AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71419

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71419.t1 MTR_1g075680 98.408 754 12 0 1 754 1 754 0.0 1533
MS.gene71419.t1 MTR_4g092140 32.075 371 198 14 59 401 318 662 2.53e-34 140
MS.gene71419.t1 MTR_1g067630 29.673 428 226 18 18 400 4 401 2.13e-33 138
MS.gene71419.t1 MTR_7g109130 30.000 390 220 10 30 399 150 506 7.81e-33 136
MS.gene71419.t1 MTR_7g109130 30.000 390 220 10 30 399 71 427 8.58e-33 135
MS.gene71419.t1 MTR_7g109130 30.909 385 226 10 30 399 372 731 8.65e-33 136
MS.gene71419.t1 MTR_7g109130 30.000 390 220 10 30 399 372 728 1.55e-32 135
MS.gene71419.t1 MTR_7g105030 31.429 385 187 15 59 400 10 360 3.45e-32 134
MS.gene71419.t1 MTR_7g105030 31.429 385 187 15 59 400 10 360 3.45e-32 134
MS.gene71419.t1 MTR_2g069950 31.476 359 184 12 67 409 364 676 1.13e-31 133
MS.gene71419.t1 MTR_5g031470 27.470 506 284 19 65 533 421 880 1.95e-31 132
MS.gene71419.t1 MTR_1g059730 31.217 378 197 14 59 400 14 364 6.02e-31 130
MS.gene71419.t1 MTR_5g049620 27.843 510 277 21 65 533 396 855 2.82e-30 128
MS.gene71419.t1 MTR_1g083770 32.288 319 179 8 124 430 477 770 4.24e-30 128
MS.gene71419.t1 MTR_4g081390 29.942 344 207 12 83 412 463 786 5.99e-30 127
MS.gene71419.t1 MTR_5g049820 28.039 510 276 22 65 533 396 855 6.76e-30 127
MS.gene71419.t1 MTR_1g087880 28.788 396 225 12 26 399 364 724 1.06e-29 127
MS.gene71419.t1 MTR_7g112420 29.268 369 205 10 95 444 314 645 2.90e-29 125
MS.gene71419.t1 MTR_2g010760 32.110 327 179 12 99 409 481 780 2.70e-28 122
MS.gene71419.t1 MTR_2g096010 29.398 432 246 13 97 499 94 495 3.21e-28 122
MS.gene71419.t1 MTR_7g112420 29.396 364 205 10 95 444 444 769 6.15e-28 121
MS.gene71419.t1 MTR_7g091290 32.192 292 151 8 124 399 459 719 9.87e-27 117
MS.gene71419.t1 MTR_5g096570 30.464 302 171 8 119 406 496 772 5.19e-26 115
MS.gene71419.t1 MTR_7g061020 24.879 414 235 11 48 424 5 379 5.70e-26 114
MS.gene71419.t1 MTR_8g098230 31.024 332 185 10 119 431 545 851 6.62e-26 114
MS.gene71419.t1 MTR_7g113520 29.275 345 187 13 76 400 148 455 1.33e-25 113
MS.gene71419.t1 MTR_3g100270 29.070 344 171 11 91 396 40 348 1.76e-25 113
MS.gene71419.t1 MTR_5g025100 27.907 301 162 10 117 400 952 1214 1.90e-25 113
MS.gene71419.t1 MTR_2g082570 28.228 333 207 10 83 400 430 745 2.14e-25 112
MS.gene71419.t1 MTR_5g066320 29.003 331 189 10 91 396 48 357 7.03e-25 111
MS.gene71419.t1 MTR_3g060900 31.013 316 168 11 103 406 491 768 1.35e-24 110
MS.gene71419.t1 MTR_4g081390 30.796 289 169 10 83 357 465 736 1.87e-24 109
MS.gene71419.t1 MTR_1g082920 29.787 329 177 13 90 400 183 475 2.89e-24 109
MS.gene71419.t1 MTR_1g018940 28.947 380 182 13 91 418 39 382 2.94e-24 109
MS.gene71419.t1 MTR_1g081800 28.125 352 212 9 59 396 89 413 3.04e-24 108
MS.gene71419.t1 MTR_8g072430 27.703 296 177 9 117 404 938 1204 3.29e-24 109
MS.gene71419.t1 MTR_3g102170 27.824 363 208 10 91 418 39 382 3.58e-24 109
MS.gene71419.t1 MTR_4g112350 27.244 312 184 9 97 396 174 454 5.17e-24 108
MS.gene71419.t1 MTR_4g087040 28.035 453 233 17 27 430 154 562 6.33e-24 108
MS.gene71419.t1 MTR_8g098230 30.383 339 186 11 119 431 545 859 7.11e-24 108
MS.gene71419.t1 MTR_2g055910 27.864 323 184 10 88 396 109 396 3.47e-23 105
MS.gene71419.t1 MTR_6g086735 28.704 324 163 9 98 399 164 441 6.11e-23 104
MS.gene71419.t1 MTR_6g086735 28.704 324 163 9 98 399 164 441 6.23e-23 104
MS.gene71419.t1 MTR_2g101990 27.988 343 188 10 78 399 207 511 1.46e-22 103
MS.gene71419.t1 MTR_8g080910 26.683 416 228 15 20 396 15 392 1.72e-22 103
MS.gene71419.t1 MTR_2g087840 29.293 396 202 16 56 414 86 440 2.63e-22 103
MS.gene71419.t1 MTR_5g011500 29.221 308 175 10 106 393 113 397 4.48e-22 102
MS.gene71419.t1 MTR_4g094882 26.761 355 193 11 91 400 43 375 5.72e-22 102
MS.gene71419.t1 MTR_1g017540 27.812 320 164 10 105 397 55 334 4.63e-21 99.0
MS.gene71419.t1 MTR_4g071210 26.949 449 243 16 39 462 72 460 3.12e-20 96.7
MS.gene71419.t1 MTR_4g071210 26.949 449 243 16 39 462 72 460 3.37e-20 96.7
MS.gene71419.t1 MTR_8g104200 28.093 388 229 12 59 428 516 871 1.04e-19 95.1
MS.gene71419.t1 MTR_7g075060 27.469 324 161 11 105 393 107 391 2.01e-19 94.0
MS.gene71419.t1 MTR_2g436650 27.027 370 192 11 98 430 167 495 2.14e-19 93.6
MS.gene71419.t1 MTR_2g436650 27.273 385 197 12 98 440 247 590 2.62e-19 93.6
MS.gene71419.t1 MTR_3g117330 28.732 355 177 13 130 462 170 470 3.72e-19 93.2
MS.gene71419.t1 MTR_4g123730 28.875 329 170 11 99 396 191 486 3.36e-18 90.5
MS.gene71419.t1 MTR_7g093720 27.869 305 156 10 115 396 129 392 5.05e-18 89.7
MS.gene71419.t1 MTR_4g124650 28.929 280 152 9 130 397 218 462 7.30e-18 89.0
MS.gene71419.t1 MTR_4g119980 27.523 327 167 10 98 396 255 539 1.35e-17 87.8
MS.gene71419.t1 MTR_7g091290 27.562 283 135 6 124 399 456 675 5.39e-17 86.3
MS.gene71419.t1 MTR_6g084490 28.274 336 191 9 120 436 541 845 2.92e-16 83.6
MS.gene71419.t1 MTR_1g484960 28.028 289 141 13 134 393 73 323 2.55e-14 77.8
MS.gene71419.t1 MTR_8g076190 24.926 337 185 10 117 428 89 382 4.20e-13 73.6
MS.gene71419.t1 MTR_2g082570 26.829 246 151 7 83 314 430 660 4.33e-13 73.2
MS.gene71419.t1 MTR_5g094310 22.917 480 295 18 52 494 70 511 8.67e-12 69.3
MS.gene71419.t1 MTR_3g113630 26.059 307 165 13 89 374 136 401 3.23e-11 67.4
MS.gene71419.t1 MTR_3g113630 26.059 307 165 13 89 374 136 401 3.51e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71419.t1 AT4G14330 58.846 780 238 17 1 751 1 726 0.0 800
MS.gene71419.t1 AT4G21270 33.333 345 176 13 99 420 478 791 8.32e-35 142
MS.gene71419.t1 AT4G05190 32.394 355 203 13 59 393 429 766 6.14e-33 136
MS.gene71419.t1 AT4G05190 32.394 355 203 13 59 393 416 753 1.15e-32 135
MS.gene71419.t1 AT2G37420 28.000 500 281 20 18 477 3 463 4.78e-32 134
MS.gene71419.t1 AT2G37420 28.000 500 281 20 18 477 3 463 4.78e-32 134
MS.gene71419.t1 AT2G36200 31.169 385 188 15 59 400 13 363 4.28e-31 131
MS.gene71419.t1 AT2G36200 31.169 385 188 15 59 400 13 363 5.13e-31 131
MS.gene71419.t1 AT2G22610 27.083 528 289 17 63 539 437 919 1.31e-30 130
MS.gene71419.t1 AT1G09170 29.095 409 221 14 18 399 397 763 1.52e-30 129
MS.gene71419.t1 AT1G09170 29.095 409 221 14 18 399 397 763 1.52e-30 129
MS.gene71419.t1 AT1G09170 28.935 432 236 15 18 422 397 784 1.58e-30 129
MS.gene71419.t1 AT1G09170 28.935 432 236 15 18 422 397 784 1.59e-30 129
MS.gene71419.t1 AT1G09170 29.095 409 221 14 18 399 397 763 3.98e-30 128
MS.gene71419.t1 AT2G28620 29.108 426 238 15 59 448 51 448 7.18e-30 127
MS.gene71419.t1 AT2G28620 29.108 426 238 15 59 448 51 448 7.50e-30 127
MS.gene71419.t1 AT2G28620 29.108 426 238 15 59 448 51 448 7.50e-30 127
MS.gene71419.t1 AT2G22610 26.782 519 300 16 63 556 438 901 1.49e-29 126
