGACAGGTTTGCC+TGG 0.453101 8.3:-81206085 MS.gene91781:CDS
GAAGGTGGAGAGTGCGGAAC+CGG 0.456738 8.3:+81210090 None:intergenic
CACCATTGGCAGTTAAATAC+CGG 0.462465 8.3:-81209011 MS.gene91781:CDS
TTGTTGTTGTCATTGTTGAC+TGG 0.464323 8.3:+81206538 None:intergenic
CGAGGAGGTGAATGAAGAAA+AGG 0.465133 8.3:-81209441 MS.gene91781:CDS
TATTCGGAATTTGGAGGAGA+AGG 0.467016 8.3:+81209764 None:intergenic
GGAGGTTCGGTGTAGTGATT+GGG 0.467726 8.3:-81209564 MS.gene91781:CDS
TGCCGGTTCACTTGAAGGAC+CGG 0.468386 8.3:-81208983 MS.gene91781:CDS
ACTAATTATTGTAACATCTC+AGG 0.470791 8.3:-81208030 MS.gene91781:CDS
GTTAAATACCGGTTTGATGC+CGG 0.472409 8.3:-81209000 MS.gene91781:CDS
CAGTTCGGAAACTCGCTTCT+CGG 0.476259 8.3:+81209869 None:intergenic
TCGGAATTTGGAGGAGAAGG+AGG 0.477917 8.3:+81209767 None:intergenic
GAAAACTGACACTGCTTACA+AGG 0.482447 8.3:-81206344 MS.gene91781:CDS
TACAACTCATATTCTATGGT+TGG 0.486108 8.3:-81206274 MS.gene91781:CDS
AAAGGTGAAGATGAAGCATA+AGG 0.487575 8.3:-81209423 MS.gene91781:CDS
AAACGGAACGTGAGGAGGTT+CGG 0.488757 8.3:-81209577 MS.gene91781:CDS
AAAGAGCCTCTGCTCCACTT+TGG 0.490480 8.3:-81208953 MS.gene91781:CDS
CGTTGAACAAACGCTTGAAT+CGG 0.491262 8.3:+81209892 None:intergenic
TTTGAGAAAGCGGCGGTGGC+CGG 0.491434 8.3:-81209365 MS.gene91781:CDS
ACGGTGGCTGGACGAGGAGG+TGG 0.495073 8.3:+81209989 None:intergenic
GAATTTGGAGGAGAAGGAGG+AGG 0.496035 8.3:+81209770 None:intergenic
TGTTCCAGACACTGTCGCTT+CGG 0.496334 8.3:-81206440 MS.gene91781:CDS
ACCTCCTCGTCTTTCCTCAC+CGG 0.497977 8.3:+81209455 None:intergenic
ACTACCTCAGCTGCCATCAA+TGG 0.500376 8.3:-81207999 MS.gene91781:CDS
ACCTGAAACAATGGGTTGCA+CGG 0.501443 8.3:-81210242 None:intergenic
GAAGCATTCGAAGGCTATTG+AGG 0.506274 8.3:-81206131 MS.gene91781:CDS
GCACTCTCCACCTTCGCCGC+CGG 0.510838 8.3:-81210082 MS.gene91781:CDS
GTGTGAAGATTGAGCATGAA+AGG 0.511307 8.3:-81208145 MS.gene91781:CDS
AGGTTCACCGGCGGCGAAGG+TGG 0.514217 8.3:+81210075 None:intergenic
AGAATGTGTGGAAGCTTCAC+CGG 0.514510 8.3:+81209917 None:intergenic
TAGTTTCCATCCATCACAAA+AGG 0.515874 8.3:+81206474 None:intergenic
CGGAAATATTCGGAATTTGG+AGG 0.517284 8.3:+81209758 None:intergenic
GGTGGCCGGAGATCGGTTAT+CGG 0.518645 8.3:-81209351 MS.gene91781:CDS
GTTGTTACGGTGGCTGGACG+AGG 0.518756 8.3:+81209983 None:intergenic
GAGAGGTTCACCGGCGGCGA+AGG 0.519230 8.3:+81210072 None:intergenic
GTGGCTGGACGAGGAGGTGG+CGG 0.521485 8.3:+81209992 None:intergenic
GGAACAAGAACTAGATCGAT+TGG 0.523973 8.3:-81209600 MS.gene91781:CDS
AGCTTGTTGAGCTTTGTCAT+GGG 0.524450 8.3:-81207950 MS.gene91781:intron
CGAGAAGCGAGTTTCCGAAC+TGG 0.524694 8.3:-81209868 MS.gene91781:CDS
TAGAATCAGCTCTGTCAGCT+TGG 0.525936 8.3:-81206642 MS.gene91781:CDS
CTTTCGATGATTGGTTCACA+AGG 0.529959 8.3:+81206707 None:intergenic
CAAGTGAACCGGCATCAAAC+CGG 0.530021 8.3:+81208992 None:intergenic
TGAGCAAAGTGAGCTCAACT+TGG 0.530284 8.3:-81209044 MS.gene91781:CDS
AAGCGGCGGTGGCCGGAGAT+CGG 0.531676 8.3:-81209358 MS.gene91781:CDS
CAGAGGCTCTTTGGACCGCC+CGG 0.533714 8.3:+81208964 None:intergenic
GGAAGATATTGGACAAGGCT+TGG 0.535265 8.3:-81206227 MS.gene91781:CDS
AGAACTAGATCGATTGGAAA+CGG 0.539459 8.3:-81209594 MS.gene91781:CDS
TCAGAATCACAAGACTGAAA+CGG 0.540629 8.3:-81209621 MS.gene91781:CDS
TCAACCGCCGAATCATAAAC+CGG 0.541451 8.3:-81209726 MS.gene91781:CDS
ACACTTAATAATCTACAGAC+AGG 0.546583 8.3:-81206094 MS.gene91781:CDS
GCCTCTGCTCCACTTTGGAC+CGG 0.546977 8.3:-81208948 MS.gene91781:CDS
TTGCTTAATTAGGCTAGAGA+AGG 0.551085 8.3:-81208167 MS.gene91781:intron
ATTGGAAACGGAACGTGAGG+AGG 0.556480 8.3:-81209582 MS.gene91781:CDS
GAACGATTCTGATGATGTAT+CGG 0.557299 8.3:+81209691 None:intergenic
TTAGTAGGGCTCAACTTGAT+CGG 0.558121 8.3:-81209316 MS.gene91781:CDS
GGAGATGTTGCAGATTAGTA+GGG 0.562230 8.3:-81209330 MS.gene91781:CDS
GCGGTTGGAATGAACCAGTT+CGG 0.568073 8.3:+81209854 None:intergenic
GGAATTTGTTGCCGGCGGTG+AGG 0.568540 8.3:-81209480 MS.gene91781:CDS
AAAATTCTCCCAGTTCCAAA+CGG 0.570472 8.3:+81209796 None:intergenic
CAAAAGGAAAATGCATCAGA+TGG 0.571615 8.3:+81206490 None:intergenic
TAAACTCGACAACGAAGAAA+CGG 0.572183 8.3:-81210215 MS.gene91781:CDS
AACCGGTATTTAACTGCCAA+TGG 0.572575 8.3:+81209009 None:intergenic
CCGTTCATATGCCATAAAGT+AGG 0.573938 8.3:-81205999 None:intergenic
TTGGACCTCAAAGCCACCAT+TGG 0.576071 8.3:-81209025 MS.gene91781:CDS
GGAGACAGCGAGAGGTTCAC+CGG 0.577083 8.3:+81210063 None:intergenic
