AlfalfaGEDB | MS.gene055848

M. sativa cultivar XinJiangDaYe / MS.gene055848

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055848.t1	KEH39089.1	80.4	280	50	3	1	276	1	279	5.40E-69	271.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055848.t1	A0A072VAM7	80.4	280	50	3	1	276	1	279	3.9e-69	271.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene053417	MS.gene055848	0.800293	1.54E-48	-1.69E-46
MS.gene055848	MS.gene068190	0.815113	1.09E-51	-1.69E-46
MS.gene055848	MS.gene24699	0.801098	1.06E-48	-1.69E-46
MS.gene055848	MS.gene71419	0.801926	7.15E-49	-1.69E-46
MS.gene055848	MS.gene99878	0.806916	6.52E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055848.t1	MTR_2g090150	90.000	280	23	3	1	276	1	279	1.96e-159	444
MS.gene055848.t1	MTR_3g083320	70.968	93	23	1	99	191	1	89	3.08e-36	125
MS.gene055848.t1	MTR_7g036835	79.630	54	10	1	108	161	17	69	1.75e-20	84.7
MS.gene055848.t1	MTR_4g046123	33.609	363	139	14	1	276	1	348	1.58e-16	78.6
MS.gene055848.t1	MTR_2g012750	30.743	296	154	12	1	276	1	265	7.15e-16	75.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055848.t1	AT1G11125	28.754	313	138	12	1	276	1	265	2.10e-13	68.9

Find 86 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTGTTTCTTGTGTCAAATT+TGG	0.226043	2.1:+11257115	None:intergenic
ACTTCATCTTCTCTTGTTTC+CGG	0.252016	2.1:+11256935	None:intergenic
ACTTGTTGGGGTTTGGAAAT+GGG	0.280815	2.1:+11257139	None:intergenic
AATGACCCAAATGCAAAATA+TGG	0.283691	2.1:-11257095	MS.gene055848:CDS
ATTTGGAACTTGTTGGGGTT+TGG	0.292399	2.1:+11257132	None:intergenic
CGGTACTCTCGCCGGAGATT+TGG	0.302379	2.1:+11256784	None:intergenic
AACTTGTTGGGGTTTGGAAA+TGG	0.304412	2.1:+11257138	None:intergenic
TACGAATCCGCATGTTTCTT+TGG	0.316210	2.1:-11256513	MS.gene055848:CDS
AACGATATGTGGTGGTGATT+TGG	0.343885	2.1:+11257207	None:intergenic
CGGCCGGCGGTTTCCGCCGC+CGG	0.348674	2.1:-11256582	MS.gene055848:CDS
GGTACTCTCGCCGGAGATTT+GGG	0.348832	2.1:+11256785	None:intergenic
TGTCAAATTTGGAACTTGTT+GGG	0.360443	2.1:+11257126	None:intergenic
CACGGTGGCGGTGGTGGTGG+TGG	0.363400	2.1:+11256958	None:intergenic
TTCTTCTCCGGTGGAATATC+CGG	0.377046	2.1:+11256764	None:intergenic
GGTGGCGGTGGTGGTGGTGG+TGG	0.381453	2.1:+11256961	None:intergenic
TTCCGGCACGGTGGCGGTGG+TGG	0.398698	2.1:+11256952	None:intergenic
GTGTCAAATTTGGAACTTGT+TGG	0.403696	2.1:+11257125	None:intergenic
CGGCACGGTGGCGGTGGTGG+TGG	0.420052	2.1:+11256955	None:intergenic