MS.gene71419.t1 AT2G22610 26.782 519 300 16 63 556 437 900 1.70e-29 126
MS.gene71419.t1 AT3G45850 29.679 374 203 12 59 400 56 401 2.73e-29 125
MS.gene71419.t1 AT3G45850 29.679 374 203 12 59 400 56 401 2.73e-29 125
MS.gene71419.t1 AT4G27180 31.692 325 178 12 99 404 434 733 5.00e-29 124
MS.gene71419.t1 AT4G27180 31.692 325 178 12 99 404 434 733 5.00e-29 124
MS.gene71419.t1 AT2G47500 27.803 446 259 13 26 445 367 775 5.93e-29 124
MS.gene71419.t1 AT2G47500 27.803 446 259 13 26 445 367 775 7.71e-29 124
MS.gene71419.t1 AT5G27000 30.854 363 196 15 59 399 395 724 1.33e-28 123
MS.gene71419.t1 AT1G73860 29.917 361 194 12 95 430 551 877 3.65e-28 122
MS.gene71419.t1 AT1G73860 29.917 361 194 13 95 430 468 794 7.95e-28 120
MS.gene71419.t1 AT1G18410 29.846 325 173 11 95 399 531 820 9.14e-28 120
MS.gene71419.t1 AT1G18410 29.846 325 173 11 95 399 531 820 9.14e-28 120
MS.gene71419.t1 AT1G18410 29.846 325 173 11 95 399 674 963 1.15e-27 120
MS.gene71419.t1 AT1G72250 28.421 475 268 16 79 538 516 933 1.62e-27 120
MS.gene71419.t1 AT1G72250 28.421 475 268 16 79 538 525 942 1.64e-27 120
MS.gene71419.t1 AT3G44730 31.419 296 164 7 124 406 491 760 1.75e-27 120
MS.gene71419.t1 AT3G44730 31.419 296 164 7 124 406 491 760 1.75e-27 120
MS.gene71419.t1 AT1G72250 28.421 475 268 16 79 538 537 954 1.78e-27 120
MS.gene71419.t1 AT3G44730 31.419 296 164 7 124 406 446 715 1.82e-27 120
MS.gene71419.t1 AT3G44730 31.419 296 164 7 124 406 446 715 1.82e-27 120
MS.gene71419.t1 AT1G72250 28.421 475 268 16 79 538 536 953 1.91e-27 120
MS.gene71419.t1 AT3G10310 32.450 302 153 9 124 406 430 699 4.19e-27 118
MS.gene71419.t1 AT3G10310 32.450 302 153 9 124 406 430 699 5.36e-27 118
MS.gene71419.t1 AT5G60930 28.783 337 190 9 94 396 40 360 8.97e-27 117
MS.gene71419.t1 AT1G18410 29.577 355 191 12 95 431 521 834 9.02e-27 117
MS.gene71419.t1 AT5G60930 28.783 337 190 9 94 396 40 360 1.13e-26 117
MS.gene71419.t1 AT5G60930 28.783 337 190 9 94 396 40 360 1.38e-26 117
MS.gene71419.t1 AT5G54670 31.546 317 181 13 99 400 383 678 1.61e-26 116
MS.gene71419.t1 AT5G54670 31.546 317 181 13 99 400 443 738 1.66e-26 116
MS.gene71419.t1 AT5G54670 31.546 317 181 13 99 400 443 738 1.66e-26 116
MS.gene71419.t1 AT1G18410 30.650 323 165 12 95 399 674 955 2.55e-26 116
MS.gene71419.t1 AT3G54870 28.140 430 225 15 115 506 165 548 7.36e-26 114
MS.gene71419.t1 AT3G54870 28.140 430 225 15 115 506 165 548 7.41e-26 114
MS.gene71419.t1 AT3G54870 27.907 430 226 15 115 506 165 548 9.83e-26 114
MS.gene71419.t1 AT1G09170 29.459 370 193 13 18 360 397 725 1.75e-25 113
MS.gene71419.t1 AT1G09170 29.459 370 193 13 18 360 397 725 1.75e-25 113
MS.gene71419.t1 AT1G63640 28.224 411 230 14 26 406 435 810 3.10e-25 112
MS.gene71419.t1 AT5G27550 27.520 367 201 11 90 440 168 485 3.25e-25 112
MS.gene71419.t1 AT5G27550 27.520 367 201 11 90 440 168 485 3.25e-25 112
MS.gene71419.t1 AT1G63640 28.224 411 230 14 26 406 435 810 3.47e-25 112
MS.gene71419.t1 AT1G63640 28.224 411 230 14 26 406 435 810 3.47e-25 112
MS.gene71419.t1 AT1G63640 28.224 411 230 14 26 406 425 800 3.50e-25 112
MS.gene71419.t1 AT3G16060 29.851 335 175 10 98 415 218 509 4.90e-25 111
MS.gene71419.t1 AT5G65930 27.653 311 174 11 113 406 944 1220 7.97e-25 111
MS.gene71419.t1 AT5G65930 27.653 311 174 11 113 406 945 1221 7.98e-25 111
MS.gene71419.t1 AT5G65930 27.653 311 174 11 113 406 951 1227 9.03e-25 111
MS.gene71419.t1 AT1G55550 26.303 403 249 12 81 465 111 483 2.31e-24 109
MS.gene71419.t1 AT5G47820 27.692 390 209 13 91 436 42 402 3.37e-24 109
MS.gene71419.t1 AT5G47820 27.692 390 209 13 91 436 42 402 3.37e-24 109
MS.gene71419.t1 AT1G63640 28.125 416 217 14 26 406 435 803 4.06e-24 109
MS.gene71419.t1 AT5G02370 27.483 302 180 7 99 396 74 340 4.38e-24 107
MS.gene71419.t1 AT1G18550 27.974 311 182 9 97 396 202 481 4.64e-24 108
MS.gene71419.t1 AT5G41310 27.970 404 220 12 59 438 423 779 9.04e-24 108
MS.gene71419.t1 AT1G12430 29.530 298 172 8 115 393 131 409 2.68e-23 106
MS.gene71419.t1 AT1G12430 29.530 298 172 8 115 393 131 409 2.82e-23 106
MS.gene71419.t1 AT5G27950 27.108 332 199 10 86 396 95 404 3.67e-23 105
MS.gene71419.t1 AT3G50240 26.802 444 239 15 91 493 56 454 1.77e-22 103
MS.gene71419.t1 AT3G50240 26.802 444 239 15 91 493 56 454 1.85e-22 103
MS.gene71419.t1 AT3G50240 26.802 444 239 15 91 493 56 454 1.91e-22 103
MS.gene71419.t1 AT3G49650 28.873 284 152 7 130 396 95 345 1.20e-21 100
MS.gene71419.t1 AT3G44050 29.262 393 206 16 56 414 91 445 1.35e-21 101
MS.gene71419.t1 AT3G17360 26.799 403 209 16 34 396 149 505 1.49e-21 101
MS.gene71419.t1 AT3G17360 26.799 403 209 16 34 396 149 505 1.61e-21 101
MS.gene71419.t1 AT3G17360 26.799 403 209 16 34 396 149 505 1.78e-21 101
MS.gene71419.t1 AT3G63480 28.448 348 174 13 97 412 52 356 3.11e-21 98.2
MS.gene71419.t1 AT3G63480 28.775 351 173 12 97 412 52 360 1.02e-20 96.7
MS.gene71419.t1 AT3G19050 28.398 412 208 17 46 414 178 545 1.27e-20 98.6
MS.gene71419.t1 AT1G01950 26.119 402 213 15 36 393 38 399 1.58e-20 97.4
MS.gene71419.t1 AT1G01950 26.119 402 213 15 36 393 38 399 1.72e-20 97.4
MS.gene71419.t1 AT1G01950 26.119 402 213 15 36 393 38 399 2.12e-20 97.1
MS.gene71419.t1 AT1G59540 26.558 369 210 12 116 462 60 389 3.36e-20 96.3
MS.gene71419.t1 AT3G16630 28.045 353 179 12 78 396 215 526 7.65e-20 95.1
MS.gene71419.t1 AT3G16630 28.045 353 179 12 78 396 215 526 7.65e-20 95.1
MS.gene71419.t1 AT2G21380 29.373 303 158 10 110 396 159 421 2.11e-19 94.0
MS.gene71419.t1 AT2G21380 29.373 303 158 10 110 396 159 421 2.11e-19 94.0
MS.gene71419.t1 AT5G06670 28.620 297 146 10 124 396 131 385 4.29e-19 93.2
MS.gene71419.t1 AT5G06670 28.620 297 146 10 124 396 131 385 4.29e-19 93.2
MS.gene71419.t1 AT5G06670 28.620 297 146 10 124 396 131 385 4.96e-19 92.4
MS.gene71419.t1 AT5G06670 28.620 297 146 10 124 396 131 385 5.01e-19 92.4
MS.gene71419.t1 AT5G06670 28.620 297 146 10 124 396 131 385 5.01e-19 92.4
MS.gene71419.t1 AT5G06670 28.620 297 146 10 124 396 131 385 5.01e-19 92.4
MS.gene71419.t1 AT3G12020 30.333 300 137 12 124 396 134 388 8.47e-19 92.0
MS.gene71419.t1 AT3G12020 30.333 300 137 12 124 396 134 388 8.47e-19 92.0
MS.gene71419.t1 AT1G01950 28.522 291 142 10 136 393 1 258 1.20e-18 91.3
MS.gene71419.t1 AT4G39050 28.904 301 156 11 113 396 156 415 1.69e-18 91.3
MS.gene71419.t1 AT3G12020 30.333 300 137 12 124 396 134 388 1.93e-18 90.9
MS.gene71419.t1 AT3G12020 30.333 300 137 12 124 396 134 388 1.93e-18 90.9
MS.gene71419.t1 AT1G09170 36.806 144 81 3 264 399 586 727 3.69e-18 90.1
MS.gene71419.t1 AT5G06670 29.371 286 138 11 134 396 150 394 2.15e-17 87.4