CAGTGTCTGGAACACGGTCA+AGG 0.579288 8.3:+81206449 None:intergenic
TGCCAAAAGCCGGTCCAAAG+TGG 0.581464 8.3:+81208939 None:intergenic
CAAACTCTTTCAGGAAGTGA+AGG 0.582816 8.3:-81208908 MS.gene91781:intron
TCTGCAGAGTGAAGAATGCA+AGG 0.582873 8.3:-81208111 MS.gene91781:CDS
TGTAACTCTCTTCGCCTCAC+CGG 0.588335 8.3:-81210109 MS.gene91781:CDS
GCCGGTTCACTTGAAGGACC+GGG 0.588752 8.3:-81208982 MS.gene91781:CDS
AGAGCGCCGCCGTCTCATGA+AGG 0.589240 8.3:-81210179 MS.gene91781:CDS
GCCGGTCCAAAGTGGAGCAG+AGG 0.591183 8.3:+81208947 None:intergenic
CATCTCCGATAACCGATCTC+CGG 0.591527 8.3:+81209346 None:intergenic
GGTTCGGTGTAGTGATTGGG+AGG 0.592402 8.3:-81209561 MS.gene91781:CDS
CAGTTTCTGAAACACGTCGC+CGG 0.594202 8.3:-81209946 MS.gene91781:CDS
AGTGTCTGGAACACGGTCAA+GGG 0.596369 8.3:+81206450 None:intergenic
AAGACCATTGATGGCAGCTG+AGG 0.609697 8.3:+81207995 None:intergenic
GGCGGCGAAGGTGGAGAGTG+CGG 0.611743 8.3:+81210084 None:intergenic
GTTACGGTGGCTGGACGAGG+AGG 0.611751 8.3:+81209986 None:intergenic
CGGTATTTAACTGCCAATGG+TGG 0.612149 8.3:+81209012 None:intergenic
GACGTGTTTCAGAAACTGTA+CGG 0.616647 8.3:+81209951 None:intergenic
ACTGTGTTGATGAAAACGGC+GGG 0.618606 8.3:+81210031 None:intergenic
GAAAACGGCGGGAATGTCGT+CGG 0.622356 8.3:+81210042 None:intergenic
TGGAATAATTCCAAACTCTG+TGG 0.623866 8.3:-81206248 MS.gene91781:CDS
AACATAGAATCATTCACATG+TGG 0.629855 8.3:-81206786 MS.gene91781:intron
TGAAAAGTTGAAGCATTCGA+AGG 0.634173 8.3:-81206140 MS.gene91781:CDS
CTTGAATCGGAGAGAATGTG+TGG 0.636876 8.3:+81209905 None:intergenic
TCGATTGGAAACGGAACGTG+AGG 0.636903 8.3:-81209585 MS.gene91781:CDS
CAGAGTGAAGAATGCAAGGG+AGG 0.640119 8.3:-81208107 MS.gene91781:CDS
CCTACTTTATGGCATATGAA+CGG 0.642947 8.3:+81205999 None:intergenic
TGACAAAGCTCAACAAGCTG+AGG 0.646039 8.3:+81207954 None:intergenic
TGGAGAGTGCGGAACCGGTG+AGG 0.647266 8.3:+81210095 None:intergenic
AAACCAAGGCTACCATAACA+AGG 0.647826 8.3:-81208061 MS.gene91781:CDS
TCACCGGAATTTGTTGCCGG+CGG 0.648273 8.3:-81209485 MS.gene91781:CDS
CTTGTGAACCAATCATCGAA+AGG 0.650319 8.3:-81206706 MS.gene91781:CDS
AAGCGACAGTGTCTGGAACA+CGG 0.656033 8.3:+81206443 None:intergenic
CGCTCGCCACTACCTCGCGG+CGG 0.656448 8.3:-81210146 MS.gene91781:CDS
ATTGCTTAACTGATATTACG+TGG 0.657821 8.3:+81206389 None:intergenic
CCTCACCGGAACCTCACCGC+CGG 0.660549 8.3:+81209469 None:intergenic
ATGTCGTCGGAGACAGCGAG+AGG 0.661397 8.3:+81210055 None:intergenic
TACTGTGTTGATGAAAACGG+CGG 0.666428 8.3:+81210030 None:intergenic
CTGCAGAGTGAAGAATGCAA+GGG 0.667767 8.3:-81208110 MS.gene91781:CDS
AACAAAGATAGACAAAACCA+AGG 0.673276 8.3:-81208075 MS.gene91781:CDS
TCCGGTGAGGAAAGACGAGG+AGG 0.676721 8.3:-81209456 MS.gene91781:CDS
ACAACGAAGAAACGGTGCGG+CGG 0.676785 8.3:-81210207 MS.gene91781:CDS
CCGGCGGTGAGGTTCCGGTG+AGG 0.679781 8.3:-81209469 MS.gene91781:CDS
AATCAGAGTGCGCCGCCGCG+AGG 0.683669 8.3:+81210134 None:intergenic
TCTGTGGAAGATATTGGACA+AGG 0.692232 8.3:-81206232 MS.gene91781:CDS
AAACTGCTTCCTTCATGAGA+CGG 0.693412 8.3:+81210170 None:intergenic
CTGCTTCCTTCATGAGACGG+CGG 0.713162 8.3:+81210173 None:intergenic
GACAGCGAGAGGTTCACCGG+CGG 0.729279 8.3:+81210066 None:intergenic
TTACGCTCGCCACTACCTCG+CGG 0.753107 8.3:-81210149 MS.gene91781:CDS
TCGACAACGAAGAAACGGTG+CGG 0.756888 8.3:-81210210 MS.gene91781:CDS
GGTTCCGGTGAGGAAAGACG+AGG 0.762077 8.3:-81209459 MS.gene91781:CDS
GGTTCACTTGAAGGACCGGG+CGG 0.787079 8.3:-81208979 MS.gene91781:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATCATATATTTAAATTG+GGG - chr8.3:81208411-81208430 MS.gene91781:intron 10.0%
!! AAATAGTATTTGAGAAAATA+TGG - chr8.3:81208612-81208631 MS.gene91781:intron 15.0%
!! ATATTGAAATTTGAATTGTA+AGG + chr8.3:81209232-81209251 None:intergenic 15.0%
!! ATGAAATTGGAAAATTATAA+TGG - chr8.3:81209154-81209173 MS.gene91781:intron 15.0%
!! TAATCATATATTTAAATTGG+GGG - chr8.3:81208412-81208431 MS.gene91781:intron 15.0%
!! TATTGAAATTTGAATTGTAA+GGG + chr8.3:81209231-81209250 None:intergenic 15.0%
!!! CAAATACTATTTCAAAATTT+TGG + chr8.3:81208604-81208623 None:intergenic 15.0%
!!! TAATTTTTTGAACAATGTAA+AGG - chr8.3:81207395-81207414 MS.gene91781:intron 15.0%
!!! TATAAACTTGATAATCATAA+AGG - chr8.3:81209249-81209268 MS.gene91781:intron 15.0%
!! AGATTTATATCTGAAGAAAT+TGG - chr8.3:81207065-81207084 MS.gene91781:intron 20.0%
!! TCTAAATACTCATCTAAATT+AGG - chr8.3:81208008-81208027 MS.gene91781:CDS 20.0%
