Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056057.t1 | KEH31088.1 | 70.5 | 78 | 21 | 1 | 77 | 152 | 211 | 288 | 1.80E-17 | 100.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056057.t1 | A0A072UPU4 | 70.5 | 78 | 21 | 1 | 77 | 152 | 211 | 288 | 1.3e-17 | 100.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056057 | MS.gene30858 | 0.809626 | 1.72E-50 | -1.69E-46 |
| MS.gene056057 | MS.gene55544 | 0.80586 | 1.09E-49 | -1.69E-46 |
| MS.gene056057 | MS.gene55902 | 0.802179 | 6.34E-49 | -1.69E-46 |
| MS.gene056057 | MS.gene71811 | 0.919836 | 2.73E-87 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056057.t1 | MTR_8g010370 | 52.252 | 111 | 25 | 2 | 139 | 222 | 146 | 255 | 1.74e-24 | 102 |
| MS.gene056057.t1 | MTR_4g088945 | 69.620 | 79 | 22 | 1 | 76 | 152 | 210 | 288 | 2.44e-24 | 102 |
| MS.gene056057.t1 | MTR_2g104470 | 61.176 | 85 | 6 | 1 | 165 | 222 | 19 | 103 | 5.11e-24 | 96.7 |
| MS.gene056057.t1 | MTR_4g017520 | 58.065 | 93 | 7 | 2 | 157 | 222 | 16 | 103 | 2.40e-23 | 97.1 |
| MS.gene056057.t1 | MTR_4g086835 | 60.494 | 81 | 5 | 1 | 304 | 357 | 323 | 403 | 2.08e-21 | 95.5 |
| MS.gene056057.t1 | MTR_4g086835 | 60.494 | 81 | 5 | 1 | 304 | 357 | 322 | 402 | 2.32e-21 | 95.5 |
| MS.gene056057.t1 | MTR_8g064930 | 93.939 | 33 | 2 | 0 | 273 | 305 | 8 | 40 | 1.02e-16 | 73.9 |
| MS.gene056057.t1 | MTR_1g101540 | 63.462 | 52 | 18 | 1 | 86 | 137 | 207 | 257 | 3.08e-11 | 64.7 |
| MS.gene056057.t1 | MTR_5g082250 | 72.222 | 36 | 10 | 0 | 46 | 81 | 33 | 68 | 7.98e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 56 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTAGTTCTTGGAGGTTTA+TGG | 0.186325 | 1.1:+61571996 | MS.gene056057:CDS |
| GTCAAAATTTACATATTTCT+TGG | 0.239711 | 1.1:-61572134 | None:intergenic |
| GACTTGGATTCTTTGGTAAT+TGG | 0.240802 | 1.1:+61572244 | MS.gene056057:CDS |
| TTGATTGGACTTGGATTCTT+TGG | 0.249753 | 1.1:+61572237 | MS.gene056057:CDS |
| GTAAGAACCCTCTTTAATAA+AGG | 0.253009 | 1.1:-61568244 | None:intergenic |
| CTGACAGTTTCGACACAATT+AGG | 0.262315 | 1.1:+61566816 | MS.gene056057:CDS |
| CTGGAATTTGAAGACATATA+TGG | 0.318108 | 1.1:+61570956 | MS.gene056057:CDS |
| GATCACTCTGTTGTAGTTCT+TGG | 0.319431 | 1.1:+61571986 | MS.gene056057:CDS |
| TAAGAACCCTCTTTAATAAA+GGG | 0.351761 | 1.1:-61568243 | None:intergenic |
| GAAACTGTTGAGGAGCTTCT+TGG | 0.355010 | 1.1:+61568094 | MS.gene056057:CDS |
| TTTCCACCATCTCAGCATAT+TGG | 0.372188 | 1.1:+61570903 | MS.gene056057:CDS |
| GAGCATGGAAGGCTTTGAAT+TGG | 0.390401 | 1.1:+61568713 | MS.gene056057:CDS |
| CACTCTGTTGTAGTTCTTGG+AGG | 0.391490 | 1.1:+61571989 | MS.gene056057:CDS |
| GTATTCTAGGAGAATTTGAT+TGG | 0.403456 | 1.1:+61572222 | MS.gene056057:intron |
| TAGGAGAATTTGATTGGACT+TGG | 0.411989 | 1.1:+61572228 | MS.gene056057:intron |
| TATGAGTGGGTTGTGTTATG+AGG | 0.422892 | 1.1:+61570581 | MS.gene056057:CDS |
| AAGTTATTGTCAAGTCAAAT+AGG | 0.442406 | 1.1:+61570366 | MS.gene056057:CDS |
| ACAATGGTGACGTTTCGCTT+CGG | 0.463366 | 1.1:-61571641 | None:intergenic |
| AGTAAACTCTGCCACTGAAA+TGG | 0.470878 | 1.1:-61567596 | None:intergenic |
| TGAGGGCAACTTACATATCC+AGG | 0.488191 | 1.1:+61570599 | MS.gene056057:CDS |
| GGGAAACAAATCTCATTTGA+AGG | 0.490654 | 1.1:+61570322 | MS.gene056057:CDS |
| GGTACCTAATAGAATTATGC+AGG | 0.514795 | 1.1:-61569504 | None:intergenic |
| AGGTTGGCCCTTTATTAAAG+AGG | 0.520868 | 1.1:+61568236 | MS.gene056057:CDS |
| GTGGCAGAGTTTACTGCTCC+CGG | 0.525626 | 1.1:+61567604 | MS.gene056057:CDS |
| GAGTCATTGTATTGTTCTTG+AGG | 0.529959 | 1.1:-61572022 | None:intergenic |
| CTTTAATAAAGGGCCAACCT+TGG | 0.537472 | 1.1:-61568233 | None:intergenic |
| TTTCAGGGATTAAGAATCAA+GGG | 0.540034 | 1.1:+61570302 | MS.gene056057:intron |
| CTCTTCCAAAGGTGATAGCA+TGG | 0.542728 | 1.1:+61572042 | MS.gene056057:CDS |
| AACTGTCAGTTGCGTTTCAG+AGG | 0.548651 | 1.1:-61566802 | None:intergenic |
| TTTATTGTGTAGGTATGAAG+AGG | 0.552831 | 1.1:+61568065 | MS.gene056057:intron |
| TGATCAGTACCACTTGCAGC+TGG | 0.553337 | 1.1:-61571968 | None:intergenic |
| TTATTGTGTAGGTATGAAGA+GGG | 0.556937 | 1.1:+61568066 | MS.gene056057:intron |
| TCATCACCAATATGCTGAGA+TGG | 0.559689 | 1.1:-61570909 | None:intergenic |
| GAACTCTCCGCGTATGAAGT+CGG | 0.562568 | 1.1:-61571946 | None:intergenic |
| GTAGCATCAGAGAGCATGGA+AGG | 0.563587 | 1.1:+61568702 | MS.gene056057:intron |
| ATGAGTGGGTTGTGTTATGA+GGG | 0.574980 | 1.1:+61570582 | MS.gene056057:CDS |
| GGTTGGCCCTTTATTAAAGA+GGG | 0.576911 | 1.1:+61568237 | MS.gene056057:CDS |