MS.gene71419.t1 AT5G06670 29.371 286 138 11 134 396 150 394 2.15e-17 87.4
MS.gene71419.t1 AT4G14150 26.748 329 182 11 99 396 126 426 2.60e-17 87.4
MS.gene71419.t1 AT1G21730 28.477 302 158 11 115 396 131 394 4.31e-17 86.7
MS.gene71419.t1 AT3G50240 26.904 394 202 15 141 493 4 352 8.45e-16 82.4
MS.gene71419.t1 AT5G27950 28.137 263 149 9 149 396 1 238 1.37e-15 80.5
MS.gene71419.t1 AT2G21300 28.269 283 146 10 130 394 101 344 3.88e-15 80.1
MS.gene71419.t1 AT2G21300 28.269 283 146 10 130 394 101 344 3.88e-15 80.1
MS.gene71419.t1 AT2G21300 28.269 283 146 10 130 394 101 344 3.88e-15 80.1
MS.gene71419.t1 AT2G21300 28.269 283 146 10 130 394 101 344 3.88e-15 80.1
MS.gene71419.t1 AT2G21300 28.269 283 146 10 130 394 101 344 3.88e-15 80.1
MS.gene71419.t1 AT5G65460 25.316 316 180 11 97 397 179 453 7.52e-15 79.3
MS.gene71419.t1 AT5G65460 25.316 316 180 11 97 397 179 453 8.36e-15 79.3
MS.gene71419.t1 AT5G65460 25.316 316 180 11 97 397 179 453 8.72e-15 79.3
MS.gene71419.t1 AT1G59540 25.893 336 188 12 149 462 1 297 1.01e-14 78.6
MS.gene71419.t1 AT5G65460 25.316 316 180 11 97 397 179 453 1.09e-14 79.0
MS.gene71419.t1 AT5G10470 26.899 316 175 11 97 397 183 457 3.31e-14 77.4
MS.gene71419.t1 AT5G10470 26.899 316 175 11 97 397 183 457 3.52e-14 77.4
MS.gene71419.t1 AT4G24170 25.704 284 153 10 130 394 80 324 2.90e-13 74.3
MS.gene71419.t1 AT4G24170 25.704 284 153 10 130 394 80 324 2.90e-13 74.3
MS.gene71419.t1 AT5G65460 24.768 323 180 12 97 397 179 460 6.75e-13 73.2

Find 186 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATCTTTGTTGTTGAAAT+TGG 0.116300 1.3:-54232612 None:intergenic
AAGGATTAATGGTGTGAAAT+TGG 0.190481 1.3:+54232841 MS.gene71419:CDS
GTTCTAACTCTAGATCTATT+AGG 0.195325 1.3:+54232720 MS.gene71419:CDS
ATTAGGGTTAAGGCTGATTT+TGG 0.209720 1.3:+54232737 MS.gene71419:CDS
ACAAGAGTTGGAAAAGAAAT+TGG 0.209936 1.3:+54234958 MS.gene71419:CDS
GGGTTCGTTCGTTTACCTTT+AGG 0.248852 1.3:-54234925 None:intergenic
GGAGGTGGTGGTGGAGGTGG+AGG 0.251870 1.3:+54233112 MS.gene71419:CDS
GGTGGTGGAGGTGGAGGGTT+TGG 0.257552 1.3:+54233118 MS.gene71419:CDS
TCGCTTTGGCTCCATATTCT+AGG 0.260142 1.3:-54234667 None:intergenic
GGAGGTGGAGGGTTTGGATT+TGG 0.275827 1.3:+54233124 MS.gene71419:CDS
ACAATCTCTACCCTAGAATA+TGG 0.305778 1.3:+54234656 MS.gene71419:CDS
AACTTGGAAGCATACGTTAT+TGG 0.309181 1.3:+54235745 MS.gene71419:CDS
ACTTGAAGTGATGGGGAAAA+AGG 0.310814 1.3:+54233939 MS.gene71419:CDS
AAGAATGCAACCTATATATC+TGG 0.311451 1.3:+54233964 MS.gene71419:CDS
GTGAATTCTCAGCATCCTAT+TGG 0.311812 1.3:-54235566 None:intergenic
CTTGCTTGTAAAACAGATAA+AGG 0.314448 1.3:-54232698 None:intergenic
AGGATTAATGGTGTGAAATT+GGG 0.314756 1.3:+54232842 MS.gene71419:CDS
TGCTTCCAAGTTCTCCTTGT+TGG 0.317551 1.3:-54235734 None:intergenic
AGGGATTGGTGTTCCATATT+GGG 0.326230 1.3:-54235626 None:intergenic
ATTGTCTTGTGGATCTCTTT+AGG 0.326561 1.3:-54234638 None:intergenic
GTAAGTTTGCTGTCTCTAAA+AGG 0.328198 1.3:-54234438 None:intergenic
CAAAGGGAGCTCTCCCAATA+TGG 0.331740 1.3:+54235613 MS.gene71419:CDS
TTAATCTCCTCCTCACTTGC+AGG 0.333781 1.3:-54234902 None:intergenic
GAATCTTTGTTGTTGAAATT+GGG 0.334497 1.3:-54232611 None:intergenic
ATTCTCGCAATAACTTCAAT+TGG 0.339440 1.3:-54232647 None:intergenic
TTCTAACTCTAGATCTATTA+GGG 0.347769 1.3:+54232721 MS.gene71419:CDS
TTTGGTGATGGGTGTGGATG+TGG 0.353870 1.3:-54232587 None:intergenic
TTTGTGGAATCAAGGATTAA+TGG 0.354980 1.3:+54232830 MS.gene71419:CDS
ATTGAACAAGCTGGTCAAAC+TGG 0.355976 1.3:+54234235 MS.gene71419:CDS
TGCTTCATTTCCAGATATAT+AGG 0.362177 1.3:-54233974 None:intergenic
GCAGGCGGGGATTGTGTATA+GGG 0.362748 1.3:+54232937 MS.gene71419:CDS
GAAGAGTCTTCCTCCTTAAC+CGG 0.362939 1.3:-54234716 None:intergenic
TAGGGATTGGTGTTCCATAT+TGG 0.364220 1.3:-54235627 None:intergenic
CCGAAGATAGAGGATTATTC+TGG 0.365897 1.3:+54235520 MS.gene71419:CDS
GGTAAGAGTCATACGATGTT+TGG 0.372659 1.3:+54232905 MS.gene71419:CDS
ATAACTTCAATTGGGTGTTC+AGG 0.383722 1.3:-54232638 None:intergenic
TACAAAAGCACGGATGATCT+TGG 0.385204 1.3:+54235196 MS.gene71419:CDS
AGGGCTTTGAGGGATATTCT+TGG 0.387276 1.3:+54232956 MS.gene71419:CDS
TTGTGGATCTCTTTAGGATC+AGG 0.388675 1.3:-54234632 None:intergenic
ACAAGAAATTTGTGGAATCA+AGG 0.392206 1.3:+54232822 MS.gene71419:CDS
AATGGTGAAATCGATGGATT+TGG 0.394062 1.3:+54235219 MS.gene71419:CDS
AGTGGAGAAAGAGGTGATAG+AGG 0.394089 1.3:+54235465 MS.gene71419:CDS
TTTCCAACTCTTGTCTCAGA+TGG 0.394395 1.3:-54234949 None:intergenic
GGGTGTGGATGTGGTGGTGT+AGG 0.397359 1.3:-54232578 None:intergenic
TCCACCACCACCTCCATTAG+TGG 0.398128 1.3:-54233104 None:intergenic
CTCTAGATCTATTAGGGTTA+AGG 0.400943 1.3:+54232727 MS.gene71419:CDS
TCCACTAATGGAGGTGGTGG+TGG 0.407208 1.3:+54233103 MS.gene71419:CDS
GTATTTGGACAGGGTTGGTT+TGG 0.407900 1.3:-54235304 None:intergenic
TGAAAACGAGTCAAAAGAAA+TGG 0.408896 1.3:+54235138 MS.gene71419:CDS
AGTGGAAGAAGATGAGGAAG+TGG 0.412522 1.3:+54235447 MS.gene71419:CDS
ACTAATGGAGGTGGTGGTGG+AGG 0.414276 1.3:+54233106 MS.gene71419:CDS
TTGTTGTTGAAATTGGGATT+TGG 0.414314 1.3:-54232605 None:intergenic
TGTTTCTGAGGAAGAGGAAC+TGG 0.414383 1.3:+54232790 MS.gene71419:CDS
TTGGGATTTGGTGATGGGTG+TGG 0.417125 1.3:-54232593 None:intergenic
TTGAAATTGGGATTTGGTGA+TGG 0.418140 1.3:-54232599 None:intergenic
CCAACTCTTGTCTCAGATGG+AGG 0.418149 1.3:-54234946 None:intergenic
ATGTATGGACCGACTGGTTC+TGG 0.420486 1.3:+54232884 MS.gene71419:CDS
ACGAACTATACATTTCGCTT+TGG 0.425631 1.3:-54234681 None:intergenic
AATGGAGGTGGTGGTGGAGG+TGG 0.425905 1.3:+54233109 MS.gene71419:CDS
AAATGTACTATTATGATGTA+TGG 0.428051 1.3:+54232869 MS.gene71419:CDS
TGCTGTGCTAAGAGCTAAAG+TGG 0.429631 1.3:+54234871 MS.gene71419:CDS
GAGTTATCAAATGCGTTGAA+TGG 0.429834 1.3:-54232511 None:intergenic
AGCAGGCGGGGATTGTGTAT+AGG 0.429994 1.3:+54232936 MS.gene71419:CDS
TGGTCCTCATACCCCGGTTA+AGG 0.430902 1.3:+54234703 MS.gene71419:CDS
AGATGAGGAAGTGGAGAAAG+AGG 0.433971 1.3:+54235456 MS.gene71419:CDS
CGCTTTGGCTCCATATTCTA+GGG 0.438148 1.3:-54234666 None:intergenic
AGTGATGGTGATTCTTCTAA+AGG 0.440675 1.3:+54233004 MS.gene71419:CDS
AGAGGTGATAGAGGAAAAGA+GGG 0.443722 1.3:+54235474 MS.gene71419:CDS
AAGAGGTGATAGAGGAAAAG+AGG 0.445864 1.3:+54235473 MS.gene71419:CDS
GGAGCTGACAAGGAAAATAA+TGG 0.446418 1.3:+54235541 MS.gene71419:CDS
AGTGTCCAACAAGGAGAACT+TGG 0.452092 1.3:+54235729 MS.gene71419:CDS
GTGGAGGGTTTGGATTTGGT+TGG 0.454092 1.3:+54233128 MS.gene71419:CDS
CATATTGGGAGAGCTCCCTT+TGG 0.459595 1.3:-54235612 None:intergenic
GTGATGGTGATTCTTCTAAA+GGG 0.459995 1.3:+54233005 MS.gene71419:CDS
CTCAAAAGAAATTCAGAAAG+TGG 0.460854 1.3:+54234005 MS.gene71419:CDS
CCAGAATAATCCTCTATCTT+CGG 0.462382 1.3:-54235520 None:intergenic
AAGCATCGTCTCAATTTCAA+TGG 0.463001 1.3:+54232542 MS.gene71419:CDS