CCTCCGGCGGCGGAAACCGC+CGG	0.439730	2.1:+11256579	None:intergenic
GCGACGGCGGCCCAAATCTC+CGG	0.441324	2.1:-11256795	MS.gene055848:CDS
TGTGGTGGTGATTTGGATTG+TGG	0.451051	2.1:+11257214	None:intergenic
TCTTGTTTCCGGCACGGTGG+CGG	0.456666	2.1:+11256946	None:intergenic
TCAGAAGGTTCCTCCTCCAA+TGG	0.469389	2.1:+11257043	None:intergenic
AGGGAACTCAGAACAGGAAT+CGG	0.471506	2.1:-11256889	MS.gene055848:CDS
GGTGATTTGGATTGTGGTGA+TGG	0.471931	2.1:+11257220	None:intergenic
ATGACAGAAATTTCTTCAGA+AGG	0.481125	2.1:+11257028	None:intergenic
CACCACCACCGCCACCGTGC+CGG	0.484361	2.1:-11256954	MS.gene055848:CDS
ATCTTCTCTTGTTTCCGGCA+CGG	0.485510	2.1:+11256940	None:intergenic
TGTTTCCGGCACGGTGGCGG+TGG	0.486711	2.1:+11256949	None:intergenic
AAGGTGTTGGCCGGAGGTCA+AGG	0.493895	2.1:-11256673	MS.gene055848:CDS
TCAGAGAGGGAACTCAGAAC+AGG	0.499920	2.1:-11256895	MS.gene055848:CDS
GTAGTTGTCAAAGTGAGGTT+AGG	0.501052	2.1:-11256619	MS.gene055848:CDS
TCCTCAACAACCTCCGGCGG+CGG	0.503626	2.1:+11256569	None:intergenic
CAAATCTCCGGCGAGAGTAC+CGG	0.514735	2.1:-11256783	MS.gene055848:CDS
CGTAACTCCGGCGAAGGTGT+TGG	0.520879	2.1:-11256686	MS.gene055848:CDS
TCCACGGTCTGTTCGTCGGA+GGG	0.522580	2.1:-11256729	MS.gene055848:CDS
GTCAAATTTGGAACTTGTTG+GGG	0.523325	2.1:+11257127	None:intergenic
CAAGGTCACCGTCGTGTCAA+AGG	0.528505	2.1:-11256655	MS.gene055848:CDS
TGAGGTTAGGCAGACGGAAA+GGG	0.532958	2.1:-11256606	MS.gene055848:CDS
AGAAAATTGTGGCGGGTCCA+CGG	0.533098	2.1:-11256745	MS.gene055848:CDS
TCCGCCGCCGGAGGTTGTTG+AGG	0.533614	2.1:-11256570	MS.gene055848:CDS
CCTCCGGCCAACACCTTCGC+CGG	0.533909	2.1:+11256679	None:intergenic
GTGAGGTTAGGCAGACGGAA+AGG	0.535409	2.1:-11256607	MS.gene055848:CDS
AATCGTTCTTACAATGCTGA+TGG	0.537405	2.1:-11256839	MS.gene055848:CDS
GGAGTTACGCCGAAGACTAT+CGG	0.540409	2.1:+11256700	None:intergenic
CCGGCGGTTTCCGCCGCCGG+AGG	0.547088	2.1:-11256579	MS.gene055848:CDS
CTTCGGCGTAACTCCGGCGA+AGG	0.548353	2.1:-11256692	MS.gene055848:CDS
CACAAACGACGGCGTTTCAG+TGG	0.549619	2.1:-11256546	MS.gene055848:CDS
GTCCACGGTCTGTTCGTCGG+AGG	0.555800	2.1:-11256730	MS.gene055848:CDS
TCGGAGGGAGAGAGCGACGG+CGG	0.556404	2.1:-11256808	MS.gene055848:CDS
ACGACGGTGACCTTGACCTC+CGG	0.557299	2.1:+11256663	None:intergenic
ACTCCGGCGAAGGTGTTGGC+CGG	0.559360	2.1:-11256682	MS.gene055848:CDS
GATAGTCTTCGGCGTAACTC+CGG	0.559834	2.1:-11256698	MS.gene055848:CDS
TTTGTGTCCTCAACAACCTC+CGG	0.560377	2.1:+11256563	None:intergenic
GGCAGACGGAAAGGGACGGC+CGG	0.560488	2.1:-11256598	MS.gene055848:CDS