| TTTATGAAGGAAACCAAGGT+TGG | 0.580339 | 1.1:+61568220 | MS.gene056057:CDS |
| GATTTCTACAAATAAGCTTG+AGG | 0.582194 | 1.1:+61568792 | MS.gene056057:CDS |
| GCAACATTATGTAGTCGTCA+AGG | 0.584295 | 1.1:-61571613 | None:intergenic |
| CAGGTTTATGAAGGAAACCA+AGG | 0.584503 | 1.1:+61568216 | MS.gene056057:intron |
| TAATTTGCTAGGACAAGGCA+AGG | 0.597697 | 1.1:+61571555 | MS.gene056057:intron |
| TCACCAATATGCTGAGATGG+TGG | 0.601205 | 1.1:-61570906 | None:intergenic |
| CAACATTATGTAGTCGTCAA+GGG | 0.601787 | 1.1:-61571612 | None:intergenic |
| AGGTTGCGAGATTATATGAG+TGG | 0.605845 | 1.1:+61570567 | MS.gene056057:intron |
| TGTTGATTCGTCCATTTCAG+TGG | 0.613839 | 1.1:+61567585 | MS.gene056057:CDS |
| GAGGGTTAGAGAAACTGTTG+AGG | 0.623078 | 1.1:+61568084 | MS.gene056057:CDS |
| CAATACAATGACTCTTCCAA+AGG | 0.638042 | 1.1:+61572031 | MS.gene056057:CDS |
| TACTCTTTAGCAAAACACGT+TGG | 0.638810 | 1.1:-61571581 | None:intergenic |
| CGGAGAGTTCCAGCTGCAAG+TGG | 0.640628 | 1.1:+61571959 | MS.gene056057:CDS |
| TTATTGACGATAGTTATCTG+TGG | 0.643786 | 1.1:+61568751 | MS.gene056057:CDS |
| ATGATGATGATAATGATGCA+TGG | 0.665315 | 1.1:+61569447 | MS.gene056057:CDS |
| AGAAATACCGACTTCATACG+CGG | 0.668200 | 1.1:+61571939 | MS.gene056057:intron |
| TTAGATGCAGCATGTAACTG+AGG | 0.670877 | 1.1:-61568487 | None:intergenic |
| TAAGAGATTCGACATTCACA+TGG | 0.677655 | 1.1:+61568507 | MS.gene056057:CDS |
| GGTTGCGAGATTATATGAGT+GGG | 0.681349 | 1.1:+61570568 | MS.gene056057:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACTCTATAAATTATATT+TGG | + | chr1.1:61569010-61569029 | MS.gene056057:intron | 10.0% |
| !!! | AACAATAATAGTTTATTTTA+AGG | - | chr1.1:61569528-61569547 | None:intergenic | 10.0% |
| !! | AATTTAATTGTTTCAAATTC+TGG | + | chr1.1:61566951-61566970 | MS.gene056057:intron | 15.0% |
| !! | ATATAAAAAAAATGTAACGT+AGG | - | chr1.1:61569568-61569587 | None:intergenic | 15.0% |
| !! | ATGTGAAAATATACAAAAAT+TGG | - | chr1.1:61570854-61570873 | None:intergenic | 15.0% |
| !! | TATATATTAAAACTTAAGTG+AGG | - | chr1.1:61567164-61567183 | None:intergenic | 15.0% |
| !! | TTAAACTAAGTAATACTTTA+AGG | - | chr1.1:61567853-61567872 | None:intergenic | 15.0% |
| !! | TTTAAAAACCATAAGAAATT+TGG | - | chr1.1:61569304-61569323 | None:intergenic | 15.0% |
| !!! | AATAAAAGAAGACTATTTTT+AGG | - | chr1.1:61570815-61570834 | None:intergenic | 15.0% |
| !!! | AATTGGTAAATTTTTATACA+GGG | + | chr1.1:61569110-61569129 | MS.gene056057:intron | 15.0% |
| !!! | ACTAAATATCATTTTAAAAG+GGG | - | chr1.1:61568895-61568914 | None:intergenic | 15.0% |
| !!! | ATAAAAGAAGACTATTTTTA+GGG | - | chr1.1:61570814-61570833 | None:intergenic | 15.0% |
| !!! | ATTTTTAAACATAAAGTGTT+AGG | + | chr1.1:61569963-61569982 | MS.gene056057:intron | 15.0% |
| !!! | GACTAAATATCATTTTAAAA+GGG | - | chr1.1:61568896-61568915 | None:intergenic | 15.0% |
| !!! | TTACTTAATCTTACATTTTT+TGG | - | chr1.1:61569344-61569363 | None:intergenic | 15.0% |
| !!! | TTTACTATTTTTTATGTTAC+AGG | + | chr1.1:61568848-61568867 | MS.gene056057:intron | 15.0% |
| !!! | TTTGATTTTATTTGTTTTTC+AGG | + | chr1.1:61568197-61568216 | MS.gene056057:intron | 15.0% |
| !!! | TTTTCAATGTATATTCATTA+TGG | + | chr1.1:61569400-61569419 | MS.gene056057:intron | 15.0% |
| !!! | TTTTTAAAGAATAAGTTACT+TGG | + | chr1.1:61567073-61567092 | MS.gene056057:intron | 15.0% |
| !! | AAAAATGATGTAAAGAAATC+TGG | - | chr1.1:61570545-61570564 | None:intergenic | 20.0% |
| !! | AAACTATGGTAAAATTTCAA+AGG | + | chr1.1:61570457-61570476 | MS.gene056057:intron | 20.0% |
| !! | AATCAAACATTACAAATCAA+AGG | - | chr1.1:61572202-61572221 | None:intergenic | 20.0% |
| !! | ATCAAACATTACAAATCAAA+GGG | - | chr1.1:61572201-61572220 | None:intergenic | 20.0% |
| !! | ATGAAAAATCTGAGAATTAT+AGG | + | chr1.1:61572077-61572096 | MS.gene056057:CDS | 20.0% |
| !! | CATTACATTATATTCATGTA+AGG | + | chr1.1:61572166-61572185 | MS.gene056057:intron | 20.0% |
| !! | GGTTTAAATTTATCAAAAGT+TGG | + | chr1.1:61571392-61571411 | MS.gene056057:intron | 20.0% |
| !! | GTCAAAATTTACATATTTCT+TGG | - | chr1.1:61572137-61572156 | None:intergenic | 20.0% |
| !! | TATGTAAAACTATATGCATT+AGG | + | chr1.1:61568973-61568992 | MS.gene056057:intron | 20.0% |
| !!! | ATGAAATATATGGATTACTT+AGG | - | chr1.1:61571252-61571271 | None:intergenic | 20.0% |
| !!! | GAATTGGTAAATTTTTATAC+AGG | + | chr1.1:61569109-61569128 | MS.gene056057:intron | 20.0% |
| !!! | GGACTAAATATCATTTTAAA+AGG | - | chr1.1:61568897-61568916 | None:intergenic | 20.0% |