AGGAAAATAATGGTTCCAAT+AGG 0.463360 1.3:+54235551 MS.gene71419:CDS
TTGAGGGATATTCTTGGAGA+TGG 0.464538 1.3:+54232962 MS.gene71419:CDS
TTCTTCTCACTTGATTTCAC+AGG 0.465509 1.3:-54235691 None:intergenic
CTCCAGCTCAACAAACTCAT+TGG 0.466125 1.3:-54234999 None:intergenic
GATTGTGTATAGGGCTTTGA+GGG 0.466134 1.3:+54232946 MS.gene71419:CDS
TGAAATTGGGATTTGGTGAT+GGG 0.466283 1.3:-54232598 None:intergenic
TAACAAAAGTCCGAAGATAG+AGG 0.467142 1.3:+54235510 MS.gene71419:CDS
TGAGGGATATTCTTGGAGAT+GGG 0.467584 1.3:+54232963 MS.gene71419:CDS
CAACTCTTGTCTCAGATGGA+GGG 0.467976 1.3:-54234945 None:intergenic
GTTTATCATGAAGTTACAAA+TGG 0.468535 1.3:+54234781 MS.gene71419:CDS
CAAAAGAAATGGAGCCGAAT+GGG 0.472089 1.3:+54235149 MS.gene71419:CDS
TATATATCTGGAAATGAAGC+AGG 0.472214 1.3:+54233976 MS.gene71419:CDS
GGATTAATGGTGTGAAATTG+GGG 0.476005 1.3:+54232843 MS.gene71419:CDS
GACCAATGAGTTTGTTGAGC+TGG 0.477397 1.3:+54234997 MS.gene71419:CDS
TGAGCTGGAGAGGAAGAGAA+TGG 0.480271 1.3:+54235012 MS.gene71419:CDS
GGATGTGGTGGTGTAGGTGC+TGG 0.486779 1.3:-54232572 None:intergenic
TCCTCCTTAACCGGGGTATG+AGG 0.489867 1.3:-54234707 None:intergenic
TATGTTTGTGCACCAAACTT+TGG 0.490049 1.3:+54235355 MS.gene71419:CDS
TGCGAGAATTCGTGACTACC+CGG 0.490085 1.3:+54232661 MS.gene71419:CDS
TACTCTCTGTGGAAACCAAA+GGG 0.492142 1.3:+54235597 MS.gene71419:CDS
CTTGCACGCGAAGTTATTGT+CGG 0.492611 1.3:+54235265 MS.gene71419:CDS
AGAAAGGATATTGCAGCAGC+AGG 0.494111 1.3:+54235036 MS.gene71419:CDS
TGAAATTCTGAGGAAGAGAC+TGG 0.495469 1.3:+54235066 MS.gene71419:CDS
AGCTGGTCAAACTGGATTTG+AGG 0.498372 1.3:+54234243 MS.gene71419:CDS
CTTGGAAGAGGAAGAAGGTG+TGG 0.498494 1.3:-54232483 None:intergenic
AAAGCACTCTTTGTAATGAC+AGG 0.500609 1.3:+54234046 MS.gene71419:CDS
AGAGGAAGAGAATGGAAGAA+AGG 0.502616 1.3:+54235020 MS.gene71419:CDS
TGTGAAATCAAGTGAGAAGA+AGG 0.502711 1.3:+54235693 MS.gene71419:CDS
TTAGCCGTCCTCCCACTGTT+GGG 0.505464 1.3:-54234183 None:intergenic
GAAGTTATTGTCGGCATGCA+AGG 0.507292 1.3:+54235274 MS.gene71419:CDS
AGGAGAAGAAGAAGCAGAGC+AGG 0.509255 1.3:+54235414 MS.gene71419:CDS
GGATTGTGTATAGGGCTTTG+AGG 0.509476 1.3:+54232945 MS.gene71419:CDS
CTTGTTCTACAAGAAATTTG+TGG 0.509556 1.3:+54232814 MS.gene71419:CDS
TTTGGATGTTCGAAGCAGGC+GGG 0.512838 1.3:+54232923 MS.gene71419:CDS
GGTGATGGGTGTGGATGTGG+TGG 0.513114 1.3:-54232584 None:intergenic
TTCTCGCAATAACTTCAATT+GGG 0.514101 1.3:-54232646 None:intergenic
TAGGTCAAACTTGAAGTGAT+GGG 0.516158 1.3:+54233931 MS.gene71419:intron
ATTAGCCGTCCTCCCACTGT+TGG 0.517267 1.3:-54234184 None:intergenic
GAGGTGGTGGTGGAGGTGGA+GGG 0.518438 1.3:+54233113 MS.gene71419:CDS
TTCTTCAAAGCATGAGCGTA+AGG 0.520449 1.3:+54235114 MS.gene71419:CDS
TCAAAGTATTTGGACAGGGT+TGG 0.520555 1.3:-54235309 None:intergenic
CGACAATAACTTCGCGTGCA+AGG 0.521670 1.3:-54235264 None:intergenic
TGAATGGATTTGCTTGGAAG+AGG 0.523605 1.3:-54232495 None:intergenic
GATGTTTGGATGTTCGAAGC+AGG 0.524123 1.3:+54232919 MS.gene71419:CDS
ATGCGTTGAATGGATTTGCT+TGG 0.524842 1.3:-54232501 None:intergenic
ACGGCTAATGCTTGTGGACA+TGG 0.527289 1.3:+54234198 MS.gene71419:CDS
TCAGAAAATATTGAACAAGC+TGG 0.529266 1.3:+54234226 MS.gene71419:CDS
GGTGTCTGTTTCTGAGGAAG+AGG 0.533081 1.3:+54232784 MS.gene71419:CDS
ATTTGCTTGGAAGAGGAAGA+AGG 0.534731 1.3:-54232488 None:intergenic
TGATGGGGTGTCTGTTTCTG+AGG 0.536317 1.3:+54232778 MS.gene71419:CDS
TTCAATTGGGTGTTCAGGAG+GGG 0.536985 1.3:-54232633 None:intergenic
TTGTCCACTAATGGAGGTGG+TGG 0.539176 1.3:+54233100 MS.gene71419:CDS
TGAGGAGGAGATTAACCTAA+AGG 0.539837 1.3:+54234910 MS.gene71419:CDS
CTAATGCTTGTGGACATGGC+AGG 0.542042 1.3:+54234202 MS.gene71419:CDS
CTTCAATTGGGTGTTCAGGA+GGG 0.542953 1.3:-54232634 None:intergenic
TTCAGAAAGTGGAGAAGCGA+AGG 0.543184 1.3:+54234016 MS.gene71419:CDS
ATGAGTTTGTTGAGCTGGAG+AGG 0.543613 1.3:+54235002 MS.gene71419:CDS
AAGAGTCTTCCTCCTTAACC+GGG 0.545497 1.3:-54234715 None:intergenic
TGATAAAGTGGAAGAAGATG+AGG 0.546943 1.3:+54235441 MS.gene71419:CDS
GTAGGTCAAACTTGAAGTGA+TGG 0.547426 1.3:+54233930 MS.gene71419:intron
GTCTAAGAACAATTCTTCAA+AGG 0.552508 1.3:+54233150 MS.gene71419:CDS
CAAACTTACCATGCTTCTGC+AGG 0.553017 1.3:+54234452 MS.gene71419:CDS
CCTCCATCTGAGACAAGAGT+TGG 0.554353 1.3:+54234946 MS.gene71419:CDS
ACTTCAATTGGGTGTTCAGG+AGG 0.559031 1.3:-54232635 None:intergenic
GAGGGATATTCTTGGAGATG+GGG 0.559140 1.3:+54232964 MS.gene71419:CDS
AGGATCAAGAATTGCTGCAA+TGG 0.559733 1.3:+54234754 MS.gene71419:CDS
AAAGCGAAATGTATAGTTCG+TGG 0.559976 1.3:+54234683 MS.gene71419:CDS
AATTCTTGATCCTAAAATGA+CGG 0.569423 1.3:-54234744 None:intergenic
TTACTCTCTGTGGAAACCAA+AGG 0.570732 1.3:+54235596 MS.gene71419:CDS
GGATTATTCTGGAGCTGACA+AGG 0.572145 1.3:+54235531 MS.gene71419:CDS
GTGGTTGAGTCCATTGCAAA+TGG 0.573506 1.3:+54234402 MS.gene71419:CDS
CACAACATATTTACTCTCTG+TGG 0.574191 1.3:+54235586 MS.gene71419:CDS
ATAACTTCGCGTGCAAGGAA+TGG 0.574555 1.3:-54235259 None:intergenic
GGGAGGACGGCTAATGCTTG+TGG 0.576293 1.3:+54234192 MS.gene71419:CDS
TCAAAAGAAATGGAGCCGAA+TGG 0.576334 1.3:+54235148 MS.gene71419:CDS
AGGAGGAAGTTGAAATTCTG+AGG 0.579813 1.3:+54235056 MS.gene71419:CDS
ATTATGATGTATGGACCGAC+TGG 0.580492 1.3:+54232878 MS.gene71419:CDS
AGTACAGTATATGAAGATGA+AGG 0.580728 1.3:+54235394 MS.gene71419:CDS
GTTTGGATGTTCGAAGCAGG+CGG 0.582763 1.3:+54232922 MS.gene71419:CDS
ATGTGAATCACCATTTGCAA+TGG 0.583556 1.3:-54234412 None:intergenic
AGAGCAGGATCATGATAAAG+TGG 0.584752 1.3:+54235429 MS.gene71419:CDS
GTTGATTACCTGCAGAAGCA+TGG 0.585396 1.3:-54234460 None:intergenic
ACAGATTCTGAGGGTAGTGA+TGG 0.586397 1.3:+54232989 MS.gene71419:CDS
AGATGGGGATACAGATTCTG+AGG 0.588686 1.3:+54232979 MS.gene71419:CDS
TCCTCATACCCCGGTTAAGG+AGG 0.589007 1.3:+54234706 MS.gene71419:CDS
GGAAACAGCTCCTGCAAGTG+AGG 0.597967 1.3:+54234892 MS.gene71419:CDS
AGTTCGTGGTCCTCATACCC+CGG 0.605308 1.3:+54234697 MS.gene71419:CDS
ATGTCCCAACAGTGGGAGGA+CGG 0.607165 1.3:+54234179 MS.gene71419:CDS
CTAGGGTAGAGATTGTCTTG+TGG 0.610211 1.3:-54234649 None:intergenic
AACAGCTCCTGCAAGTGAGG+AGG 0.610821 1.3:+54234895 MS.gene71419:CDS
TTGAGACGATGCTTTGAACG+TGG 0.613136 1.3:-54232533 None:intergenic
TCTTGGAATGGTGAAATCGA+TGG 0.615678 1.3:+54235213 MS.gene71419:CDS
GCTTAGTGTTTACAAAAGCA+CGG 0.616489 1.3:+54235186 MS.gene71419:CDS
AAATATAGCGCTGAAGAGAG+TGG 0.617437 1.3:+54234383 MS.gene71419:CDS
AAGGATATTGCAGCAGCAGG+AGG 0.618726 1.3:+54235039 MS.gene71419:CDS
CTCGATGTCCCAACAGTGGG+AGG 0.638434 1.3:+54234175 MS.gene71419:CDS
ATACTCGATGTCCCAACAGT+GGG 0.638772 1.3:+54234172 MS.gene71419:CDS
ATATATCTGGAAATGAAGCA+GGG 0.639127 1.3:+54233977 MS.gene71419:CDS
AGGTCAAACTTGAAGTGATG+GGG 0.643466 1.3:+54233932 MS.gene71419:intron
TTGGAAGAGGAAGAAGGTGT+GGG 0.648163 1.3:-54232482 None:intergenic
