Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91781.t1 | XP_013443816.1 | 92.3 | 729 | 44 | 3 | 1 | 723 | 1 | 723 | 0.00E+00 | 1265.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91781.t1 | Q93YU8 | 56.4 | 802 | 265 | 11 | 1 | 723 | 1 | 796 | 6.6e-208 | 725.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91781.t1 | A0A072TKX3 | 92.3 | 729 | 44 | 3 | 1 | 723 | 1 | 723 | 0.0e+00 | 1265.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049250 | MS.gene91781 | 0.801622 | 8.26E-49 | -1.69E-46 |
MS.gene050338 | MS.gene91781 | 0.829325 | 5.48E-55 | -1.69E-46 |
MS.gene05054 | MS.gene91781 | 0.807324 | 5.34E-50 | -1.69E-46 |
MS.gene050875 | MS.gene91781 | 0.805708 | 1.17E-49 | -1.69E-46 |
MS.gene051914 | MS.gene91781 | 0.815313 | 9.86E-52 | -1.69E-46 |
MS.gene052143 | MS.gene91781 | 0.826039 | 3.38E-54 | -1.69E-46 |
MS.gene052308 | MS.gene91781 | 0.831329 | 1.78E-55 | -1.69E-46 |
MS.gene052367 | MS.gene91781 | 0.81055 | 1.09E-50 | -1.69E-46 |
MS.gene053173 | MS.gene91781 | 0.828242 | 1.00E-54 | -1.69E-46 |
MS.gene053348 | MS.gene91781 | 0.848874 | 4.64E-60 | -1.69E-46 |
MS.gene054551 | MS.gene91781 | 0.83844 | 2.87E-57 | -1.69E-46 |
MS.gene054593 | MS.gene91781 | 0.843378 | 1.45E-58 | -1.69E-46 |
MS.gene054614 | MS.gene91781 | 0.824822 | 6.55E-54 | -1.69E-46 |
MS.gene054633 | MS.gene91781 | 0.837581 | 4.78E-57 | -1.69E-46 |
MS.gene054941 | MS.gene91781 | 0.821745 | 3.43E-53 | -1.69E-46 |
MS.gene054999 | MS.gene91781 | 0.816459 | 5.47E-52 | -1.69E-46 |
MS.gene055251 | MS.gene91781 | 0.818635 | 1.77E-52 | -1.69E-46 |
MS.gene055308 | MS.gene91781 | 0.813353 | 2.67E-51 | -1.69E-46 |
MS.gene055381 | MS.gene91781 | 0.807769 | 4.30E-50 | -1.69E-46 |
MS.gene055382 | MS.gene91781 | 0.816812 | 4.56E-52 | -1.69E-46 |
MS.gene055578 | MS.gene91781 | 0.806882 | 6.63E-50 | -1.69E-46 |
MS.gene055579 | MS.gene91781 | 0.800139 | 1.66E-48 | -1.69E-46 |
MS.gene056041 | MS.gene91781 | 0.821728 | 3.46E-53 | -1.69E-46 |
MS.gene056266 | MS.gene91781 | -0.816852 | 4.47E-52 | -1.69E-46 |
MS.gene05640 | MS.gene91781 | 0.83213 | 1.13E-55 | -1.69E-46 |
MS.gene056526 | MS.gene91781 | 0.843062 | 1.77E-58 | -1.69E-46 |
MS.gene056528 | MS.gene91781 | 0.81952 | 1.11E-52 | -1.69E-46 |
MS.gene05652 | MS.gene91781 | 0.817198 | 3.73E-52 | -1.69E-46 |
MS.gene058128 | MS.gene91781 | 0.808814 | 2.57E-50 | -1.69E-46 |
MS.gene058827 | MS.gene91781 | 0.825115 | 5.59E-54 | -1.69E-46 |
MS.gene058828 | MS.gene91781 | 0.813723 | 2.22E-51 | -1.69E-46 |
MS.gene058853 | MS.gene91781 | 0.870996 | 9.57E-67 | -1.69E-46 |
MS.gene05926 | MS.gene91781 | 0.820996 | 5.10E-53 | -1.69E-46 |
MS.gene059553 | MS.gene91781 | 0.821412 | 4.09E-53 | -1.69E-46 |
MS.gene060473 | MS.gene91781 | 0.827791 | 1.29E-54 | -1.69E-46 |
MS.gene060565 | MS.gene91781 | 0.825056 | 5.77E-54 | -1.69E-46 |
MS.gene06093 | MS.gene91781 | 0.835965 | 1.23E-56 | -1.69E-46 |
MS.gene061044 | MS.gene91781 | 0.827136 | 1.85E-54 | -1.69E-46 |
MS.gene061099 | MS.gene91781 | 0.82399 | 1.03E-53 | -1.69E-46 |
MS.gene061260 | MS.gene91781 | 0.821525 | 3.86E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91781.t1 | MTR_8g006850 | 94.925 | 729 | 25 | 3 | 1 | 723 | 1 | 723 | 0.0 | 1374 |
MS.gene91781.t1 | MTR_7g081705 | 68.620 | 529 | 126 | 7 | 227 | 723 | 323 | 843 | 0.0 | 702 |
MS.gene91781.t1 | MTR_5g022530 | 39.341 | 455 | 241 | 9 | 277 | 719 | 204 | 635 | 9.50e-93 | 302 |
MS.gene91781.t1 | MTR_5g022530 | 55.932 | 59 | 26 | 0 | 1 | 59 | 1 | 59 | 1.15e-11 | 68.6 |
MS.gene91781.t1 | MTR_2g048360 | 31.195 | 452 | 276 | 8 | 277 | 719 | 208 | 633 | 8.16e-52 | 191 |
MS.gene91781.t1 | MTR_3g109450 | 28.889 | 450 | 281 | 11 | 279 | 715 | 277 | 700 | 1.92e-51 | 191 |
MS.gene91781.t1 | MTR_2g102050 | 28.733 | 442 | 298 | 9 | 269 | 705 | 309 | 738 | 2.35e-48 | 182 |
MS.gene91781.t1 | MTR_2g102050 | 57.627 | 59 | 25 | 0 | 1 | 59 | 1 | 59 | 2.37e-14 | 77.4 |
MS.gene91781.t1 | MTR_3g088190 | 26.306 | 536 | 355 | 9 | 213 | 715 | 371 | 899 | 6.54e-44 | 170 |
MS.gene91781.t1 | MTR_4g012430 | 31.785 | 409 | 249 | 11 | 270 | 672 | 119 | 503 | 5.04e-43 | 163 |
MS.gene91781.t1 | MTR_1g112850 | 28.027 | 446 | 294 | 9 | 277 | 705 | 274 | 709 | 3.83e-41 | 161 |
MS.gene91781.t1 | MTR_1g021280 | 78.095 | 105 | 18 | 2 | 34 | 138 | 32 | 131 | 6.97e-39 | 140 |
MS.gene91781.t1 | MTR_5g098980 | 24.208 | 442 | 280 | 11 | 281 | 711 | 358 | 755 | 1.76e-26 | 115 |
MS.gene91781.t1 | MTR_4g127620 | 26.765 | 340 | 228 | 7 | 272 | 597 | 330 | 662 | 5.87e-26 | 114 |
MS.gene91781.t1 | MTR_3g115120 | 25.828 | 453 | 256 | 12 | 277 | 706 | 275 | 670 | 8.41e-26 | 113 |
MS.gene91781.t1 | MTR_5g087740 | 33.621 | 232 | 137 | 5 | 361 | 583 | 429 | 652 | 4.48e-25 | 111 |
MS.gene91781.t1 | MTR_3g096950 | 27.536 | 345 | 236 | 6 | 362 | 705 | 433 | 764 | 1.09e-24 | 110 |
MS.gene91781.t1 | MTR_8g091250 | 29.433 | 282 | 182 | 8 | 337 | 607 | 353 | 628 | 2.22e-23 | 105 |
MS.gene91781.t1 | MTR_3g078830 | 32.751 | 229 | 147 | 3 | 361 | 585 | 445 | 670 | 2.95e-23 | 105 |
MS.gene91781.t1 | MTR_2g036920 | 38.547 | 179 | 98 | 4 | 364 | 532 | 570 | 746 | 3.04e-23 | 105 |
MS.gene91781.t1 | MTR_2g036920 | 38.547 | 179 | 98 | 4 | 364 | 532 | 599 | 775 | 3.16e-23 | 105 |
MS.gene91781.t1 | MTR_8g015290 | 71.287 | 101 | 21 | 3 | 31 | 128 | 27 | 122 | 7.40e-21 | 95.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91781.t1 | AT1G02110 | 57.276 | 749 | 246 | 17 | 1 | 722 | 1 | 702 | 0.0 | 794 |
MS.gene91781.t1 | AT3G60320 | 55.886 | 807 | 261 | 16 | 1 | 723 | 1 | 796 | 0.0 | 769 |
MS.gene91781.t1 | AT3G51290 | 40.889 | 450 | 241 | 9 | 277 | 722 | 200 | 628 | 1.62e-95 | 310 |