!! TCTCAATACTAGTATATATA+TGG + chr8.3:81209287-81209306 None:intergenic 20.0%
!!! ATACTATTTCAAAATTTTGG+TGG + chr8.3:81208601-81208620 None:intergenic 20.0%
!!! ATTTAGAGTTAATTTGTGAA+GGG + chr8.3:81207995-81208014 None:intergenic 20.0%
!!! TAGTTTAGGTTGAATTAAAA+AGG + chr8.3:81207950-81207969 None:intergenic 20.0%
!!! TATTTAGAGTTAATTTGTGA+AGG + chr8.3:81207996-81208015 None:intergenic 20.0%
!!! TTTTGCTTAATTGCTTAATT+AGG - chr8.3:81208055-81208074 MS.gene91781:CDS 20.0%
! AACTTGATTCTACTGTATTA+TGG + chr8.3:81208754-81208773 None:intergenic 25.0%
! ACTAATTATTGTAACATCTC+AGG - chr8.3:81208202-81208221 MS.gene91781:intron 25.0%
! AGTGAACAAAAAATAACTTC+AGG + chr8.3:81208862-81208881 None:intergenic 25.0%
! ATTTGAGAGTTAATTCTCAA+TGG - chr8.3:81208707-81208726 MS.gene91781:intron 25.0%
! GTAACTGTCAACAAATAAAA+TGG + chr8.3:81209010-81209029 None:intergenic 25.0%
!! GGATTTAATGTTTTTCGTTA+TGG - chr8.3:81207086-81207105 MS.gene91781:intron 25.0%
!! GTTTTACAACTCATATTCTA+TGG - chr8.3:81209954-81209973 MS.gene91781:CDS 25.0%
!! TACGATAAATTTTCATGTTG+AGG - chr8.3:81207530-81207549 MS.gene91781:intron 25.0%
!! TTGATTTCATAATTTTGTCG+AGG - chr8.3:81207631-81207650 MS.gene91781:intron 25.0%
!!! AATAAAATGGTTTGCTCAAA+TGG + chr8.3:81208997-81209016 None:intergenic 25.0%
!!! ATAAAATGGTTTGCTCAAAT+GGG + chr8.3:81208996-81209015 None:intergenic 25.0%
!!! CTCTTTGAAATTTTATGATC+CGG + chr8.3:81209630-81209649 None:intergenic 25.0%
!!! GAAGTTATTTTTTGTTCACT+AGG - chr8.3:81208862-81208881 MS.gene91781:intron 25.0%
!!! TAAAAAGGAAGTGACTTTTT+TGG + chr8.3:81207935-81207954 None:intergenic 25.0%
!!! TGATTCAATTTCGAGTTATA+AGG - chr8.3:81207735-81207754 MS.gene91781:intron 25.0%
!!! TTGCAAGTTGATATTAGTTT+AGG + chr8.3:81207964-81207983 None:intergenic 25.0%
!!! TTTTACTGTGTTGATGAAAA+CGG + chr8.3:81206208-81206227 None:intergenic 25.0%
AACAAAGATAGACAAAACCA+AGG - chr8.3:81208157-81208176 MS.gene91781:CDS 30.0%
AACAATGTAAAGGTCTTCTA+GGG - chr8.3:81207405-81207424 MS.gene91781:intron 30.0%
AACATAGAATCATTCACATG+TGG - chr8.3:81209446-81209465 MS.gene91781:CDS 30.0%
ACACTTAATAATCTACAGAC+AGG - chr8.3:81210138-81210157 MS.gene91781:CDS 30.0%
ACTTATATCTAAGTTCAGAG+AGG + chr8.3:81208334-81208353 None:intergenic 30.0%
ATGTCTCTCTATTCTACTAT+TGG - chr8.3:81208306-81208325 MS.gene91781:intron 30.0%
ATTGCTTAACTGATATTACG+TGG + chr8.3:81209846-81209865 None:intergenic 30.0%
CAATTTCATATACTATTGCC+AGG + chr8.3:81209143-81209162 None:intergenic 30.0%
CATGTGAATGATTCTATGTT+TGG + chr8.3:81209446-81209465 None:intergenic 30.0%
CTGGCAATAGTATATGAAAT+TGG - chr8.3:81209141-81209160 MS.gene91781:intron 30.0%
CTTATATCTAAGTTCAGAGA+GGG + chr8.3:81208333-81208352 None:intergenic 30.0%
GAACATAGTAGCATATTTCT+TGG - chr8.3:81209176-81209195 MS.gene91781:intron 30.0%
GGTAGTGTAGTAATAATTGA+TGG - chr8.3:81207427-81207446 MS.gene91781:intron 30.0%
GTATTTGCACAATGTATGAA+AGG - chr8.3:81208437-81208456 MS.gene91781:intron 30.0%
GTCAAGAACTCAAGATTAAA+AGG - chr8.3:81209866-81209885 MS.gene91781:CDS 30.0%
GTGTGTTTGATATTCAATCA+AGG - chr8.3:81208524-81208543 MS.gene91781:intron 30.0%
TACAACTCATATTCTATGGT+TGG - chr8.3:81209958-81209977 MS.gene91781:CDS 30.0%
TATCTTATTCACATATGAGC+TGG - chr8.3:81208367-81208386 MS.gene91781:intron 30.0%
TCTACTGTATTATGGCAATA+CGG + chr8.3:81208746-81208765 None:intergenic 30.0%
TTGATGCACAACAATAATGT+AGG + chr8.3:81209358-81209377 None:intergenic 30.0%
! AACAAATTCCGGTGATTTTT+CGG + chr8.3:81206742-81206761 None:intergenic 30.0%
! AATACAGTAGAATCAAGTTG+TGG - chr8.3:81208755-81208774 MS.gene91781:intron 30.0%
! ATTGCTATTCGTACTTTCAT+TGG - chr8.3:81208574-81208593 MS.gene91781:intron 30.0%
! ATTTCTTGGTAAAGCATCTT+TGG - chr8.3:81209190-81209209 MS.gene91781:intron 30.0%
! TCATATTCTATGGTTGGTAT+TGG - chr8.3:81209964-81209983 MS.gene91781:CDS 30.0%
! TTGCTATTCGTACTTTCATT+GGG - chr8.3:81208575-81208594 MS.gene91781:intron 30.0%
!! AAGAGAGAATTTTGAGAAAG+CGG - chr8.3:81206857-81206876 MS.gene91781:intron 30.0%
!! TAAAATGGTTTGCTCAAATG+GGG + chr8.3:81208995-81209014 None:intergenic 30.0%
!! TATGAAGATGAATTTTCGAG+TGG + chr8.3:81206578-81206597 None:intergenic 30.0%
!! TTATTTTGTCACTACATGGT+TGG - chr8.3:81209653-81209672 MS.gene91781:CDS 30.0%
!!! GACTTTATTTTGTCACTACA+TGG - chr8.3:81209649-81209668 MS.gene91781:CDS 30.0%
!!! TATTTTTTGTTCACTAGGTG+TGG - chr8.3:81208867-81208886 MS.gene91781:intron 30.0%
