AlfalfaGEDB | MS.gene71698

M. sativa cultivar XinJiangDaYe / MS.gene71698

KEGG: K14505
GO: GO:0005575 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0110165
PFAM: PF00134.26 PF02984.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71698.t1	CAA61334.1	99.4	320	2	0	5	324	67	386	2.10E-176	628.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71698.t1	P42753	57.0	272	97	5	17	277	63	325	3.6e-73	276.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71698.t1	Q40338	99.4	320	2	0	5	324	67	386	1.5e-176	628.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049418	MS.gene71698	0.834296	3.25E-56	-1.69E-46
MS.gene049660	MS.gene71698	0.844423	7.63E-59	-1.69E-46
MS.gene04985	MS.gene71698	0.832959	7.02E-56	-1.69E-46
MS.gene049989	MS.gene71698	0.85951	3.94E-63	-1.69E-46
MS.gene050297	MS.gene71698	0.866339	3.06E-65	-1.69E-46
MS.gene050310	MS.gene71698	0.828887	7.00E-55	-1.69E-46
MS.gene05054	MS.gene71698	0.847847	8.92E-60	-1.69E-46
MS.gene050648	MS.gene71698	0.820207	7.75E-53	-1.69E-46
MS.gene051067	MS.gene71698	0.849539	3.03E-60	-1.69E-46
MS.gene051094	MS.gene71698	0.807045	6.12E-50	-1.69E-46
MS.gene051478	MS.gene71698	0.815804	7.66E-52	-1.69E-46
MS.gene051648	MS.gene71698	0.853625	2.11E-61	-1.69E-46
MS.gene051660	MS.gene71698	0.80743	5.08E-50	-1.69E-46
MS.gene052150	MS.gene71698	0.813541	2.43E-51	-1.69E-46
MS.gene052151	MS.gene71698	0.816092	6.61E-52	-1.69E-46
MS.gene053144	MS.gene71698	0.80052	1.39E-48	-1.69E-46
MS.gene053348	MS.gene71698	0.817669	2.92E-52	-1.69E-46
MS.gene053416	MS.gene71698	0.81622	6.19E-52	-1.69E-46
MS.gene053417	MS.gene71698	0.812574	3.96E-51	-1.69E-46
MS.gene053536	MS.gene71698	0.86956	2.83E-66	-1.69E-46
MS.gene053538	MS.gene71698	0.870497	1.40E-66	-1.69E-46
MS.gene054643	MS.gene71698	0.81951	1.12E-52	-1.69E-46
MS.gene054999	MS.gene71698	0.867275	1.54E-65	-1.69E-46
MS.gene055381	MS.gene71698	0.814623	1.40E-51	-1.69E-46
MS.gene055411	MS.gene71698	0.812472	4.17E-51	-1.69E-46
MS.gene055537	MS.gene71698	0.807939	3.96E-50	-1.69E-46
MS.gene055764	MS.gene71698	0.845998	2.86E-59	-1.69E-46
MS.gene056042	MS.gene71698	0.828247	1.00E-54	-1.69E-46
MS.gene056169	MS.gene71698	0.841816	3.78E-58	-1.69E-46
MS.gene056228	MS.gene71698	0.841942	3.50E-58	-1.69E-46
MS.gene056526	MS.gene71698	0.827952	1.18E-54	-1.69E-46
MS.gene057004	MS.gene71698	0.814271	1.68E-51	-1.69E-46
MS.gene057082	MS.gene71698	0.810924	9.05E-51	-1.69E-46
MS.gene058196	MS.gene71698	0.812758	3.61E-51	-1.69E-46
MS.gene058197	MS.gene71698	0.854368	1.29E-61	-1.69E-46
MS.gene058198	MS.gene71698	0.851173	1.05E-60	-1.69E-46
MS.gene058210	MS.gene71698	0.806551	7.79E-50	-1.69E-46