CGGGTCCACGGTCTGTTCGT+CGG	0.567627	2.1:-11256733	MS.gene055848:CDS
AGAACGATTCCTTGATGCAT+CGG	0.573616	2.1:+11256853	None:intergenic
AGACGGAAAGGGACGGCCGG+CGG	0.578890	2.1:-11256595	MS.gene055848:CDS
ATTTCAGAAACATGCAGTGT+AGG	0.580049	2.1:-11257007	MS.gene055848:CDS
ATCGTTCTTACAATGCTGAT+GGG	0.583369	2.1:-11256838	MS.gene055848:CDS
CCGTCGTGTCAAAGGACGGT+TGG	0.586196	2.1:-11256647	MS.gene055848:CDS
GAAGTCACTCCGATGCATCA+AGG	0.588487	2.1:-11256862	MS.gene055848:CDS
GGAATATCCGGTACTCTCGC+CGG	0.589435	2.1:+11256776	None:intergenic
CCGGAGAAGAAAATTGTGGC+GGG	0.593593	2.1:-11256752	MS.gene055848:CDS
GAGTCGGAGGGAGAGAGCGA+CGG	0.593818	2.1:-11256811	MS.gene055848:CDS
CCGGCGAAGGTGTTGGCCGG+AGG	0.605241	2.1:-11256679	MS.gene055848:CDS
TCAAAGTGAGGTTAGGCAGA+CGG	0.607147	2.1:-11256612	MS.gene055848:CDS
AATGCTGATGGGAATAGAGT+CGG	0.612964	2.1:-11256827	MS.gene055848:CDS
TCCCTCCGACGAACAGACCG+TGG	0.624591	2.1:+11256728	None:intergenic
AAGCAGTAGTTGTCAAAGTG+AGG	0.626893	2.1:-11256624	MS.gene055848:CDS
GTCACCGTCGTGTCAAAGGA+CGG	0.630090	2.1:-11256651	MS.gene055848:CDS
AAACGACGGCGTTTCAGTGG+AGG	0.631057	2.1:-11256543	MS.gene055848:CDS
AGTAAACGAAGGATCAGAGA+GGG	0.633490	2.1:-11256908	MS.gene055848:CDS
ACCGGAGAAGAAAATTGTGG+CGG	0.635392	2.1:-11256753	MS.gene055848:CDS
GTTAGGCAGACGGAAAGGGA+CGG	0.636235	2.1:-11256602	MS.gene055848:CDS
GCTGATGGGAATAGAGTCGG+AGG	0.641905	2.1:-11256824	MS.gene055848:CDS
GAGAGTACCGGATATTCCAC+CGG	0.658279	2.1:-11256771	MS.gene055848:CDS
GTGTCCTCAACAACCTCCGG+CGG	0.660506	2.1:+11256566	None:intergenic
CCAACCGTCCTTTGACACGA+CGG	0.663961	2.1:+11256647	None:intergenic
TTCTCTTGTTTCCGGCACGG+TGG	0.667442	2.1:+11256943	None:intergenic
TCCACCGGAGAAGAAAATTG+TGG	0.671462	2.1:-11256756	MS.gene055848:CDS
AAACACTCCAAAGAAACATG+CGG	0.686869	2.1:+11256506	None:intergenic
ATGAAGTTACAAGTAAACGA+AGG	0.690488	2.1:-11256919	MS.gene055848:CDS
CTGATGGGAATAGAGTCGGA+GGG	0.709185	2.1:-11256823	MS.gene055848:CDS
AAGTAAACGAAGGATCAGAG+AGG	0.722535	2.1:-11256909	MS.gene055848:CDS
GTTGTTGAGGACACAAACGA+CGG	0.770133	2.1:-11256557	MS.gene055848:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTCCATATTTTGCATTT+GGG	+	chr2.1:11256707-11256726	None:intergenic	20.0%
!!!	TAATTTCCATATTTTGCATT+TGG	+	chr2.1:11256708-11256727	None:intergenic	20.0%
!!	ATTGTTTCTTGTGTCAAATT+TGG	+	chr2.1:11256682-11256701	None:intergenic	25.0%