| !!! | GTTAAAAGAGTTTACTTTTT+AGG | - | chr1.1:61568016-61568035 | None:intergenic | 20.0% |
| !!! | GTTTATCTTTTGTATTTTCA+AGG | + | chr1.1:61571746-61571765 | MS.gene056057:intron | 20.0% |
| !!! | GTTTGTTGAAATTTCTTTTA+TGG | + | chr1.1:61569469-61569488 | MS.gene056057:CDS | 20.0% |
| !!! | TAGTGAAATTTTGAAACAAT+GGG | + | chr1.1:61568591-61568610 | MS.gene056057:intron | 20.0% |
| !!! | TCATTTGTTGATTCAAATTA+TGG | + | chr1.1:61566901-61566920 | MS.gene056057:intron | 20.0% |
| !!! | TGTCTCTTTAATGATTTTAA+TGG | + | chr1.1:61570686-61570705 | MS.gene056057:intron | 20.0% |
| !!! | TTAGTGAAATTTTGAAACAA+TGG | + | chr1.1:61568590-61568609 | MS.gene056057:intron | 20.0% |
| !!! | TTTTACCTTTTTCATTTTGA+AGG | + | chr1.1:61569597-61569616 | MS.gene056057:intron | 20.0% |
| !!! | TTTTGATAAATTTAAACCGA+TGG | - | chr1.1:61571390-61571409 | None:intergenic | 20.0% |
| ! | AAAAATAATAGAAGCTAACC+TGG | - | chr1.1:61570620-61570639 | None:intergenic | 25.0% |
| ! | AAAACCTGAAAAGATATTGT+TGG | - | chr1.1:61567687-61567706 | None:intergenic | 25.0% |
| ! | AAAATTGAGATTGACATTCT+AGG | - | chr1.1:61568830-61568849 | None:intergenic | 25.0% |
| ! | AAACCATAAGAAATTTGGAA+AGG | - | chr1.1:61569299-61569318 | None:intergenic | 25.0% |
| ! | AAACCTGATGTTAGATAAAA+AGG | - | chr1.1:61571037-61571056 | None:intergenic | 25.0% |
| ! | AAAGCTATGAAACTGTTATA+AGG | - | chr1.1:61571418-61571437 | None:intergenic | 25.0% |
| ! | AAAGTCCTTCAAAATGAAAA+AGG | - | chr1.1:61569605-61569624 | None:intergenic | 25.0% |
| ! | AAGGAAAATATCGATAAGTA+AGG | + | chr1.1:61571836-61571855 | MS.gene056057:intron | 25.0% |
| ! | AAGTTATTGTCAAGTCAAAT+AGG | + | chr1.1:61570366-61570385 | MS.gene056057:CDS | 25.0% |
| ! | AATAAGAGAAACTGTGAAAT+TGG | - | chr1.1:61571813-61571832 | None:intergenic | 25.0% |
| ! | AGATATACACCTATGTATTT+AGG | + | chr1.1:61570098-61570117 | MS.gene056057:intron | 25.0% |
| ! | ATAAAAATTCATGTTCAGTG+AGG | + | chr1.1:61567181-61567200 | MS.gene056057:intron | 25.0% |
| ! | ATGTGTGTCATATATATGTT+TGG | + | chr1.1:61571166-61571185 | MS.gene056057:intron | 25.0% |
| ! | ATGTTAGATAAAAAGGATTG+AGG | - | chr1.1:61571030-61571049 | None:intergenic | 25.0% |
| ! | CTATGTATTATGTGCATAAA+AGG | + | chr1.1:61569848-61569867 | MS.gene056057:intron | 25.0% |
| ! | GAATTTCAAACTTTGTTCAA+TGG | - | chr1.1:61570148-61570167 | None:intergenic | 25.0% |
| ! | GAGATATTATGTATGATCTT+AGG | + | chr1.1:61568653-61568672 | MS.gene056057:intron | 25.0% |
| ! | GATATTTATGAGTTTAGATG+TGG | + | chr1.1:61570481-61570500 | MS.gene056057:intron | 25.0% |
| ! | GTAATGTTTGATTGTATTCT+AGG | + | chr1.1:61572209-61572228 | MS.gene056057:intron | 25.0% |
| ! | GTTCTCATGATATTCATAAA+TGG | + | chr1.1:61568342-61568361 | MS.gene056057:intron | 25.0% |
| ! | TAAAGAAATCTGGAAAATGA+AGG | - | chr1.1:61570535-61570554 | None:intergenic | 25.0% |
| ! | TAACCTTTCCAAATTTCTTA+TGG | + | chr1.1:61569293-61569312 | MS.gene056057:intron | 25.0% |
| ! | TAAGAACCCTCTTTAATAAA+GGG | - | chr1.1:61568246-61568265 | None:intergenic | 25.0% |
| ! | TCGTTTATAGCTATCAATAA+GGG | - | chr1.1:61569255-61569274 | None:intergenic | 25.0% |
| ! | TTAGCAGTGAAAATATAGTT+TGG | - | chr1.1:61571507-61571526 | None:intergenic | 25.0% |
| ! | TTCAATGTAAAGCAAAACAA+TGG | - | chr1.1:61568170-61568189 | None:intergenic | 25.0% |
| ! | TTTATCTAACATCAGGTTTA+TGG | + | chr1.1:61571038-61571057 | MS.gene056057:intron | 25.0% |
| ! | TTTATGATATTGAAATGCCT+TGG | + | chr1.1:61569639-61569658 | MS.gene056057:intron | 25.0% |
| !! | AAAGTAAACTCTTTTAACCA+TGG | + | chr1.1:61568018-61568037 | MS.gene056057:intron | 25.0% |
| !! | AATCCTTTTTATCTAACATC+AGG | + | chr1.1:61571031-61571050 | MS.gene056057:intron | 25.0% |
| !! | ATAACTTGTAAATCTTCAAG+AGG | - | chr1.1:61567241-61567260 | None:intergenic | 25.0% |
| !! | ATGAATTTTACATCATGCTT+TGG | + | chr1.1:61571868-61571887 | MS.gene056057:intron | 25.0% |
| !! | GAAGTATTATGTATGTTCTT+TGG | + | chr1.1:61568622-61568641 | MS.gene056057:intron | 25.0% |
| !! | GTAAAGAAAGCACATATTTA+TGG | - | chr1.1:61567371-61567390 | None:intergenic | 25.0% |
| !! | TAACTTGTAAATCTTCAAGA+GGG | - | chr1.1:61567240-61567259 | None:intergenic | 25.0% |
| !! | TTCATGATTATTTTCACTCA+TGG | - | chr1.1:61570348-61570367 | None:intergenic | 25.0% |
| !! | TTCTGTGATTTTTATTGTGT+AGG | + | chr1.1:61568055-61568074 | MS.gene056057:intron | 25.0% |
| !! | TTTTCCTGCATAATTCTATT+AGG | + | chr1.1:61569500-61569519 | MS.gene056057:CDS | 25.0% |