MS.gene058823	MS.gene71698	0.827244	1.74E-54	-1.69E-46
MS.gene05894	MS.gene71698	0.830803	2.39E-55	-1.69E-46
MS.gene059300	MS.gene71698	0.87192	4.73E-67	-1.69E-46
MS.gene059424	MS.gene71698	0.858392	8.50E-63	-1.69E-46
MS.gene060473	MS.gene71698	0.813347	2.68E-51	-1.69E-46
MS.gene060492	MS.gene71698	0.844862	5.81E-59	-1.69E-46
MS.gene060565	MS.gene71698	0.810538	1.10E-50	-1.69E-46
MS.gene06057	MS.gene71698	0.870822	1.09E-66	-1.69E-46
MS.gene061260	MS.gene71698	0.808429	3.11E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene44271	MS.gene71698	PPI
MS.gene71698	MS.gene48441	PPI
MS.gene020406	MS.gene71698	PPI
MS.gene86240	MS.gene71698	PPI
MS.gene29142	MS.gene71698	PPI
MS.gene71698	MS.gene78707	PPI
MS.gene013042	MS.gene71698	PPI
MS.gene71698	MS.gene027748	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71698.t1	MTR_1g107535	96.262	321	11	1	5	324	64	384	0.0	638
MS.gene71698.t1	MTR_4g094942	53.918	319	136	5	5	318	43	355	8.24e-114	334
MS.gene71698.t1	MTR_3g102310	57.516	306	115	8	5	303	47	344	3.29e-111	327
MS.gene71698.t1	MTR_5g032550	36.604	265	153	3	48	308	92	345	1.11e-47	164
MS.gene71698.t1	MTR_4g080990	33.460	263	162	7	14	271	59	313	1.36e-45	158
MS.gene71698.t1	MTR_3g100710	35.433	254	152	5	34	280	82	330	1.37e-42	150
MS.gene71698.t1	MTR_5g032550	42.690	171	98	0	48	218	92	262	7.33e-42	146
MS.gene71698.t1	MTR_5g035360	38.839	224	126	2	36	250	56	277	1.33e-39	142
MS.gene71698.t1	MTR_8g063120	38.208	212	129	1	45	256	91	300	7.72e-39	140
MS.gene71698.t1	MTR_8g063120	40.462	173	94	1	34	197	71	243	6.63e-36	131
MS.gene71698.t1	MTR_5g065830	31.890	254	164	3	46	294	86	335	8.49e-34	127
MS.gene71698.t1	MTR_8g068950	33.047	233	136	6	48	270	108	330	9.86e-30	117
MS.gene71698.t1	MTR_5g015670	33.663	202	123	5	44	242	99	292	1.53e-29	115
MS.gene71698.t1	MTR_3g103080	40.523	153	87	2	12	164	34	182	4.77e-29	114
MS.gene71698.t1	MTR_3g100710	33.333	201	123	4	86	280	106	301	3.43e-25	103
MS.gene71698.t1	MTR_2g011500	32.484	157	100	2	50	206	86	236	2.12e-22	95.5
MS.gene71698.t1	MTR_2g089490	30.159	252	147	9	63	299	64	301	2.95e-22	95.1
MS.gene71698.t1	MTR_2g089490	30.120	249	148	8	63	299	64	298	6.22e-22	94.4
MS.gene71698.t1	MTR_4g095790	30.151	199	135	4	11	206	31	228	3.30e-14	72.4
MS.gene71698.t1	MTR_3g102530	32.484	157	95	6	52	204	124	273	7.20e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71698.t1	AT4G34160	60.996	241	85	2	5	245	51	282	1.23e-98	296
MS.gene71698.t1	AT5G67260	48.726	314	142	6	13	320	65	365	1.37e-92	280
MS.gene71698.t1	AT5G67260	49.673	306	135	6	13	312	65	357	2.89e-90	275
MS.gene71698.t1	AT3G50070	45.538	325	163	5	1	321	45	359	4.93e-88	268