GAAATCGATGGATTTGGACA+TGG 0.652176 1.3:+54235225 MS.gene71419:CDS
GATACTCGATGTCCCAACAG+TGG 0.654849 1.3:+54234171 MS.gene71419:CDS
AAGCACGGATGATCTTGGAA+TGG 0.656263 1.3:+54235201 MS.gene71419:CDS
GAGTTCTAGAAGTCACTGCA+TGG 0.664378 1.3:+54234068 MS.gene71419:CDS
TTGGATGTTCGAAGCAGGCG+GGG 0.667487 1.3:+54232924 MS.gene71419:CDS
GATTAATGGTGTGAAATTGG+GGG 0.689277 1.3:+54232844 MS.gene71419:CDS
GATGGGGATACAGATTCTGA+GGG 0.693400 1.3:+54232980 MS.gene71419:CDS
AGAGTCTTCCTCCTTAACCG+GGG 0.728596 1.3:-54234714 None:intergenic
TGACTCTTACCAGAACCAGT+CGG 0.741916 1.3:-54232893 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTTAAAAACAAAATAGTT+TGG - chr1.3:54233510-54233529 None:intergenic 15.0%
!!! TAATTTGTACAAAATTTTGT+TGG + chr1.3:54233390-54233409 MS.gene71419:intron 15.0%
!! AAATGTACTATTATGATGTA+TGG + chr1.3:54232869-54232888 MS.gene71419:CDS 20.0%
!! ATATAGCTCAATAGTTTATA+TGG + chr1.3:54233428-54233447 MS.gene71419:intron 20.0%
!! CACACTCAATTAATTAAAAA+GGG - chr1.3:54233865-54233884 None:intergenic 20.0%
!! TCAATTAATTAAAAAGGGTA+TGG - chr1.3:54233860-54233879 None:intergenic 20.0%
!! TTAAAGAAAGAAAATCGATA+TGG - chr1.3:54234295-54234314 None:intergenic 20.0%
!! TTCAAATGAATCCTTAAAAA+GGG - chr1.3:54234573-54234592 None:intergenic 20.0%
!!! ATATTTATACACATTTTGGT+TGG + chr1.3:54233726-54233745 MS.gene71419:intron 20.0%
!!! ATGTTTTACTTATTATGTTC+CGG + chr1.3:54233663-54233682 MS.gene71419:intron 20.0%
!!! GTTCATATTTATACACATTT+TGG + chr1.3:54233722-54233741 MS.gene71419:intron 20.0%
! AAACTATTGAGCTATATAGA+TGG - chr1.3:54233425-54233444 None:intergenic 25.0%
! AATTCTTGATCCTAAAATGA+CGG - chr1.3:54234747-54234766 None:intergenic 25.0%
! CTTCAAATGAATCCTTAAAA+AGG - chr1.3:54234574-54234593 None:intergenic 25.0%
! GCACACTCAATTAATTAAAA+AGG - chr1.3:54233866-54233885 None:intergenic 25.0%
! GTTTATCATGAAGTTACAAA+TGG + chr1.3:54234781-54234800 MS.gene71419:CDS 25.0%
! TTCTAACTCTAGATCTATTA+GGG + chr1.3:54232721-54232740 MS.gene71419:CDS 25.0%
!! ATAGAGATTTTACTCTTGAT+GGG + chr1.3:54232762-54232781 MS.gene71419:CDS 25.0%
!! CATATCTAAGGTTTAAGATT+AGG + chr1.3:54233597-54233616 MS.gene71419:intron 25.0%
!! TATAGAGATTTTACTCTTGA+TGG + chr1.3:54232761-54232780 MS.gene71419:CDS 25.0%
!! TGTCCAAATACTTTGAAAAA+TGG + chr1.3:54235316-54235335 MS.gene71419:CDS 25.0%
!! TTAAGATTAGGATTGCTATT+TGG + chr1.3:54233609-54233628 MS.gene71419:intron 25.0%
!! TTTTCTGTTTTCCCTTTTTA+AGG + chr1.3:54234559-54234578 MS.gene71419:intron 25.0%
!! TTTTCTTTCTTTAATCTTGC+AGG + chr1.3:54234301-54234320 MS.gene71419:intron 25.0%
!!! ACTCCATTTTTCAAAGTATT+TGG - chr1.3:54235322-54235341 None:intergenic 25.0%
!!! ATTTTTCAAAGTATTTGGAC+AGG - chr1.3:54235317-54235336 None:intergenic 25.0%
!!! GAATCTTTGTTGTTGAAATT+GGG - chr1.3:54232614-54232633 None:intergenic 25.0%
!!! TGTTTTGGAGATTTATAATG+AGG + chr1.3:54233063-54233082 MS.gene71419:CDS 25.0%
!!! TTTTTCAAAGTATTTGGACA+GGG - chr1.3:54235316-54235335 None:intergenic 25.0%
AAGAATGCAACCTATATATC+TGG + chr1.3:54233964-54233983 MS.gene71419:CDS 30.0%
AAGGATTAATGGTGTGAAAT+TGG + chr1.3:54232841-54232860 MS.gene71419:CDS 30.0%
ACAAGAAATTTGTGGAATCA+AGG + chr1.3:54232822-54232841 MS.gene71419:CDS 30.0%
ACAAGAGTTGGAAAAGAAAT+TGG + chr1.3:54234958-54234977 MS.gene71419:CDS 30.0%
ACAAGTTAAATTGCAGAAGT+AGG - chr1.3:54233912-54233931 None:intergenic 30.0%
AGGAAAATAATGGTTCCAAT+AGG + chr1.3:54235551-54235570 MS.gene71419:CDS 30.0%
AGGATAAGATAAGCTTATCT+GGG + chr1.3:54233779-54233798 MS.gene71419:intron 30.0%
AGGATTAATGGTGTGAAATT+GGG + chr1.3:54232842-54232861 MS.gene71419:CDS 30.0%
AGTACAGTATATGAAGATGA+AGG + chr1.3:54235394-54235413 MS.gene71419:CDS 30.0%
ATATATCTGGAAATGAAGCA+GGG + chr1.3:54233977-54233996 MS.gene71419:CDS 30.0%
ATTCTCGCAATAACTTCAAT+TGG - chr1.3:54232650-54232669 None:intergenic 30.0%
CAGACTGCAAAAATTAATCA+AGG + chr1.3:54234360-54234379 MS.gene71419:intron 30.0%
CTCAAAAGAAATTCAGAAAG+TGG + chr1.3:54234005-54234024 MS.gene71419:CDS 30.0%
CTTGCTTGTAAAACAGATAA+AGG - chr1.3:54232701-54232720 None:intergenic 30.0%
CTTGTTCTACAAGAAATTTG+TGG + chr1.3:54232814-54232833 MS.gene71419:CDS 30.0%
GTCTAAGAACAATTCTTCAA+AGG + chr1.3:54233150-54233169 MS.gene71419:CDS 30.0%
GTTCTAACTCTAGATCTATT+AGG + chr1.3:54232720-54232739 MS.gene71419:CDS 30.0%
TAATTGAGTGTGCTAACATT+TGG + chr1.3:54233873-54233892 MS.gene71419:intron 30.0%
TATATATCTGGAAATGAAGC+AGG + chr1.3:54233976-54233995 MS.gene71419:CDS 30.0%
TCAGAAAATATTGAACAAGC+TGG + chr1.3:54234226-54234245 MS.gene71419:CDS 30.0%
TGAAAACGAGTCAAAAGAAA+TGG + chr1.3:54235138-54235157 MS.gene71419:CDS 30.0%
TGCTTCATTTCCAGATATAT+AGG - chr1.3:54233977-54233996 None:intergenic 30.0%
TGTGATGTAACATAACATGT+TGG + chr1.3:54233188-54233207 MS.gene71419:intron 30.0%
TGTTCTTCTGATCATATCTA+AGG + chr1.3:54233585-54233604 MS.gene71419:intron 30.0%
TTCATGAGCATATCACTAAA+CGG - chr1.3:54233637-54233656 None:intergenic 30.0%
TTCTCGCAATAACTTCAATT+GGG - chr1.3:54232649-54232668 None:intergenic 30.0%
TTCTTCAGATCATATGATTC+TGG + chr1.3:54233292-54233311 MS.gene71419:intron 30.0%
TTTGTGAGAATATAGCGAAA+CGG - chr1.3:54233346-54233365 None:intergenic 30.0%
TTTGTGGAATCAAGGATTAA+TGG + chr1.3:54232830-54232849 MS.gene71419:CDS 30.0%
! AGTCTGTTGTTGTACATTTT+AGG + chr1.3:54233263-54233282 MS.gene71419:intron 30.0%
! AGTTTTCTCATAAACCCATT+CGG - chr1.3:54235166-54235185 None:intergenic 30.0%
! TAGAGATTTTACTCTTGATG+GGG + chr1.3:54232763-54232782 MS.gene71419:CDS 30.0%
! TATGATCTTTTGTCCACTAA+TGG + chr1.3:54233091-54233110 MS.gene71419:CDS 30.0%
! TTGTTGTTGAAATTGGGATT+TGG - chr1.3:54232608-54232627 None:intergenic 30.0%
!! ACTTCTGCAATTTAACTTGT+AGG + chr1.3:54233912-54233931 MS.gene71419:intron 30.0%
!! GATCATATGATTCTGGAATT+TGG + chr1.3:54233299-54233318 MS.gene71419:intron 30.0%
!! GGAATCTTTGTTGTTGAAAT+TGG - chr1.3:54232615-54232634 None:intergenic 30.0%
!! TTGGCTTTAGGATTGTTATT+TGG + chr1.3:54233318-54233337 MS.gene71419:intron 30.0%
!! TTTTGTTCAGGTTACTGTTT+TGG + chr1.3:54233048-54233067 MS.gene71419:CDS 30.0%
!!! ACGACTTTTTTATTCTGATC+AGG + chr1.3:54234147-54234166 MS.gene71419:intron 30.0%
AAAGCGAAATGTATAGTTCG+TGG + chr1.3:54234683-54234702 MS.gene71419:CDS 35.0%
AAATTGCAGAAGTAGGAAAG+TGG - chr1.3:54233905-54233924 None:intergenic 35.0%
AACTTGGAATAACATGGAAC+AGG - chr1.3:54234517-54234536 None:intergenic 35.0%
AATTGTATGTGCTGAGCATT+TGG + chr1.3:54233529-54233548 MS.gene71419:intron 35.0%
ACAATCTCTACCCTAGAATA+TGG + chr1.3:54234656-54234675 MS.gene71419:CDS 35.0%
ACGAACTATACATTTCGCTT+TGG - chr1.3:54234684-54234703 None:intergenic 35.0%
AGAGCTAACTTGGAATAACA+TGG - chr1.3:54234523-54234542 None:intergenic 35.0%
ATAACTTCAATTGGGTGTTC+AGG - chr1.3:54232641-54232660 None:intergenic 35.0%