MS.gene91781.t1 | AT3G51290 | 41.111 | 450 | 240 | 9 | 277 | 722 | 200 | 628 | 1.64e-93 | 308 |
MS.gene91781.t1 | AT3G51290 | 40.444 | 450 | 237 | 10 | 277 | 722 | 200 | 622 | 8.77e-90 | 294 |
MS.gene91781.t1 | AT2G34670 | 34.605 | 367 | 223 | 6 | 350 | 715 | 324 | 674 | 7.12e-61 | 217 |
MS.gene91781.t1 | AT1G52320 | 29.314 | 423 | 278 | 9 | 288 | 705 | 34 | 440 | 1.29e-50 | 184 |
MS.gene91781.t1 | AT1G52320 | 29.314 | 423 | 278 | 9 | 288 | 705 | 34 | 440 | 1.29e-50 | 184 |
MS.gene91781.t1 | AT1G52320 | 29.314 | 423 | 278 | 9 | 288 | 705 | 337 | 743 | 1.02e-49 | 187 |
MS.gene91781.t1 | AT1G52320 | 29.314 | 423 | 278 | 9 | 288 | 705 | 360 | 766 | 1.71e-49 | 186 |
MS.gene91781.t1 | AT1G52320 | 29.314 | 423 | 278 | 9 | 288 | 705 | 360 | 766 | 1.71e-49 | 186 |
MS.gene91781.t1 | AT1G21740 | 28.667 | 450 | 305 | 8 | 277 | 715 | 497 | 941 | 4.27e-45 | 174 |
MS.gene91781.t1 | AT1G77500 | 27.655 | 452 | 284 | 9 | 277 | 715 | 449 | 870 | 1.50e-39 | 157 |
MS.gene91781.t1 | AT2G34670 | 33.628 | 226 | 142 | 4 | 350 | 575 | 324 | 541 | 2.24e-32 | 133 |
MS.gene91781.t1 | AT4G35240 | 24.777 | 448 | 297 | 7 | 277 | 719 | 419 | 831 | 4.44e-29 | 124 |
MS.gene91781.t1 | AT4G35240 | 24.777 | 448 | 297 | 7 | 277 | 719 | 419 | 831 | 4.44e-29 | 124 |
MS.gene91781.t1 | AT4G35240 | 24.777 | 448 | 297 | 7 | 277 | 719 | 419 | 831 | 6.61e-29 | 124 |
MS.gene91781.t1 | AT4G35240 | 24.777 | 448 | 297 | 7 | 277 | 719 | 419 | 831 | 6.61e-29 | 124 |
MS.gene91781.t1 | AT2G17110 | 28.691 | 359 | 234 | 9 | 246 | 589 | 279 | 630 | 1.71e-28 | 122 |
MS.gene91781.t1 | AT2G27090 | 33.621 | 232 | 144 | 6 | 361 | 587 | 425 | 651 | 8.53e-25 | 110 |
MS.gene91781.t1 | AT2G27090 | 33.621 | 232 | 144 | 6 | 361 | 587 | 425 | 651 | 8.53e-25 | 110 |
MS.gene91781.t1 | AT5G54480 | 26.178 | 382 | 233 | 10 | 258 | 621 | 294 | 644 | 1.97e-23 | 106 |
MS.gene91781.t1 | AT1G20530 | 26.546 | 388 | 246 | 10 | 278 | 649 | 232 | 596 | 2.58e-23 | 105 |
MS.gene91781.t1 | AT4G30130 | 31.429 | 245 | 153 | 5 | 364 | 597 | 401 | 641 | 6.77e-22 | 101 |
MS.gene91781.t1 | AT4G30130 | 31.429 | 245 | 153 | 5 | 364 | 597 | 401 | 641 | 6.77e-22 | 101 |
MS.gene91781.t1 | AT4G39790 | 31.250 | 224 | 147 | 5 | 364 | 583 | 375 | 595 | 1.34e-21 | 100 |
MS.gene91781.t1 | AT2G19090 | 30.364 | 247 | 155 | 5 | 364 | 597 | 482 | 724 | 2.05e-21 | 100 |
MS.gene91781.t1 | AT4G30130 | 43.210 | 81 | 45 | 1 | 364 | 444 | 401 | 480 | 1.02e-11 | 68.6 |
MS.gene91781.t1 | AT4G30130 | 43.210 | 81 | 45 | 1 | 364 | 444 | 401 | 480 | 1.02e-11 | 68.6 |
MS.gene91781.t1 | AT5G25590 | 54.237 | 59 | 27 | 0 | 1 | 59 | 1 | 59 | 1.12e-11 | 68.9 |
Find 159 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTATAAATTACCTACTTTA+TGG | 0.098163 | 8.3:+81205988 | None:intergenic |
TGCCGGAAATATTCGGAATT+TGG | 0.192821 | 8.3:+81209755 | None:intergenic |
CTCCACTTTGGACCGGCTTT+TGG | 0.216350 | 8.3:-81208941 | MS.gene91781:CDS |
CAGCTGCCATCAATGGTCTT+AGG | 0.218432 | 8.3:-81207992 | MS.gene91781:CDS |
CTCCAAATTCCGAATATTTC+CGG | 0.231370 | 8.3:-81209757 | MS.gene91781:CDS |
TCTGATGATGTATCGGATTC+TGG | 0.247422 | 8.3:+81209698 | None:intergenic |
CCAATATCTTCCACAGAGTT+TGG | 0.255194 | 8.3:+81206238 | None:intergenic |
GTCAAGAACTCAAGATTAAA+AGG | 0.266491 | 8.3:-81206366 | MS.gene91781:CDS |
CCAAACTCTGTGGAAGATAT+TGG | 0.303854 | 8.3:-81206238 | MS.gene91781:CDS |
ATGGGAAAACAAACTCTTTC+AGG | 0.306558 | 8.3:-81208917 | MS.gene91781:CDS |
AAACTTCTTCCGTTTGGAAC+TGG | 0.310325 | 8.3:-81209805 | MS.gene91781:CDS |
AGGTTTGCCTGGAATGTTTC+AGG | 0.312214 | 8.3:-81206074 | MS.gene91781:CDS |
CAATGTTGCTTTGCATTTCA+TGG | 0.320663 | 8.3:+81206746 | None:intergenic |
CGGAGATGTTGCAGATTAGT+AGG | 0.332632 | 8.3:-81209331 | MS.gene91781:CDS |
AGAACGTTGCCGGAAATATT+CGG | 0.340163 | 8.3:+81209748 | None:intergenic |
TCATATTCTATGGTTGGTAT+TGG | 0.351215 | 8.3:-81206268 | MS.gene91781:CDS |
AAAGTGGAGCAGAGGCTCTT+TGG | 0.352489 | 8.3:+81208955 | None:intergenic |
TGTTGCCGGCGGTGAGGTTC+CGG | 0.353203 | 8.3:-81209474 | MS.gene91781:CDS |
CAGCAGCATTAGCAACAAAA+TGG | 0.360224 | 8.3:-81206515 | MS.gene91781:CDS |
TCACCGCCGGCAACAAATTC+CGG | 0.362313 | 8.3:+81209482 | None:intergenic |
GCTTCCGAAGCGACAGTGTC+TGG | 0.370101 | 8.3:+81206436 | None:intergenic |
CTTCTGAAACTTCTTCCGTT+TGG | 0.372515 | 8.3:-81209811 | MS.gene91781:CDS |
AACACGTCGCCGGAAAATTC+CGG | 0.375532 | 8.3:-81209936 | MS.gene91781:CDS |
TGCTTTGCATTTCATGGTAC+TGG | 0.376222 | 8.3:+81206752 | None:intergenic |
TTTGTGGTTGTTACGGTGGC+TGG | 0.385764 | 8.3:+81209977 | None:intergenic |
AACTGCCAATGGTGGCTTTG+AGG | 0.395022 | 8.3:+81209020 | None:intergenic |
TTTGATGCCGGTTCACTTGA+AGG | 0.399037 | 8.3:-81208988 | MS.gene91781:CDS |
TAGTGACTGTAACCTTGTTA+TGG | 0.407255 | 8.3:+81208049 | None:intergenic |
AGTGCGCCGCCGCGAGGTAG+TGG | 0.407782 | 8.3:+81210140 | None:intergenic |
TTGAGTGACCTTTCGATGAT+TGG | 0.408622 | 8.3:+81206698 | None:intergenic |
AGGAGGTTCGGTGTAGTGAT+TGG | 0.415100 | 8.3:-81209565 | MS.gene91781:CDS |
GTCAATGCCTGAAACATTCC+AGG | 0.419912 | 8.3:+81206067 | None:intergenic |
TCGGCGGTTGAGAACGTTGC+CGG | 0.420345 | 8.3:+81209738 | None:intergenic |
AGCTGCCATCAATGGTCTTA+GGG | 0.421008 | 8.3:-81207991 | MS.gene91781:CDS |
CAGCTTGTTGAGCTTTGTCA+TGG | 0.421587 | 8.3:-81207951 | MS.gene91781:CDS |
AGTTGCCTGTTTGTGTGATT+CGG | 0.424981 | 8.3:+81206672 | None:intergenic |
GCCCGGTCCTTCAAGTGAAC+CGG | 0.428595 | 8.3:+81208981 | None:intergenic |
AACTTCTTCCGTTTGGAACT+GGG | 0.429013 | 8.3:-81209804 | MS.gene91781:CDS |
AGAGTCCCTAAGACCATTGA+TGG | 0.436049 | 8.3:+81207986 | None:intergenic |
TAACCTTGTTATGGTAGCCT+TGG | 0.439375 | 8.3:+81208058 | None:intergenic |