MS.gene71698.t1	AT2G22490	35.931	231	135	3	48	270	97	322	5.99e-44	154
MS.gene71698.t1	AT2G22490	35.776	232	135	4	48	270	97	323	3.16e-42	150
MS.gene71698.t1	AT1G70210	38.424	203	125	0	48	250	82	284	5.57e-41	146
MS.gene71698.t1	AT5G65420	48.718	117	60	0	48	164	78	194	1.68e-35	130
MS.gene71698.t1	AT5G65420	49.138	116	59	0	48	163	78	193	1.91e-35	129
MS.gene71698.t1	AT5G65420	49.138	116	59	0	48	163	78	193	4.03e-35	130
MS.gene71698.t1	AT5G65420	45.238	126	59	1	48	163	78	203	5.99e-33	124
MS.gene71698.t1	AT5G10440	35.577	208	132	2	1	206	21	228	1.44e-30	117
MS.gene71698.t1	AT5G10440	39.024	164	99	1	1	163	21	184	3.82e-30	114
MS.gene71698.t1	AT4G03270	31.164	292	173	10	8	287	15	290	1.72e-24	101
MS.gene71698.t1	AT4G03270	31.164	292	172	11	8	287	15	289	8.00e-23	96.7
MS.gene71698.t1	AT4G37630	36.806	144	82	3	29	164	45	187	1.50e-21	92.4
MS.gene71698.t1	AT4G37630	36.986	146	81	4	29	164	45	189	5.25e-21	90.9
MS.gene71698.t1	AT4G37630	36.986	146	81	4	29	164	45	189	1.36e-20	90.9
MS.gene71698.t1	AT5G02110	25.180	278	186	8	44	315	74	335	1.12e-19	88.6
MS.gene71698.t1	AT5G02110	25.541	231	150	8	91	315	92	306	5.39e-15	74.7

Find 42 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTAAAGTCAATGCTCATTA+TGG	0.232843	1.1:-77261936	MS.gene71698:CDS
ATCTTCATTGGGAGTTTCTT+AGG	0.261503	1.1:-77261524	MS.gene71698:CDS
TGAATTTGTCACCGATTAAC+AGG	0.270558	1.1:-77260705	MS.gene71698:CDS
GATTGAAAACTAATCTTCAT+TGG	0.293518	1.1:-77261536	MS.gene71698:CDS
CTTACAAATGCAAATAATTA+TGG	0.328803	1.1:-77260886	MS.gene71698:CDS
TTGCTGTTAACTATCTTGAT+AGG	0.355913	1.1:-77261890	MS.gene71698:CDS
TTTATAGATTCAAGATTTGT+TGG	0.378968	1.1:-77261300	MS.gene71698:intron
TTCTTGTTGAGTTATCTCTT+TGG	0.382076	1.1:+77262037	None:intergenic
CACGTCGTGAAGCCGTTGAA+TGG	0.426745	1.1:-77261962	MS.gene71698:CDS
TGATTCTGTCAACACTGAAA+TGG	0.427443	1.1:-77261614	MS.gene71698:CDS
TTCTTGGTCTTCTTAAACAC+AGG	0.430266	1.1:+77260742	None:intergenic
ATTGAAAACTAATCTTCATT+GGG	0.430502	1.1:-77261535	MS.gene71698:CDS
TTCTAGATCACATTATAAGA+AGG	0.447293	1.1:-77261563	MS.gene71698:CDS
CCGACAATGACCCTGTTAAT+CGG	0.454527	1.1:+77260694	None:intergenic
TATCATCACTCTGTTCAATC+TGG	0.455099	1.1:+77261229	None:intergenic
GATCACATTATAAGAAGGCT+TGG	0.460558	1.1:-77261558	MS.gene71698:CDS
ATTACGCCACTTGGACTACC+AGG	0.474746	1.1:+77260838	None:intergenic
AGATACTAAATATGTGTTTG+AGG	0.495892	1.1:-77261664	MS.gene71698:CDS
GACTTTAAGCATCCATTCAA+CGG	0.507804	1.1:+77261950	None:intergenic
AGAAAAGAGTGTGTTGTCAC+TGG	0.519215	1.1:+77261582	None:intergenic
GGCAAAGACTATTCAGAGAA+TGG	0.519295	1.1:-77261643	MS.gene71698:CDS
ACAGCATCAATTACGCCACT+TGG	0.527358	1.1:+77260829	None:intergenic