ATGTGAATCACCATTTGCAA+TGG - chr1.3:54234415-54234434 None:intergenic 35.0%
ATTGTCTTGTGGATCTCTTT+AGG - chr1.3:54234641-54234660 None:intergenic 35.0%
CAAAAAGCTCATGAAGAAAG+AGG + chr1.3:54234841-54234860 MS.gene71419:CDS 35.0%
CACAACATATTTACTCTCTG+TGG + chr1.3:54235586-54235605 MS.gene71419:CDS 35.0%
CACTTTCTTGTGTACTCTAT+AGG + chr1.3:54233559-54233578 MS.gene71419:intron 35.0%
CAGGATAAGATAAGCTTATC+TGG + chr1.3:54233778-54233797 MS.gene71419:intron 35.0%
CCAGAATAATCCTCTATCTT+CGG - chr1.3:54235523-54235542 None:intergenic 35.0%
CTATAGAGTACACAAGAAAG+TGG - chr1.3:54233561-54233580 None:intergenic 35.0%
CTCTAGATCTATTAGGGTTA+AGG + chr1.3:54232727-54232746 MS.gene71419:CDS 35.0%
GAGTTATCAAATGCGTTGAA+TGG - chr1.3:54232514-54232533 None:intergenic 35.0%
GATTAATGGTGTGAAATTGG+GGG + chr1.3:54232844-54232863 MS.gene71419:CDS 35.0%
GCTTAGTGTTTACAAAAGCA+CGG + chr1.3:54235186-54235205 MS.gene71419:CDS 35.0%
GGATTAATGGTGTGAAATTG+GGG + chr1.3:54232843-54232862 MS.gene71419:CDS 35.0%
GTTCTGATCGAATTTATCGT+TGG + chr1.3:54234114-54234133 MS.gene71419:intron 35.0%
TAACAAAAGTCCGAAGATAG+AGG + chr1.3:54235510-54235529 MS.gene71419:CDS 35.0%
TAGGTCAAACTTGAAGTGAT+GGG + chr1.3:54233931-54233950 MS.gene71419:intron 35.0%
TATGTTTGTGCACCAAACTT+TGG + chr1.3:54235355-54235374 MS.gene71419:CDS 35.0%
TGATAAAGTGGAAGAAGATG+AGG + chr1.3:54235441-54235460 MS.gene71419:CDS 35.0%
TGATCGAATTTATCGTTGGT+TGG + chr1.3:54234118-54234137 MS.gene71419:intron 35.0%
TGCTCTTTCTTTAACTCAGT+TGG + chr1.3:54233753-54233772 MS.gene71419:intron 35.0%
TGTGAAATCAAGTGAGAAGA+AGG + chr1.3:54235693-54235712 MS.gene71419:CDS 35.0%
TTCTTCTCACTTGATTTCAC+AGG - chr1.3:54235694-54235713 None:intergenic 35.0%
! AAAGCACTCTTTGTAATGAC+AGG + chr1.3:54234046-54234065 MS.gene71419:CDS 35.0%
! AACTTGGAAGCATACGTTAT+TGG + chr1.3:54235745-54235764 MS.gene71419:CDS 35.0%
! AAGCATCGTCTCAATTTCAA+TGG + chr1.3:54232542-54232561 MS.gene71419:CDS 35.0%
! AATGGTGAAATCGATGGATT+TGG + chr1.3:54235219-54235238 MS.gene71419:CDS 35.0%
! AGTGATGGTGATTCTTCTAA+AGG + chr1.3:54233004-54233023 MS.gene71419:CDS 35.0%
! GTGATGGTGATTCTTCTAAA+GGG + chr1.3:54233005-54233024 MS.gene71419:CDS 35.0%
! TTCTTTAACTCAGTTGGTTC+AGG + chr1.3:54233759-54233778 MS.gene71419:intron 35.0%
!! ATTAGGGTTAAGGCTGATTT+TGG + chr1.3:54232737-54232756 MS.gene71419:CDS 35.0%
!! CATGCTTTTTGACCAAAGTT+TGG - chr1.3:54235370-54235389 None:intergenic 35.0%
!! GTAAGTTTGCTGTCTCTAAA+AGG - chr1.3:54234441-54234460 None:intergenic 35.0%
!! TCTTCTAAAGGGTTTTGTCT+CGG + chr1.3:54233016-54233035 MS.gene71419:CDS 35.0%
!! TCTTCTTCAACCGTCATTTT+AGG + chr1.3:54234734-54234753 MS.gene71419:CDS 35.0%
!! TGAAATTGGGATTTGGTGAT+GGG - chr1.3:54232601-54232620 None:intergenic 35.0%
!! TGATTCTGGAATTTGGCTTT+AGG + chr1.3:54233306-54233325 MS.gene71419:intron 35.0%
!! TTGAAATTGGGATTTGGTGA+TGG - chr1.3:54232602-54232621 None:intergenic 35.0%
!!! CATCAGACCTCTTTTTTGTA+GGG - chr1.3:54235648-54235667 None:intergenic 35.0%
!!! TCATCAGACCTCTTTTTTGT+AGG - chr1.3:54235649-54235668 None:intergenic 35.0%
!!! TGTTTTAAGAGTGTCCAACA+AGG + chr1.3:54235720-54235739 MS.gene71419:CDS 35.0%
AAGAGGTGATAGAGGAAAAG+AGG + chr1.3:54235473-54235492 MS.gene71419:CDS 40.0%
ACCAAAAGGTCAACTGAGAT+CGG + chr1.3:54233689-54233708 MS.gene71419:intron 40.0%
AGAGCAGGATCATGATAAAG+TGG + chr1.3:54235429-54235448 MS.gene71419:CDS 40.0%
AGAGGAAGAGAATGGAAGAA+AGG + chr1.3:54235020-54235039 MS.gene71419:CDS 40.0%
AGAGGTGATAGAGGAAAAGA+GGG + chr1.3:54235474-54235493 MS.gene71419:CDS 40.0%
AGGAGGAAGTTGAAATTCTG+AGG + chr1.3:54235056-54235075 MS.gene71419:CDS 40.0%
AGGATCAAGAATTGCTGCAA+TGG + chr1.3:54234754-54234773 MS.gene71419:CDS 40.0%
AGGTCAAACTTGAAGTGATG+GGG + chr1.3:54233932-54233951 MS.gene71419:intron 40.0%
ATTATGATGTATGGACCGAC+TGG + chr1.3:54232878-54232897 MS.gene71419:CDS 40.0%
ATTGAACAAGCTGGTCAAAC+TGG + chr1.3:54234235-54234254 MS.gene71419:CDS 40.0%
ATTTGCTTGGAAGAGGAAGA+AGG - chr1.3:54232491-54232510 None:intergenic 40.0%
CAAAAGAAATGGAGCCGAAT+GGG + chr1.3:54235149-54235168 MS.gene71419:CDS 40.0%
CACCAATCCCTACAAAAAAG+AGG + chr1.3:54235638-54235657 MS.gene71419:CDS 40.0%
CAGCATCAAAAGAGCTAACT+TGG - chr1.3:54234533-54234552 None:intergenic 40.0%
CCGAAGATAGAGGATTATTC+TGG + chr1.3:54235520-54235539 MS.gene71419:CDS 40.0%
GGAGCTGACAAGGAAAATAA+TGG + chr1.3:54235541-54235560 MS.gene71419:CDS 40.0%
GGTAAGAGTCATACGATGTT+TGG + chr1.3:54232905-54232924 MS.gene71419:CDS 40.0%
GTAGGTCAAACTTGAAGTGA+TGG + chr1.3:54233930-54233949 MS.gene71419:intron 40.0%
GTGAATTCTCAGCATCCTAT+TGG - chr1.3:54235569-54235588 None:intergenic 40.0%
TACTCTCTGTGGAAACCAAA+GGG + chr1.3:54235597-54235616 MS.gene71419:CDS 40.0%
TCAAAAGAAATGGAGCCGAA+TGG + chr1.3:54235148-54235167 MS.gene71419:CDS 40.0%
TCTTGGAATGGTGAAATCGA+TGG + chr1.3:54235213-54235232 MS.gene71419:CDS 40.0%
TGAGGAGGAGATTAACCTAA+AGG + chr1.3:54234910-54234929 MS.gene71419:CDS 40.0%
TGAGGGATATTCTTGGAGAT+GGG + chr1.3:54232963-54232982 MS.gene71419:CDS 40.0%
TGAGTGTGCTAACATTTGGA+TGG + chr1.3:54233877-54233896 MS.gene71419:intron 40.0%
TTACTCTCTGTGGAAACCAA+AGG + chr1.3:54235596-54235615 MS.gene71419:CDS 40.0%
TTATGTTCCGGTACACCAAA+AGG + chr1.3:54233675-54233694 MS.gene71419:intron 40.0%
TTCTTCAAAGCATGAGCGTA+AGG + chr1.3:54235114-54235133 MS.gene71419:CDS 40.0%
TTGAGGGATATTCTTGGAGA+TGG + chr1.3:54232962-54232981 MS.gene71419:CDS 40.0%
TTTCCAACTCTTGTCTCAGA+TGG - chr1.3:54234952-54234971 None:intergenic 40.0%
! AAAGGCTTGTCTTTTCGATC+CGG - chr1.3:54232683-54232702 None:intergenic 40.0%
! AAATATAGCGCTGAAGAGAG+TGG + chr1.3:54234383-54234402 MS.gene71419:CDS 40.0%
! ACTTGAAGTGATGGGGAAAA+AGG + chr1.3:54233939-54233958 MS.gene71419:CDS 40.0%
! AGGGATTGGTGTTCCATATT+GGG - chr1.3:54235629-54235648 None:intergenic 40.0%
! ATGCGTTGAATGGATTTGCT+TGG - chr1.3:54232504-54232523 None:intergenic 40.0%
! GAAATCGATGGATTTGGACA+TGG + chr1.3:54235225-54235244 MS.gene71419:CDS 40.0%
! GATCTTTTGTCCACTAATGG+AGG + chr1.3:54233094-54233113 MS.gene71419:CDS 40.0%
! GATTGTGTATAGGGCTTTGA+GGG + chr1.3:54232946-54232965 MS.gene71419:CDS 40.0%
! TACAAAAGCACGGATGATCT+TGG + chr1.3:54235196-54235215 MS.gene71419:CDS 40.0%
! TAGGGATTGGTGTTCCATAT+TGG - chr1.3:54235630-54235649 None:intergenic 40.0%
! TCAAAGTATTTGGACAGGGT+TGG - chr1.3:54235312-54235331 None:intergenic 40.0%
! TGAAATTCTGAGGAAGAGAC+TGG + chr1.3:54235066-54235085 MS.gene71419:CDS 40.0%
! TGAATGGATTTGCTTGGAAG+AGG - chr1.3:54232498-54232517 None:intergenic 40.0%
! TGGATTTGAGGCAAAAATGC+AGG + chr1.3:54234255-54234274 MS.gene71419:CDS 40.0%
!! CTTCTAAAGGGTTTTGTCTC+GGG + chr1.3:54233017-54233036 MS.gene71419:CDS 40.0%