	AATGACCCAAATGCAAAATA+TGG	-	chr2.1:11256699-11256718	MS.gene055848:CDS	30.0%
	ATGAAGTTACAAGTAAACGA+AGG	-	chr2.1:11256875-11256894	MS.gene055848:CDS	30.0%
	ATGACAGAAATTTCTTCAGA+AGG	+	chr2.1:11256769-11256788	None:intergenic	30.0%
!	GATTTTTCTTCAACGATATG+TGG	+	chr2.1:11256601-11256620	None:intergenic	30.0%
!	TGTCAAATTTGGAACTTGTT+GGG	+	chr2.1:11256671-11256690	None:intergenic	30.0%
!!!	GGAATTTTGTTGGTTTTTGA+GGG	+	chr2.1:11256536-11256555	None:intergenic	30.0%
!!!	TCCAATGGTTTTTTCATGAT+GGG	+	chr2.1:11256739-11256758	None:intergenic	30.0%
!!!	TGGAATTTTGTTGGTTTTTG+AGG	+	chr2.1:11256537-11256556	None:intergenic	30.0%
	AAACACTCCAAAGAAACATG+CGG	+	chr2.1:11257291-11257310	None:intergenic	35.0%
	AATCGTTCTTACAATGCTGA+TGG	-	chr2.1:11256955-11256974	MS.gene055848:CDS	35.0%
	ATCGTTCTTACAATGCTGAT+GGG	-	chr2.1:11256956-11256975	MS.gene055848:CDS	35.0%
	ATTTCAGAAACATGCAGTGT+AGG	-	chr2.1:11256787-11256806	MS.gene055848:CDS	35.0%
	CATCATGAAAAAACCATTGG+AGG	-	chr2.1:11256738-11256757	MS.gene055848:CDS	35.0%
!	ACTTCATCTTCTCTTGTTTC+CGG	+	chr2.1:11256862-11256881	None:intergenic	35.0%
!	GTGTCAAATTTGGAACTTGT+TGG	+	chr2.1:11256672-11256691	None:intergenic	35.0%
!	TTTTCTTCAACGATATGTGG+TGG	+	chr2.1:11256598-11256617	None:intergenic	35.0%
!!	GTCAAATTTGGAACTTGTTG+GGG	+	chr2.1:11256670-11256689	None:intergenic	35.0%
!!	TGATGGTGATTTTGCTTCTT+GGG	+	chr2.1:11256560-11256579	None:intergenic	35.0%
!!!	CCAATGGTTTTTTCATGATG+GGG	+	chr2.1:11256738-11256757	None:intergenic	35.0%
!!!	CTCCAATGGTTTTTTCATGA+TGG	+	chr2.1:11256740-11256759	None:intergenic	35.0%
!!!	GGTATTTTGGTCATCTTTTG+TGG	+	chr2.1:11256515-11256534	None:intergenic	35.0%
!!!	GTTGGTTTTTGAGGGTATTT+TGG	+	chr2.1:11256528-11256547	None:intergenic	35.0%
	AAGCAGTAGTTGTCAAAGTG+AGG	-	chr2.1:11257170-11257189	MS.gene055848:CDS	40.0%
	AAGTAAACGAAGGATCAGAG+AGG	-	chr2.1:11256885-11256904	MS.gene055848:CDS	40.0%
	AATGCTGATGGGAATAGAGT+CGG	-	chr2.1:11256967-11256986	MS.gene055848:CDS	40.0%
	AGAACGATTCCTTGATGCAT+CGG	+	chr2.1:11256944-11256963	None:intergenic	40.0%
	AGTAAACGAAGGATCAGAGA+GGG	-	chr2.1:11256886-11256905	MS.gene055848:CDS	40.0%
	CATGAAAAAACCATTGGAGG+AGG	-	chr2.1:11256741-11256760	MS.gene055848:CDS	40.0%
	CCCCATCATGAAAAAACCAT+TGG	-	chr2.1:11256735-11256754	MS.gene055848:CDS	40.0%
	GTAGTTGTCAAAGTGAGGTT+AGG	-	chr2.1:11257175-11257194	MS.gene055848:CDS	40.0%
	TACGAATCCGCATGTTTCTT+TGG	-	chr2.1:11257281-11257300	MS.gene055848:CDS	40.0%