CCGATTAACAGGGTCATTGT+CGG	0.532014	1.1:-77260694	MS.gene71698:CDS
TTTAAGAAGACCAAGAATCA+AGG	0.533821	1.1:-77260736	MS.gene71698:CDS
ATTGAACAGAGTGATGATAA+TGG	0.537100	1.1:-77261225	MS.gene71698:CDS
CTGATGGTTCTAACGATTCG+TGG	0.539073	1.1:-77260798	MS.gene71698:CDS
TGGTTGTGTTCCTTCTGTGT+TGG	0.540643	1.1:-77261280	MS.gene71698:CDS
CATTCAACGGCTTCACGACG+TGG	0.556963	1.1:+77261963	None:intergenic
CGAAAATATGAAGAAATCCC+TGG	0.561909	1.1:-77260856	MS.gene71698:CDS
AACATGCAACATTGTAGCAG+TGG	0.604318	1.1:+77261257	None:intergenic
CTTCTTAAACACAGGCTCTG+AGG	0.608564	1.1:+77260750	None:intergenic
ACTTGAAGGTCTAAGAGAAG+AGG	0.611584	1.1:+77261765	None:intergenic
GTAGCAGTGGCCAACACAGA+AGG	0.618074	1.1:+77261270	None:intergenic
TTCTAACGATTCGTGGACAG+TGG	0.621696	1.1:-77260791	MS.gene71698:CDS
TCTAACGATTCGTGGACAGT+GGG	0.629045	1.1:-77260790	MS.gene71698:CDS
GCAACAAGCTGAATCATCCA+TGG	0.629983	1.1:+77261834	None:intergenic
TAATGTTCTCAAAATCAGCA+AGG	0.638487	1.1:-77261178	MS.gene71698:intron
GAATTTGTCACCGATTAACA+GGG	0.642593	1.1:-77260704	MS.gene71698:CDS
TTACGCCACTTGGACTACCA+GGG	0.660070	1.1:+77260839	None:intergenic
GAAATCCCTGGTAGTCCAAG+TGG	0.669163	1.1:-77260844	MS.gene71698:CDS
ACAGAGTGATGATAATGGTG+TGG	0.694988	1.1:-77261220	MS.gene71698:CDS
TCAACAAGAAACATATTACG+AGG	0.716642	1.1:-77262024	MS.gene71698:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATTAAACATAAAGTATTA+AGG	+	chr1.1:77261912-77261931	None:intergenic	10.0%
!!	AACAACAAACTATGATATAT+TGG	-	chr1.1:77260896-77260915	MS.gene71698:CDS	20.0%
!!	AATTTAATAGAACTACTCAA+TGG	-	chr1.1:77261946-77261965	MS.gene71698:CDS	20.0%
!!	ATTGAAAACTAATCTTCATT+GGG	-	chr1.1:77261499-77261518	MS.gene71698:CDS	20.0%
!!	ATTTAATAGAACTACTCAAT+GGG	-	chr1.1:77261947-77261966	MS.gene71698:CDS	20.0%
!!	CAAAAACAAACATAAGAAAA+AGG	+	chr1.1:77261339-77261358	None:intergenic	20.0%
!!	CTTACAAATGCAAATAATTA+TGG	-	chr1.1:77262148-77262167	MS.gene71698:intron	20.0%
!!	CTTTGTTCATTATAAAAAGA+AGG	+	chr1.1:77260697-77260716	None:intergenic	20.0%
!!	TTTATAGATTCAAGATTTGT+TGG	-	chr1.1:77261734-77261753	MS.gene71698:intron	20.0%
!!!	CTTATGTTTGTTTTTGTTAA+AGG	-	chr1.1:77261343-77261362	MS.gene71698:intron	20.0%
!!!	CTTCTTTTTATAATGAACAA+AGG	-	chr1.1:77260695-77260714	MS.gene71698:CDS	20.0%
!	AGATACTAAATATGTGTTTG+AGG	-	chr1.1:77261370-77261389	MS.gene71698:intron	25.0%
!	GATTGAAAACTAATCTTCAT+TGG	-	chr1.1:77261498-77261517	MS.gene71698:CDS	25.0%
!	TAAACAAAAAACACATGCAA+AGG	+	chr1.1:77262089-77262108	None:intergenic	25.0%
!	TTCTAGATCACATTATAAGA+AGG	-	chr1.1:77261471-77261490	MS.gene71698:intron	25.0%
!!!	TGAAAGAGTACTAAAAATGT+TGG	+	chr1.1:77261577-77261596	None:intergenic	25.0%