AACATCCGAATCACACAAAC+AGG | 0.442893 | 8.3:-81206677 | MS.gene91781:CDS |
AACATTGTACAGCAAGTTTG+TGG | 0.443164 | 8.3:-81206730 | MS.gene91781:CDS |
AAATCACCGGAATTTGTTGC+CGG | 0.450095 | 8.3:-81209488 | MS.gene91781:CDS |
AATCTACAGACAGGTTTGCC+TGG | 0.453101 | 8.3:-81206085 | MS.gene91781:CDS |
GAAGGTGGAGAGTGCGGAAC+CGG | 0.456738 | 8.3:+81210090 | None:intergenic |
CACCATTGGCAGTTAAATAC+CGG | 0.462465 | 8.3:-81209011 | MS.gene91781:CDS |
TTGTTGTTGTCATTGTTGAC+TGG | 0.464323 | 8.3:+81206538 | None:intergenic |
CGAGGAGGTGAATGAAGAAA+AGG | 0.465133 | 8.3:-81209441 | MS.gene91781:CDS |
TATTCGGAATTTGGAGGAGA+AGG | 0.467016 | 8.3:+81209764 | None:intergenic |
GGAGGTTCGGTGTAGTGATT+GGG | 0.467726 | 8.3:-81209564 | MS.gene91781:CDS |
TGCCGGTTCACTTGAAGGAC+CGG | 0.468386 | 8.3:-81208983 | MS.gene91781:CDS |
ACTAATTATTGTAACATCTC+AGG | 0.470791 | 8.3:-81208030 | MS.gene91781:CDS |
GTTAAATACCGGTTTGATGC+CGG | 0.472409 | 8.3:-81209000 | MS.gene91781:CDS |
CAGTTCGGAAACTCGCTTCT+CGG | 0.476259 | 8.3:+81209869 | None:intergenic |
TCGGAATTTGGAGGAGAAGG+AGG | 0.477917 | 8.3:+81209767 | None:intergenic |
GAAAACTGACACTGCTTACA+AGG | 0.482447 | 8.3:-81206344 | MS.gene91781:CDS |
TACAACTCATATTCTATGGT+TGG | 0.486108 | 8.3:-81206274 | MS.gene91781:CDS |
AAAGGTGAAGATGAAGCATA+AGG | 0.487575 | 8.3:-81209423 | MS.gene91781:CDS |
AAACGGAACGTGAGGAGGTT+CGG | 0.488757 | 8.3:-81209577 | MS.gene91781:CDS |
AAAGAGCCTCTGCTCCACTT+TGG | 0.490480 | 8.3:-81208953 | MS.gene91781:CDS |
CGTTGAACAAACGCTTGAAT+CGG | 0.491262 | 8.3:+81209892 | None:intergenic |
TTTGAGAAAGCGGCGGTGGC+CGG | 0.491434 | 8.3:-81209365 | MS.gene91781:CDS |
ACGGTGGCTGGACGAGGAGG+TGG | 0.495073 | 8.3:+81209989 | None:intergenic |
GAATTTGGAGGAGAAGGAGG+AGG | 0.496035 | 8.3:+81209770 | None:intergenic |
TGTTCCAGACACTGTCGCTT+CGG | 0.496334 | 8.3:-81206440 | MS.gene91781:CDS |
ACCTCCTCGTCTTTCCTCAC+CGG | 0.497977 | 8.3:+81209455 | None:intergenic |
ACTACCTCAGCTGCCATCAA+TGG | 0.500376 | 8.3:-81207999 | MS.gene91781:CDS |
ACCTGAAACAATGGGTTGCA+CGG | 0.501443 | 8.3:-81210242 | None:intergenic |
GAAGCATTCGAAGGCTATTG+AGG | 0.506274 | 8.3:-81206131 | MS.gene91781:CDS |
GCACTCTCCACCTTCGCCGC+CGG | 0.510838 | 8.3:-81210082 | MS.gene91781:CDS |
GTGTGAAGATTGAGCATGAA+AGG | 0.511307 | 8.3:-81208145 | MS.gene91781:CDS |
AGGTTCACCGGCGGCGAAGG+TGG | 0.514217 | 8.3:+81210075 | None:intergenic |
AGAATGTGTGGAAGCTTCAC+CGG | 0.514510 | 8.3:+81209917 | None:intergenic |
TAGTTTCCATCCATCACAAA+AGG | 0.515874 | 8.3:+81206474 | None:intergenic |
CGGAAATATTCGGAATTTGG+AGG | 0.517284 | 8.3:+81209758 | None:intergenic |
GGTGGCCGGAGATCGGTTAT+CGG | 0.518645 | 8.3:-81209351 | MS.gene91781:CDS |
GTTGTTACGGTGGCTGGACG+AGG | 0.518756 | 8.3:+81209983 | None:intergenic |
GAGAGGTTCACCGGCGGCGA+AGG | 0.519230 | 8.3:+81210072 | None:intergenic |
GTGGCTGGACGAGGAGGTGG+CGG | 0.521485 | 8.3:+81209992 | None:intergenic |
GGAACAAGAACTAGATCGAT+TGG | 0.523973 | 8.3:-81209600 | MS.gene91781:CDS |
AGCTTGTTGAGCTTTGTCAT+GGG | 0.524450 | 8.3:-81207950 | MS.gene91781:intron |
CGAGAAGCGAGTTTCCGAAC+TGG | 0.524694 | 8.3:-81209868 | MS.gene91781:CDS |
TAGAATCAGCTCTGTCAGCT+TGG | 0.525936 | 8.3:-81206642 | MS.gene91781:CDS |
CTTTCGATGATTGGTTCACA+AGG | 0.529959 | 8.3:+81206707 | None:intergenic |
CAAGTGAACCGGCATCAAAC+CGG | 0.530021 | 8.3:+81208992 | None:intergenic |
TGAGCAAAGTGAGCTCAACT+TGG | 0.530284 | 8.3:-81209044 | MS.gene91781:CDS |
AAGCGGCGGTGGCCGGAGAT+CGG | 0.531676 | 8.3:-81209358 | MS.gene91781:CDS |
CAGAGGCTCTTTGGACCGCC+CGG | 0.533714 | 8.3:+81208964 | None:intergenic |
GGAAGATATTGGACAAGGCT+TGG | 0.535265 | 8.3:-81206227 | MS.gene91781:CDS |
AGAACTAGATCGATTGGAAA+CGG | 0.539459 | 8.3:-81209594 | MS.gene91781:CDS |
TCAGAATCACAAGACTGAAA+CGG | 0.540629 | 8.3:-81209621 | MS.gene91781:CDS |
TCAACCGCCGAATCATAAAC+CGG | 0.541451 | 8.3:-81209726 | MS.gene91781:CDS |
ACACTTAATAATCTACAGAC+AGG | 0.546583 | 8.3:-81206094 | MS.gene91781:CDS |
GCCTCTGCTCCACTTTGGAC+CGG | 0.546977 | 8.3:-81208948 | MS.gene91781:CDS |
TTGCTTAATTAGGCTAGAGA+AGG | 0.551085 | 8.3:-81208167 | MS.gene91781:intron |
ATTGGAAACGGAACGTGAGG+AGG | 0.556480 | 8.3:-81209582 | MS.gene91781:CDS |
GAACGATTCTGATGATGTAT+CGG | 0.557299 | 8.3:+81209691 | None:intergenic |
TTAGTAGGGCTCAACTTGAT+CGG | 0.558121 | 8.3:-81209316 | MS.gene91781:CDS |
GGAGATGTTGCAGATTAGTA+GGG | 0.562230 | 8.3:-81209330 | MS.gene91781:CDS |
GCGGTTGGAATGAACCAGTT+CGG | 0.568073 | 8.3:+81209854 | None:intergenic |
GGAATTTGTTGCCGGCGGTG+AGG | 0.568540 | 8.3:-81209480 | MS.gene91781:CDS |
AAAATTCTCCCAGTTCCAAA+CGG | 0.570472 | 8.3:+81209796 | None:intergenic |
CAAAAGGAAAATGCATCAGA+TGG | 0.571615 | 8.3:+81206490 | None:intergenic |
TAAACTCGACAACGAAGAAA+CGG | 0.572183 | 8.3:-81210215 | MS.gene91781:CDS |
AACCGGTATTTAACTGCCAA+TGG | 0.572575 | 8.3:+81209009 | None:intergenic |
CCGTTCATATGCCATAAAGT+AGG | 0.573938 | 8.3:-81205999 | None:intergenic |
TTGGACCTCAAAGCCACCAT+TGG | 0.576071 | 8.3:-81209025 | MS.gene91781:CDS |
GGAGACAGCGAGAGGTTCAC+CGG | 0.577083 | 8.3:+81210063 | None:intergenic |
CAGTGTCTGGAACACGGTCA+AGG | 0.579288 | 8.3:+81206449 | None:intergenic |
TGCCAAAAGCCGGTCCAAAG+TGG | 0.581464 | 8.3:+81208939 | None:intergenic |
CAAACTCTTTCAGGAAGTGA+AGG | 0.582816 | 8.3:-81208908 | MS.gene91781:intron |
TCTGCAGAGTGAAGAATGCA+AGG | 0.582873 | 8.3:-81208111 | MS.gene91781:CDS |
TGTAACTCTCTTCGCCTCAC+CGG | 0.588335 | 8.3:-81210109 | MS.gene91781:CDS |
GCCGGTTCACTTGAAGGACC+GGG | 0.588752 | 8.3:-81208982 | MS.gene91781:CDS |
AGAGCGCCGCCGTCTCATGA+AGG | 0.589240 | 8.3:-81210179 | MS.gene91781:CDS |
GCCGGTCCAAAGTGGAGCAG+AGG | 0.591183 | 8.3:+81208947 | None:intergenic |