!	AACGATATGTGGTGGTGATT+TGG	+	chr2.1:11256590-11256609	None:intergenic	40.0%
!	ACTTGTTGGGGTTTGGAAAT+GGG	+	chr2.1:11256658-11256677	None:intergenic	40.0%
!	CTTCTTGGGTGGAATTTTGT+TGG	+	chr2.1:11256546-11256565	None:intergenic	40.0%
!	GGGAATTTTCCGATAGTCTT+CGG	-	chr2.1:11257085-11257104	MS.gene055848:CDS	40.0%
!!	AACTTGTTGGGGTTTGGAAA+TGG	+	chr2.1:11256659-11256678	None:intergenic	40.0%
!!	ATTTGGAACTTGTTGGGGTT+TGG	+	chr2.1:11256665-11256684	None:intergenic	40.0%
!!	GTGATGGTGATTTTGCTTCT+TGG	+	chr2.1:11256561-11256580	None:intergenic	40.0%
	ACCGGAGAAGAAAATTGTGG+CGG	-	chr2.1:11257041-11257060	MS.gene055848:CDS	45.0%
	AGGGAACTCAGAACAGGAAT+CGG	-	chr2.1:11256905-11256924	MS.gene055848:CDS	45.0%
	GTTGTTGAGGACACAAACGA+CGG	-	chr2.1:11257237-11257256	MS.gene055848:CDS	45.0%
	TCAAAGTGAGGTTAGGCAGA+CGG	-	chr2.1:11257182-11257201	MS.gene055848:CDS	45.0%
	TCCACCGGAGAAGAAAATTG+TGG	-	chr2.1:11257038-11257057	MS.gene055848:CDS	45.0%
	TTCTTCTCCGGTGGAATATC+CGG	+	chr2.1:11257033-11257052	None:intergenic	45.0%
	TTTGTGTCCTCAACAACCTC+CGG	+	chr2.1:11257234-11257253	None:intergenic	45.0%
!	ATCTTCTCTTGTTTCCGGCA+CGG	+	chr2.1:11256857-11256876	None:intergenic	45.0%
!	GGTGATTTGGATTGTGGTGA+TGG	+	chr2.1:11256577-11256596	None:intergenic	45.0%
!	TGGTGATTTTGCTTCTTGGG+TGG	+	chr2.1:11256557-11256576	None:intergenic	45.0%
!	TGTGGTGGTGATTTGGATTG+TGG	+	chr2.1:11256583-11256602	None:intergenic	45.0%
	CCGGAGAAGAAAATTGTGGC+GGG	-	chr2.1:11257042-11257061	MS.gene055848:CDS	50.0%
	CTGATGGGAATAGAGTCGGA+GGG	-	chr2.1:11256971-11256990	MS.gene055848:CDS	50.0%
	GAAGTCACTCCGATGCATCA+AGG	-	chr2.1:11256932-11256951	MS.gene055848:CDS	50.0%
	GATAGTCTTCGGCGTAACTC+CGG	-	chr2.1:11257096-11257115	MS.gene055848:CDS	50.0%
	GGAGTTACGCCGAAGACTAT+CGG	+	chr2.1:11257097-11257116	None:intergenic	50.0%
	TCAGAAGGTTCCTCCTCCAA+TGG	+	chr2.1:11256754-11256773	None:intergenic	50.0%
	TCAGAGAGGGAACTCAGAAC+AGG	-	chr2.1:11256899-11256918	MS.gene055848:CDS	50.0%
	TGAGGTTAGGCAGACGGAAA+GGG	-	chr2.1:11257188-11257207	MS.gene055848:CDS	50.0%
!	CCCGCCACAATTTTCTTCTC+CGG	+	chr2.1:11257045-11257064	None:intergenic	50.0%
!	GCCACAATTTTCTTCTCCGG+TGG	+	chr2.1:11257042-11257061	None:intergenic	50.0%
!!	AGAAAATTGTGGCGGGTCCA+CGG	-	chr2.1:11257049-11257068	MS.gene055848:CDS	50.0%
!!	GAGAGTACCGGATATTCCAC+CGG	-	chr2.1:11257023-11257042	MS.gene055848:CDS	50.0%
	AAACGACGGCGTTTCAGTGG+AGG	-	chr2.1:11257251-11257270	MS.gene055848:CDS	55.0%