	ACTGTGATGAAGAAGAAAAA+TGG	-	chr1.1:77260820-77260839	MS.gene71698:CDS	30.0%
	ATTGAACAGAGTGATGATAA+TGG	-	chr1.1:77261809-77261828	MS.gene71698:CDS	30.0%
	ATTTCCAAAAAGAGAAACCA+TGG	-	chr1.1:77261183-77261202	MS.gene71698:CDS	30.0%
	CTGTGATGAAGAAGAAAAAT+GGG	-	chr1.1:77260821-77260840	MS.gene71698:CDS	30.0%
	CTTAAAGTCAATGCTCATTA+TGG	-	chr1.1:77261098-77261117	MS.gene71698:intron	30.0%
	TAACAAAAGCAGAGGTAAAA+GGG	+	chr1.1:77260931-77260950	None:intergenic	30.0%
	TAATGTTCTCAAAATCAGCA+AGG	-	chr1.1:77261856-77261875	MS.gene71698:CDS	30.0%
	TCAACAAGAAACATATTACG+AGG	-	chr1.1:77261010-77261029	MS.gene71698:intron	30.0%
	TTAGAAGATAACGTACTTGA+AGG	+	chr1.1:77261286-77261305	None:intergenic	30.0%
	TTCTTGTTGAGTTATCTCTT+TGG	+	chr1.1:77261000-77261019	None:intergenic	30.0%
	TTTAAGAAGACCAAGAATCA+AGG	-	chr1.1:77262298-77262317	MS.gene71698:intron	30.0%
	TTTCAGTTGCACATCATTAT+TGG	-	chr1.1:77261592-77261611	MS.gene71698:CDS	30.0%
!	CATATTTTGTCCTTGATTCT+TGG	+	chr1.1:77262311-77262330	None:intergenic	30.0%
!	CTTCTTCTATCTGTACTTTT+AGG	-	chr1.1:77261545-77261564	MS.gene71698:CDS	30.0%
!	TTGCTGTTAACTATCTTGAT+AGG	-	chr1.1:77261144-77261163	MS.gene71698:intron	30.0%
!!	ATGGTTTCTCTTTTTGGAAA+TGG	+	chr1.1:77261184-77261203	None:intergenic	30.0%
!!!	TGCATGTGTTTTTTGTTTAC+AGG	-	chr1.1:77262090-77262109	MS.gene71698:intron	30.0%
	ATCTTCATTGGGAGTTTCTT+AGG	-	chr1.1:77261510-77261529	MS.gene71698:CDS	35.0%
	ATCTTCTTCAGTGAAGAAGA+GGG	+	chr1.1:77260729-77260748	None:intergenic	35.0%
	CGAAAATATGAAGAAATCCC+TGG	-	chr1.1:77262178-77262197	MS.gene71698:intron	35.0%
	CTAACAAAAGCAGAGGTAAA+AGG	+	chr1.1:77260932-77260951	None:intergenic	35.0%
	GACTTTAAGCATCCATTCAA+CGG	+	chr1.1:77261087-77261106	None:intergenic	35.0%
	GATCACATTATAAGAAGGCT+TGG	-	chr1.1:77261476-77261495	MS.gene71698:intron	35.0%
	GCTCATACACAATACACATA+TGG	+	chr1.1:77261974-77261993	None:intergenic	35.0%
	TATCATCACTCTGTTCAATC+TGG	+	chr1.1:77261808-77261827	None:intergenic	35.0%
	TGATTCTGTCAACACTGAAA+TGG	-	chr1.1:77261420-77261439	MS.gene71698:intron	35.0%
	TTCTGTTCTAACAAAAGCAG+AGG	+	chr1.1:77260939-77260958	None:intergenic	35.0%
!	AAATGGGAAGATGATGATGA+AGG	-	chr1.1:77260837-77260856	MS.gene71698:CDS	35.0%
!	AAGTGTGTTGTTGAAGTTGT+TGG	+	chr1.1:77260779-77260798	None:intergenic	35.0%
!	GAATTTGTCACCGATTAACA+GGG	-	chr1.1:77262330-77262349	MS.gene71698:intron	35.0%
!	TCATCCATGGTTTCTCTTTT+TGG	+	chr1.1:77261190-77261209	None:intergenic	35.0%
!	TGAATTTGTCACCGATTAAC+AGG	-	chr1.1:77262329-77262348	MS.gene71698:intron	35.0%
!	TTCTTGGTCTTCTTAAACAC+AGG	+	chr1.1:77262295-77262314	None:intergenic	35.0%