| !!! | AAGTTACTTGGTTTTCATTT+TGG | + | chr1.1:61567085-61567104 | MS.gene056057:intron | 25.0% |
| !!! | ACATTATTTGCTAATTTGCT+AGG | + | chr1.1:61571544-61571563 | MS.gene056057:intron | 25.0% |
| !!! | AGAAAATCAATCATTTTTGC+AGG | - | chr1.1:61567711-61567730 | None:intergenic | 25.0% |
| !!! | ATGTAAATTTTGACGTCAAA+TGG | + | chr1.1:61572143-61572162 | MS.gene056057:intron | 25.0% |
| !!! | GGTTAGCTTCTATTATTTTT+TGG | + | chr1.1:61570620-61570639 | MS.gene056057:intron | 25.0% |
| !!! | GTTTACTTTTTAGGTTGAAA+TGG | - | chr1.1:61568007-61568026 | None:intergenic | 25.0% |
| !!! | TTCAAGTTGAAAAGAAGAAT+GGG | + | chr1.1:61571663-61571682 | MS.gene056057:intron | 25.0% |
| !!! | TTTCTTTACATCATTTTTGC+AGG | + | chr1.1:61570547-61570566 | MS.gene056057:intron | 25.0% |
| !!! | TTTCTTTTTAGTATGCTCTA+GGG | + | chr1.1:61571309-61571328 | MS.gene056057:intron | 25.0% |
| !!! | TTTGTTTTTCAGGTTTATGA+AGG | + | chr1.1:61568207-61568226 | MS.gene056057:intron | 25.0% |
| AAAACTCAGGTTTGTATTGA+AGG | + | chr1.1:61570217-61570236 | MS.gene056057:intron | 30.0% | |
| AAACTCAGGTTTGTATTGAA+GGG | + | chr1.1:61570218-61570237 | MS.gene056057:intron | 30.0% | |
| AAGAACCAGCATATTGTAAA+CGG | - | chr1.1:61570755-61570774 | None:intergenic | 30.0% | |
| AATATATGTGCAATGGAGTA+TGG | + | chr1.1:61567113-61567132 | MS.gene056057:intron | 30.0% | |
| AATCCATATATTTCATCCAG+TGG | + | chr1.1:61571256-61571275 | MS.gene056057:intron | 30.0% | |
| AATGATATTTAGTCCTGTTC+CGG | + | chr1.1:61568902-61568921 | MS.gene056057:intron | 30.0% | |
| ACAACTCTACTTGGTAAAAA+AGG | + | chr1.1:61567389-61567408 | MS.gene056057:intron | 30.0% | |
| ACACACACATATAAACAAAG+CGG | - | chr1.1:61571213-61571232 | None:intergenic | 30.0% | |
| ACACGTTCATTATCATTTGT+AGG | + | chr1.1:61568447-61568466 | MS.gene056057:intron | 30.0% | |
| ACCATAGTTTCAATTTCTTC+AGG | - | chr1.1:61570447-61570466 | None:intergenic | 30.0% | |
| ACCTGAAGAAATTGAAACTA+TGG | + | chr1.1:61570443-61570462 | MS.gene056057:intron | 30.0% | |
| ACGCTGTTAAAATTGTTGAA+GGG | - | chr1.1:61567019-61567038 | None:intergenic | 30.0% | |
| ATACACCTATGTATTTAGGT+AGG | + | chr1.1:61570102-61570121 | MS.gene056057:intron | 30.0% | |
| ATGAGCAATGAGTGATAAAT+TGG | - | chr1.1:61571471-61571490 | None:intergenic | 30.0% | |
| CATAATCTAGCTACAGAATA+TGG | - | chr1.1:61569046-61569065 | None:intergenic | 30.0% | |
| CTGGAATTTGAAGACATATA+TGG | + | chr1.1:61570956-61570975 | MS.gene056057:CDS | 30.0% | |
| GAATTAAATCAAACTCTCCA+TGG | - | chr1.1:61568038-61568057 | None:intergenic | 30.0% | |
| GATTTCTACAAATAAGCTTG+AGG | + | chr1.1:61568792-61568811 | MS.gene056057:CDS | 30.0% | |
| GGTTGAAAATATATGTGCAA+TGG | + | chr1.1:61567106-61567125 | MS.gene056057:intron | 30.0% | |
| GTAAAACTATATGCATTAGG+TGG | + | chr1.1:61568976-61568995 | MS.gene056057:intron | 30.0% | |
| GTAAGAACCCTCTTTAATAA+AGG | - | chr1.1:61568247-61568266 | None:intergenic | 30.0% | |
| GTCGTTTATAGCTATCAATA+AGG | - | chr1.1:61569256-61569275 | None:intergenic | 30.0% | |
| GTTCCTATGAATTGATTACA+GGG | + | chr1.1:61569422-61569441 | MS.gene056057:intron | 30.0% | |
| GTTTCTTTGTAGATGATCTT+AGG | + | chr1.1:61570661-61570680 | MS.gene056057:intron | 30.0% | |
| TATGTATGATCTTAGGATGA+TGG | + | chr1.1:61568660-61568679 | MS.gene056057:intron | 30.0% | |
| TCTGTAGCTAGATTATGAAT+TGG | + | chr1.1:61569049-61569068 | MS.gene056057:intron | 30.0% | |
| TGGAACATAAAGTCAGAATT+TGG | - | chr1.1:61567217-61567236 | None:intergenic | 30.0% | |
| TTACACCAAGAAAAAAACTC+AGG | + | chr1.1:61570204-61570223 | MS.gene056057:CDS | 30.0% | |
| TTATTGACGATAGTTATCTG+TGG | + | chr1.1:61568751-61568770 | MS.gene056057:CDS | 30.0% | |
| TTATTGTGTAGGTATGAAGA+GGG | + | chr1.1:61568066-61568085 | MS.gene056057:intron | 30.0% | |
| TTATTTAGTGGGATTGAAAG+TGG | - | chr1.1:61569783-61569802 | None:intergenic | 30.0% | |
| TTTATTGTGTAGGTATGAAG+AGG | + | chr1.1:61568065-61568084 | MS.gene056057:intron | 30.0% | |
| TTTCAGGGATTAAGAATCAA+GGG | + | chr1.1:61570302-61570321 | MS.gene056057:intron | 30.0% | |
| TTTCCCTGTAATCAATTCAT+AGG | - | chr1.1:61569428-61569447 | None:intergenic | 30.0% | |
| ! | AAGTCCAACAATATCTTTTC+AGG | + | chr1.1:61567680-61567699 | MS.gene056057:intron | 30.0% |
| ! | ATGACTGAAGTATTACAAGT+TGG | + | chr1.1:61569077-61569096 | MS.gene056057:intron | 30.0% |
| ! | ATGATGATGATAATGATGCA+TGG | + | chr1.1:61569447-61569466 | MS.gene056057:CDS | 30.0% |