AAAATTCTCCCAGTTCCAAA+CGG + chr8.3:81206439-81206458 None:intergenic 35.0%
AAAGGTGAAGATGAAGCATA+AGG - chr8.3:81206809-81206828 MS.gene91781:intron 35.0%
AACACTAAAACACCTAAAGC+AGG + chr8.3:81207575-81207594 None:intergenic 35.0%
AACATTGTACAGCAAGTTTG+TGG - chr8.3:81209502-81209521 MS.gene91781:CDS 35.0%
ACAATGTAAAGGTCTTCTAG+GGG - chr8.3:81207406-81207425 MS.gene91781:intron 35.0%
AGAACTAGATCGATTGGAAA+CGG - chr8.3:81206638-81206657 MS.gene91781:CDS 35.0%
AGGGAAACAACTATACAGAA+TGG + chr8.3:81209111-81209130 None:intergenic 35.0%
ATGAGATAGTCAACAAAGTC+AGG - chr8.3:81208490-81208509 MS.gene91781:intron 35.0%
ATGGGAAAACAAACTCTTTC+AGG - chr8.3:81207315-81207334 MS.gene91781:intron 35.0%
CAAAAGGAAAATGCATCAGA+TGG + chr8.3:81209745-81209764 None:intergenic 35.0%
CAGTGAGTTAAGCAAAATCA+CGG + chr8.3:81207694-81207713 None:intergenic 35.0%
CTACTGTATTATGGCAATAC+GGG + chr8.3:81208745-81208764 None:intergenic 35.0%
CTCCAAATTCCGAATATTTC+CGG - chr8.3:81206475-81206494 MS.gene91781:CDS 35.0%
GAACAATGTAAAGGTCTTCT+AGG - chr8.3:81207404-81207423 MS.gene91781:intron 35.0%
TAAACTCGACAACGAAGAAA+CGG - chr8.3:81206017-81206036 MS.gene91781:CDS 35.0%
TAGTGACTGTAACCTTGTTA+TGG + chr8.3:81208186-81208205 None:intergenic 35.0%
TAGTTTCCATCCATCACAAA+AGG + chr8.3:81209761-81209780 None:intergenic 35.0%
TATAAGGAATGAGTCGAGTA+GGG - chr8.3:81207751-81207770 MS.gene91781:intron 35.0%
TCAGAATCACAAGACTGAAA+CGG - chr8.3:81206611-81206630 MS.gene91781:CDS 35.0%
TTACTCTTGCACACATAGTT+AGG + chr8.3:81208808-81208827 None:intergenic 35.0%
TTATAAGGAATGAGTCGAGT+AGG - chr8.3:81207750-81207769 MS.gene91781:intron 35.0%
TTGCTTAATTAGGCTAGAGA+AGG - chr8.3:81208065-81208084 MS.gene91781:CDS 35.0%
! ATCACAGAATCAGTCACTTT+CGG - chr8.3:81207464-81207483 MS.gene91781:intron 35.0%
! CTGTATAGTTGTTTCCCTTA+AGG - chr8.3:81209113-81209132 MS.gene91781:intron 35.0%
! GAACGATTCTGATGATGTAT+CGG + chr8.3:81206544-81206563 None:intergenic 35.0%
! GATGCATTTTCCTTTTGTGA+TGG - chr8.3:81209748-81209767 MS.gene91781:CDS 35.0%
! GGATTTTCCGGTTTATGATT+CGG + chr8.3:81206516-81206535 None:intergenic 35.0%
! TGAAAAGTTGAAGCATTCGA+AGG - chr8.3:81210092-81210111 MS.gene91781:CDS 35.0%
! TTGTTGTTGTCATTGTTGAC+TGG + chr8.3:81209697-81209716 None:intergenic 35.0%
!! CAATGTTGCTTTGCATTTCA+TGG + chr8.3:81209489-81209508 None:intergenic 35.0%
!! CATTTTCCTTTTGTGATGGA+TGG - chr8.3:81209752-81209771 MS.gene91781:CDS 35.0%
!! CTTGGCATTCAAGTTTTATC+CGG - chr8.3:81209608-81209627 MS.gene91781:CDS 35.0%
!!! CCAATTTTTTCTCAGCAAGA+GGG + chr8.3:81210041-81210060 None:intergenic 35.0%
!!! TCCAATTTTTTCTCAGCAAG+AGG + chr8.3:81210042-81210061 None:intergenic 35.0%
!!! TGTTGATTCATTTTGATGCG+CGG + chr8.3:81206400-81206419 None:intergenic 35.0%
AAACCAAGGCTACCATAACA+AGG - chr8.3:81208171-81208190 MS.gene91781:intron 40.0%
AAACTGCTTCCTTCATGAGA+CGG + chr8.3:81206065-81206084 None:intergenic 40.0%
AACATCCGAATCACACAAAC+AGG - chr8.3:81209555-81209574 MS.gene91781:CDS 40.0%
AACCGGTATTTAACTGCCAA+TGG + chr8.3:81207226-81207245 None:intergenic 40.0%
AGAACGTTGCCGGAAATATT+CGG + chr8.3:81206487-81206506 None:intergenic 40.0%
AGTTATCGCCGAAAAATCAC+CGG - chr8.3:81206731-81206750 MS.gene91781:CDS 40.0%
AGTTGCCTGTTTGTGTGATT+CGG + chr8.3:81209563-81209582 None:intergenic 40.0%
CAAACTCTTTCAGGAAGTGA+AGG - chr8.3:81207324-81207343 MS.gene91781:intron 40.0%
CACCATTGGCAGTTAAATAC+CGG - chr8.3:81207221-81207240 MS.gene91781:intron 40.0%
CAGCAGCATTAGCAACAAAA+TGG - chr8.3:81209717-81209736 MS.gene91781:CDS 40.0%
CATGCTAATCAAACGACGTT+TGG + chr8.3:81207820-81207839 None:intergenic 40.0%
CCCTCTTGCTGAGAAAAAAT+TGG - chr8.3:81210038-81210057 MS.gene91781:CDS 40.0%
CGGAAATATTCGGAATTTGG+AGG + chr8.3:81206477-81206496 None:intergenic 40.0%
CGTCGTTTGATTAGCATGTT+TGG - chr8.3:81207822-81207841 MS.gene91781:intron 40.0%
CGTTGAACAAACGCTTGAAT+CGG + chr8.3:81206343-81206362 None:intergenic 40.0%
CTTAACTCACTGCGAAACAA+GGG - chr8.3:81207702-81207721 MS.gene91781:intron 40.0%
CTTGTGAACCAATCATCGAA+AGG - chr8.3:81209526-81209545 MS.gene91781:CDS 40.0%
GAAAACTGACACTGCTTACA+AGG - chr8.3:81209888-81209907 MS.gene91781:CDS 40.0%
GACGTGTTTCAGAAACTGTA+CGG + chr8.3:81206284-81206303 None:intergenic 40.0%
GGAACAAGAACTAGATCGAT+TGG - chr8.3:81206632-81206651 MS.gene91781:CDS 40.0%