CATCTCCGATAACCGATCTC+CGG | 0.591527 | 8.3:+81209346 | None:intergenic |
GGTTCGGTGTAGTGATTGGG+AGG | 0.592402 | 8.3:-81209561 | MS.gene91781:CDS |
CAGTTTCTGAAACACGTCGC+CGG | 0.594202 | 8.3:-81209946 | MS.gene91781:CDS |
AGTGTCTGGAACACGGTCAA+GGG | 0.596369 | 8.3:+81206450 | None:intergenic |
AAGACCATTGATGGCAGCTG+AGG | 0.609697 | 8.3:+81207995 | None:intergenic |
GGCGGCGAAGGTGGAGAGTG+CGG | 0.611743 | 8.3:+81210084 | None:intergenic |
GTTACGGTGGCTGGACGAGG+AGG | 0.611751 | 8.3:+81209986 | None:intergenic |
CGGTATTTAACTGCCAATGG+TGG | 0.612149 | 8.3:+81209012 | None:intergenic |
GACGTGTTTCAGAAACTGTA+CGG | 0.616647 | 8.3:+81209951 | None:intergenic |
ACTGTGTTGATGAAAACGGC+GGG | 0.618606 | 8.3:+81210031 | None:intergenic |
GAAAACGGCGGGAATGTCGT+CGG | 0.622356 | 8.3:+81210042 | None:intergenic |
TGGAATAATTCCAAACTCTG+TGG | 0.623866 | 8.3:-81206248 | MS.gene91781:CDS |
AACATAGAATCATTCACATG+TGG | 0.629855 | 8.3:-81206786 | MS.gene91781:intron |
TGAAAAGTTGAAGCATTCGA+AGG | 0.634173 | 8.3:-81206140 | MS.gene91781:CDS |
CTTGAATCGGAGAGAATGTG+TGG | 0.636876 | 8.3:+81209905 | None:intergenic |
TCGATTGGAAACGGAACGTG+AGG | 0.636903 | 8.3:-81209585 | MS.gene91781:CDS |
CAGAGTGAAGAATGCAAGGG+AGG | 0.640119 | 8.3:-81208107 | MS.gene91781:CDS |
CCTACTTTATGGCATATGAA+CGG | 0.642947 | 8.3:+81205999 | None:intergenic |
TGACAAAGCTCAACAAGCTG+AGG | 0.646039 | 8.3:+81207954 | None:intergenic |
TGGAGAGTGCGGAACCGGTG+AGG | 0.647266 | 8.3:+81210095 | None:intergenic |
AAACCAAGGCTACCATAACA+AGG | 0.647826 | 8.3:-81208061 | MS.gene91781:CDS |
TCACCGGAATTTGTTGCCGG+CGG | 0.648273 | 8.3:-81209485 | MS.gene91781:CDS |
CTTGTGAACCAATCATCGAA+AGG | 0.650319 | 8.3:-81206706 | MS.gene91781:CDS |
AAGCGACAGTGTCTGGAACA+CGG | 0.656033 | 8.3:+81206443 | None:intergenic |
CGCTCGCCACTACCTCGCGG+CGG | 0.656448 | 8.3:-81210146 | MS.gene91781:CDS |
ATTGCTTAACTGATATTACG+TGG | 0.657821 | 8.3:+81206389 | None:intergenic |
CCTCACCGGAACCTCACCGC+CGG | 0.660549 | 8.3:+81209469 | None:intergenic |
ATGTCGTCGGAGACAGCGAG+AGG | 0.661397 | 8.3:+81210055 | None:intergenic |
TACTGTGTTGATGAAAACGG+CGG | 0.666428 | 8.3:+81210030 | None:intergenic |
CTGCAGAGTGAAGAATGCAA+GGG | 0.667767 | 8.3:-81208110 | MS.gene91781:CDS |
AACAAAGATAGACAAAACCA+AGG | 0.673276 | 8.3:-81208075 | MS.gene91781:CDS |
TCCGGTGAGGAAAGACGAGG+AGG | 0.676721 | 8.3:-81209456 | MS.gene91781:CDS |
ACAACGAAGAAACGGTGCGG+CGG | 0.676785 | 8.3:-81210207 | MS.gene91781:CDS |
CCGGCGGTGAGGTTCCGGTG+AGG | 0.679781 | 8.3:-81209469 | MS.gene91781:CDS |
AATCAGAGTGCGCCGCCGCG+AGG | 0.683669 | 8.3:+81210134 | None:intergenic |
TCTGTGGAAGATATTGGACA+AGG | 0.692232 | 8.3:-81206232 | MS.gene91781:CDS |
AAACTGCTTCCTTCATGAGA+CGG | 0.693412 | 8.3:+81210170 | None:intergenic |
CTGCTTCCTTCATGAGACGG+CGG | 0.713162 | 8.3:+81210173 | None:intergenic |
GACAGCGAGAGGTTCACCGG+CGG | 0.729279 | 8.3:+81210066 | None:intergenic |
TTACGCTCGCCACTACCTCG+CGG | 0.753107 | 8.3:-81210149 | MS.gene91781:CDS |
TCGACAACGAAGAAACGGTG+CGG | 0.756888 | 8.3:-81210210 | MS.gene91781:CDS |
GGTTCCGGTGAGGAAAGACG+AGG | 0.762077 | 8.3:-81209459 | MS.gene91781:CDS |
GGTTCACTTGAAGGACCGGG+CGG | 0.787079 | 8.3:-81208979 | MS.gene91781:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAATCATATATTTAAATTG+GGG | - | chr8.3:81208411-81208430 | MS.gene91781:intron | 10.0% |
!! | AAATAGTATTTGAGAAAATA+TGG | - | chr8.3:81208612-81208631 | MS.gene91781:intron | 15.0% |
!! | ATATTGAAATTTGAATTGTA+AGG | + | chr8.3:81209232-81209251 | None:intergenic | 15.0% |
!! | ATGAAATTGGAAAATTATAA+TGG | - | chr8.3:81209154-81209173 | MS.gene91781:intron | 15.0% |
!! | TAATCATATATTTAAATTGG+GGG | - | chr8.3:81208412-81208431 | MS.gene91781:intron | 15.0% |
!! | TATTGAAATTTGAATTGTAA+GGG | + | chr8.3:81209231-81209250 | None:intergenic | 15.0% |
!!! | CAAATACTATTTCAAAATTT+TGG | + | chr8.3:81208604-81208623 | None:intergenic | 15.0% |
!!! | TAATTTTTTGAACAATGTAA+AGG | - | chr8.3:81207395-81207414 | MS.gene91781:intron | 15.0% |
!!! | TATAAACTTGATAATCATAA+AGG | - | chr8.3:81209249-81209268 | MS.gene91781:intron | 15.0% |
!! | AGATTTATATCTGAAGAAAT+TGG | - | chr8.3:81207065-81207084 | MS.gene91781:intron | 20.0% |
!! | TCTAAATACTCATCTAAATT+AGG | - | chr8.3:81208008-81208027 | MS.gene91781:CDS | 20.0% |
!! | TCTCAATACTAGTATATATA+TGG | + | chr8.3:81209287-81209306 | None:intergenic | 20.0% |
!!! | ATACTATTTCAAAATTTTGG+TGG | + | chr8.3:81208601-81208620 | None:intergenic | 20.0% |
!!! | ATTTAGAGTTAATTTGTGAA+GGG | + | chr8.3:81207995-81208014 | None:intergenic | 20.0% |
!!! | TAGTTTAGGTTGAATTAAAA+AGG | + | chr8.3:81207950-81207969 | None:intergenic | 20.0% |
!!! | TATTTAGAGTTAATTTGTGA+AGG | + | chr8.3:81207996-81208015 | None:intergenic | 20.0% |
!!! | TTTTGCTTAATTGCTTAATT+AGG | - | chr8.3:81208055-81208074 | MS.gene91781:CDS | 20.0% |
! | AACTTGATTCTACTGTATTA+TGG | + | chr8.3:81208754-81208773 | None:intergenic | 25.0% |
! | ACTAATTATTGTAACATCTC+AGG | - | chr8.3:81208202-81208221 | MS.gene91781:intron | 25.0% |
! | AGTGAACAAAAAATAACTTC+AGG | + | chr8.3:81208862-81208881 | None:intergenic | 25.0% |
! | ATTTGAGAGTTAATTCTCAA+TGG | - | chr8.3:81208707-81208726 | MS.gene91781:intron | 25.0% |
! | GTAACTGTCAACAAATAAAA+TGG | + | chr8.3:81209010-81209029 | None:intergenic | 25.0% |
!! | GGATTTAATGTTTTTCGTTA+TGG | - | chr8.3:81207086-81207105 | MS.gene91781:intron | 25.0% |
!! | GTTTTACAACTCATATTCTA+TGG | - | chr8.3:81209954-81209973 | MS.gene91781:CDS | 25.0% |
!! | TACGATAAATTTTCATGTTG+AGG | - | chr8.3:81207530-81207549 | MS.gene91781:intron | 25.0% |
!! | TTGATTTCATAATTTTGTCG+AGG | - | chr8.3:81207631-81207650 | MS.gene91781:intron | 25.0% |