| ! | ATTGATAGCTATAAACGACT+TGG | + | chr1.1:61569257-61569276 | MS.gene056057:intron | 30.0% |
| ! | CAAATGATAATGAACGTGTT+AGG | - | chr1.1:61568446-61568465 | None:intergenic | 30.0% |
| ! | CTTCTTTTCAACTTGAACAA+TGG | - | chr1.1:61571660-61571679 | None:intergenic | 30.0% |
| ! | GAACAAAGTTTGAAATTCAG+TGG | + | chr1.1:61570150-61570169 | MS.gene056057:intron | 30.0% |
| ! | GCATTTTCTGTCAAATTTGA+GGG | + | chr1.1:61569870-61569889 | MS.gene056057:intron | 30.0% |
| ! | GTATTCTAGGAGAATTTGAT+TGG | + | chr1.1:61572222-61572241 | MS.gene056057:intron | 30.0% |
| ! | TGACATTCAATTGATTCTCT+TGG | + | chr1.1:61567271-61567290 | MS.gene056057:intron | 30.0% |
| ! | TGATCTCTTGCAAATTTTCA+GGG | + | chr1.1:61570287-61570306 | MS.gene056057:intron | 30.0% |
| !! | AAGTTGGTCTTATGATGAAT+TGG | + | chr1.1:61569093-61569112 | MS.gene056057:intron | 30.0% |
| !! | ATATTTTTGTGGGGGAATAA+GGG | + | chr1.1:61568548-61568567 | MS.gene056057:intron | 30.0% |
| !! | GATTAGTTCTGATTGCTTTA+GGG | + | chr1.1:61567493-61567512 | MS.gene056057:intron | 30.0% |
| !! | GTTCAAGTTGAAAAGAAGAA+TGG | + | chr1.1:61571662-61571681 | MS.gene056057:intron | 30.0% |
| !! | GTTTCTTTTTAGTATGCTCT+AGG | + | chr1.1:61571308-61571327 | MS.gene056057:intron | 30.0% |
| !! | TATCGTCTCGATATTTTTGT+GGG | + | chr1.1:61568538-61568557 | MS.gene056057:intron | 30.0% |
| !! | TCTGGTTTGAGATTTTTCTT+GGG | + | chr1.1:61567649-61567668 | MS.gene056057:intron | 30.0% |
| !! | TGATATTGCTTTTGTTGGAA+AGG | + | chr1.1:61570929-61570948 | MS.gene056057:CDS | 30.0% |
| !! | TTTTCAGGGATTAAGAATCA+AGG | + | chr1.1:61570301-61570320 | MS.gene056057:intron | 30.0% |
| !!! | ACAAACCTGAGTTTTTTTCT+TGG | - | chr1.1:61570212-61570231 | None:intergenic | 30.0% |
| !!! | ATGGTCATTTTTTGTTGATG+TGG | + | chr1.1:61567471-61567490 | MS.gene056057:intron | 30.0% |
| !!! | TGAGTTTTTTTCTTGGTGTA+AGG | - | chr1.1:61570205-61570224 | None:intergenic | 30.0% |
| AAAAAAGGTCAATCCGAAGT+TGG | + | chr1.1:61567404-61567423 | MS.gene056057:intron | 35.0% | |
| AAGCCTTTGCATTATCAGTA+TGG | + | chr1.1:61567439-61567458 | MS.gene056057:intron | 35.0% | |
| ACACTTTGTATAGACACCAT+CGG | + | chr1.1:61571371-61571390 | MS.gene056057:intron | 35.0% | |
| ATAGCTGGTCATACTAACTA+TGG | - | chr1.1:61569739-61569758 | None:intergenic | 35.0% | |
| ATATTGTAAACGGAATGAGC+TGG | - | chr1.1:61570745-61570764 | None:intergenic | 35.0% | |
| ATCAGTATGGACAACATCAA+TGG | + | chr1.1:61567452-61567471 | MS.gene056057:intron | 35.0% | |
| ATGATATTTAGTCCTGTTCC+GGG | + | chr1.1:61568903-61568922 | MS.gene056057:intron | 35.0% | |
| CAACATTATGTAGTCGTCAA+GGG | - | chr1.1:61571615-61571634 | None:intergenic | 35.0% | |
| CAAGAAAAATCTCAAACCAG+AGG | - | chr1.1:61567650-61567669 | None:intergenic | 35.0% | |
| CAATACAATGACTCTTCCAA+AGG | + | chr1.1:61572031-61572050 | MS.gene056057:CDS | 35.0% | |
| CACAGTTTCTCTTATTGTGA+AGG | + | chr1.1:61571817-61571836 | MS.gene056057:intron | 35.0% | |
| CACGCTGTTAAAATTGTTGA+AGG | - | chr1.1:61567020-61567039 | None:intergenic | 35.0% | |
| CACTAAATAAGTGCAACCAT+GGG | + | chr1.1:61569793-61569812 | MS.gene056057:intron | 35.0% | |
| CATGGTTGCACTTATTTAGT+GGG | - | chr1.1:61569794-61569813 | None:intergenic | 35.0% | |
| CCTGTTTACAACTCATTCTA+GGG | + | chr1.1:61567970-61567989 | MS.gene056057:intron | 35.0% | |
| CGCTGTTAAAATTGTTGAAG+GGG | - | chr1.1:61567018-61567037 | None:intergenic | 35.0% | |
| CGTTCATTATCATTTGTAGG+TGG | + | chr1.1:61568450-61568469 | MS.gene056057:intron | 35.0% | |
| GACTTAAGAATTACCTCAGT+TGG | - | chr1.1:61567328-61567347 | None:intergenic | 35.0% | |
| GAGTCATTGTATTGTTCTTG+AGG | - | chr1.1:61572025-61572044 | None:intergenic | 35.0% | |
| GATAAATTGGATTACTGCCT+TGG | - | chr1.1:61571458-61571477 | None:intergenic | 35.0% | |
| GCATTCCTACCTAAATACAT+AGG | - | chr1.1:61570110-61570129 | None:intergenic | 35.0% | |
| GCTTTCTTTACAACTCTACT+TGG | + | chr1.1:61567380-61567399 | MS.gene056057:intron | 35.0% | |
| GGGAAACAAATCTCATTTGA+AGG | + | chr1.1:61570322-61570341 | MS.gene056057:CDS | 35.0% | |
| GGTACCTAATAGAATTATGC+AGG | - | chr1.1:61569507-61569526 | None:intergenic | 35.0% | |
| GGTTCCTATGAATTGATTAC+AGG | + | chr1.1:61569421-61569440 | MS.gene056057:intron | 35.0% | |
| TAAGAGATTCGACATTCACA+TGG | + | chr1.1:61568507-61568526 | MS.gene056057:CDS | 35.0% | |
| TACTCTTTAGCAAAACACGT+TGG | - | chr1.1:61571584-61571603 | None:intergenic | 35.0% | |
| TAGGAGAATTTGATTGGACT+TGG | + | chr1.1:61572228-61572247 | MS.gene056057:intron | 35.0% | |