	CAAGGTCACCGTCGTGTCAA+AGG	-	chr2.1:11257139-11257158	MS.gene055848:CDS	55.0%
	CACAAACGACGGCGTTTCAG+TGG	-	chr2.1:11257248-11257267	MS.gene055848:CDS	55.0%
	CCAACCGTCCTTTGACACGA+CGG	+	chr2.1:11257150-11257169	None:intergenic	55.0%
	GCTGATGGGAATAGAGTCGG+AGG	-	chr2.1:11256970-11256989	MS.gene055848:CDS	55.0%
	GGAATATCCGGTACTCTCGC+CGG	+	chr2.1:11257021-11257040	None:intergenic	55.0%
	GGTACTCTCGCCGGAGATTT+GGG	+	chr2.1:11257012-11257031	None:intergenic	55.0%
	GTCACCGTCGTGTCAAAGGA+CGG	-	chr2.1:11257143-11257162	MS.gene055848:CDS	55.0%
	GTGAGGTTAGGCAGACGGAA+AGG	-	chr2.1:11257187-11257206	MS.gene055848:CDS	55.0%
	GTTAGGCAGACGGAAAGGGA+CGG	-	chr2.1:11257192-11257211	MS.gene055848:CDS	55.0%
!	CAAATCTCCGGCGAGAGTAC+CGG	-	chr2.1:11257011-11257030	MS.gene055848:CDS	55.0%
!	TTCTCTTGTTTCCGGCACGG+TGG	+	chr2.1:11256854-11256873	None:intergenic	55.0%
	ACGACGGTGACCTTGACCTC+CGG	+	chr2.1:11257134-11257153	None:intergenic	60.0%
	CCGTCGTGTCAAAGGACGGT+TGG	-	chr2.1:11257147-11257166	MS.gene055848:CDS	60.0%
	CGGTACTCTCGCCGGAGATT+TGG	+	chr2.1:11257013-11257032	None:intergenic	60.0%
	GTGTCCTCAACAACCTCCGG+CGG	+	chr2.1:11257231-11257250	None:intergenic	60.0%
	TCCACGGTCTGTTCGTCGGA+GGG	-	chr2.1:11257065-11257084	MS.gene055848:CDS	60.0%
!	CGTAACTCCGGCGAAGGTGT+TGG	-	chr2.1:11257108-11257127	MS.gene055848:CDS	60.0%
!	TCTTGTTTCCGGCACGGTGG+CGG	+	chr2.1:11256851-11256870	None:intergenic	60.0%
!!	AAGGTGTTGGCCGGAGGTCA+AGG	-	chr2.1:11257121-11257140	MS.gene055848:CDS	60.0%
	CGGGTCCACGGTCTGTTCGT+CGG	-	chr2.1:11257061-11257080	MS.gene055848:CDS	65.0%
	CTTCGGCGTAACTCCGGCGA+AGG	-	chr2.1:11257102-11257121	MS.gene055848:CDS	65.0%
	GAGTCGGAGGGAGAGAGCGA+CGG	-	chr2.1:11256983-11257002	MS.gene055848:CDS	65.0%
	GTCCACGGTCTGTTCGTCGG+AGG	-	chr2.1:11257064-11257083	MS.gene055848:CDS	65.0%
	TCCCTCCGACGAACAGACCG+TGG	+	chr2.1:11257069-11257088	None:intergenic	65.0%
	TCCTCAACAACCTCCGGCGG+CGG	+	chr2.1:11257228-11257247	None:intergenic	65.0%
!!	ACTCCGGCGAAGGTGTTGGC+CGG	-	chr2.1:11257112-11257131	MS.gene055848:CDS	65.0%
	AGACGGAAAGGGACGGCCGG+CGG	-	chr2.1:11257199-11257218	MS.gene055848:CDS	70.0%
	CCTCCGGCCAACACCTTCGC+CGG	+	chr2.1:11257118-11257137	None:intergenic	70.0%
	GCGACGGCGGCCCAAATCTC+CGG	-	chr2.1:11256999-11257018	MS.gene055848:CDS	70.0%
	GGCAGACGGAAAGGGACGGC+CGG	-	chr2.1:11257196-11257215	MS.gene055848:CDS	70.0%
	TCCGCCGCCGGAGGTTGTTG+AGG	-	chr2.1:11257224-11257243	MS.gene055848:CDS	70.0%