!!! | AATAAAATGGTTTGCTCAAA+TGG | + | chr8.3:81208997-81209016 | None:intergenic | 25.0% |
!!! | ATAAAATGGTTTGCTCAAAT+GGG | + | chr8.3:81208996-81209015 | None:intergenic | 25.0% |
!!! | CTCTTTGAAATTTTATGATC+CGG | + | chr8.3:81209630-81209649 | None:intergenic | 25.0% |
!!! | GAAGTTATTTTTTGTTCACT+AGG | - | chr8.3:81208862-81208881 | MS.gene91781:intron | 25.0% |
!!! | TAAAAAGGAAGTGACTTTTT+TGG | + | chr8.3:81207935-81207954 | None:intergenic | 25.0% |
!!! | TGATTCAATTTCGAGTTATA+AGG | - | chr8.3:81207735-81207754 | MS.gene91781:intron | 25.0% |
!!! | TTGCAAGTTGATATTAGTTT+AGG | + | chr8.3:81207964-81207983 | None:intergenic | 25.0% |
!!! | TTTTACTGTGTTGATGAAAA+CGG | + | chr8.3:81206208-81206227 | None:intergenic | 25.0% |
AACAAAGATAGACAAAACCA+AGG | - | chr8.3:81208157-81208176 | MS.gene91781:CDS | 30.0% | |
AACAATGTAAAGGTCTTCTA+GGG | - | chr8.3:81207405-81207424 | MS.gene91781:intron | 30.0% | |
AACATAGAATCATTCACATG+TGG | - | chr8.3:81209446-81209465 | MS.gene91781:CDS | 30.0% | |
ACACTTAATAATCTACAGAC+AGG | - | chr8.3:81210138-81210157 | MS.gene91781:CDS | 30.0% | |
ACTTATATCTAAGTTCAGAG+AGG | + | chr8.3:81208334-81208353 | None:intergenic | 30.0% | |
ATGTCTCTCTATTCTACTAT+TGG | - | chr8.3:81208306-81208325 | MS.gene91781:intron | 30.0% | |
ATTGCTTAACTGATATTACG+TGG | + | chr8.3:81209846-81209865 | None:intergenic | 30.0% | |
CAATTTCATATACTATTGCC+AGG | + | chr8.3:81209143-81209162 | None:intergenic | 30.0% | |
CATGTGAATGATTCTATGTT+TGG | + | chr8.3:81209446-81209465 | None:intergenic | 30.0% | |
CTGGCAATAGTATATGAAAT+TGG | - | chr8.3:81209141-81209160 | MS.gene91781:intron | 30.0% | |
CTTATATCTAAGTTCAGAGA+GGG | + | chr8.3:81208333-81208352 | None:intergenic | 30.0% | |
GAACATAGTAGCATATTTCT+TGG | - | chr8.3:81209176-81209195 | MS.gene91781:intron | 30.0% | |
GGTAGTGTAGTAATAATTGA+TGG | - | chr8.3:81207427-81207446 | MS.gene91781:intron | 30.0% | |
GTATTTGCACAATGTATGAA+AGG | - | chr8.3:81208437-81208456 | MS.gene91781:intron | 30.0% | |
GTCAAGAACTCAAGATTAAA+AGG | - | chr8.3:81209866-81209885 | MS.gene91781:CDS | 30.0% | |
GTGTGTTTGATATTCAATCA+AGG | - | chr8.3:81208524-81208543 | MS.gene91781:intron | 30.0% | |
TACAACTCATATTCTATGGT+TGG | - | chr8.3:81209958-81209977 | MS.gene91781:CDS | 30.0% | |
TATCTTATTCACATATGAGC+TGG | - | chr8.3:81208367-81208386 | MS.gene91781:intron | 30.0% | |
TCTACTGTATTATGGCAATA+CGG | + | chr8.3:81208746-81208765 | None:intergenic | 30.0% | |
TTGATGCACAACAATAATGT+AGG | + | chr8.3:81209358-81209377 | None:intergenic | 30.0% | |
! | AACAAATTCCGGTGATTTTT+CGG | + | chr8.3:81206742-81206761 | None:intergenic | 30.0% |
! | AATACAGTAGAATCAAGTTG+TGG | - | chr8.3:81208755-81208774 | MS.gene91781:intron | 30.0% |
! | ATTGCTATTCGTACTTTCAT+TGG | - | chr8.3:81208574-81208593 | MS.gene91781:intron | 30.0% |
! | ATTTCTTGGTAAAGCATCTT+TGG | - | chr8.3:81209190-81209209 | MS.gene91781:intron | 30.0% |
! | TCATATTCTATGGTTGGTAT+TGG | - | chr8.3:81209964-81209983 | MS.gene91781:CDS | 30.0% |
! | TTGCTATTCGTACTTTCATT+GGG | - | chr8.3:81208575-81208594 | MS.gene91781:intron | 30.0% |
!! | AAGAGAGAATTTTGAGAAAG+CGG | - | chr8.3:81206857-81206876 | MS.gene91781:intron | 30.0% |
!! | TAAAATGGTTTGCTCAAATG+GGG | + | chr8.3:81208995-81209014 | None:intergenic | 30.0% |
!! | TATGAAGATGAATTTTCGAG+TGG | + | chr8.3:81206578-81206597 | None:intergenic | 30.0% |
!! | TTATTTTGTCACTACATGGT+TGG | - | chr8.3:81209653-81209672 | MS.gene91781:CDS | 30.0% |
!!! | GACTTTATTTTGTCACTACA+TGG | - | chr8.3:81209649-81209668 | MS.gene91781:CDS | 30.0% |
!!! | TATTTTTTGTTCACTAGGTG+TGG | - | chr8.3:81208867-81208886 | MS.gene91781:intron | 30.0% |
AAAATTCTCCCAGTTCCAAA+CGG | + | chr8.3:81206439-81206458 | None:intergenic | 35.0% | |
AAAGGTGAAGATGAAGCATA+AGG | - | chr8.3:81206809-81206828 | MS.gene91781:intron | 35.0% | |
AACACTAAAACACCTAAAGC+AGG | + | chr8.3:81207575-81207594 | None:intergenic | 35.0% | |
AACATTGTACAGCAAGTTTG+TGG | - | chr8.3:81209502-81209521 | MS.gene91781:CDS | 35.0% | |
ACAATGTAAAGGTCTTCTAG+GGG | - | chr8.3:81207406-81207425 | MS.gene91781:intron | 35.0% | |
AGAACTAGATCGATTGGAAA+CGG | - | chr8.3:81206638-81206657 | MS.gene91781:CDS | 35.0% | |
AGGGAAACAACTATACAGAA+TGG | + | chr8.3:81209111-81209130 | None:intergenic | 35.0% | |
ATGAGATAGTCAACAAAGTC+AGG | - | chr8.3:81208490-81208509 | MS.gene91781:intron | 35.0% | |
ATGGGAAAACAAACTCTTTC+AGG | - | chr8.3:81207315-81207334 | MS.gene91781:intron | 35.0% | |
CAAAAGGAAAATGCATCAGA+TGG | + | chr8.3:81209745-81209764 | None:intergenic | 35.0% | |
CAGTGAGTTAAGCAAAATCA+CGG | + | chr8.3:81207694-81207713 | None:intergenic | 35.0% | |
CTACTGTATTATGGCAATAC+GGG | + | chr8.3:81208745-81208764 | None:intergenic | 35.0% | |
CTCCAAATTCCGAATATTTC+CGG | - | chr8.3:81206475-81206494 | MS.gene91781:CDS | 35.0% | |
GAACAATGTAAAGGTCTTCT+AGG | - | chr8.3:81207404-81207423 | MS.gene91781:intron | 35.0% | |
TAAACTCGACAACGAAGAAA+CGG | - | chr8.3:81206017-81206036 | MS.gene91781:CDS | 35.0% | |
TAGTGACTGTAACCTTGTTA+TGG | + | chr8.3:81208186-81208205 | None:intergenic | 35.0% | |
TAGTTTCCATCCATCACAAA+AGG | + | chr8.3:81209761-81209780 | None:intergenic | 35.0% | |
TATAAGGAATGAGTCGAGTA+GGG | - | chr8.3:81207751-81207770 | MS.gene91781:intron | 35.0% | |
TCAGAATCACAAGACTGAAA+CGG | - | chr8.3:81206611-81206630 | MS.gene91781:CDS | 35.0% | |
TTACTCTTGCACACATAGTT+AGG | + | chr8.3:81208808-81208827 | None:intergenic | 35.0% | |
TTATAAGGAATGAGTCGAGT+AGG | - | chr8.3:81207750-81207769 | MS.gene91781:intron | 35.0% | |
TTGCTTAATTAGGCTAGAGA+AGG | - | chr8.3:81208065-81208084 | MS.gene91781:CDS | 35.0% | |