| TATAGCTATCAATAAGGGCA+TGG | - | chr1.1:61569250-61569269 | None:intergenic | 35.0% | |
| TATTTCATCCAGTGGACATT+TGG | + | chr1.1:61571264-61571283 | MS.gene056057:intron | 35.0% | |
| TCATTCCGTTTACAATATGC+TGG | + | chr1.1:61570747-61570766 | MS.gene056057:intron | 35.0% | |
| TCCTCTCATCACAATGATAT+TGG | - | chr1.1:61571716-61571735 | None:intergenic | 35.0% | |
| TGTCCACTGGATGAAATATA+TGG | - | chr1.1:61571262-61571281 | None:intergenic | 35.0% | |
| TTGATTGGACTTGGATTCTT+TGG | + | chr1.1:61572237-61572256 | MS.gene056057:CDS | 35.0% | |
| TTGTAGTTCTTGGAGGTTTA+TGG | + | chr1.1:61571996-61572015 | MS.gene056057:CDS | 35.0% | |
| TTTATGAAGGAAACCAAGGT+TGG | + | chr1.1:61568220-61568239 | MS.gene056057:CDS | 35.0% | |
| ! | AACCGAAGCATTATAAAGAG+AGG | + | chr1.1:61569713-61569732 | MS.gene056057:intron | 35.0% |
| ! | ACGTGTTTTGCTAAAGAGTA+TGG | + | chr1.1:61571584-61571603 | MS.gene056057:CDS | 35.0% |
| ! | CAAAGTGTTTACCTATAAGC+AGG | - | chr1.1:61571359-61571378 | None:intergenic | 35.0% |
| ! | GACTTGGATTCTTTGGTAAT+TGG | + | chr1.1:61572244-61572263 | MS.gene056057:CDS | 35.0% |
| ! | GCAATTTTTGACACAATGCA+GGG | + | chr1.1:61567530-61567549 | MS.gene056057:intron | 35.0% |
| ! | GGCATTTTCTGTCAAATTTG+AGG | + | chr1.1:61569869-61569888 | MS.gene056057:intron | 35.0% |
| ! | GGTTGAATTTGAAATCGCAT+TGG | + | chr1.1:61571059-61571078 | MS.gene056057:intron | 35.0% |
| ! | GTGATCTCTTGCAAATTTTC+AGG | + | chr1.1:61570286-61570305 | MS.gene056057:intron | 35.0% |
| ! | TCAGTGGTTATGTATTTTGC+AGG | + | chr1.1:61570166-61570185 | MS.gene056057:intron | 35.0% |
| ! | TGTCCATACTGATAATGCAA+AGG | - | chr1.1:61567445-61567464 | None:intergenic | 35.0% |
| ! | TTTTTATACAGGGTTCTCAG+TGG | + | chr1.1:61569120-61569139 | MS.gene056057:intron | 35.0% |
| !! | ATCGTCTCGATATTTTTGTG+GGG | + | chr1.1:61568539-61568558 | MS.gene056057:intron | 35.0% |
| !! | CTATCGTCTCGATATTTTTG+TGG | + | chr1.1:61568537-61568556 | MS.gene056057:intron | 35.0% |
| !! | CTCTGGTTTGAGATTTTTCT+TGG | + | chr1.1:61567648-61567667 | MS.gene056057:intron | 35.0% |
| !! | CTGGTTTGAGATTTTTCTTG+GGG | + | chr1.1:61567650-61567669 | MS.gene056057:intron | 35.0% |
| !! | CTTTAGGGATGCTTTCATTT+TGG | + | chr1.1:61567508-61567527 | MS.gene056057:intron | 35.0% |
| !! | GATATTTTTGTGGGGGAATA+AGG | + | chr1.1:61568547-61568566 | MS.gene056057:intron | 35.0% |
| !! | GGATTAGTTCTGATTGCTTT+AGG | + | chr1.1:61567492-61567511 | MS.gene056057:intron | 35.0% |
| !! | GGTGATGATATTGCTTTTGT+TGG | + | chr1.1:61570924-61570943 | MS.gene056057:CDS | 35.0% |
| !! | TTACAGGTCCTGCTTTTATA+TGG | + | chr1.1:61568864-61568883 | MS.gene056057:intron | 35.0% |
| !! | TTTGCTAATTTGCTAGGACA+AGG | + | chr1.1:61571550-61571569 | MS.gene056057:intron | 35.0% |
| !! | TTTTGCTAAAGAGTATGGTG+TGG | + | chr1.1:61571589-61571608 | MS.gene056057:CDS | 35.0% |
| AAAAGGATTGAGGTTCTCAG+TGG | - | chr1.1:61571020-61571039 | None:intergenic | 40.0% | |
| AAATGCCTTGGAGCTGATTA+TGG | + | chr1.1:61569651-61569670 | MS.gene056057:intron | 40.0% | |
| AATTGCAACCAAATGTCCAC+TGG | - | chr1.1:61571275-61571294 | None:intergenic | 40.0% | |
| AGAGTACACATCAGCAACAA+AGG | - | chr1.1:61570415-61570434 | None:intergenic | 40.0% | |
| AGGTTGCGAGATTATATGAG+TGG | + | chr1.1:61570567-61570586 | MS.gene056057:intron | 40.0% | |
| AGTAAACTCTGCCACTGAAA+TGG | - | chr1.1:61567599-61567618 | None:intergenic | 40.0% | |
| ATACTTTGAGCACAAGGTTG+TGG | + | chr1.1:61566977-61566996 | MS.gene056057:intron | 40.0% | |
| CAGGTTTATGAAGGAAACCA+AGG | + | chr1.1:61568216-61568235 | MS.gene056057:intron | 40.0% | |
| CCACTAAATAAGTGCAACCA+TGG | + | chr1.1:61569792-61569811 | MS.gene056057:intron | 40.0% | |
| CCATGGTTGCACTTATTTAG+TGG | - | chr1.1:61569795-61569814 | None:intergenic | 40.0% | |
| CCCTAGAATGAGTTGTAAAC+AGG | - | chr1.1:61567973-61567992 | None:intergenic | 40.0% | |
| CTGACAGTTTCGACACAATT+AGG | + | chr1.1:61566816-61566835 | MS.gene056057:CDS | 40.0% | |
| CTTGTAAATCTTCAAGAGGG+TGG | - | chr1.1:61567237-61567256 | None:intergenic | 40.0% | |
| CTTTAATAAAGGGCCAACCT+TGG | - | chr1.1:61568236-61568255 | None:intergenic | 40.0% | |
| GATCACTCTGTTGTAGTTCT+TGG | + | chr1.1:61571986-61572005 | MS.gene056057:CDS | 40.0% | |
| GATTCGACAAAGTCTTACGT+TGG | - | chr1.1:61569998-61570017 | None:intergenic | 40.0% | |
| GCAACATTATGTAGTCGTCA+AGG | - | chr1.1:61571616-61571635 | None:intergenic | 40.0% | |