!!!	GATGCTGTTTTTAGTTCTGA+TGG	-	chr1.1:77262220-77262239	MS.gene71698:intron	35.0%
	AACATGCAACATTGTAGCAG+TGG	+	chr1.1:77261780-77261799	None:intergenic	40.0%
	ACTTGAAGGTCTAAGAGAAG+AGG	+	chr1.1:77261272-77261291	None:intergenic	40.0%
	CATCTTCTTCAGTGAAGAAG+AGG	+	chr1.1:77260730-77260749	None:intergenic	40.0%
	CTCTTCTTCACTGAAGAAGA+TGG	-	chr1.1:77260728-77260747	MS.gene71698:CDS	40.0%
	GAAGGAGAAGTTGTAGATGA+AGG	-	chr1.1:77260855-77260874	MS.gene71698:CDS	40.0%
	GGCAAAGACTATTCAGAGAA+TGG	-	chr1.1:77261391-77261410	MS.gene71698:intron	40.0%
!	AGAAAAGAGTGTGTTGTCAC+TGG	+	chr1.1:77261455-77261474	None:intergenic	40.0%
!	GGTGATTGTGATGATGATGA+TGG	+	chr1.1:77260758-77260777	None:intergenic	40.0%
!!	ACAGAGTGATGATAATGGTG+TGG	-	chr1.1:77261814-77261833	MS.gene71698:CDS	40.0%
	ACAGCATCAATTACGCCACT+TGG	+	chr1.1:77262208-77262227	None:intergenic	45.0%
	CCGACAATGACCCTGTTAAT+CGG	+	chr1.1:77262343-77262362	None:intergenic	45.0%
	CCGATTAACAGGGTCATTGT+CGG	-	chr1.1:77262340-77262359	MS.gene71698:intron	45.0%
	CTTCTTAAACACAGGCTCTG+AGG	+	chr1.1:77262287-77262306	None:intergenic	45.0%
	GCAACAAGCTGAATCATCCA+TGG	+	chr1.1:77261203-77261222	None:intergenic	45.0%
	TCTAACGATTCGTGGACAGT+GGG	-	chr1.1:77262244-77262263	MS.gene71698:intron	45.0%
	TGGTTGTGTTCCTTCTGTGT+TGG	-	chr1.1:77261754-77261773	MS.gene71698:intron	45.0%
	TTCTAACGATTCGTGGACAG+TGG	-	chr1.1:77262243-77262262	MS.gene71698:intron	45.0%
!!	CTGATGGTTCTAACGATTCG+TGG	-	chr1.1:77262236-77262255	MS.gene71698:intron	45.0%
	ATTACGCCACTTGGACTACC+AGG	+	chr1.1:77262199-77262218	None:intergenic	50.0%
	GAAATCCCTGGTAGTCCAAG+TGG	-	chr1.1:77262190-77262209	MS.gene71698:intron	50.0%
	GCAAGGTCAGTAGTAGTAGC+TGG	-	chr1.1:77261873-77261892	MS.gene71698:CDS	50.0%
	TTACGCCACTTGGACTACCA+GGG	+	chr1.1:77262198-77262217	None:intergenic	50.0%
!	TCAGTGAAGAAGAGGGTGTG+TGG	+	chr1.1:77260722-77260741	None:intergenic	50.0%
	CACGTCGTGAAGCCGTTGAA+TGG	-	chr1.1:77261072-77261091	MS.gene71698:intron	55.0%
	CATTCAACGGCTTCACGACG+TGG	+	chr1.1:77261074-77261093	None:intergenic	55.0%
	GTAGCAGTGGCCAACACAGA+AGG	+	chr1.1:77261767-77261786	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	77260666	77262390	77260666	ID=MS.gene71698
chr1.1	mRNA	77260666	77262390	77260666	ID=MS.gene71698.t1;Parent=MS.gene71698
chr1.1	exon	77262372	77262390	77262372	ID=MS.gene71698.t1.exon1;Parent=MS.gene71698.t1
chr1.1	CDS	77262372	77262390	77262372	ID=cds.MS.gene71698.t1;Parent=MS.gene71698.t1
chr1.1	exon	77261767	77262104	77261767	ID=MS.gene71698.t1.exon2;Parent=MS.gene71698.t1
chr1.1	CDS	77261767	77262104	77261767	ID=cds.MS.gene71698.t1;Parent=MS.gene71698.t1
chr1.1	exon	77261490	77261691	77261490	ID=MS.gene71698.t1.exon3;Parent=MS.gene71698.t1