! | ATCACAGAATCAGTCACTTT+CGG | - | chr8.3:81207464-81207483 | MS.gene91781:intron | 35.0% |
! | CTGTATAGTTGTTTCCCTTA+AGG | - | chr8.3:81209113-81209132 | MS.gene91781:intron | 35.0% |
! | GAACGATTCTGATGATGTAT+CGG | + | chr8.3:81206544-81206563 | None:intergenic | 35.0% |
! | GATGCATTTTCCTTTTGTGA+TGG | - | chr8.3:81209748-81209767 | MS.gene91781:CDS | 35.0% |
! | GGATTTTCCGGTTTATGATT+CGG | + | chr8.3:81206516-81206535 | None:intergenic | 35.0% |
! | TGAAAAGTTGAAGCATTCGA+AGG | - | chr8.3:81210092-81210111 | MS.gene91781:CDS | 35.0% |
! | TTGTTGTTGTCATTGTTGAC+TGG | + | chr8.3:81209697-81209716 | None:intergenic | 35.0% |
!! | CAATGTTGCTTTGCATTTCA+TGG | + | chr8.3:81209489-81209508 | None:intergenic | 35.0% |
!! | CATTTTCCTTTTGTGATGGA+TGG | - | chr8.3:81209752-81209771 | MS.gene91781:CDS | 35.0% |
!! | CTTGGCATTCAAGTTTTATC+CGG | - | chr8.3:81209608-81209627 | MS.gene91781:CDS | 35.0% |
!!! | CCAATTTTTTCTCAGCAAGA+GGG | + | chr8.3:81210041-81210060 | None:intergenic | 35.0% |
!!! | TCCAATTTTTTCTCAGCAAG+AGG | + | chr8.3:81210042-81210061 | None:intergenic | 35.0% |
!!! | TGTTGATTCATTTTGATGCG+CGG | + | chr8.3:81206400-81206419 | None:intergenic | 35.0% |
AAACCAAGGCTACCATAACA+AGG | - | chr8.3:81208171-81208190 | MS.gene91781:intron | 40.0% | |
AAACTGCTTCCTTCATGAGA+CGG | + | chr8.3:81206065-81206084 | None:intergenic | 40.0% | |
AACATCCGAATCACACAAAC+AGG | - | chr8.3:81209555-81209574 | MS.gene91781:CDS | 40.0% | |
AACCGGTATTTAACTGCCAA+TGG | + | chr8.3:81207226-81207245 | None:intergenic | 40.0% | |
AGAACGTTGCCGGAAATATT+CGG | + | chr8.3:81206487-81206506 | None:intergenic | 40.0% | |
AGTTATCGCCGAAAAATCAC+CGG | - | chr8.3:81206731-81206750 | MS.gene91781:CDS | 40.0% | |
AGTTGCCTGTTTGTGTGATT+CGG | + | chr8.3:81209563-81209582 | None:intergenic | 40.0% | |
CAAACTCTTTCAGGAAGTGA+AGG | - | chr8.3:81207324-81207343 | MS.gene91781:intron | 40.0% | |
CACCATTGGCAGTTAAATAC+CGG | - | chr8.3:81207221-81207240 | MS.gene91781:intron | 40.0% | |
CAGCAGCATTAGCAACAAAA+TGG | - | chr8.3:81209717-81209736 | MS.gene91781:CDS | 40.0% | |
CATGCTAATCAAACGACGTT+TGG | + | chr8.3:81207820-81207839 | None:intergenic | 40.0% | |
CCCTCTTGCTGAGAAAAAAT+TGG | - | chr8.3:81210038-81210057 | MS.gene91781:CDS | 40.0% | |
CGGAAATATTCGGAATTTGG+AGG | + | chr8.3:81206477-81206496 | None:intergenic | 40.0% | |
CGTCGTTTGATTAGCATGTT+TGG | - | chr8.3:81207822-81207841 | MS.gene91781:intron | 40.0% | |
CGTTGAACAAACGCTTGAAT+CGG | + | chr8.3:81206343-81206362 | None:intergenic | 40.0% | |
CTTAACTCACTGCGAAACAA+GGG | - | chr8.3:81207702-81207721 | MS.gene91781:intron | 40.0% | |
CTTGTGAACCAATCATCGAA+AGG | - | chr8.3:81209526-81209545 | MS.gene91781:CDS | 40.0% | |
GAAAACTGACACTGCTTACA+AGG | - | chr8.3:81209888-81209907 | MS.gene91781:CDS | 40.0% | |
GACGTGTTTCAGAAACTGTA+CGG | + | chr8.3:81206284-81206303 | None:intergenic | 40.0% | |
GGAACAAGAACTAGATCGAT+TGG | - | chr8.3:81206632-81206651 | MS.gene91781:CDS | 40.0% | |
GGAGATGTTGCAGATTAGTA+GGG | - | chr8.3:81206902-81206921 | MS.gene91781:intron | 40.0% | |
GTCAACAAAGTCAGGAACTT+AGG | - | chr8.3:81208498-81208517 | MS.gene91781:intron | 40.0% | |
GTGTGAAGATTGAGCATGAA+AGG | - | chr8.3:81208087-81208106 | MS.gene91781:CDS | 40.0% | |
GTTTGCTTACTGAGAAAGTG+CGG | - | chr8.3:81206986-81207005 | MS.gene91781:intron | 40.0% | |
TATTCGGAATTTGGAGGAGA+AGG | + | chr8.3:81206471-81206490 | None:intergenic | 40.0% | |
TCTGTGGAAGATATTGGACA+AGG | - | chr8.3:81210000-81210019 | MS.gene91781:CDS | 40.0% | |
TGCCGGAAATATTCGGAATT+TGG | + | chr8.3:81206480-81206499 | None:intergenic | 40.0% | |
TGCTTTGCATTTCATGGTAC+TGG | + | chr8.3:81209483-81209502 | None:intergenic | 40.0% | |
TTAGTAGGGCTCAACTTGAT+CGG | - | chr8.3:81206916-81206935 | MS.gene91781:intron | 40.0% | |
TTGAGTGACCTTTCGATGAT+TGG | + | chr8.3:81209537-81209556 | None:intergenic | 40.0% | |
! | AAACTTCTTCCGTTTGGAAC+TGG | - | chr8.3:81206427-81206446 | MS.gene91781:CDS | 40.0% |
! | AACTTCTTCCGTTTGGAACT+GGG | - | chr8.3:81206428-81206447 | MS.gene91781:CDS | 40.0% |
! | AGAAACTGTACGGAGTTTTG+TGG | + | chr8.3:81206274-81206293 | None:intergenic | 40.0% |
! | CTGATGATGTTTCCTGCTTT+AGG | - | chr8.3:81207560-81207579 | MS.gene91781:intron | 40.0% |
! | CTTTCGATGATTGGTTCACA+AGG | + | chr8.3:81209528-81209547 | None:intergenic | 40.0% |
! | GTATCGGATTCTGGATTTTC+CGG | + | chr8.3:81206528-81206547 | None:intergenic | 40.0% |
! | TAACCTTGTTATGGTAGCCT+TGG | + | chr8.3:81208177-81208196 | None:intergenic | 40.0% |
! | TACTGTGTTGATGAAAACGG+CGG | + | chr8.3:81206205-81206224 | None:intergenic | 40.0% |
! | TATTGCCAGGTTGACCTTAA+GGG | + | chr8.3:81209130-81209149 | None:intergenic | 40.0% |
! | TCTGATGATGTATCGGATTC+TGG | + | chr8.3:81206537-81206556 | None:intergenic | 40.0% |
! | TTTGCTTACTGAGAAAGTGC+GGG | - | chr8.3:81206987-81207006 | MS.gene91781:intron | 40.0% |
!! | AAATCACCGGAATTTGTTGC+CGG | - | chr8.3:81206744-81206763 | MS.gene91781:CDS | 40.0% |
!! | ACGGAGTTTTGTGGTTGTTA+CGG | + | chr8.3:81206265-81206284 | None:intergenic | 40.0% |
!! | AGAGAATTTTGAGAAAGCGG+CGG | - | chr8.3:81206860-81206879 | MS.gene91781:intron | 40.0% |
!! | AGCTTGTTGAGCTTTGTCAT+GGG | - | chr8.3:81208282-81208301 | MS.gene91781:intron | 40.0% |
!! | CTTCTGAAACTTCTTCCGTT+TGG | - | chr8.3:81206421-81206440 | MS.gene91781:CDS | 40.0% |
!! | GTTAAATACCGGTTTGATGC+CGG | - | chr8.3:81207232-81207251 | MS.gene91781:intron | 40.0% |
!! | TTTTCCGGTTTATGATTCGG+CGG | + | chr8.3:81206513-81206532 | None:intergenic | 40.0% |
AATCTACAGACAGGTTTGCC+TGG | - | chr8.3:81210147-81210166 | MS.gene91781:CDS | 45.0% | |
AGAATGTGTGGAAGCTTCAC+CGG | + | chr8.3:81206318-81206337 | None:intergenic | 45.0% | |