| GCCAATATCATTGTGATGAG+AGG | + | chr1.1:61571712-61571731 | MS.gene056057:intron | 40.0% | |
| GCCTGTTTACAACTCATTCT+AGG | + | chr1.1:61567969-61567988 | MS.gene056057:intron | 40.0% | |
| GGCCTCTCTTTATAATGCTT+CGG | - | chr1.1:61569718-61569737 | None:intergenic | 40.0% | |
| GGGATCAACCATATAAAAGC+AGG | - | chr1.1:61568875-61568894 | None:intergenic | 40.0% | |
| GGTTGCGAGATTATATGAGT+GGG | + | chr1.1:61570568-61570587 | MS.gene056057:intron | 40.0% | |
| TAGTTTCATCGCCTGCTTAT+AGG | + | chr1.1:61571345-61571364 | MS.gene056057:intron | 40.0% | |
| TCACATTCAAAACTGTCCCA+TGG | - | chr1.1:61569812-61569831 | None:intergenic | 40.0% | |
| TCATCACCAATATGCTGAGA+TGG | - | chr1.1:61570912-61570931 | None:intergenic | 40.0% | |
| TCTGTCAATTCAACAACCTC+TGG | + | chr1.1:61567631-61567650 | MS.gene056057:intron | 40.0% | |
| TGGACTATACTTTGAGCACA+AGG | + | chr1.1:61566971-61566990 | MS.gene056057:intron | 40.0% | |
| TGTTGAATTGACAGACTCAC+CGG | - | chr1.1:61567626-61567645 | None:intergenic | 40.0% | |
| TTAGATGCAGCATGTAACTG+AGG | - | chr1.1:61568490-61568509 | None:intergenic | 40.0% | |
| TTCAGCGCAAAACTTCAGTT+TGG | - | chr1.1:61568397-61568416 | None:intergenic | 40.0% | |
| TTTCCACCATCTCAGCATAT+TGG | + | chr1.1:61570903-61570922 | MS.gene056057:CDS | 40.0% | |
| ! | AGATTGTTCTGAACCAACTG+AGG | + | chr1.1:61567312-61567331 | MS.gene056057:intron | 40.0% |
| ! | AGGTTGGCCCTTTATTAAAG+AGG | + | chr1.1:61568236-61568255 | MS.gene056057:CDS | 40.0% |
| ! | CATAGCTTTGCTTTGTATGC+TGG | + | chr1.1:61571429-61571448 | MS.gene056057:intron | 40.0% |
| ! | CTATCAATAAGGGCATGGTT+TGG | - | chr1.1:61569245-61569264 | None:intergenic | 40.0% |
| ! | CTTTTGTTGGAAAGGACATC+TGG | + | chr1.1:61570937-61570956 | MS.gene056057:CDS | 40.0% |
| ! | GGCAATTTTTGACACAATGC+AGG | + | chr1.1:61567529-61567548 | MS.gene056057:intron | 40.0% |
| ! | GGTTGGCCCTTTATTAAAGA+GGG | + | chr1.1:61568237-61568256 | MS.gene056057:CDS | 40.0% |
| ! | GTTTTCCATGCTATCACCTT+TGG | - | chr1.1:61572050-61572069 | None:intergenic | 40.0% |
| ! | TTTTGTAGCATCAGAGAGCA+TGG | + | chr1.1:61568698-61568717 | MS.gene056057:intron | 40.0% |
| !! | AGAAATACCGACTTCATACG+CGG | + | chr1.1:61571939-61571958 | MS.gene056057:intron | 40.0% |
| !! | ATGAGTGGGTTGTGTTATGA+GGG | + | chr1.1:61570582-61570601 | MS.gene056057:CDS | 40.0% |
| !! | TAATTTGCTAGGACAAGGCA+AGG | + | chr1.1:61571555-61571574 | MS.gene056057:intron | 40.0% |
| !! | TATGAGTGGGTTGTGTTATG+AGG | + | chr1.1:61570581-61570600 | MS.gene056057:CDS | 40.0% |
| !! | TCGTCTCGATATTTTTGTGG+GGG | + | chr1.1:61568540-61568559 | MS.gene056057:intron | 40.0% |
| !! | TGTTGATTCGTCCATTTCAG+TGG | + | chr1.1:61567585-61567604 | MS.gene056057:CDS | 40.0% |
| AAATGACATGCACACACTGC+GGG | - | chr1.1:61568949-61568968 | None:intergenic | 45.0% | |
| AACTGTCAGTTGCGTTTCAG+AGG | - | chr1.1:61566805-61566824 | None:intergenic | 45.0% | |
| CAAATGACATGCACACACTG+CGG | - | chr1.1:61568950-61568969 | None:intergenic | 45.0% | |
| CACTCTGTTGTAGTTCTTGG+AGG | + | chr1.1:61571989-61572008 | MS.gene056057:CDS | 45.0% | |
| CTCTTCCAAAGGTGATAGCA+TGG | + | chr1.1:61572042-61572061 | MS.gene056057:CDS | 45.0% | |
| GAAACTGTTGAGGAGCTTCT+TGG | + | chr1.1:61568094-61568113 | MS.gene056057:CDS | 45.0% | |
| GAGGGTTAGAGAAACTGTTG+AGG | + | chr1.1:61568084-61568103 | MS.gene056057:CDS | 45.0% | |
| GCTTTGTATGCTGGATACCA+AGG | + | chr1.1:61571438-61571457 | MS.gene056057:intron | 45.0% | |
| GTTGAATTGACAGACTCACC+GGG | - | chr1.1:61567625-61567644 | None:intergenic | 45.0% | |
| TCACCAATATGCTGAGATGG+TGG | - | chr1.1:61570909-61570928 | None:intergenic | 45.0% | |
| TGAGGGCAACTTACATATCC+AGG | + | chr1.1:61570599-61570618 | MS.gene056057:CDS | 45.0% | |
| TTCTCAGTAGCTGCCAACTT+CGG | - | chr1.1:61567420-61567439 | None:intergenic | 45.0% | |
| TTTCGCCATAATCAGCTCCA+AGG | - | chr1.1:61569659-61569678 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr1.1:61570039-61570058 | None:intergenic | 45.0% |
| ! | ACAATGGTGACGTTTCGCTT+CGG | - | chr1.1:61571644-61571663 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr1.1:61570040-61570059 | None:intergenic | 45.0% |
| !! | GAGCATGGAAGGCTTTGAAT+TGG | + | chr1.1:61568713-61568732 | MS.gene056057:CDS | 45.0% |
| !!! | TTTTTTAAATTCTATTTAAA+AGG | - | chr1.1:61567885-61567904 | None:intergenic | 5.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr1.1:61570038-61570057 | MS.gene056057:intron | 50.0% | |