GGAGATGTTGCAGATTAGTA+GGG - chr8.3:81206902-81206921 MS.gene91781:intron 40.0%
GTCAACAAAGTCAGGAACTT+AGG - chr8.3:81208498-81208517 MS.gene91781:intron 40.0%
GTGTGAAGATTGAGCATGAA+AGG - chr8.3:81208087-81208106 MS.gene91781:CDS 40.0%
GTTTGCTTACTGAGAAAGTG+CGG - chr8.3:81206986-81207005 MS.gene91781:intron 40.0%
TATTCGGAATTTGGAGGAGA+AGG + chr8.3:81206471-81206490 None:intergenic 40.0%
TCTGTGGAAGATATTGGACA+AGG - chr8.3:81210000-81210019 MS.gene91781:CDS 40.0%
TGCCGGAAATATTCGGAATT+TGG + chr8.3:81206480-81206499 None:intergenic 40.0%
TGCTTTGCATTTCATGGTAC+TGG + chr8.3:81209483-81209502 None:intergenic 40.0%
TTAGTAGGGCTCAACTTGAT+CGG - chr8.3:81206916-81206935 MS.gene91781:intron 40.0%
TTGAGTGACCTTTCGATGAT+TGG + chr8.3:81209537-81209556 None:intergenic 40.0%
! AAACTTCTTCCGTTTGGAAC+TGG - chr8.3:81206427-81206446 MS.gene91781:CDS 40.0%
! AACTTCTTCCGTTTGGAACT+GGG - chr8.3:81206428-81206447 MS.gene91781:CDS 40.0%
! AGAAACTGTACGGAGTTTTG+TGG + chr8.3:81206274-81206293 None:intergenic 40.0%
! CTGATGATGTTTCCTGCTTT+AGG - chr8.3:81207560-81207579 MS.gene91781:intron 40.0%
! CTTTCGATGATTGGTTCACA+AGG + chr8.3:81209528-81209547 None:intergenic 40.0%
! GTATCGGATTCTGGATTTTC+CGG + chr8.3:81206528-81206547 None:intergenic 40.0%
! TAACCTTGTTATGGTAGCCT+TGG + chr8.3:81208177-81208196 None:intergenic 40.0%
! TACTGTGTTGATGAAAACGG+CGG + chr8.3:81206205-81206224 None:intergenic 40.0%
! TATTGCCAGGTTGACCTTAA+GGG + chr8.3:81209130-81209149 None:intergenic 40.0%
! TCTGATGATGTATCGGATTC+TGG + chr8.3:81206537-81206556 None:intergenic 40.0%
! TTTGCTTACTGAGAAAGTGC+GGG - chr8.3:81206987-81207006 MS.gene91781:intron 40.0%
!! AAATCACCGGAATTTGTTGC+CGG - chr8.3:81206744-81206763 MS.gene91781:CDS 40.0%
!! ACGGAGTTTTGTGGTTGTTA+CGG + chr8.3:81206265-81206284 None:intergenic 40.0%
!! AGAGAATTTTGAGAAAGCGG+CGG - chr8.3:81206860-81206879 MS.gene91781:intron 40.0%
!! AGCTTGTTGAGCTTTGTCAT+GGG - chr8.3:81208282-81208301 MS.gene91781:intron 40.0%
!! CTTCTGAAACTTCTTCCGTT+TGG - chr8.3:81206421-81206440 MS.gene91781:CDS 40.0%
!! GTTAAATACCGGTTTGATGC+CGG - chr8.3:81207232-81207251 MS.gene91781:intron 40.0%
!! TTTTCCGGTTTATGATTCGG+CGG + chr8.3:81206513-81206532 None:intergenic 40.0%
AATCTACAGACAGGTTTGCC+TGG - chr8.3:81210147-81210166 MS.gene91781:CDS 45.0%
AGAATGTGTGGAAGCTTCAC+CGG + chr8.3:81206318-81206337 None:intergenic 45.0%
AGAGTCCCTAAGACCATTGA+TGG + chr8.3:81208249-81208268 None:intergenic 45.0%
AGGGTGAGTGGATGGATAAT+AGG - chr8.3:81207770-81207789 MS.gene91781:intron 45.0%
AGGTTTGCCTGGAATGTTTC+AGG - chr8.3:81210158-81210177 MS.gene91781:CDS 45.0%
ATTAACTGTCGTTGCTGCAC+AGG + chr8.3:81209311-81209330 None:intergenic 45.0%
CACTAGGTGTGGTGTATGAA+TGG - chr8.3:81208878-81208897 MS.gene91781:intron 45.0%
CAGCGAGTTCTGCGAAATTA+CGG - chr8.3:81208906-81208925 MS.gene91781:intron 45.0%
CGAGGAGGTGAATGAAGAAA+AGG - chr8.3:81206791-81206810 MS.gene91781:intron 45.0%
CGGAGATGTTGCAGATTAGT+AGG - chr8.3:81206901-81206920 MS.gene91781:intron 45.0%
CGGTATTTAACTGCCAATGG+TGG + chr8.3:81207223-81207242 None:intergenic 45.0%
CTGCAGAGTGAAGAATGCAA+GGG - chr8.3:81208122-81208141 MS.gene91781:CDS 45.0%
CTTGAATCGGAGAGAATGTG+TGG + chr8.3:81206330-81206349 None:intergenic 45.0%
GAGCAACACTGAGTCTGAAT+TGG + chr8.3:81208647-81208666 None:intergenic 45.0%
GCAGGAAACATCATCAGCAA+AGG + chr8.3:81207557-81207576 None:intergenic 45.0%
GCTTAACTCACTGCGAAACA+AGG - chr8.3:81207701-81207720 MS.gene91781:intron 45.0%
GGAAGATATTGGACAAGGCT+TGG - chr8.3:81210005-81210024 MS.gene91781:CDS 45.0%
GTCAATGCCTGAAACATTCC+AGG + chr8.3:81210168-81210187 None:intergenic 45.0%
TAGAATCAGCTCTGTCAGCT+TGG - chr8.3:81209590-81209609 MS.gene91781:CDS 45.0%
TCAACCGCCGAATCATAAAC+CGG - chr8.3:81206506-81206525 MS.gene91781:CDS 45.0%
TCTGCAGAGTGAAGAATGCA+AGG - chr8.3:81208121-81208140 MS.gene91781:CDS 45.0%
TGACAAAGCTCAACAAGCTG+AGG + chr8.3:81208281-81208300 None:intergenic 45.0%
TGAGCAAAGTGAGCTCAACT+TGG - chr8.3:81207188-81207207 MS.gene91781:intron 45.0%
TGTGCAGCAACGACAGTTAA+TGG - chr8.3:81209310-81209329 MS.gene91781:CDS 45.0%
TGTTTCCCTTAAGGTCAACC+TGG - chr8.3:81209122-81209141 MS.gene91781:intron 45.0%
! ACTGTGTTGATGAAAACGGC+GGG + chr8.3:81206204-81206223 None:intergenic 45.0%
! AGCTGCCATCAATGGTCTTA+GGG - chr8.3:81208241-81208260 MS.gene91781:intron 45.0%