AGAGTCCCTAAGACCATTGA+TGG | + | chr8.3:81208249-81208268 | None:intergenic | 45.0% | |
AGGGTGAGTGGATGGATAAT+AGG | - | chr8.3:81207770-81207789 | MS.gene91781:intron | 45.0% | |
AGGTTTGCCTGGAATGTTTC+AGG | - | chr8.3:81210158-81210177 | MS.gene91781:CDS | 45.0% | |
ATTAACTGTCGTTGCTGCAC+AGG | + | chr8.3:81209311-81209330 | None:intergenic | 45.0% | |
CACTAGGTGTGGTGTATGAA+TGG | - | chr8.3:81208878-81208897 | MS.gene91781:intron | 45.0% | |
CAGCGAGTTCTGCGAAATTA+CGG | - | chr8.3:81208906-81208925 | MS.gene91781:intron | 45.0% | |
CGAGGAGGTGAATGAAGAAA+AGG | - | chr8.3:81206791-81206810 | MS.gene91781:intron | 45.0% | |
CGGAGATGTTGCAGATTAGT+AGG | - | chr8.3:81206901-81206920 | MS.gene91781:intron | 45.0% | |
CGGTATTTAACTGCCAATGG+TGG | + | chr8.3:81207223-81207242 | None:intergenic | 45.0% | |
CTGCAGAGTGAAGAATGCAA+GGG | - | chr8.3:81208122-81208141 | MS.gene91781:CDS | 45.0% | |
CTTGAATCGGAGAGAATGTG+TGG | + | chr8.3:81206330-81206349 | None:intergenic | 45.0% | |
GAGCAACACTGAGTCTGAAT+TGG | + | chr8.3:81208647-81208666 | None:intergenic | 45.0% | |
GCAGGAAACATCATCAGCAA+AGG | + | chr8.3:81207557-81207576 | None:intergenic | 45.0% | |
GCTTAACTCACTGCGAAACA+AGG | - | chr8.3:81207701-81207720 | MS.gene91781:intron | 45.0% | |
GGAAGATATTGGACAAGGCT+TGG | - | chr8.3:81210005-81210024 | MS.gene91781:CDS | 45.0% | |
GTCAATGCCTGAAACATTCC+AGG | + | chr8.3:81210168-81210187 | None:intergenic | 45.0% | |
TAGAATCAGCTCTGTCAGCT+TGG | - | chr8.3:81209590-81209609 | MS.gene91781:CDS | 45.0% | |
TCAACCGCCGAATCATAAAC+CGG | - | chr8.3:81206506-81206525 | MS.gene91781:CDS | 45.0% | |
TCTGCAGAGTGAAGAATGCA+AGG | - | chr8.3:81208121-81208140 | MS.gene91781:CDS | 45.0% | |
TGACAAAGCTCAACAAGCTG+AGG | + | chr8.3:81208281-81208300 | None:intergenic | 45.0% | |
TGAGCAAAGTGAGCTCAACT+TGG | - | chr8.3:81207188-81207207 | MS.gene91781:intron | 45.0% | |
TGTGCAGCAACGACAGTTAA+TGG | - | chr8.3:81209310-81209329 | MS.gene91781:CDS | 45.0% | |
TGTTTCCCTTAAGGTCAACC+TGG | - | chr8.3:81209122-81209141 | MS.gene91781:intron | 45.0% | |
! | ACTGTGTTGATGAAAACGGC+GGG | + | chr8.3:81206204-81206223 | None:intergenic | 45.0% |
! | AGCTGCCATCAATGGTCTTA+GGG | - | chr8.3:81208241-81208260 | MS.gene91781:intron | 45.0% |
! | CTATTGCCAGGTTGACCTTA+AGG | + | chr8.3:81209131-81209150 | None:intergenic | 45.0% |
! | GAAGCATTCGAAGGCTATTG+AGG | - | chr8.3:81210101-81210120 | MS.gene91781:CDS | 45.0% |
! | GAAGCTTCACCGGAATTTTC+CGG | + | chr8.3:81206308-81206327 | None:intergenic | 45.0% |
! | TGTTTTCCCATGCCAAAAGC+CGG | + | chr8.3:81207306-81207325 | None:intergenic | 45.0% |
!! | CAGCTTGTTGAGCTTTGTCA+TGG | - | chr8.3:81208281-81208300 | MS.gene91781:intron | 45.0% |
!! | GAGTTTTGTGGTTGTTACGG+TGG | + | chr8.3:81206262-81206281 | None:intergenic | 45.0% |
!! | GATTCATTTTGATGCGCGGT+TGG | + | chr8.3:81206396-81206415 | None:intergenic | 45.0% |
!! | TTTGATGCCGGTTCACTTGA+AGG | - | chr8.3:81207244-81207263 | MS.gene91781:intron | 45.0% |
!! | TTTAATCATATATTTAAATT+GGG | - | chr8.3:81208410-81208429 | MS.gene91781:intron | 5.0% |
!!! | TTTTAATCATATATTTAAAT+TGG | - | chr8.3:81208409-81208428 | MS.gene91781:intron | 5.0% |
AAACGGAACGTGAGGAGGTT+CGG | - | chr8.3:81206655-81206674 | MS.gene91781:CDS | 50.0% | |
AAAGAGCCTCTGCTCCACTT+TGG | - | chr8.3:81207279-81207298 | MS.gene91781:intron | 50.0% | |
AAAGTGGAGCAGAGGCTCTT+TGG | + | chr8.3:81207280-81207299 | None:intergenic | 50.0% | |
AACACGTCGCCGGAAAATTC+CGG | - | chr8.3:81206296-81206315 | MS.gene91781:CDS | 50.0% | |
AATGAGTCGAGTAGGGTGAG+TGG | - | chr8.3:81207758-81207777 | MS.gene91781:intron | 50.0% | |
ACTACCTCAGCTGCCATCAA+TGG | - | chr8.3:81208233-81208252 | MS.gene91781:intron | 50.0% | |
ATTGGAAACGGAACGTGAGG+AGG | - | chr8.3:81206650-81206669 | MS.gene91781:CDS | 50.0% | |
CAAGTGAACCGGCATCAAAC+CGG | + | chr8.3:81207243-81207262 | None:intergenic | 50.0% | |
CAGAGTGAAGAATGCAAGGG+AGG | - | chr8.3:81208125-81208144 | MS.gene91781:CDS | 50.0% | |
CAGCTGCCATCAATGGTCTT+AGG | - | chr8.3:81208240-81208259 | MS.gene91781:intron | 50.0% | |
CAGTTCGGAAACTCGCTTCT+CGG | + | chr8.3:81206366-81206385 | None:intergenic | 50.0% | |
CATCTCCGATAACCGATCTC+CGG | + | chr8.3:81206889-81206908 | None:intergenic | 50.0% | |
GAATTTGGAGGAGAAGGAGG+AGG | + | chr8.3:81206465-81206484 | None:intergenic | 50.0% | |
GCGGTTGGAATGAACCAGTT+CGG | + | chr8.3:81206381-81206400 | None:intergenic | 50.0% | |
TCGACAACGAAGAAACGGTG+CGG | - | chr8.3:81206022-81206041 | MS.gene91781:CDS | 50.0% | |
TCGATTGGAAACGGAACGTG+AGG | - | chr8.3:81206647-81206666 | MS.gene91781:CDS | 50.0% | |
TCGGAATTTGGAGGAGAAGG+AGG | + | chr8.3:81206468-81206487 | None:intergenic | 50.0% | |
TGTAACTCTCTTCGCCTCAC+CGG | - | chr8.3:81206123-81206142 | MS.gene91781:CDS | 50.0% | |
TTGGACCTCAAAGCCACCAT+TGG | - | chr8.3:81207207-81207226 | MS.gene91781:intron | 50.0% | |
TTTGTGGTTGTTACGGTGGC+TGG | + | chr8.3:81206258-81206277 | None:intergenic | 50.0% | |
! | AACTGCCAATGGTGGCTTTG+AGG | + | chr8.3:81207215-81207234 | None:intergenic | 50.0% |
! | AAGACCATTGATGGCAGCTG+AGG | + | chr8.3:81208240-81208259 | None:intergenic | 50.0% |
! | AAGCGACAGTGTCTGGAACA+CGG | + | chr8.3:81209792-81209811 | None:intergenic | 50.0% |
! | AGTGTCTGGAACACGGTCAA+GGG | + | chr8.3:81209785-81209804 | None:intergenic | 50.0% |
! | TGTTCCAGACACTGTCGCTT+CGG | - | chr8.3:81209792-81209811 | MS.gene91781:CDS | 50.0% |
!! | AGGAGGTTCGGTGTAGTGAT+TGG | - | chr8.3:81206667-81206686 | MS.gene91781:CDS | 50.0% |
!! | CAGTTTCTGAAACACGTCGC+CGG | - | chr8.3:81206286-81206305 | MS.gene91781:CDS | 50.0% |