| CGCAGTGTGTGCATGTCATT+TGG | + | chr1.1:61568948-61568967 | MS.gene056057:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1.1:61570035-61570054 | None:intergenic | 50.0% | |
| GAACTCTCCGCGTATGAAGT+CGG | - | chr1.1:61571949-61571968 | None:intergenic | 50.0% | |
| GAGATCCTAGAAGCTCTACC+CGG | - | chr1.1:61568924-61568943 | None:intergenic | 50.0% | |
| TGATCAGTACCACTTGCAGC+TGG | - | chr1.1:61571971-61571990 | None:intergenic | 50.0% | |
| TGCATCTGAACTCGCATAGC+TGG | - | chr1.1:61569754-61569773 | None:intergenic | 50.0% | |
| ! | AAGTCTTACGTTGGCTGTCG+AGG | - | chr1.1:61569989-61570008 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr1.1:61570041-61570060 | None:intergenic | 50.0% |
| ! | GTAGCATCAGAGAGCATGGA+AGG | + | chr1.1:61568702-61568721 | MS.gene056057:intron | 50.0% |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1.1:61570026-61570045 | MS.gene056057:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1.1:61570033-61570052 | MS.gene056057:intron | 55.0% | |
| CTAGAAGCTCTACCCGGAAC+AGG | - | chr1.1:61568918-61568937 | None:intergenic | 55.0% | |
| CTGTTCCGGGTAGAGCTTCT+AGG | + | chr1.1:61568916-61568935 | MS.gene056057:intron | 55.0% | |
| GTGGCAGAGTTTACTGCTCC+CGG | + | chr1.1:61567604-61567623 | MS.gene056057:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1.1:61570027-61570046 | MS.gene056057:intron | 55.0% | |
| CGGAGAGTTCCAGCTGCAAG+TGG | + | chr1.1:61571959-61571978 | MS.gene056057:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 61566783 | 61572269 | 61566783 | ID=MS.gene056057 |
| chr1.1 | mRNA | 61566783 | 61572269 | 61566783 | ID=MS.gene056057.t1;Parent=MS.gene056057 |
| chr1.1 | exon | 61566783 | 61566837 | 61566783 | ID=MS.gene056057.t1.exon1;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61566783 | 61566837 | 61566783 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61567551 | 61567625 | 61567551 | ID=MS.gene056057.t1.exon2;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61567551 | 61567625 | 61567551 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61568077 | 61568117 | 61568077 | ID=MS.gene056057.t1.exon3;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61568077 | 61568117 | 61568077 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61568219 | 61568290 | 61568219 | ID=MS.gene056057.t1.exon4;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61568219 | 61568290 | 61568219 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61568469 | 61568528 | 61568469 | ID=MS.gene056057.t1.exon5;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61568469 | 61568528 | 61568469 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61568706 | 61568813 | 61568706 | ID=MS.gene056057.t1.exon6;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61568706 | 61568813 | 61568706 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61569443 | 61569521 | 61569443 | ID=MS.gene056057.t1.exon7;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61569443 | 61569521 | 61569443 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61570188 | 61570225 | 61570188 | ID=MS.gene056057.t1.exon8;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61570188 | 61570225 | 61570188 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61570308 | 61570387 | 61570308 | ID=MS.gene056057.t1.exon9;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61570308 | 61570387 | 61570308 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61570569 | 61570620 | 61570569 | ID=MS.gene056057.t1.exon10;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61570569 | 61570620 | 61570569 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61570846 | 61570998 | 61570846 | ID=MS.gene056057.t1.exon11;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61570846 | 61570998 | 61570846 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61571566 | 61571667 | 61571566 | ID=MS.gene056057.t1.exon12;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61571566 | 61571667 | 61571566 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61571941 | 61572144 | 61571941 | ID=MS.gene056057.t1.exon13;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61571941 | 61572144 | 61571941 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| chr1.1 | exon | 61572231 | 61572269 | 61572231 | ID=MS.gene056057.t1.exon14;Parent=MS.gene056057.t1 |
| chr1.1 | CDS | 61572231 | 61572269 | 61572231 | ID=cds.MS.gene056057.t1;Parent=MS.gene056057.t1 |
| Gene Sequence |
| Protein sequence |