chr1.1	CDS	77261490	77261691	77261490	ID=cds.MS.gene71698.t1;Parent=MS.gene71698.t1
chr1.1	exon	77261179	77261315	77261179	ID=MS.gene71698.t1.exon4;Parent=MS.gene71698.t1
chr1.1	CDS	77261179	77261315	77261179	ID=cds.MS.gene71698.t1;Parent=MS.gene71698.t1
chr1.1	exon	77260666	77260944	77260666	ID=MS.gene71698.t1.exon5;Parent=MS.gene71698.t1
chr1.1	CDS	77260666	77260944	77260666	ID=cds.MS.gene71698.t1;Parent=MS.gene71698.t1

Gene Sequence

>MS.gene71698

ATGGATGTGAGACTCTTCAGTACTGTTTCCTTCTTTTTATAATGAACAAAGGACCACACACCCTCTTCTTCACTGAAGAAGATGGCTATCCATCATCATCATCACAATCACCAACAACTTCAACAACACACTTCTTCTCTTTTTGATGCACTTTACTGTGATGAAGAAGAAAAATGGGAAGATGATGATGAAGGAGAAGTTGTAGATGAAGGAGAACAAAGTGATGTCACAACAACAAACTATGATATATTGGACTCTACTTCCCTTTTACCTCTGCTTTTGTTAGAACAGAACTTGTTCAATGAAGATGAAGAACTCAACACTCTTTTCTCCAAAGAGATAACTCAACAAGAAACATATTACGAGGATCTGAAAAATGTGATCAACTTTGACTCACTCTCTCAACCACGTCGTGAAGCCGTTGAATGGATGCTTAAAGTCAATGCTCATTATGGTTTCTCTGCTCTCACTGCAACACTTGCTGTTAACTATCTTGATAGGTTTCTTTTAAGCTTCCATTTCCAAAAAGAGAAACCATGGATGATTCAGCTTGTTGCTGTTACTTGCATCTCTTTAGCTGCTAAAGTTGAAGAAACTCAAGTTCCTCTTCTCTTAGACCTTCAAGTACGTTATCTTCTAAACTTAAAACATTCTATCATGTTCTGTTTTTCCTTTTTCTTATGTTTGTTTTTGTTAAAGGTGCAAGATACTAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTATTGATTCTGTCAACACTGAAATGGAAGATGCATCCAGTGACAACACACTCTTTTCTAGATCACATTATAAGAAGGCTTGGATTGAAAACTAATCTTCATTGGGAGTTTCTTAGGCGCTGTGAGAATCTTCTTCTATCTGTACTTTTAGGTAAGCACCAACATTTTTAGTACTCTTTCAGTTGCACATCATTATTGGTATTATTCACTACTTATTCAAAAACTTTATCTTCTTTTGCACAAGTACAAAAAAGAATATAAATAAATAAAGACAAAATGTTGATTTTCTTATGATTTGATTTTGTTATATGCATGTTGTTTATAGATTCAAGATTTGTTGGTTGTGTTCCTTCTGTGTTGGCCACTGCTACAATGTTGCATGTTATAGACCAGATTGAACAGAGTGATGATAATGGTGTGGATTACAAAAATCAGCTTCTTAATGTTCTCAAAATCAGCAAGGTCAGTAGTAGTAGCTGGATATATGTTCATGCCTTAATACTTTATGTTTAATTTAATACAAGTACTTTAATTTAATAGAACTACTCAATGGGACCATATGTGTATTGTGTATGAGCATCTTAGATTAGAAATGAATAAATAAATGCTGACAATAGCATTATTTAATGAACATGATAATAAGCACATGATTTGATACTAGTTATTTTTTCCTTTGCATGTGTTTTTTGTTTACAGGAGAAAGTTGATGAATGTTATAATGCGATTCTTCATCTTACAAATGCAAATAATTATGGTCATAAACGAAAATATGAAGAAATCCCTGGTAGTCCAAGTGGCGTAATTGATGCTGTTTTTAGTTCTGATGGTTCTAACGATTCGTGGACAGTGGGAGCATCATCATATTCAACCTCAGAGCCTGTGTTTAAGAAGACCAAGAATCAAGGACAAAATATGAATTTGTCACCGATTAACAGGGTCATTGTCGGAATTCTTGCCACTGCAACCTCTCCTTAA

Protein sequence

>MS.gene71698.t1

MDVRLFKQNLFNEDEELNTLFSKEITQQETYYEDLKNVINFDSLSQPRREAVEWMLKVNAHYGFSALTATLAVNYLDRFLLSFHFQKEKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLILSTLKWKMHPVTTHSFLDHIIRRLGLKTNLHWEFLRRCENLLLSVLLDSRFVGCVPSVLATATMLHVIDQIEQSDDNGVDYKNQLLNVLKISKEKVDECYNAILHLTNANNYGHKRKYEEIPGSPSGVIDAVFSSDGSNDSWTVGASSYSTSEPVFKKTKNQGQNMNLSPINRVIVGILATATSP