!! | GAATTTTGAGAAAGCGGCGG+TGG | - | chr8.3:81206863-81206882 | MS.gene91781:intron | 50.0% |
!! | GGAGGTTCGGTGTAGTGATT+GGG | - | chr8.3:81206668-81206687 | MS.gene91781:CDS | 50.0% |
!! | TTTGGACCGGCTTTTGGCAT+GGG | - | chr8.3:81207297-81207316 | MS.gene91781:intron | 50.0% |
ACAACGAAGAAACGGTGCGG+CGG | - | chr8.3:81206025-81206044 | MS.gene91781:CDS | 55.0% | |
ACCTCCTCGTCTTTCCTCAC+CGG | + | chr8.3:81206780-81206799 | None:intergenic | 55.0% | |
AGTCGAGTAGGGTGAGTGGA+TGG | - | chr8.3:81207762-81207781 | MS.gene91781:intron | 55.0% | |
CGAGAAGCGAGTTTCCGAAC+TGG | - | chr8.3:81206364-81206383 | MS.gene91781:CDS | 55.0% | |
CTGCTTCCTTCATGAGACGG+CGG | + | chr8.3:81206062-81206081 | None:intergenic | 55.0% | |
GAAAACGGCGGGAATGTCGT+CGG | + | chr8.3:81206193-81206212 | None:intergenic | 55.0% | |
TCACCGCCGGCAACAAATTC+CGG | + | chr8.3:81206753-81206772 | None:intergenic | 55.0% | |
TGCCAAAAGCCGGTCCAAAG+TGG | + | chr8.3:81207296-81207315 | None:intergenic | 55.0% | |
! | CAGTGTCTGGAACACGGTCA+AGG | + | chr8.3:81209786-81209805 | None:intergenic | 55.0% |
!! | CTCCACTTTGGACCGGCTTT+TGG | - | chr8.3:81207291-81207310 | MS.gene91781:intron | 55.0% |
!! | CTTTGGACCGGCTTTTGGCA+TGG | - | chr8.3:81207296-81207315 | MS.gene91781:intron | 55.0% |
!! | GGTTCGGTGTAGTGATTGGG+AGG | - | chr8.3:81206671-81206690 | MS.gene91781:CDS | 55.0% |
!! | TCACCGGAATTTGTTGCCGG+CGG | - | chr8.3:81206747-81206766 | MS.gene91781:CDS | 55.0% |
!! | TGCCGGTTCACTTGAAGGAC+CGG | - | chr8.3:81207249-81207268 | MS.gene91781:intron | 55.0% |
ATGTCGTCGGAGACAGCGAG+AGG | + | chr8.3:81206180-81206199 | None:intergenic | 60.0% | |
GCCCGGTCCTTCAAGTGAAC+CGG | + | chr8.3:81207254-81207273 | None:intergenic | 60.0% | |
GCCTCTGCTCCACTTTGGAC+CGG | - | chr8.3:81207284-81207303 | MS.gene91781:intron | 60.0% | |
GCTTCCGAAGCGACAGTGTC+TGG | + | chr8.3:81209799-81209818 | None:intergenic | 60.0% | |
GGAGACAGCGAGAGGTTCAC+CGG | + | chr8.3:81206172-81206191 | None:intergenic | 60.0% | |
GGTGGCCGGAGATCGGTTAT+CGG | - | chr8.3:81206881-81206900 | MS.gene91781:intron | 60.0% | |
GGTTCACTTGAAGGACCGGG+CGG | - | chr8.3:81207253-81207272 | MS.gene91781:intron | 60.0% | |
GGTTCCGGTGAGGAAAGACG+AGG | - | chr8.3:81206773-81206792 | MS.gene91781:CDS | 60.0% | |
GTTGTTACGGTGGCTGGACG+AGG | + | chr8.3:81206252-81206271 | None:intergenic | 60.0% | |
TCCGGTGAGGAAAGACGAGG+AGG | - | chr8.3:81206776-81206795 | MS.gene91781:CDS | 60.0% | |
TCGGCGGTTGAGAACGTTGC+CGG | + | chr8.3:81206497-81206516 | None:intergenic | 60.0% | |
TTACGCTCGCCACTACCTCG+CGG | - | chr8.3:81206083-81206102 | MS.gene91781:CDS | 60.0% | |
TTTGAGAAAGCGGCGGTGGC+CGG | - | chr8.3:81206867-81206886 | MS.gene91781:intron | 60.0% | |
! | GAAGGTGGAGAGTGCGGAAC+CGG | + | chr8.3:81206145-81206164 | None:intergenic | 60.0% |
! | GCCGGTTCACTTGAAGGACC+GGG | - | chr8.3:81207250-81207269 | MS.gene91781:intron | 60.0% |
!! | GGAATTTGTTGCCGGCGGTG+AGG | - | chr8.3:81206752-81206771 | MS.gene91781:CDS | 60.0% |
CAGAGGCTCTTTGGACCGCC+CGG | + | chr8.3:81207271-81207290 | None:intergenic | 65.0% | |
GACAGCGAGAGGTTCACCGG+CGG | + | chr8.3:81206169-81206188 | None:intergenic | 65.0% | |
GCCGGTCCAAAGTGGAGCAG+AGG | + | chr8.3:81207288-81207307 | None:intergenic | 65.0% | |
GTTACGGTGGCTGGACGAGG+AGG | + | chr8.3:81206249-81206268 | None:intergenic | 65.0% | |
TGTTGCCGGCGGTGAGGTTC+CGG | - | chr8.3:81206758-81206777 | MS.gene91781:CDS | 65.0% | |
! | TGGAGAGTGCGGAACCGGTG+AGG | + | chr8.3:81206140-81206159 | None:intergenic | 65.0% |
!! | AGAGCGCCGCCGTCTCATGA+AGG | - | chr8.3:81206053-81206072 | MS.gene91781:CDS | 65.0% |
AAGCGGCGGTGGCCGGAGAT+CGG | - | chr8.3:81206874-81206893 | MS.gene91781:intron | 70.0% | |
AATCAGAGTGCGCCGCCGCG+AGG | + | chr8.3:81206101-81206120 | None:intergenic | 70.0% | |
ACGGTGGCTGGACGAGGAGG+TGG | + | chr8.3:81206246-81206265 | None:intergenic | 70.0% | |
AGGTTCACCGGCGGCGAAGG+TGG | + | chr8.3:81206160-81206179 | None:intergenic | 70.0% | |
CCTCACCGGAACCTCACCGC+CGG | + | chr8.3:81206766-81206785 | None:intergenic | 70.0% | |
GAGAGGTTCACCGGCGGCGA+AGG | + | chr8.3:81206163-81206182 | None:intergenic | 70.0% | |
GCACTCTCCACCTTCGCCGC+CGG | - | chr8.3:81206150-81206169 | MS.gene91781:CDS | 70.0% | |
GGCGGCGAAGGTGGAGAGTG+CGG | + | chr8.3:81206151-81206170 | None:intergenic | 70.0% | |
GTGGCTGGACGAGGAGGTGG+CGG | + | chr8.3:81206243-81206262 | None:intergenic | 70.0% | |
AGTGCGCCGCCGCGAGGTAG+TGG | + | chr8.3:81206095-81206114 | None:intergenic | 75.0% | |
CCGGCGGTGAGGTTCCGGTG+AGG | - | chr8.3:81206763-81206782 | MS.gene91781:CDS | 75.0% | |
CGCTCGCCACTACCTCGCGG+CGG | - | chr8.3:81206086-81206105 | MS.gene91781:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 81206000 | 81210254 | 81206000 | ID=MS.gene91781 |
chr8.3 | mRNA | 81206000 | 81210254 | 81206000 | ID=MS.gene91781.t1;Parent=MS.gene91781 |
chr8.3 | exon | 81209297 | 81210254 | 81209297 | ID=MS.gene91781.t1.exon1;Parent=MS.gene91781.t1 |
chr8.3 | CDS | 81209297 | 81210254 | 81209297 | ID=cds.MS.gene91781.t1;Parent=MS.gene91781.t1 |
chr8.3 | exon | 81208909 | 81209093 | 81208909 | ID=MS.gene91781.t1.exon2;Parent=MS.gene91781.t1 |
chr8.3 | CDS | 81208909 | 81209093 | 81208909 | ID=cds.MS.gene91781.t1;Parent=MS.gene91781.t1 |
chr8.3 | exon | 81207951 | 81208177 | 81207951 | ID=MS.gene91781.t1.exon3;Parent=MS.gene91781.t1 |
chr8.3 | CDS | 81207951 | 81208177 | 81207951 | ID=cds.MS.gene91781.t1;Parent=MS.gene91781.t1 |
chr8.3 | exon | 81206000 | 81206801 | 81206000 | ID=MS.gene91781.t1.exon4;Parent=MS.gene91781.t1 |
chr8.3 | CDS | 81206000 | 81206801 | 81206000 | ID=cds.MS.gene91781.t1;Parent=MS.gene91781.t1 |
Gene Sequence |
Protein sequence |