	TCGGAGGGAGAGAGCGACGG+CGG	-	chr2.1:11256986-11257005	MS.gene055848:CDS	70.0%
!	TGTTTCCGGCACGGTGGCGG+TGG	+	chr2.1:11256848-11256867	None:intergenic	70.0%
	CACCACCACCGCCACCGTGC+CGG	-	chr2.1:11256840-11256859	MS.gene055848:CDS	75.0%
!	TTCCGGCACGGTGGCGGTGG+TGG	+	chr2.1:11256845-11256864	None:intergenic	75.0%
!!	CACGGTGGCGGTGGTGGTGG+TGG	+	chr2.1:11256839-11256858	None:intergenic	75.0%
!!	CCGGCGAAGGTGTTGGCCGG+AGG	-	chr2.1:11257115-11257134	MS.gene055848:CDS	75.0%
!!	GGTGGCGGTGGTGGTGGTGG+TGG	+	chr2.1:11256836-11256855	None:intergenic	75.0%
!	CCTCCGGCGGCGGAAACCGC+CGG	+	chr2.1:11257218-11257237	None:intergenic	80.0%
!!	CGGCACGGTGGCGGTGGTGG+TGG	+	chr2.1:11256842-11256861	None:intergenic	80.0%
!	CCGGCGGTTTCCGCCGCCGG+AGG	-	chr2.1:11257215-11257234	MS.gene055848:CDS	85.0%
!	CGGCCGGCGGTTTCCGCCGC+CGG	-	chr2.1:11257212-11257231	MS.gene055848:CDS	85.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	11256493	11257323	11256493	ID=MS.gene055848
chr2.1	mRNA	11256493	11257323	11256493	ID=MS.gene055848.t1;Parent=MS.gene055848
chr2.1	exon	11256493	11257323	11256493	ID=MS.gene055848.t1.exon1;Parent=MS.gene055848.t1
chr2.1	CDS	11256493	11257323	11256493	ID=cds.MS.gene055848.t1;Parent=MS.gene055848.t1

Gene Sequence

>MS.gene055848

ATGGGTTGTTGTATCAGCACCACAAAAGATGACCAAAATACCCTCAAAAACCAACAAAATTCCACCCAAGAAGCAAAATCACCATCACCACAATCCAAATCACCACCACATATCGTTGAAGAAAAATCTGTTGTGAAAGAAGTTCTATATGAAACAGAAACACCCATTTCCAAACCCCAACAAGTTCCAAATTTGACACAAGAAACAATGACCCAAATGCAAAATATGGAAATTACAAAAGACCCCATCATGAAAAAACCATTGGAGGAGGAACCTTCTGAAGAAATTTCTGTCATTTCAGAAACATGCAGTGTAGGTGAGAGCTACAGCTACAGCTACTCCACCACCACCACCACCGCCACCGTGCCGGAAACAAGAGAAGATGAAGTTACAAGTAAACGAAGGATCAGAGAGGGAACTCAGAACAGGAATCGGAATCGAAGTCACTCCGATGCATCAAGGAATCGTTCTTACAATGCTGATGGGAATAGAGTCGGAGGGAGAGAGCGACGGCGGCCCAAATCTCCGGCGAGAGTACCGGATATTCCACCGGAGAAGAAAATTGTGGCGGGTCCACGGTCTGTTCGTCGGAGGGAATTTTCCGATAGTCTTCGGCGTAACTCCGGCGAAGGTGTTGGCCGGAGGTCAAGGTCACCGTCGTGTCAAAGGACGGTTGGAAGCAGTAGTTGTCAAAGTGAGGTTAGGCAGACGGAAAGGGACGGCCGGCGGTTTCCGCCGCCGGAGGTTGTTGAGGACACAAACGACGGCGTTTCAGTGGAGGAGTCATTTACGAATCCGCATGTTTCTTTGGAGTGTTTTATTTTTCTGTAG

Protein sequence

>MS.gene055848.t1

MGCCISTTKDDQNTLKNQQNSTQEAKSPSPQSKSPPHIVEEKSVVKEVLYETETPISKPQQVPNLTQETMTQMQNMEITKDPIMKKPLEEEPSEEISVISETCSVGESYSYSYSTTTTTATVPETREDEVTSKRRIREGTQNRNRNRSHSDASRNRSYNADGNRVGGRERRRPKSPARVPDIPPEKKIVAGPRSVRRREFSDSLRRNSGEGVGRRSRSPSCQRTVGSSSCQSEVRQTERDGRRFPPPEVVEDTNDGVSVEESFTNPHVSLECFIFL