! CTATTGCCAGGTTGACCTTA+AGG + chr8.3:81209131-81209150 None:intergenic 45.0%
! GAAGCATTCGAAGGCTATTG+AGG - chr8.3:81210101-81210120 MS.gene91781:CDS 45.0%
! GAAGCTTCACCGGAATTTTC+CGG + chr8.3:81206308-81206327 None:intergenic 45.0%
! TGTTTTCCCATGCCAAAAGC+CGG + chr8.3:81207306-81207325 None:intergenic 45.0%
!! CAGCTTGTTGAGCTTTGTCA+TGG - chr8.3:81208281-81208300 MS.gene91781:intron 45.0%
!! GAGTTTTGTGGTTGTTACGG+TGG + chr8.3:81206262-81206281 None:intergenic 45.0%
!! GATTCATTTTGATGCGCGGT+TGG + chr8.3:81206396-81206415 None:intergenic 45.0%
!! TTTGATGCCGGTTCACTTGA+AGG - chr8.3:81207244-81207263 MS.gene91781:intron 45.0%
!! TTTAATCATATATTTAAATT+GGG - chr8.3:81208410-81208429 MS.gene91781:intron 5.0%
!!! TTTTAATCATATATTTAAAT+TGG - chr8.3:81208409-81208428 MS.gene91781:intron 5.0%
AAACGGAACGTGAGGAGGTT+CGG - chr8.3:81206655-81206674 MS.gene91781:CDS 50.0%
AAAGAGCCTCTGCTCCACTT+TGG - chr8.3:81207279-81207298 MS.gene91781:intron 50.0%
AAAGTGGAGCAGAGGCTCTT+TGG + chr8.3:81207280-81207299 None:intergenic 50.0%
AACACGTCGCCGGAAAATTC+CGG - chr8.3:81206296-81206315 MS.gene91781:CDS 50.0%
AATGAGTCGAGTAGGGTGAG+TGG - chr8.3:81207758-81207777 MS.gene91781:intron 50.0%
ACTACCTCAGCTGCCATCAA+TGG - chr8.3:81208233-81208252 MS.gene91781:intron 50.0%
ATTGGAAACGGAACGTGAGG+AGG - chr8.3:81206650-81206669 MS.gene91781:CDS 50.0%
CAAGTGAACCGGCATCAAAC+CGG + chr8.3:81207243-81207262 None:intergenic 50.0%
CAGAGTGAAGAATGCAAGGG+AGG - chr8.3:81208125-81208144 MS.gene91781:CDS 50.0%
CAGCTGCCATCAATGGTCTT+AGG - chr8.3:81208240-81208259 MS.gene91781:intron 50.0%
CAGTTCGGAAACTCGCTTCT+CGG + chr8.3:81206366-81206385 None:intergenic 50.0%
CATCTCCGATAACCGATCTC+CGG + chr8.3:81206889-81206908 None:intergenic 50.0%
GAATTTGGAGGAGAAGGAGG+AGG + chr8.3:81206465-81206484 None:intergenic 50.0%
GCGGTTGGAATGAACCAGTT+CGG + chr8.3:81206381-81206400 None:intergenic 50.0%
TCGACAACGAAGAAACGGTG+CGG - chr8.3:81206022-81206041 MS.gene91781:CDS 50.0%
TCGATTGGAAACGGAACGTG+AGG - chr8.3:81206647-81206666 MS.gene91781:CDS 50.0%
TCGGAATTTGGAGGAGAAGG+AGG + chr8.3:81206468-81206487 None:intergenic 50.0%
TGTAACTCTCTTCGCCTCAC+CGG - chr8.3:81206123-81206142 MS.gene91781:CDS 50.0%
TTGGACCTCAAAGCCACCAT+TGG - chr8.3:81207207-81207226 MS.gene91781:intron 50.0%
TTTGTGGTTGTTACGGTGGC+TGG + chr8.3:81206258-81206277 None:intergenic 50.0%
! AACTGCCAATGGTGGCTTTG+AGG + chr8.3:81207215-81207234 None:intergenic 50.0%
! AAGACCATTGATGGCAGCTG+AGG + chr8.3:81208240-81208259 None:intergenic 50.0%
! AAGCGACAGTGTCTGGAACA+CGG + chr8.3:81209792-81209811 None:intergenic 50.0%
! AGTGTCTGGAACACGGTCAA+GGG + chr8.3:81209785-81209804 None:intergenic 50.0%
! TGTTCCAGACACTGTCGCTT+CGG - chr8.3:81209792-81209811 MS.gene91781:CDS 50.0%
!! AGGAGGTTCGGTGTAGTGAT+TGG - chr8.3:81206667-81206686 MS.gene91781:CDS 50.0%
!! CAGTTTCTGAAACACGTCGC+CGG - chr8.3:81206286-81206305 MS.gene91781:CDS 50.0%
!! GAATTTTGAGAAAGCGGCGG+TGG - chr8.3:81206863-81206882 MS.gene91781:intron 50.0%
!! GGAGGTTCGGTGTAGTGATT+GGG - chr8.3:81206668-81206687 MS.gene91781:CDS 50.0%
!! TTTGGACCGGCTTTTGGCAT+GGG - chr8.3:81207297-81207316 MS.gene91781:intron 50.0%
ACAACGAAGAAACGGTGCGG+CGG - chr8.3:81206025-81206044 MS.gene91781:CDS 55.0%
ACCTCCTCGTCTTTCCTCAC+CGG + chr8.3:81206780-81206799 None:intergenic 55.0%
AGTCGAGTAGGGTGAGTGGA+TGG - chr8.3:81207762-81207781 MS.gene91781:intron 55.0%
CGAGAAGCGAGTTTCCGAAC+TGG - chr8.3:81206364-81206383 MS.gene91781:CDS 55.0%
CTGCTTCCTTCATGAGACGG+CGG + chr8.3:81206062-81206081 None:intergenic 55.0%
GAAAACGGCGGGAATGTCGT+CGG + chr8.3:81206193-81206212 None:intergenic 55.0%
TCACCGCCGGCAACAAATTC+CGG + chr8.3:81206753-81206772 None:intergenic 55.0%
TGCCAAAAGCCGGTCCAAAG+TGG + chr8.3:81207296-81207315 None:intergenic 55.0%
! CAGTGTCTGGAACACGGTCA+AGG + chr8.3:81209786-81209805 None:intergenic 55.0%
!! CTCCACTTTGGACCGGCTTT+TGG - chr8.3:81207291-81207310 MS.gene91781:intron 55.0%
!! CTTTGGACCGGCTTTTGGCA+TGG - chr8.3:81207296-81207315 MS.gene91781:intron 55.0%
!! GGTTCGGTGTAGTGATTGGG+AGG - chr8.3:81206671-81206690 MS.gene91781:CDS 55.0%
!! TCACCGGAATTTGTTGCCGG+CGG - chr8.3:81206747-81206766 MS.gene91781:CDS 55.0%
!! TGCCGGTTCACTTGAAGGAC+CGG - chr8.3:81207249-81207268 MS.gene91781:intron 55.0%
ATGTCGTCGGAGACAGCGAG+AGG + chr8.3:81206180-81206199 None:intergenic 60.0%
GCCCGGTCCTTCAAGTGAAC+CGG + chr8.3:81207254-81207273 None:intergenic 60.0%