!! TTCTAAAGGGTTTTGTCTCG+GGG + chr1.3:54233018-54233037 MS.gene71419:CDS 40.0%
!! TTGTGGATCTCTTTAGGATC+AGG - chr1.3:54234635-54234654 None:intergenic 40.0%
!!! ATAGTTGCTTTTGTGGAAGG+TGG + chr1.3:54234092-54234111 MS.gene71419:intron 40.0%
!!! GACCTCTTTTTTGTAGGGAT+TGG - chr1.3:54235643-54235662 None:intergenic 40.0%
!!! GCATGGTATAGTTGCTTTTG+TGG + chr1.3:54234085-54234104 MS.gene71419:intron 40.0%
!!! GGTATAGTTGCTTTTGTGGA+AGG + chr1.3:54234089-54234108 MS.gene71419:intron 40.0%
AAGAGTCTTCCTCCTTAACC+GGG - chr1.3:54234718-54234737 None:intergenic 45.0%
AAGCACGGATGATCTTGGAA+TGG + chr1.3:54235201-54235220 MS.gene71419:CDS 45.0%
ACTTCAATTGGGTGTTCAGG+AGG - chr1.3:54232638-54232657 None:intergenic 45.0%
AGAAAGGATATTGCAGCAGC+AGG + chr1.3:54235036-54235055 MS.gene71419:CDS 45.0%
AGATGAGGAAGTGGAGAAAG+AGG + chr1.3:54235456-54235475 MS.gene71419:CDS 45.0%
AGATGGGGATACAGATTCTG+AGG + chr1.3:54232979-54232998 MS.gene71419:CDS 45.0%
AGCTGGTCAAACTGGATTTG+AGG + chr1.3:54234243-54234262 MS.gene71419:CDS 45.0%
AGTGGAAGAAGATGAGGAAG+TGG + chr1.3:54235447-54235466 MS.gene71419:CDS 45.0%
AGTGGAGAAAGAGGTGATAG+AGG + chr1.3:54235465-54235484 MS.gene71419:CDS 45.0%
AGTGTCCAACAAGGAGAACT+TGG + chr1.3:54235729-54235748 MS.gene71419:CDS 45.0%
ATAACTTCGCGTGCAAGGAA+TGG - chr1.3:54235262-54235281 None:intergenic 45.0%
ATACTCGATGTCCCAACAGT+GGG + chr1.3:54234172-54234191 MS.gene71419:CDS 45.0%
CAAACTTACCATGCTTCTGC+AGG + chr1.3:54234452-54234471 MS.gene71419:CDS 45.0%
CAACTCTTGTCTCAGATGGA+GGG - chr1.3:54234948-54234967 None:intergenic 45.0%
CTAGGGTAGAGATTGTCTTG+TGG - chr1.3:54234652-54234671 None:intergenic 45.0%
CTCCAGCTCAACAAACTCAT+TGG - chr1.3:54235002-54235021 None:intergenic 45.0%
CTTCAATTGGGTGTTCAGGA+GGG - chr1.3:54232637-54232656 None:intergenic 45.0%
CTTGCACGCGAAGTTATTGT+CGG + chr1.3:54235265-54235284 MS.gene71419:CDS 45.0%
GAAGAGTCTTCCTCCTTAAC+CGG - chr1.3:54234719-54234738 None:intergenic 45.0%
GAAGTTATTGTCGGCATGCA+AGG + chr1.3:54235274-54235293 MS.gene71419:CDS 45.0%
GAGGGATATTCTTGGAGATG+GGG + chr1.3:54232964-54232983 MS.gene71419:CDS 45.0%
GATGGGGATACAGATTCTGA+GGG + chr1.3:54232980-54232999 MS.gene71419:CDS 45.0%
GATGTTTGGATGTTCGAAGC+AGG + chr1.3:54232919-54232938 MS.gene71419:CDS 45.0%
GGATTGTGTATAGGGCTTTG+AGG + chr1.3:54232945-54232964 MS.gene71419:CDS 45.0%
GGGTTCGTTCGTTTACCTTT+AGG - chr1.3:54234928-54234947 None:intergenic 45.0%
GTGGTTGAGTCCATTGCAAA+TGG + chr1.3:54234402-54234421 MS.gene71419:CDS 45.0%
GTTGATTACCTGCAGAAGCA+TGG - chr1.3:54234463-54234482 None:intergenic 45.0%
TGACTCTTACCAGAACCAGT+CGG - chr1.3:54232896-54232915 None:intergenic 45.0%
TGCTGTGCTAAGAGCTAAAG+TGG + chr1.3:54234871-54234890 MS.gene71419:CDS 45.0%
TGCTTCCAAGTTCTCCTTGT+TGG - chr1.3:54235737-54235756 None:intergenic 45.0%
TTAATCTCCTCCTCACTTGC+AGG - chr1.3:54234905-54234924 None:intergenic 45.0%
TTCAATTGGGTGTTCAGGAG+GGG - chr1.3:54232636-54232655 None:intergenic 45.0%
TTCAGAAAGTGGAGAAGCGA+AGG + chr1.3:54234016-54234035 MS.gene71419:CDS 45.0%
! AAGGCTTGTCTTTTCGATCC+GGG - chr1.3:54232682-54232701 None:intergenic 45.0%
! ACAGATTCTGAGGGTAGTGA+TGG + chr1.3:54232989-54233008 MS.gene71419:CDS 45.0%
! CGCTTTGGCTCCATATTCTA+GGG - chr1.3:54234669-54234688 None:intergenic 45.0%
! CTTTTGTCCACTAATGGAGG+TGG + chr1.3:54233097-54233116 MS.gene71419:CDS 45.0%
! TCCGATCTCAGTTGACCTTT+TGG - chr1.3:54233693-54233712 None:intergenic 45.0%
! TCGCTTTGGCTCCATATTCT+AGG - chr1.3:54234670-54234689 None:intergenic 45.0%
! TGTTTCTGAGGAAGAGGAAC+TGG + chr1.3:54232790-54232809 MS.gene71419:CDS 45.0%
! TTGAGACGATGCTTTGAACG+TGG - chr1.3:54232536-54232555 None:intergenic 45.0%
! TTGGAAGAGGAAGAAGGTGT+GGG - chr1.3:54232485-54232504 None:intergenic 45.0%
!! AGGGCTTTGAGGGATATTCT+TGG + chr1.3:54232956-54232975 MS.gene71419:CDS 45.0%
!! ATGAGTTTGTTGAGCTGGAG+AGG + chr1.3:54235002-54235021 MS.gene71419:CDS 45.0%
!! CAGTTGACCTTTTGGTGTAC+CGG - chr1.3:54233685-54233704 None:intergenic 45.0%
!! GACCAATGAGTTTGTTGAGC+TGG + chr1.3:54234997-54235016 MS.gene71419:CDS 45.0%
!! GAGTTCTAGAAGTCACTGCA+TGG + chr1.3:54234068-54234087 MS.gene71419:CDS 45.0%
!! GGATTATTCTGGAGCTGACA+AGG + chr1.3:54235531-54235550 MS.gene71419:CDS 45.0%
!! GTATTTGGACAGGGTTGGTT+TGG - chr1.3:54235307-54235326 None:intergenic 45.0%
AAGGATATTGCAGCAGCAGG+AGG + chr1.3:54235039-54235058 MS.gene71419:CDS 50.0%
ACGGCTAATGCTTGTGGACA+TGG + chr1.3:54234198-54234217 MS.gene71419:CDS 50.0%
AGAGTCTTCCTCCTTAACCG+GGG - chr1.3:54234717-54234736 None:intergenic 50.0%
AGGAGAAGAAGAAGCAGAGC+AGG + chr1.3:54235414-54235433 MS.gene71419:CDS 50.0%
CAAAGGGAGCTCTCCCAATA+TGG + chr1.3:54235613-54235632 MS.gene71419:CDS 50.0%
CATATTGGGAGAGCTCCCTT+TGG - chr1.3:54235615-54235634 None:intergenic 50.0%
CCAACTCTTGTCTCAGATGG+AGG - chr1.3:54234949-54234968 None:intergenic 50.0%
CGACAATAACTTCGCGTGCA+AGG - chr1.3:54235267-54235286 None:intergenic 50.0%
CTAATGCTTGTGGACATGGC+AGG + chr1.3:54234202-54234221 MS.gene71419:CDS 50.0%
CTTGGAAGAGGAAGAAGGTG+TGG - chr1.3:54232486-54232505 None:intergenic 50.0%
GATACTCGATGTCCCAACAG+TGG + chr1.3:54234171-54234190 MS.gene71419:CDS 50.0%
GTTTGGATGTTCGAAGCAGG+CGG + chr1.3:54232922-54232941 MS.gene71419:CDS 50.0%
TGAGCTGGAGAGGAAGAGAA+TGG + chr1.3:54235012-54235031 MS.gene71419:CDS 50.0%
TGCGAGAATTCGTGACTACC+CGG + chr1.3:54232661-54232680 MS.gene71419:CDS 50.0%
TTGTCCACTAATGGAGGTGG+TGG + chr1.3:54233100-54233119 MS.gene71419:CDS 50.0%
TTTGGATGTTCGAAGCAGGC+GGG + chr1.3:54232923-54232942 MS.gene71419:CDS 50.0%
! ATGTATGGACCGACTGGTTC+TGG + chr1.3:54232884-54232903 MS.gene71419:CDS 50.0%
! CCTCCATCTGAGACAAGAGT+TGG + chr1.3:54234946-54234965 MS.gene71419:CDS 50.0%
! GTGGAGGGTTTGGATTTGGT+TGG + chr1.3:54233128-54233147 MS.gene71419:CDS 50.0%
!! GGTGTCTGTTTCTGAGGAAG+AGG + chr1.3:54232784-54232803 MS.gene71419:CDS 50.0%
!! TGATGGGGTGTCTGTTTCTG+AGG + chr1.3:54232778-54232797 MS.gene71419:CDS 50.0%
!! TTGGGATTTGGTGATGGGTG+TGG - chr1.3:54232596-54232615 None:intergenic 50.0%
!! TTTGGTGATGGGTGTGGATG+TGG - chr1.3:54232590-54232609 None:intergenic 50.0%
AACAGCTCCTGCAAGTGAGG+AGG + chr1.3:54234895-54234914 MS.gene71419:CDS 55.0%
AGCAGGCGGGGATTGTGTAT+AGG + chr1.3:54232936-54232955 MS.gene71419:CDS 55.0%
AGTTCGTGGTCCTCATACCC+CGG + chr1.3:54234697-54234716 MS.gene71419:CDS 55.0%
ATGTCCCAACAGTGGGAGGA+CGG + chr1.3:54234179-54234198 MS.gene71419:CDS 55.0%
ATTAGCCGTCCTCCCACTGT+TGG - chr1.3:54234187-54234206 None:intergenic 55.0%
GCAGGCGGGGATTGTGTATA+GGG + chr1.3:54232937-54232956 MS.gene71419:CDS 55.0%
GGAAACAGCTCCTGCAAGTG+AGG + chr1.3:54234892-54234911 MS.gene71419:CDS 55.0%
GGAGGTGGAGGGTTTGGATT+TGG + chr1.3:54233124-54233143 MS.gene71419:CDS 55.0%