GCCTCTGCTCCACTTTGGAC+CGG - chr8.3:81207284-81207303 MS.gene91781:intron 60.0%
GCTTCCGAAGCGACAGTGTC+TGG + chr8.3:81209799-81209818 None:intergenic 60.0%
GGAGACAGCGAGAGGTTCAC+CGG + chr8.3:81206172-81206191 None:intergenic 60.0%
GGTGGCCGGAGATCGGTTAT+CGG - chr8.3:81206881-81206900 MS.gene91781:intron 60.0%
GGTTCACTTGAAGGACCGGG+CGG - chr8.3:81207253-81207272 MS.gene91781:intron 60.0%
GGTTCCGGTGAGGAAAGACG+AGG - chr8.3:81206773-81206792 MS.gene91781:CDS 60.0%
GTTGTTACGGTGGCTGGACG+AGG + chr8.3:81206252-81206271 None:intergenic 60.0%
TCCGGTGAGGAAAGACGAGG+AGG - chr8.3:81206776-81206795 MS.gene91781:CDS 60.0%
TCGGCGGTTGAGAACGTTGC+CGG + chr8.3:81206497-81206516 None:intergenic 60.0%
TTACGCTCGCCACTACCTCG+CGG - chr8.3:81206083-81206102 MS.gene91781:CDS 60.0%
TTTGAGAAAGCGGCGGTGGC+CGG - chr8.3:81206867-81206886 MS.gene91781:intron 60.0%
! GAAGGTGGAGAGTGCGGAAC+CGG + chr8.3:81206145-81206164 None:intergenic 60.0%
! GCCGGTTCACTTGAAGGACC+GGG - chr8.3:81207250-81207269 MS.gene91781:intron 60.0%
!! GGAATTTGTTGCCGGCGGTG+AGG - chr8.3:81206752-81206771 MS.gene91781:CDS 60.0%
CAGAGGCTCTTTGGACCGCC+CGG + chr8.3:81207271-81207290 None:intergenic 65.0%
GACAGCGAGAGGTTCACCGG+CGG + chr8.3:81206169-81206188 None:intergenic 65.0%
GCCGGTCCAAAGTGGAGCAG+AGG + chr8.3:81207288-81207307 None:intergenic 65.0%
GTTACGGTGGCTGGACGAGG+AGG + chr8.3:81206249-81206268 None:intergenic 65.0%
TGTTGCCGGCGGTGAGGTTC+CGG - chr8.3:81206758-81206777 MS.gene91781:CDS 65.0%
! TGGAGAGTGCGGAACCGGTG+AGG + chr8.3:81206140-81206159 None:intergenic 65.0%
!! AGAGCGCCGCCGTCTCATGA+AGG - chr8.3:81206053-81206072 MS.gene91781:CDS 65.0%
AAGCGGCGGTGGCCGGAGAT+CGG - chr8.3:81206874-81206893 MS.gene91781:intron 70.0%
AATCAGAGTGCGCCGCCGCG+AGG + chr8.3:81206101-81206120 None:intergenic 70.0%
ACGGTGGCTGGACGAGGAGG+TGG + chr8.3:81206246-81206265 None:intergenic 70.0%
AGGTTCACCGGCGGCGAAGG+TGG + chr8.3:81206160-81206179 None:intergenic 70.0%
CCTCACCGGAACCTCACCGC+CGG + chr8.3:81206766-81206785 None:intergenic 70.0%
GAGAGGTTCACCGGCGGCGA+AGG + chr8.3:81206163-81206182 None:intergenic 70.0%
GCACTCTCCACCTTCGCCGC+CGG - chr8.3:81206150-81206169 MS.gene91781:CDS 70.0%
GGCGGCGAAGGTGGAGAGTG+CGG + chr8.3:81206151-81206170 None:intergenic 70.0%
GTGGCTGGACGAGGAGGTGG+CGG + chr8.3:81206243-81206262 None:intergenic 70.0%
AGTGCGCCGCCGCGAGGTAG+TGG + chr8.3:81206095-81206114 None:intergenic 75.0%
CCGGCGGTGAGGTTCCGGTG+AGG - chr8.3:81206763-81206782 MS.gene91781:CDS 75.0%
CGCTCGCCACTACCTCGCGG+CGG - chr8.3:81206086-81206105 MS.gene91781:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 81206000 81210254 81206000 ID=MS.gene91781
chr8.3 mRNA 81206000 81210254 81206000 ID=MS.gene91781.t1;Parent=MS.gene91781
chr8.3 exon 81209297 81210254 81209297 ID=MS.gene91781.t1.exon1;Parent=MS.gene91781.t1
chr8.3 CDS 81209297 81210254 81209297 ID=cds.MS.gene91781.t1;Parent=MS.gene91781.t1
chr8.3 exon 81208909 81209093 81208909 ID=MS.gene91781.t1.exon2;Parent=MS.gene91781.t1
chr8.3 CDS 81208909 81209093 81208909 ID=cds.MS.gene91781.t1;Parent=MS.gene91781.t1
chr8.3 exon 81207951 81208177 81207951 ID=MS.gene91781.t1.exon3;Parent=MS.gene91781.t1
chr8.3 CDS 81207951 81208177 81207951 ID=cds.MS.gene91781.t1;Parent=MS.gene91781.t1
chr8.3 exon 81206000 81206801 81206000 ID=MS.gene91781.t1.exon4;Parent=MS.gene91781.t1
chr8.3 CDS 81206000 81206801 81206000 ID=cds.MS.gene91781.t1;Parent=MS.gene91781.t1
Gene Sequence

>MS.gene91781

ATGGGTTGCACGGCGTCTAAACTCGACAACGAAGAAACGGTGCGGCGGTGCAAAGAGCGCCGCCGTCTCATGAAGGAAGCAGTTTACGCTCGCCACTACCTCGCGGCGGCGCACTCTGATTACTGTAACTCTCTTCGCCTCACCGGTTCCGCACTCTCCACCTTCGCCGCCGGTGAACCTCTCGCTGTCTCCGACGACATTCCCGCCGTTTTCATCAACACAGTAAAAACTCGTCAGACACCGCCACCTCCTCGTCCAGCCACCGTAACAACCACAAAACTCCGTACAGTTTCTGAAACACGTCGCCGGAAAATTCCGGTGAAGCTTCCACACATTCTCTCCGATTCAAGCGTTTGTTCAACGCCGAGAAGCGAGTTTCCGAACTGGTTCATTCCAACCGCGCATCAAAATGAATCAACAGCTTCTGAAACTTCTTCCGTTTGGAACTGGGAGAATTTTCATCCTCCTCCTTCTCCTCCAAATTCCGAATATTTCCGGCAACGTTCTCAACCGCCGAATCATAAACCGGAAAATCCAGAATCCGATACATCATCAGAATCGTTCTACAACATGTTCCACTCGAAAATTCATCTTCATAATCAAAATCAGAATCAGAATCACAAGACTGAAACGGAACAAGAACTAGATCGATTGGAAACGGAACGTGAGGAGGTTCGGTGTAGTGATTGGGAGGATTGCTACAGTTCAACAAGCTCATCAGATAGAGATGAAGTTATCGCCGAAAAATCACCGGAATTTGTTGCCGGCGGTGAGGTTCCGGTGAGGAAAGACGAGGAGGTGAATGAAGAAAAGGTGAAGATGAAGCATAAGGATTTGAAAGAGATAGTTGAAGTGATAAGAGAGAATTTTGAGAAAGCGGCGGTGGCCGGAGATCGGTTATCGGAGATGTTGCAGATTAGTAGGGCTCAACTTGATCGGAGTTTCAGTCAATTGAAAAGTAAGATTTATATTTTGAAAAGTAAGATGTTTGCTTACTGAGAAAGTGCGGGAAAATTTTATTAATCTCAATTTAAATTTATATGTGATTAAGCTTAAGCTTAATTTAGATTTATATCTGAAGAAATTGGATTTAATGTTTTTCGTTATGGAAAATATTAATTTTTGCTTAATTGAAAAATGATCATTTTGAATTGAATGCAGAAATAGTGTATCACTCTAGTAATATACTGAGCAAAGTGAGCTCAACTTGGACCTCAAAGCCACCATTGGCAGTTAAATACCGGTTTGATGCCGGTTCACTTGAAGGACCGGGCGGTCCAAAGAGCCTCTGCTCCACTTTGGACCGGCTTTTGGCATGGGAAAACAAACTCTTTCAGGAAGTGAAGGTAAGTTTTTGTTTTCGTCATTAACTCAATCAATATTGAATTTATATTTTAATTTTTTGAACAATGTAAAGGTCTTCTAGGGGTAGTGTAGTAATAATTGATGGTATCTTGACTTTAAATCACAGAATCAGTCACTTTCGGTGCATTGTTTAATTTGTCTGTAAACACTTCTTCATTGTTTTCTTACGATAAATTTTCATGTTGAGGACCTTTGCTGATGATGTTTCCTGCTTTAGGTGTTTTAGTGTTTAGAGTTCAAAAAAATTAAGTAGATTTTGTGCTTGTTTGATTTCATAATTTTGTCGAGGTTACAAAGTGTAGCTTTTGCAAAATTACAGTGATTTGCCGTGATTTTGCTTAACTCACTGCGAAACAAGGGAAACACTATATGATTCAATTTCGAGTTATAAGGAATGAGTCGAGTAGGGTGAGTGGATGGATAATAGGTAACTAAATGCACGTTCAAATACACCAAACGTCGTTTGATTAGCATGTTTGGATGCATTTTATCAAAATCAAATTTGTTTTGAAAAGCAAGTTTTTATTGAAATTGATAAAAATTAATTAACTTAGACTACACTTTTTGCCAAAAAAGTCACTTCCTTTTTAATTCAACCTAAACTAATATCAACTTGCAAACTCATAACCCTTCACAAATTAACTCTAAATACTCATCTAAATTAGGATGTTATGTGTGCACTAATGATGCTTTTGCTTAATTGCTTAATTAGGCTAGAGAAGGTGTGAAGATTGAGCATGAAAGGAAATTGTCAACTCTGCAGAGTGAAGAATGCAAGGGAGGTGATGACGAAACAAAGATAGACAAAACCAAGGCTACCATAACAAGGTTACAGTCACTAATTATTGTAACATCTCAGGCTGTGTCTACTACCTCAGCTGCCATCAATGGTCTTAGGGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTTTGTCATGGGTATGTCTCTCTATTCTACTATTGGTCCCTCTCTGAACTTAGATATAAGTAAACAAGTACATTTATCTTATTCACATATGAGCTGGATACATCATACATGTACTTTTTTAATCATATATTTAAATTGGGGGTAGTATTTGCACAATGTATGAAAGGACAGTGAAACAGTTATCATTTTCTAGTAAAATGAGATAGTCAACAAAGTCAGGAACTTAGGACAGTGTGTTTGATATTCAATCAAGGCAATCAAAGCATATATGTACACATTCAATTGCTATTCGTACTTTCATTGGGCCACCAAAATTTTGAAATAGTATTTGAGAAAATATGGAGTCTTCTGCCAATTCAGACTCAGTGTTGCTCTTATACTATATGTTTCACTTTTTTATGAATTCAATGAAACATTTGAGAGTTAATTCTCAATGGAATGTGCTGCTTCCCGTATTGCCATAATACAGTAGAATCAAGTTGTGGCTTGCATATATTAAAATTCTTATTACTCCTAACTATGTGTGCAAGAGTAATCTAGATTCTCGATAGTTATAAGTTAGTACTCCTGAAGTTATTTTTTGTTCACTAGGTGTGGTGTATGAATGGAATTACAGCGAGTTCTGCGAAATTACGGTTACATTATGATTTTGTTGAAGCTCTGTGTAGTATCAAAACATTGTCATTTAAAAATGTTACACCCCATTTGAGCAAACCATTTTATTTGTTGACAGTTACTTACTATACTATTGAACTGTTTGAGATGAGCTATAAATTCAGTGAAAATAAAAATGTTGCTCTTATTGTCACTATTATCCATTCTGTATAGTTGTTTCCCTTAAGGTCAACCTGGCAATAGTATATGAAATTGGAAAATTATAATGGAACATAGTAGCATATTTCTTGGTAAAGCATCTTTGGTTGCAGTTGATCTTGCCCTTACAATTCAAATTTCAATATAAACTTGATAATCATAAAGGAAGATATAGACTCCATATATATACTAGTATTGAGAACCTGTGCAGCAACGACAGTTAATGGTAAATTAGAGTATTGCATTAAACCTACATTATTGTTGTGCATCAATTGTTAAGTTATTTGAGTTAAATATAGAGTTGTCTCTCAGATTGTTCTCTTATGTTTGTGACATGCCAAACATAGAATCATTCACATGTGGAGATCAATGCACCAGTACCATGAAATGCAAAGCAACATTGTACAGCAAGTTTGTGGCCTTGTGAACCAATCATCGAAAGGTCACTCAACATCCGAATCACACAAACAGGCAACTCGAGATCTAGAATCAGCTCTGTCAGCTTGGCATTCAAGTTTTATCCGGATCATAAAATTTCAAAGAGACTTTATTTTGTCACTACATGGTTGGTTTAAGCTGAATCTTATTCCAGTCAACAATGACAACAACAACAGCAGCATTAGCAACAAAATGGAACCATCTGATGCATTTTCCTTTTGTGATGGATGGAAACTAGCCCTTGACCGTGTTCCAGACACTGTCGCTTCGGAAGCAATCAAAAGCTTCATCAATGTTGTCCACGTAATATCAGTTAAGCAATGTCAAGAACTCAAGATTAAAAGGAAAACTGACACTGCTTACAAGGAACTTGAGAAAAAATCTTCATCTCTAAAAAACATAGAAAAGAAGTTTTACAACTCATATTCTATGGTTGGTATTGGAATAATTCCAAACTCTGTGGAAGATATTGGACAAGGCTTGGATGCAAGAGACCCTCTTGCTGAGAAAAAATTGGAACTTGAAGCTTGTCAAAGACGTGTCGACGATGAAAAGTTGAAGCATTCGAAGGCTATTGAGGTTACAAGAGCTATGACACTTAATAATCTACAGACAGGTTTGCCTGGAATGTTTCAGGCATTGACAAGTTTTTCTTCATTGTTCATTGAAGCTCTTGAATCAGTATGTGACCGTTCATATGCCATAAAGTAG

Protein sequence

>MS.gene91781.t1

MGCTASKLDNEETVRRCKERRRLMKEAVYARHYLAAAHSDYCNSLRLTGSALSTFAAGEPLAVSDDIPAVFINTVKTRQTPPPPRPATVTTTKLRTVSETRRRKIPVKLPHILSDSSVCSTPRSEFPNWFIPTAHQNESTASETSSVWNWENFHPPPSPPNSEYFRQRSQPPNHKPENPESDTSSESFYNMFHSKIHLHNQNQNQNHKTETEQELDRLETEREEVRCSDWEDCYSSTSSSDRDEVIAEKSPEFVAGGEVPVRKDEEVNEEKVKMKHKDLKEIVEVIRENFEKAAVAGDRLSEMLQISRAQLDRSFSQLKKIVYHSSNILSKVSSTWTSKPPLAVKYRFDAGSLEGPGGPKSLCSTLDRLLAWENKLFQEVKAREGVKIEHERKLSTLQSEECKGGDDETKIDKTKATITRLQSLIIVTSQAVSTTSAAINGLRDSDLVPQLVELCHGIIHMWRSMHQYHEMQSNIVQQVCGLVNQSSKGHSTSESHKQATRDLESALSAWHSSFIRIIKFQRDFILSLHGWFKLNLIPVNNDNNNSSISNKMEPSDAFSFCDGWKLALDRVPDTVASEAIKSFINVVHVISVKQCQELKIKRKTDTAYKELEKKSSSLKNIEKKFYNSYSMVGIGIIPNSVEDIGQGLDARDPLAEKKLELEACQRRVDDEKLKHSKAIEVTRAMTLNNLQTGLPGMFQALTSFSSLFIEALESVCDRSYAIK