TCCACCACCACCTCCATTAG+TGG - chr1.3:54233107-54233126 None:intergenic 55.0%
TCCTCATACCCCGGTTAAGG+AGG + chr1.3:54234706-54234725 MS.gene71419:CDS 55.0%
TCCTCCTTAACCGGGGTATG+AGG - chr1.3:54234710-54234729 None:intergenic 55.0%
TGGTCCTCATACCCCGGTTA+AGG + chr1.3:54234703-54234722 MS.gene71419:CDS 55.0%
TTAGCCGTCCTCCCACTGTT+GGG - chr1.3:54234186-54234205 None:intergenic 55.0%
TTGGATGTTCGAAGCAGGCG+GGG + chr1.3:54232924-54232943 MS.gene71419:CDS 55.0%
! CGGGGTGAGGACTTTTGTTC+AGG + chr1.3:54233036-54233055 MS.gene71419:CDS 55.0%
! TCCACTAATGGAGGTGGTGG+TGG + chr1.3:54233103-54233122 MS.gene71419:CDS 55.0%
!! AAGGGTTTTGTCTCGGGGTG+AGG + chr1.3:54233023-54233042 MS.gene71419:CDS 55.0%
!! ACTAATGGAGGTGGTGGTGG+AGG + chr1.3:54233106-54233125 MS.gene71419:CDS 55.0%
CTCGATGTCCCAACAGTGGG+AGG + chr1.3:54234175-54234194 MS.gene71419:CDS 60.0%
GGGAGGACGGCTAATGCTTG+TGG + chr1.3:54234192-54234211 MS.gene71419:CDS 60.0%
! GGATGTGGTGGTGTAGGTGC+TGG - chr1.3:54232575-54232594 None:intergenic 60.0%
! GGGTGTGGATGTGGTGGTGT+AGG - chr1.3:54232581-54232600 None:intergenic 60.0%
!! AATGGAGGTGGTGGTGGAGG+TGG + chr1.3:54233109-54233128 MS.gene71419:CDS 60.0%
!! GGTGATGGGTGTGGATGTGG+TGG - chr1.3:54232587-54232606 None:intergenic 60.0%
!! GAGGTGGTGGTGGAGGTGGA+GGG + chr1.3:54233113-54233132 MS.gene71419:CDS 65.0%
!! GGTGGTGGAGGTGGAGGGTT+TGG + chr1.3:54233118-54233137 MS.gene71419:CDS 65.0%
!! GGAGGTGGTGGTGGAGGTGG+AGG + chr1.3:54233112-54233131 MS.gene71419:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 54232476 54235774 54232476 ID=MS.gene71419
chr1.3 mRNA 54232476 54235774 54232476 ID=MS.gene71419.t1;Parent=MS.gene71419
chr1.3 exon 54232476 54233171 54232476 ID=MS.gene71419.t1.exon1;Parent=MS.gene71419.t1
chr1.3 CDS 54232476 54233171 54232476 ID=cds.MS.gene71419.t1;Parent=MS.gene71419.t1
chr1.3 exon 54233934 54234089 54233934 ID=MS.gene71419.t1.exon2;Parent=MS.gene71419.t1
chr1.3 CDS 54233934 54234089 54233934 ID=cds.MS.gene71419.t1;Parent=MS.gene71419.t1
chr1.3 exon 54234169 54234276 54234169 ID=MS.gene71419.t1.exon3;Parent=MS.gene71419.t1
chr1.3 CDS 54234169 54234276 54234169 ID=cds.MS.gene71419.t1;Parent=MS.gene71419.t1
chr1.3 exon 54234363 54234473 54234363 ID=MS.gene71419.t1.exon4;Parent=MS.gene71419.t1
chr1.3 CDS 54234363 54234473 54234363 ID=cds.MS.gene71419.t1;Parent=MS.gene71419.t1
chr1.3 exon 54234581 54235774 54234581 ID=MS.gene71419.t1.exon5;Parent=MS.gene71419.t1
chr1.3 CDS 54234581 54235774 54234581 ID=cds.MS.gene71419.t1;Parent=MS.gene71419.t1
Gene Sequence

>MS.gene71419

ATGGCTCCCACACCTTCTTCCTCTTCCAAGCAAATCCATTCAACGCATTTGATAACTCCACGTTCAAAGCATCGTCTCAATTTCAATGGTCTCAAACCAGCACCTACACCACCACATCCACACCCATCACCAAATCCCAATTTCAACAACAAAGATTCCCCTCCTGAACACCCAATTGAAGTTATTGCGAGAATTCGTGACTACCCGGATCGAAAAGACAAGCCTTTATCTGTTTTACAAGCAAGTTCTAACTCTAGATCTATTAGGGTTAAGGCTGATTTTGGTTATAGAGATTTTACTCTTGATGGGGTGTCTGTTTCTGAGGAAGAGGAACTGGACTTGTTCTACAAGAAATTTGTGGAATCAAGGATTAATGGTGTGAAATTGGGGGATAAATGTACTATTATGATGTATGGACCGACTGGTTCTGGTAAGAGTCATACGATGTTTGGATGTTCGAAGCAGGCGGGGATTGTGTATAGGGCTTTGAGGGATATTCTTGGAGATGGGGATACAGATTCTGAGGGTAGTGATGGTGATTCTTCTAAAGGGTTTTGTCTCGGGGTGAGGACTTTTGTTCAGGTTACTGTTTTGGAGATTTATAATGAGGAGATTTATGATCTTTTGTCCACTAATGGAGGTGGTGGTGGAGGTGGAGGGTTTGGATTTGGTTGGTCTAAGAACAATTCTTCAAAGGTAATAATATAGTACATGTGATGTAACATAACATGTTGGTTTCATCATTTGATCTGTTTTTTGTTTTGTTATGTTTGCTTCAAATGTGTTTAGTCTGTTGTTGTACATTTTAGGTTTTTGTTCTTCAGATCATATGATTCTGGAATTTGGCTTTAGGATTGTTATTTGGCTCCGTTTCGCTATATTCTCACAAAATTTGTATGTTTTAGTTATTTTCATAATTTGTACAAAATTTTGTTGGTTAAATTTACCATCTATATAGCTCAATAGTTTATATGGACTAGTTATTATTCAAATCAATATTAAACATCAGATGTTAGTTTTGAAAGTGTTAACCAAACTATTTTGTTTTTAACTAATTGTATGTGCTGAGCATTTGGATAGTGCCACTTTCTTGTGTACTCTATAGGTTTTGTTCTTCTGATCATATCTAAGGTTTAAGATTAGGATTGCTATTTGGCTCCGTTTAGTGATATGCTCATGAAGTTTGCATGTTTTACTTATTATGTTCCGGTACACCAAAAGGTCAACTGAGATCGGAACAACTTATGTTCATATTTATACACATTTTGGTTGGAATTTGCTCTTTCTTTAACTCAGTTGGTTCAGGATAAGATAAGCTTATCTGGGCTAGTTATTCATACTAATATTAAAAATCAGATGTTTGTTTGAAGTGTTAACTGAACCATACCCTTTTTAATTAATTGAGTGTGCTAACATTTGGATGGTGCCACTTTCCTACTTCTGCAATTTAACTTGTAGGTCAAACTTGAAGTGATGGGGAAAAAGGCTAAGAATGCAACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACTCTTTGTAATGACAGGAGTTCTAGAAGTCACTGCATGGTATAGTTGCTTTTGTGGAAGGTGGTTCTGATCGAATTTATCGTTGGTTGGTAACTGACGACTTTTTTATTCTGATCAGGTGATACTCGATGTCCCAACAGTGGGAGGACGGCTAATGCTTGTGGACATGGCAGGATCAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCAAAAATGCAGGTTATTATTTTTCTGCCATATCGATTTTCTTTCTTTAATCTTGCAGGTTCTCTACTGATTATATAACACTGTTGATGAATTTACAGACTGCAAAAATTAATCAAGGAAATATAGCGCTGAAGAGAGTGGTTGAGTCCATTGCAAATGGTGATTCACATGTGCCTTTTAGAGACAGCAAACTTACCATGCTTCTGCAGGTAATCAACTAATTATTATTTTTTAGTTAATTGCTTGATTCCTGTTCCATGTTATTCCAAGTTAGCTCTTTTGATGCTGAGTATTTTTTCTGTTTTCCCTTTTTAAGGATTCATTTGAAGATGATAAGTCAAAAATTCTAATGATACTATGCGCAAGTCCTGATCCTAAAGAGATCCACAAGACAATCTCTACCCTAGAATATGGAGCCAAAGCGAAATGTATAGTTCGTGGTCCTCATACCCCGGTTAAGGAGGAAGACTCTTCTTCAACCGTCATTTTAGGATCAAGAATTGCTGCAATGGATGAGTTTATCATGAAGTTACAAATGGAAAACAAGCTAAGAGAGAAAGAGCGAAACGAAGCGCACAAAAAGCTCATGAAGAAAGAGGAAGAAATTGCTGTGCTAAGAGCTAAAGTGGAAACAGCTCCTGCAAGTGAGGAGGAGATTAACCTAAAGGTAAACGAACGAACCCTCCATCTGAGACAAGAGTTGGAAAAGAAATTGGAAGAGTGTCAAAGAATGACCAATGAGTTTGTTGAGCTGGAGAGGAAGAGAATGGAAGAAAGGATATTGCAGCAGCAGGAGGAAGTTGAAATTCTGAGGAAGAGACTGGAAGAAATTGAGTTGCAGCTGTGCAGTTCTTCAAAGCATGAGCGTAAGGATGAAAACGAGTCAAAAGAAATGGAGCCGAATGGGTTTATGAGAAAACTGCTTAGTGTTTACAAAAGCACGGATGATCTTGGAATGGTGAAATCGATGGATTTGGACATGGACGATCAAGAACCATTCCTTGCACGCGAAGTTATTGTCGGCATGCAAGGCATTTCACCAAACCAACCCTGTCCAAATACTTTGAAAAATGGAGTACAAGAAGATGCTTATGTTTGTGCACCAAACTTTGGTCAAAAAGCATGTCTCAGTACAGTATATGAAGATGAAGGAGAAGAAGAAGCAGAGCAGGATCATGATAAAGTGGAAGAAGATGAGGAAGTGGAGAAAGAGGTGATAGAGGAAAAGAGGGTATGTAGTGTTGTTAACAAAAGTCCGAAGATAGAGGATTATTCTGGAGCTGACAAGGAAAATAATGGTTCCAATAGGATGCTGAGAATTCACAACATATTTACTCTCTGTGGAAACCAAAGGGAGCTCTCCCAATATGGAACACCAATCCCTACAAAAAAGAGGTCTGATGAAAGTTTTGATTTCAAATGTTCTCCTGTGAAATCAAGTGAGAAGAAGGATTCTGTTTTAAGAGTGTCCAACAAGGAGAACTTGGAAGCATACGTTATTGGAAATTAG
Protein sequence

>MS.gene71419.t1

MAPTPSSSSKQIHSTHLITPRSKHRLNFNGLKPAPTPPHPHPSPNPNFNNKDSPPEHPIEVIARIRDYPDRKDKPLSVLQASSNSRSIRVKADFGYRDFTLDGVSVSEEEELDLFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRALRDILGDGDTDSEGSDGDSSKGFCLGVRTFVQVTVLEIYNEEIYDLLSTNGGGGGGGGFGFGWSKNNSSKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKEEDSSSTVILGSRIAAMDEFIMKLQMENKLREKERNEAHKKLMKKEEEIAVLRAKVETAPASEEEINLKVNERTLHLRQELEKKLEECQRMTNEFVELERKRMEERILQQQEEVEILRKRLEEIELQLCSSSKHERKDENESKEMEPNGFMRKLLSVYKSTDDLGMVKSMDLDMDDQEPFLAREVIVGMQGISPNQPCPNTLKNGVQEDAYVCAPNFGQKACLSTVYEDEGEEEAEQDHDKVEEDEEVEKEVIEEKRVCSVVNKSPKIEDYSGADKENNGSNRMLRIHNIFTLCGNQRELSQYGTPIPTKKRSDESFDFKCSPVKSSEKKDSVLRVSNKENLEAYVIGN